Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004351

Physical Location & Seq

Genomic Coordinates Reverse (-)

57269637 .. 57272550

Gene Structure 2914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0439200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGAGTAGTGAGGTGACGGAAGTGAAATCGAACTCAATGACGGCAAGGAGGGCAGCAGATTCAGAAATCGAAGCTGCGGCAGCCGATATGTCAAGCCCAGCTGGTCCACCAAAAACGCCTAAGAGCCCTTTTGCTTCGCGTTTTATGAGTACTCCTCTTGCCAGCCCCATGAAAAAGGCCATTGTAAGCATGCAAGGCTACTTGGAAGAAGTTGGACACTTTACCAAGCTCGATCCTCAAGACTCCTGGCTACCCATCACCGAGTCGAGAAATGGTAATGCCTACTACTCGGCGTTTCACACGCTCAGTTCCGGAATCGGAGTTCAAGCCCTCCTCCTTCCGCTGTCTTTCACTGTTCTCGGTTGGGCATGGGGAATCATATGCCTCTCAGTGGCTTTCATGTGGCAGTTGTATACTCTGTGGTTACTGATACAGCTCCATGAATCGCAATCTGGGATGCGCTACAGCCGATACCTCCGCCTTTCCATGGCCGCTTTTGGTGAGAAACTAGGGAAGTTGCTGGCGCTGTTTCCAATCATGTACCTCTCCGGTGGCACGTGTGTGACCCTGATCATGATTGGTGGTGGAACCATGAAGATTTTTTACCAAATCGTTAGCGGTAATAATACAAGTCCTTTGACCATCCTGGAGTGGTACTTGGTGTTCACCGGCATGACCATTGTTCTTGCTCAGCTTCCTAACCTCAACTCCATTGCCGGGGTTTCGCTAATCGGAGCAATCACTGCTATAACTTACTGCACTCTCATTTGGATTGTTTCCATTACCAGAGATAGGCCAGCGGGTGTTAACTATGACTATCCATTTCTTCCTCCCCAAGCAAAATCTGATCCAGCTGCTTCGGTTTTTAGTATTCTCAATGCGCTTGGGATCACTGTCTTTGCTTTTAGAGGCCACAATCTTGTGCTCGAAATACAGGGGACTATGCCTTCAAGCACAAAGAGCCCTTCGCGTTTGCCAATGTGGAAAGGGGTGAAGTTTGCATATCTCATCATCGCAATGTGCTTGTTTCCCCTTGCAATTGGCGGCTACTGGGCTTATGGAAATTTGATACCATCAAACGGAGGAATGTTAAATGCCTTGAACGAGTATCATGGACACGATACGTCAAAATTTGTGCTAGGTTTTACGAGCCTGCTGGTTGTGGTTAACTGCCTAACCTCGTTTCAAATATATGCAATGCCGGTGTTTGACAATCTGGAATTCAGATATACTAGCTGCATGAACAAACCCTGTCCACGGTGGCTCCGCGCAGGGTTCAGGATTTTGTTTGGCTGCTTCGCCTGTTTTATTGCAGTGGCACTACCCTTCTTGCCAAGCTTGGCAGGGTTGATTGGAGGAGTTGCAGTACCAATCACATTAGCATATCCATGTTTCATGTGGGTACTTATAAAAAAACCTCCTAAACATATCGCAATTTTCAATTGGGTACTGGGATCCTTGGGGATAGTCCTTAGTATCTTGATTGTCACCGGAGCAATTTGGAATATAGTGACCATCGGAATAGAAGTTCACTTCTTCAAGCCTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 bHLH-MYC_N

Protein Analysis

516

Amino Acids

56.51

Weight (kDa)

