pycom07g03570

Protein ENHANCED DISEASE RESISTANCE 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0001313
Physical Location & Seq
Reverse (-)
3026837 .. 3028186
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g03570.5

Sequence Viewer

Length: 1170 bp
ATGGACGGATCACCGTTTAATAAGGTAGGGAGTGAGCGGCACGGCTCCAATGGAACGTACACCATCTTGCAATTTCCAGCTGTCCATAAGAAAAAGCCTCAGAAGTCTGGATATCATCATACAAATATAAATCCATCTAGTTGGGAGATTAGAGATCTGAAAACATCAATGGGTTTAAATACTCCACGATGTCTTGTGACGCAAACGGTGGAGATGCGTTCTGTGGGCTGTGTACCTTATGCATTGTTGTGCCAATTGGCAGGTCTGAAGGATTATATTGGATCAAATCCTGCACAAATGTTCAAATCTTCTGCTTCAGTTATCCAATTGAAGTCAGCTGAAGCTTCCGTTTCCAATGCTGAATATGAGGCGGAGGGGGCGCACGATGAATTTTTTGATGCAACTTCTGCAGGCTCTTCATCTTCTGATGAAGAGAGTGACAGTGATGAACTTGACAATGATGAAGCAAAAGTGAGACTGAGGAATGTTGCGTGGGCCATCGCTAGCTTAGCTTTGAATCGAGCTCAAGCTGCAGATTTCCATGGTTCCTTGACCAAAGGGAAAGATGAGGTTGTCACAAACTGTTGGACATCTCTCCAAGTGGTAAGGGATTATGATCAGAGGAAGAACTACCTGGAGGACAATTCTAAGGTAATGGGAGGAGATTCCTTTCGCAAGCTCATAGCTGTAGATTGGTTCAAACTTAATAAAAGCATAGATAGATTCGCACTGCATCCAAGGTGCCTTGTCGAGTCAGAAGTTCCATCTAAACCAAATTATAGTTTGGTATTTTACGATGCCGCTGACAGACCTCCGAATCCAAATTCTTTGTTTCCTAAGTTTGTGGATGGAAGTTTAAAGATAATTCCAAGTATTGCTCAAGGATATTGGATGGTCAAGCACGCTGTTGGAACAAAAACTTGCTTACTGGGGAAAGCTGTATCCTGCAAATATCTCAGGCAAGACAATTTCCTAGAGATTGATGTAGATATTGGATCATCATCCGAGGCGAGTATCATTGGACTTGTTCTCGGATACGTCACGAGCATAGTGGCTGACCTTGAAATTTTGATAGAGGCAAAGGAGCAAGCAGAGTTGCCTGAGTACATTCTAGGGAATGTTCGACTAAATCGTTTGAAACGTGACTCAGCTGTTCATTTGGAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1336 START

Protein Analysis

390

Amino Acids

42.95

Weight (kDa)

5.78

Isoelectric Point (pI)

