pycom06g19880

glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
23136440 .. 23136679
240 bp
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UTR
Exon/CDS
Intron
pycom06g19880.1

Sequence Viewer

Length: 240 bp
ATGGGAGATGAAACATGGAGAGAGAACCCACTGTTGCCAGAAGATCCATTTGAAAAAACAATGGCGCGATTTTGGGCAAAGTATGTTGACGAGAAGGTAAACAAACAACATTCACACTGCACTCCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATTTAACTATACATATATCGAAAAAGAGAAGCTAACGAGCTTTGATGTCAAGGAAGAAACACCTAAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

9.28

Weight (kDa)

5.63

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 67
AclWI GGATC 1 cut(s) 38
AfaI GTAC 1 cut(s) 166
AgsI TTSAA 1 cut(s) 53
AjnI CCWGG 1 cut(s) 124
AluBI AGCT 2 cut(s) 199, 207
AluI AGCT 2 cut(s) 199, 207
AlwI GGATC 1 cut(s) 38
AspLEI GCGC 1 cut(s) 67
BciT130I CCWGG 1 cut(s) 126
Bme1390I CCNGG 1 cut(s) 126
BmrFI CCNGG 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 108
BseBI CCWGG 1 cut(s) 126
BsgI GTGCAG 1 cut(s) 103
Bsh1236I CGCG 1 cut(s) 67
Bsp1407I TGTACA 1 cut(s) 164
Bsp143I GATC 1 cut(s) 43
BspFNI CGCG 1 cut(s) 67
BspPI GGATC 1 cut(s) 38
BsrGI TGTACA 1 cut(s) 164
BssMI GATC 1 cut(s) 43
Bst2UI CCWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 33
BstAUI TGTACA 1 cut(s) 164
BstFNI CGCG 1 cut(s) 67
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstNI CCWGG 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 124
BstUI CGCG 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 43
BstYI RGATCY 1 cut(s) 43
BtsI GCAGTG 1 cut(s) 115
BtsIMutI CAGTG 2 cut(s) 29, 115
CfoI GCGC 1 cut(s) 67
Csp6I GTAC 1 cut(s) 165
CviAII CATG 1 cut(s) 15
CviJI RGCY 2 cut(s) 199, 207
CviKI_1 RGCY 2 cut(s) 199, 207
CviQI GTAC 1 cut(s) 165
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 124
FaeI CATG 1 cut(s) 18
FaiI YATR 5 cut(s) 16, 84, 177, 181, 183
FatI CATG 1 cut(s) 14
GlaI GCGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 108
HhaI GCGC 1 cut(s) 67
Hin1II CATG 1 cut(s) 18
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
Hpy166II GTNNAC 3 cut(s) 88, 100, 165
Hpy8I GTNNAC 3 cut(s) 88, 100, 165
HpyAV CCTTC 1 cut(s) 88
HpyCH4III ACNGT 1 cut(s) 33
HpyCH4V TGCA 1 cut(s) 120
Hsp92II CATG 1 cut(s) 18
HspAI GCGC 1 cut(s) 65
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 3 cut(s) 51, 111, 138
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 2 cut(s) 53, 233
MflI RGATCY 1 cut(s) 43
MseI TTAA 1 cut(s) 171
MspR9I CCNGG 1 cut(s) 126
MvaI CCWGG 1 cut(s) 126
MvnI CGCG 1 cut(s) 67
NdeII GATC 1 cut(s) 43
NlaIII CATG 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 124
PspGI CCWGG 1 cut(s) 124
PsuI RGATCY 1 cut(s) 43
RsaI GTAC 1 cut(s) 166
RsaNI GTAC 1 cut(s) 165
SaqAI TTAA 1 cut(s) 171
Sau3AI GATC 1 cut(s) 43
ScrFI CCNGG 1 cut(s) 126
SetI ASST 6 cut(s) 99, 130, 201, 209, 232, 239
SgeI CNNG 8 cut(s) 27, 50, 78, 103, 137, 138, 216, 229
StyD4I CCNGG 1 cut(s) 124
TaaI ACNGT 1 cut(s) 33
TaqI TCGA 1 cut(s) 186
TatI WGTACW 1 cut(s) 164
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 2 cut(s) 36, 122
TspDTI ATGAA 1 cut(s) 24
TspRI CASTG 2 cut(s) 36, 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.