9.04

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	91 - 503	8.5e-53	Transmembrane amino acid transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74580 AT1G74580 AT1G74580
fragaria_vesca	FvH4_5g15040
malus_domestica	MD06G1192500.v1.1
prunus_persica	Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1
pyrus_communis	pycom06g17060
rosa_chinensis	RchiOBHm_Chr7g0181161
rosa_laevigata	RLG00000005208
rosa_multiflora	Rmu_sc0001147.1_g000017 Rmu_sc0027076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272220
rosa_rugosa	Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0438800 Rorug06G0438800 Rorug06G0438900 Rorug06G0439000 Rorug06G0439100 Rorug06G0439200 Rorug06G0439300 Rorug06G0439400
rosa_samantha	Rh7AG040900 Rh7BG040300 Rh7CG042300 Rh7DG040700
rosa_wichuraiana	Rw7G003380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1409
AccI	GTMKAC	1 cut(s)	413
AccII	CGCG	3 cut(s)	139, 970, 1269
AccIII	TCCGGA	1 cut(s)	311
AciI	CCGC	8 cut(s)	77, 341, 478, 492, 618, 800, 1044, 1267
AclWI	GGATC	5 cut(s)	227, 842, 896, 1449, 1462
AcoI	YGGCCR	1 cut(s)	489
AcsI	RAATTY	3 cut(s)	1063, 1130, 1220
AcvI	CACGTG	1 cut(s)	558
AfaI	GTAC	6 cut(s)	151, 542, 656, 1368, 1404, 1449
AfiI	CCNNNNNNNGG	6 cut(s)	391, 487, 717, 792, 1079, 1257
AflIII	ACRYGT	1 cut(s)	557
AgsI	TTSAA	6 cut(s)	326, 951, 1102, 1187, 1441, 1540
AjnI	CCWGG	2 cut(s)	245, 645
AleI	CACNNNNGTG	1 cut(s)	560
AloI	GAACNNNNNNTCC	4 cut(s)	306, 338, 1512, 1544
AluBI	AGCT	8 cut(s)	74, 101, 229, 436, 694, 854, 1236, 1338
AluI	AGCT	8 cut(s)	74, 101, 229, 436, 694, 854, 1236, 1338
Alw21I	GWGCWC	1 cut(s)	927
AlwI	GGATC	5 cut(s)	227, 842, 896, 1449, 1462
Aor13HI	TCCGGA	1 cut(s)	311
AoxI	GGCC	4 cut(s)	177, 489, 794, 910
ApeKI	GCWGC	6 cut(s)	53, 74, 80, 854, 1236, 1293
ApoI	RAATTY	3 cut(s)	1063, 1130, 1220
AspLEI	GCGC	4 cut(s)	462, 526, 883, 1271
AspS9I	GGNCC	1 cut(s)	104
AsuC2I	CCSGG	1 cut(s)	718
AsuHPI	GGTGA	6 cut(s)	25, 250, 512, 658, 1003, 1480
AvaII	GGWCC	1 cut(s)	104
BamHI	GGATCC	1 cut(s)	1454
BanII	GRGCYC	2 cut(s)	128, 965
BarI	GAAGNNNNNNTAC	2 cut(s)	587, 619
BbrPI	CACGTG	1 cut(s)	558
Bbv12I	GWGCWC	1 cut(s)	927
BbvI	GCAGC	6 cut(s)	61, 65, 92, 841, 1223, 1280
BccI	CCATC	4 cut(s)	263, 650, 1081, 1523
BceAI	ACGGC	1 cut(s)	57
BciT130I	CCWGG	2 cut(s)	247, 647
BclI	TGATCA	1 cut(s)	570
BcnI	CCSGG	1 cut(s)	718
BfaI	CTAG	3 cut(s)	509, 1139, 1233
BfmI	CTRYAG	1 cut(s)	463
BfoI	RGCGCY	1 cut(s)	527
