RING FYVE PHD zinc finger superfamily protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g18011 |
| malus_domestica | MD06G1235600.v1.1 |
| prunus_persica | Prupe.5G240400_v2.0.a1 |
| pyrus_communis | pycom06g21070 |
| rosa_chinensis | RchiOBHm_Chr7g0177591 |
| rosa_laevigata | RLG00000005523 |
| rosa_multiflora | Rmu_sc0010592.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00275730 |
| rosa_samantha | Rh7AG006900 Rh7BG006900 Rh7CG007400 Rh7DG006900 |
| rosa_wichuraiana | Rw7G000590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 38 |
| AfaI | GTAC | 1 cut(s) | 6 |
| AflII | CTTAAG | 1 cut(s) | 8 |
| AgsI | TTSAA | 2 cut(s) | 35, 71 |
| Alw21I | GWGCWC | 1 cut(s) | 17 |
| Ama87I | CYCGRG | 2 cut(s) | 22, 202 |
| ApeKI | GCWGC | 2 cut(s) | 166, 193 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 178 |
| AsuC2I | CCSGG | 2 cut(s) | 23, 24 |
| AvaI | CYCGRG | 2 cut(s) | 22, 202 |
| Bbv12I | GWGCWC | 1 cut(s) | 17 |
| BbvI | GCAGC | 2 cut(s) | 153, 180 |
| BcnI | CCSGG | 2 cut(s) | 23, 24 |
| BfrI | CTTAAG | 1 cut(s) | 8 |
| BisI | GCNGC | 2 cut(s) | 167, 194 |
| BlsI | GCNGC | 2 cut(s) | 168, 195 |
| Bme1390I | CCNGG | 2 cut(s) | 23, 24 |
| BmeT110I | CYCGRG | 2 cut(s) | 22, 202 |
| BmrFI | CCNGG | 2 cut(s) | 23, 24 |
| BmsI | GCATC | 1 cut(s) | 66 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| BpuMI | CCSGG | 2 cut(s) | 23, 24 |
| BsaJI | CCNNGG | 2 cut(s) | 22, 142 |
| Bse1I | ACTGG | 1 cut(s) | 216 |
| BseDI | CCNNGG | 2 cut(s) | 22, 142 |
| BseGI | GGATG | 1 cut(s) | 57 |
| BseNI | ACTGG | 1 cut(s) | 216 |
| BseXI | GCAGC | 2 cut(s) | 153, 180 |
| BsiHKAI | GWGCWC | 1 cut(s) | 17 |
| BsiHKCI | CYCGRG | 2 cut(s) | 22, 202 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BsoBI | CYCGRG | 2 cut(s) | 22, 202 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| Bsp143I | GATC | 1 cut(s) | 81 |
| BspACI | CCGC | 1 cut(s) | 38 |
| BspTI | CTTAAG | 1 cut(s) | 8 |
| BsrI | ACTGG | 1 cut(s) | 216 |
| BssECI | CCNNGG | 2 cut(s) | 22, 142 |
| BssMI | GATC | 1 cut(s) | 81 |
| BstAFI | CTTAAG | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 2 cut(s) | 40, 198 |
| BstDEI | CTNAG | 1 cut(s) | 98 |
| BstF5I | GGATG | 1 cut(s) | 57 |
| BstKTI | GATC | 1 cut(s) | 84 |
| BstMBI | GATC | 1 cut(s) | 81 |
| BstSCI | CCNGG | 2 cut(s) | 21, 22 |
| BstV1I | GCAGC | 2 cut(s) | 153, 180 |
| BtsCI | GGATG | 1 cut(s) | 57 |
| Cac8I | GCNNGC | 2 cut(s) | 40, 198 |
| Cfr9I | CCCGGG | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 5 |
| CviAII | CATG | 1 cut(s) | 183 |
| CviJI | RGCY | 2 cut(s) | 141, 200 |
| CviKI_1 | RGCY | 2 cut(s) | 141, 200 |
| CviQI | GTAC | 1 cut(s) | 5 |
| DdeI | CTNAG | 1 cut(s) | 98 |
| DpnI | GATC | 1 cut(s) | 83 |
| DpnII | GATC | 1 cut(s) | 81 |
| Eco88I | CYCGRG | 2 cut(s) | 22, 202 |
| FaeI | CATG | 1 cut(s) | 186 |
| FaiI | YATR | 2 cut(s) | 65, 184 |
| FatI | CATG | 1 cut(s) | 182 |
| FauI | CCCGC | 1 cut(s) | 31 |
| Fnu4HI | GCNGC | 2 cut(s) | 167, 194 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 2 cut(s) | 167, 194 |
| GluI | GCNGC | 2 cut(s) | 167, 194 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 186 |
| HpaII | CCGG | 1 cut(s) | 23 |
| Hpy188III | TCNNGA | 1 cut(s) | 85 |
| Hpy99I | CGWCG | 1 cut(s) | 166 |
| HpyCH4V | TGCA | 2 cut(s) | 57, 196 |
| HpyF3I | CTNAG | 1 cut(s) | 98 |
| Hsp92II | CATG | 1 cut(s) | 186 |
| Kzo9I | GATC | 1 cut(s) | 81 |
| LpnPI | CCDG | 1 cut(s) | 36 |
| Lsp1109I | GCAGC | 2 cut(s) | 153, 180 |
| LweI | GCATC | 1 cut(s) | 66 |
| MaeIII | GTNAC | 1 cut(s) | 74 |
| MalI | GATC | 1 cut(s) | 83 |
| MboI | GATC | 1 cut(s) | 81 |
| MboII | GAAGA | 1 cut(s) | 183 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MluCI | AATT | 1 cut(s) | 129 |
| MnlI | CCTC | 2 cut(s) | 126, 152 |
| MroXI | GAANNNNTTC | 1 cut(s) | 178 |
| MseI | TTAA | 1 cut(s) | 9 |
| MspCI | CTTAAG | 1 cut(s) | 8 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 2 cut(s) | 23, 24 |
| NciI | CCSGG | 2 cut(s) | 23, 24 |
| NdeII | GATC | 1 cut(s) | 81 |
| NlaIII | CATG | 1 cut(s) | 186 |
| PdmI | GAANNNNTTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 2 cut(s) | 168, 195 |
| RsaI | GTAC | 1 cut(s) | 6 |
| RsaNI | GTAC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| SatI | GCNGC | 2 cut(s) | 167, 194 |
| Sau3AI | GATC | 1 cut(s) | 81 |
| ScrFI | CCNGG | 2 cut(s) | 23, 24 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 1 cut(s) | 54 |
| SfaNI | GCATC | 1 cut(s) | 66 |
| SmaI | CCCGGG | 1 cut(s) | 24 |
| SmlI | CTYRAG | 2 cut(s) | 8, 117 |
| SmoI | CTYRAG | 2 cut(s) | 8, 117 |
| Sse9I | AATT | 1 cut(s) | 129 |
| SsiI | CCGC | 1 cut(s) | 38 |
| StyD4I | CCNGG | 2 cut(s) | 21, 22 |
| TasI | AATT | 1 cut(s) | 129 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |
| TseI | GCWGC | 2 cut(s) | 166, 193 |
| TspDTI | ATGAA | 1 cut(s) | 171 |
| TspMI | CCCGGG | 1 cut(s) | 22 |
| Vha464I | CTTAAG | 1 cut(s) | 8 |
| XmaI | CCCGGG | 1 cut(s) | 22 |
| XmnI | GAANNNNTTC | 1 cut(s) | 178 |