32.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 741
AccBSI CCGCTC 1 cut(s) 37
AciI CCGC 3 cut(s) 37, 371, 801
AclWI GGATC 3 cut(s) 16, 289, 1003
AcsI RAATTY 3 cut(s) 389, 823, 1065
AcuI CTGAAG 3 cut(s) 287, 300, 360
AfaI GTAC 3 cut(s) 59, 234, 1106
AgsI TTSAA 6 cut(s) 304, 331, 517, 700, 1064, 1138
AjnI CCWGG 1 cut(s) 633
Alw21I GWGCWC 1 cut(s) 526
Alw26I GTCTC 1 cut(s) 469
AlwI GGATC 3 cut(s) 16, 289, 1003
AoxI GGCC 1 cut(s) 495
ApeKI GCWGC 1 cut(s) 530
ApoI RAATTY 3 cut(s) 389, 823, 1065
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 1 cut(s) 495
AsuHPI GGTGA 1 cut(s) 3
AsuNHI GCTAGC 1 cut(s) 503
BanI GGYRCC 1 cut(s) 741
BanII GRGCYC 1 cut(s) 526
BauI CACGAG 1 cut(s) 1042
Bbv12I GWGCWC 1 cut(s) 526
BbvI GCAGC 1 cut(s) 517
BccI CCATC 6 cut(s) 71, 142, 506, 772, 842, 886
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 1 cut(s) 635
BciVI GTATCC 2 cut(s) 952, 1028
BclI TGATCA 1 cut(s) 616
BcoDI GTCTC 1 cut(s) 469
BfaI CTAG 4 cut(s) 138, 504, 974, 1112
BfmI CTRYAG 3 cut(s) 408, 531, 687
BfuAI ACCTGC 1 cut(s) 251
BfuI GTATCC 2 cut(s) 952, 1028
BglII AGATCT 1 cut(s) 154
BisI GCNGC 3 cut(s) 38, 531, 801
BlpI GCTNAGC 1 cut(s) 508
BlsI GCNGC 3 cut(s) 39, 532, 802
Bme1390I CCNGG 1 cut(s) 635
BmgT120I GGNCC 1 cut(s) 495
BmiI GGNNCC 3 cut(s) 46, 547, 743
BmrFI CCNGG 1 cut(s) 635
BmrI ACTGGG 1 cut(s) 938
BmsI GCATC 4 cut(s) 204, 388, 742, 787
BmtI GCTAGC 1 cut(s) 507
BmuI ACTGGG 1 cut(s) 938
BpmI CTGGAG 1 cut(s) 656
Bpu1102I GCTNAGC 1 cut(s) 508
BpuEI CTTGAG 2 cut(s) 510, 864
BsaBI GATNNNNATC 2 cut(s) 615, 1000
BsaJI CCNNGG 3 cut(s) 541, 737, 1005
Bse1I ACTGG 1 cut(s) 933
Bse8I GATNNNNATC 2 cut(s) 615, 1000
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 3 cut(s) 541, 737, 1005
BseGI GGATG 4 cut(s) 733, 853, 897, 1001
BseJI GATNNNNATC 2 cut(s) 615, 1000
BseMII CTCAG 5 cut(s) 113, 470, 970, 1092, 1161
BseNI ACTGG 1 cut(s) 933
BseRI GAGGAG 1 cut(s) 675
BseXI GCAGC 1 cut(s) 517
BsgI GTGCAG 1 cut(s) 276
BshFI GGCC 1 cut(s) 497
BshNI GGYRCC 1 cut(s) 741
BsiHKAI GWGCWC 1 cut(s) 526
BsmAI GTCTC 1 cut(s) 469
BsnI GGCC 1 cut(s) 497
Bsp1286I GDGCHC 1 cut(s) 526
Bsp143I GATC 5 cut(s) 8, 154, 281, 616, 995
Bsp1720I GCTNAGC 1 cut(s) 508
Bsp19I CCATGG 1 cut(s) 541
BspACI CCGC 3 cut(s) 37, 371, 801
BspANI GGCC 1 cut(s) 497
BspCNI CTCAG 5 cut(s) 112, 471, 969, 1093, 1160
BspLI GGNNCC 3 cut(s) 46, 547, 743
BspMAI CTGCAG 2 cut(s) 412, 535
BspMI ACCTGC 1 cut(s) 251
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 3 cut(s) 16, 289, 1003