BisI	GCNGC	9 cut(s)	54, 75, 78, 81, 492, 855, 1045, 1237, 1294
BlpI	GCTNAGC	1 cut(s)	690
BlsI	GCNGC	9 cut(s)	55, 76, 79, 82, 493, 856, 1046, 1238, 1295
BmcAI	AGTACT	1 cut(s)	151
Bme1390I	CCNGG	3 cut(s)	247, 647, 718
Bme18I	GGWCC	1 cut(s)	104
BmgT120I	GGNCC	1 cut(s)	104
BmiI	GGNNCC	3 cut(s)	589, 1265, 1456
BmrFI	CCNGG	3 cut(s)	247, 647, 718
BmrI	ACTGGG	2 cut(s)	1060, 1460
BmsI	GCATC	1 cut(s)	447
BmuI	ACTGGG	2 cut(s)	1060, 1460
BplI	GAGNNNNNCTC	2 cut(s)	139, 171
BpmI	CTGGAG	1 cut(s)	668
Bpu1102I	GCTNAGC	1 cut(s)	690
BpuEI	CTTGAG	1 cut(s)	222
BpuMI	CCSGG	1 cut(s)	718
BsaAI	YACGTR	1 cut(s)	558
BsaJI	CCNNGG	4 cut(s)	486, 717, 1256, 1458
BsaWI	WCCGGW	3 cut(s)	311, 548, 1490
BsaXI	ACNNNNNCTCC	6 cut(s)	692, 722, 1248, 1278, 1350, 1380
Bsc4I	CCNNNNNNNGG	6 cut(s)	391, 487, 717, 792, 1079, 1257
Bse118I	RCCGGY	2 cut(s)	668, 1201
Bse1I	ACTGG	2 cut(s)	1055, 1455
Bse3DI	GCAATG	3 cut(s)	711, 1023, 1203
BseAI	TCCGGA	1 cut(s)	311
BseBI	CCWGG	2 cut(s)	247, 647
BseDI	CCNNGG	4 cut(s)	486, 717, 1256, 1458
BseGI	GGATG	2 cut(s)	462, 642
BseLI	CCNNNNNNNGG	6 cut(s)	391, 487, 717, 792, 1079, 1257
BseMI	GCAATG	3 cut(s)	711, 1023, 1203
BseMII	CTCAG	3 cut(s)	319, 402, 704
BseNI	ACTGG	2 cut(s)	1055, 1455
BseRI	GAGGAG	3 cut(s)	144, 323, 1371
BseXI	GCAGC	6 cut(s)	61, 65, 92, 841, 1223, 1280
BseYI	CCCAGC	1 cut(s)	97
BsgI	GTGCAG	1 cut(s)	742
Bsh1236I	CGCG	3 cut(s)	139, 970, 1269
BshFI	GGCC	4 cut(s)	179, 491, 796, 912
BsiHKAI	GWGCWC	1 cut(s)	927
BsiSI	CCGG	6 cut(s)	312, 549, 669, 717, 1202, 1491
BslFI	GGGAC	1 cut(s)	952
BslI	CCNNNNNNNGG	6 cut(s)	391, 487, 717, 792, 1079, 1257
BsmFI	GGGAC	1 cut(s)	952
BsnI	GGCC	4 cut(s)	179, 491, 796, 912
Bsp1286I	GDGCHC	3 cut(s)	128, 927, 965
Bsp13I	TCCGGA	1 cut(s)	311
Bsp143I	GATC	5 cut(s)	232, 570, 847, 888, 1454
Bsp1720I	GCTNAGC	1 cut(s)	690
Bsp19I	CCATGG	1 cut(s)	486
BspACI	CCGC	8 cut(s)	77, 341, 478, 492, 618, 800, 1044, 1267
BspANI	GGCC	4 cut(s)	179, 491, 796, 912
BspCNI	CTCAG	3 cut(s)	318, 401, 703
BspEI	TCCGGA	1 cut(s)	311
BspFNI	CGCG	3 cut(s)	139, 970, 1269
BspHI	TCATGA	1 cut(s)	573
BspLI	GGNNCC	3 cut(s)	589, 1265, 1456
BspPI	GGATC	5 cut(s)	227, 842, 896, 1449, 1462
BsrDI	GCAATG	3 cut(s)	711, 1023, 1203
BsrFI	RCCGGY	2 cut(s)	668, 1201
BsrI	ACTGG	2 cut(s)	1055, 1455
BssAI	RCCGGY	2 cut(s)	668, 1201
BssECI	CCNNGG	4 cut(s)	486, 717, 1256, 1458
BssMI	GATC	5 cut(s)	232, 570, 847, 888, 1454
BssNAI	GTATAC	1 cut(s)	414
BssT1I	CCWWGG	2 cut(s)	486, 1458
Bst1107I	GTATAC	1 cut(s)	414
Bst2UI	CCWGG	2 cut(s)	247, 647
Bst4CI	ACNGT	3 cut(s)	355, 895, 1260
BstAPI	GCANNNNNTGC	1 cut(s)	743
BstBAI	YACGTR	1 cut(s)	558
BstC8I	GCNNGC	5 cut(s)	163, 191, 522, 798, 1154
BstDEI	CTNAG	5 cut(s)	120, 305, 388, 690, 1472
BstDSI	CCRYGG	2 cut(s)	486, 1256
BstF5I	GGATG	2 cut(s)	462, 642
BstFNI	CGCG	3 cut(s)	139, 970, 1269
BstH2I	RGCGCY	1 cut(s)	527
BstHHI	GCGC	4 cut(s)	462, 526, 883, 1271
BstKTI	GATC	5 cut(s)	235, 573, 850, 891, 1457
BstMBI	GATC	5 cut(s)	232, 570, 847, 888, 1454
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 80, 195, 743, 960
BstNI	CCWGG	2 cut(s)	247, 647
BstNSI	RCATGY	1 cut(s)	193
BstSCI	CCNGG	3 cut(s)	245, 645, 716
BstSFI	CTRYAG	1 cut(s)	463
BstUI	CGCG	3 cut(s)	139, 970, 1269
BstV1I	GCAGC	6 cut(s)	61, 65, 92, 841, 1223, 1280
BstX2I	RGATCY	1 cut(s)	1454
BstYI	RGATCY	1 cut(s)	1454
BstZ17I	GTATAC	1 cut(s)	414
BsuRI	GGCC	4 cut(s)	179, 491, 796, 912
BtgI	CCRYGG	2 cut(s)	486, 1256
BtgZI	GCGATG	1 cut(s)	997
BtsCI	GGATG	2 cut(s)	462, 642
BtsI	GCAGTG	2 cut(s)	741, 1320
BtsIMutI	CAGTG	5 cut(s)	351, 396, 741, 891, 1320
Cac8I	GCNNGC	5 cut(s)	163, 191, 522, 798, 1154
CciI	TCATGA	1 cut(s)	573
CfoI	GCGC	4 cut(s)	462, 526, 883, 1271
Cfr10I	RCCGGY	2 cut(s)	668, 1201
Cfr13I	GGNCC	1 cut(s)	104
Csp6I	GTAC	6 cut(s)	150, 541, 655, 1367, 1403, 1448
CviQI	GTAC	6 cut(s)	150, 541, 655, 1367, 1403, 1448
DdeI	CTNAG	5 cut(s)	120, 305, 388, 690, 1472
DpnI	GATC	5 cut(s)	234, 572, 849, 890, 1456
DpnII	GATC	5 cut(s)	232, 570, 847, 888, 1454
EaeI	YGGCCR	1 cut(s)	489
EciI	GGCGGA	1 cut(s)	467
Eco130I	CCWWGG	2 cut(s)	486, 1458
Eco24I	GRGCYC	2 cut(s)	128, 965
Eco47I	GGWCC	1 cut(s)	104
Eco72I	CACGTG	1 cut(s)	558
EcoRI	GAATTC	1 cut(s)	1220
EcoRII	CCWGG	2 cut(s)	245, 645
EcoT14I	CCWWGG	2 cut(s)	486, 1458
EcoT38I	GRGCYC	2 cut(s)	128, 965
ErhI	CCWWGG	2 cut(s)	486, 1458
FaqI	GGGAC	1 cut(s)	952
FauI	CCCGC	1 cut(s)	793
FauNDI	CATATG	1 cut(s)	380
FbaI	TGATCA	1 cut(s)	570
FblI	GTMKAC	1 cut(s)	413
Fnu4HI	GCNGC	9 cut(s)	54, 75, 78, 81, 492, 855, 1045, 1237, 1294
FokI	GGATG	2 cut(s)	469, 629
FriOI	GRGCYC	2 cut(s)	128, 965
Fsp4HI	GCNGC	9 cut(s)	54, 75, 78, 81, 492, 855, 1045, 1237, 1294
FspBI	CTAG	3 cut(s)	509, 1139, 1233
GlaI	GCGC	4 cut(s)	461, 525, 882, 1270
GluI	GCNGC	9 cut(s)	54, 75, 78, 81, 492, 855, 1045, 1237, 1294
GsaI	CCCAGC	1 cut(s)	101
GsuI	CTGGAG	1 cut(s)	668
HaeII	RGCGCY	1 cut(s)	527
HaeIII	GGCC	4 cut(s)	179, 491, 796, 912
HapII	CCGG	6 cut(s)	312, 549, 669, 717, 1202, 1491
HhaI	GCGC	4 cut(s)	462, 526, 883, 1271
Hin6I	GCGC	4 cut(s)	460, 524, 881, 1269
HinP1I	GCGC	4 cut(s)	460, 524, 881, 1269
HincII	GTYRAC	2 cut(s)	808, 1168
HindII	GTYRAC	2 cut(s)	808, 1168
HindIII	AAGCTT	1 cut(s)	1336
HinfI	GANTC	6 cut(s)	59, 242, 263, 315, 375, 443
HpaI	GTTAAC	2 cut(s)	808, 1168
HpaII	CCGG	6 cut(s)	312, 549, 669, 717, 1202, 1491
HphI	GGTGA	6 cut(s)	25, 250, 512, 658, 1003, 1480
Hpy166II	GTNNAC	7 cut(s)	107, 414, 666, 808, 1168, 1256, 1531
Hpy188I	TCNGA	6 cut(s)	64, 320, 734, 847, 1226, 1520
Hpy188III	TCNNGA	7 cut(s)	239, 267, 312, 574, 1217, 1279, 1480
Hpy8I	GTNNAC	7 cut(s)	107, 414, 666, 808, 1168, 1256, 1531
HpyAV	CCTTC	4 cut(s)	347, 957, 975, 1336
HpyCH4III	ACNGT	3 cut(s)	355, 895, 1260
HpyCH4IV	ACGT	2 cut(s)	557, 1124
HpyCH4V	TGCA	8 cut(s)	193, 759, 1001, 1037, 1196, 1239, 1313, 1364
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 80, 195, 743, 960
HpyF3I	CTNAG	5 cut(s)	120, 305, 388, 690, 1472
HpySE526I	ACGT	2 cut(s)	557, 1124
HspAI	GCGC	4 cut(s)	460, 524, 881, 1269
Kpn2I	TCCGGA	1 cut(s)	311
Ksp22I	TGATCA	1 cut(s)	570
KspAI	GTTAAC	2 cut(s)	808, 1168
Kzo9I	GATC	5 cut(s)	232, 570, 847, 888, 1454
LmnI	GCTCC	4 cut(s)	441, 734, 1269, 1493
Lsp1109I	GCAGC	6 cut(s)	61, 65, 92, 841, 1223, 1280
LweI	GCATC	1 cut(s)	447
MaeI	CTAG	3 cut(s)	509, 1139, 1233
MaeII	ACGT	2 cut(s)	557, 1124
MaeIII	GTNAC	5 cut(s)	13, 423, 562, 1486, 1510
MalI	GATC	5 cut(s)	234, 572, 849, 890, 1456
MboI	GATC	5 cut(s)	232, 570, 847, 888, 1454
MboII	GAAGA	4 cut(s)	218, 607, 818, 1528
MfeI	CAATTG	2 cut(s)	1038, 1441
MflI	RGATCY	1 cut(s)	1454
MhlI	GDGCHC	3 cut(s)	128, 927, 965
MluCI	AATT	7 cut(s)	1038, 1063, 1130, 1220, 1434, 1441, 1497
MlyI	GAGTC	2 cut(s)	236, 272
MmeI	TCCRAC	1 cut(s)	193
MroI	TCCGGA	1 cut(s)	311
MseI	TTAA	3 cut(s)	807, 1091, 1167
MslI	CAYNNNNRTG	4 cut(s)	560, 671, 1016, 1387
MspA1I	CMGCKG	4 cut(s)	101, 343, 800, 854
MspI	CCGG	6 cut(s)	312, 549, 669, 717, 1202, 1491
MspR9I	CCNGG	3 cut(s)	247, 647, 718
MunI	CAATTG	2 cut(s)	1038, 1441
MvaI	CCWGG	2 cut(s)	247, 647
MvnI	CGCG	3 cut(s)	139, 970, 1269
MwoI	GCNNNNNNNGC	5 cut(s)	50, 80, 195, 743, 960
NciI	CCSGG	1 cut(s)	718
NcoI	CCATGG	1 cut(s)	486
NdeI	CATATG	1 cut(s)	380
NdeII	GATC	5 cut(s)	232, 570, 847, 888, 1454
NlaIV	GGNNCC	3 cut(s)	589, 1265, 1456
NmeAIII	GCCGAG	1 cut(s)	269
NmuCI	GTSAC	4 cut(s)	13, 562, 1486, 1510
NspI	RCATGY	1 cut(s)	193
OliI	CACNNNNGTG	1 cut(s)	560
PaeI	GCATGC	1 cut(s)	193
PagI	TCATGA	1 cut(s)	573
PfeI	GAWTC	4 cut(s)	59, 315, 375, 443
PfoI	TCCNGGA	1 cut(s)	645
PkrI	GCNGC	9 cut(s)	55, 76, 79, 82, 493, 856, 1046, 1238, 1295
PleI	GAGTC	2 cut(s)	236, 271
PmaCI	CACGTG	1 cut(s)	558
PmlI	CACGTG	1 cut(s)	558
PpsI	GAGTC	2 cut(s)	236, 271
Ppu21I	YACGTR	1 cut(s)	558
PsiI	TTATAA	1 cut(s)	1409
Psp6I	CCWGG	2 cut(s)	245, 645
PspCI	CACGTG	1 cut(s)	558
PspFI	CCCAGC	1 cut(s)	97
PspGI	CCWGG	2 cut(s)	245, 645
PspN4I	GGNNCC	3 cut(s)	589, 1265, 1456
PspPI	GGNCC	1 cut(s)	104
PsrI	GAACNNNNNNTAC	2 cut(s)	647, 679
PsuI	RGATCY	1 cut(s)	1454
PvuII	CAGCTG	2 cut(s)	101, 854
RsaI	GTAC	6 cut(s)	151, 542, 656, 1368, 1404, 1449
RsaNI	GTAC	6 cut(s)	150, 541, 655, 1367, 1403, 1448
RseI	CAYNNNNRTG	4 cut(s)	560, 671, 1016, 1387
SaqAI	TTAA	3 cut(s)	807, 1091, 1167
SatI	GCNGC	9 cut(s)	54, 75, 78, 81, 492, 855, 1045, 1237, 1294
Sau3AI	GATC	5 cut(s)	232, 570, 847, 888, 1454
Sau96I	GGNCC	1 cut(s)	104
ScaI	AGTACT	1 cut(s)	151
SchI	GAGTC	2 cut(s)	236, 272
ScrFI	CCNGG	3 cut(s)	247, 647, 718
SduI	GDGCHC	3 cut(s)	128, 927, 965
SfaNI	GCATC	1 cut(s)	447
SfcI	CTRYAG	1 cut(s)	463
SinI	GGWCC	1 cut(s)	104
SmiMI	CAYNNNNRTG	4 cut(s)	560, 671, 1016, 1387
SmlI	CTYRAG	1 cut(s)	237
SmoI	CTYRAG	1 cut(s)	237
SphI	GCATGC	1 cut(s)	193
Sse9I	AATT	7 cut(s)	1038, 1063, 1130, 1220, 1434, 1441, 1497
SsiI	CCGC	8 cut(s)	77, 341, 478, 492, 618, 800, 1044, 1267
SspMI	CTAG	3 cut(s)	509, 1139, 1233
StyD4I	CCNGG	3 cut(s)	245, 645, 716
StyI	CCWWGG	2 cut(s)	486, 1458
TaaI	ACNGT	3 cut(s)	355, 895, 1260
TaiI	ACGT	2 cut(s)	560, 1127
TaqI	TCGA	5 cut(s)	29, 69, 231, 266, 927
TasI	AATT	7 cut(s)	1038, 1063, 1130, 1220, 1434, 1441, 1497
TatI	WGTACW	1 cut(s)	149
TauI	GCSGC	3 cut(s)	80, 494, 1047
TfiI	GAWTC	4 cut(s)	59, 315, 375, 443
Tru1I	TTAA	3 cut(s)	807, 1091, 1167
Tru9I	TTAA	3 cut(s)	807, 1091, 1167
TscAI	CASTG	5 cut(s)	358, 396, 748, 898, 1320
TseFI	GTSAC	4 cut(s)	13, 562, 1486, 1510
TseI	GCWGC	6 cut(s)	53, 74, 80, 854, 1236, 1293
Tsp45I	GTSAC	4 cut(s)	13, 562, 1486, 1510
TspDTI	ATGAA	6 cut(s)	185, 388, 456, 608, 1256, 1384
TspGWI	ACGGA	2 cut(s)	32, 1095
TspRI	CASTG	5 cut(s)	358, 396, 748, 898, 1320
VpaK11BI	GGWCC	1 cut(s)	104
XapI	RAATTY	3 cut(s)	1063, 1130, 1220
XceI	RCATGY	1 cut(s)	193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1395
XmiI	GTMKAC	1 cut(s)	413
XspI	CTAG	3 cut(s)	509, 1139, 1233
ZrmI	AGTACT	1 cut(s)	151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.