BspQI GCTCTTC 1 cut(s) 421
BspT107I GGYRCC 1 cut(s) 741
BsrBI CCGCTC 1 cut(s) 37
BsrI ACTGG 1 cut(s) 933
BssECI CCNNGG 3 cut(s) 541, 737, 1005
BssMI GATC 5 cut(s) 8, 154, 281, 616, 995
BssSI CACGAG 1 cut(s) 1042
BssT1I CCWWGG 2 cut(s) 541, 737
Bst2BI CACGAG 1 cut(s) 1042
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 4 cut(s) 15, 208, 443, 584
Bst6I CTCTTC 2 cut(s) 421, 426
BstAPI GCANNNNNTGC 1 cut(s) 407
BstC8I GCNNGC 5 cut(s) 412, 505, 677, 903, 1089
BstDEI CTNAG 8 cut(s) 99, 479, 508, 648, 837, 956, 1101, 1147
BstDSI CCRYGG 1 cut(s) 541
BstF5I GGATG 4 cut(s) 733, 853, 897, 1001
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 5 cut(s) 11, 157, 284, 619, 998
BstMAI GTCTC 1 cut(s) 469
BstMBI GATC 5 cut(s) 8, 154, 281, 616, 995
BstMWI GCNNNNNNNGC 4 cut(s) 377, 407, 509, 530
BstNI CCWGG 1 cut(s) 635
BstSCI CCNGG 1 cut(s) 633
BstSFI CTRYAG 3 cut(s) 408, 531, 687
BstV1I GCAGC 1 cut(s) 517
BstX2I RGATCY 1 cut(s) 154
BstXI CCANNNNNNTGG 1 cut(s) 141
BstYI RGATCY 1 cut(s) 154
BsuI GTATCC 2 cut(s) 952, 1028
BsuRI GGCC 1 cut(s) 497
BtgI CCRYGG 1 cut(s) 541
BtgZI GCGATG 1 cut(s) 484
BtsCI GGATG 4 cut(s) 733, 853, 897, 1001
BtsI GCAGTG 1 cut(s) 728
BtsIMutI CAGTG 2 cut(s) 448, 728
BveI ACCTGC 1 cut(s) 251
Cac8I GCNNGC 5 cut(s) 412, 505, 677, 903, 1089
CfoI GCGC 1 cut(s) 382
Cfr13I GGNCC 1 cut(s) 495
CseI GACGC 1 cut(s) 208
Csp6I GTAC 3 cut(s) 58, 233, 1105
CviAII CATG 1 cut(s) 542
CviQI GTAC 3 cut(s) 58, 233, 1105
DdeI CTNAG 8 cut(s) 99, 479, 508, 648, 837, 956, 1101, 1147
DpnI GATC 5 cut(s) 10, 156, 283, 618, 997
DpnII GATC 5 cut(s) 8, 154, 281, 616, 995
DraI TTTAAA 2 cut(s) 177, 858
Eam1104I CTCTTC 2 cut(s) 421, 426
EarI CTCTTC 2 cut(s) 421, 426
EciI GGCGGA 1 cut(s) 386
Ecl136II GAGCTC 1 cut(s) 524
Eco130I CCWWGG 2 cut(s) 541, 737
Eco24I GRGCYC 1 cut(s) 526
Eco32I GATATC 1 cut(s) 113
Eco53kI GAGCTC 1 cut(s) 524
Eco57I CTGAAG 3 cut(s) 287, 300, 360
EcoICRI GAGCTC 1 cut(s) 524
EcoRII CCWGG 1 cut(s) 633
EcoRV GATATC 1 cut(s) 113
EcoT14I CCWWGG 2 cut(s) 541, 737
EcoT22I ATGCAT 1 cut(s) 244
EcoT38I GRGCYC 1 cut(s) 526
ErhI CCWWGG 2 cut(s) 541, 737
FaeI CATG 1 cut(s) 545
FatI CATG 1 cut(s) 541
FbaI TGATCA 1 cut(s) 616
Fnu4HI GCNGC 3 cut(s) 38, 531, 801
FokI GGATG 4 cut(s) 720, 860, 904, 988
FriOI GRGCYC 1 cut(s) 526
Fsp4HI GCNGC 3 cut(s) 38, 531, 801
FspBI CTAG 4 cut(s) 138, 504, 974, 1112
GlaI GCGC 1 cut(s) 381
GluI GCNGC 3 cut(s) 38, 531, 801
GsuI CTGGAG 1 cut(s) 656
HaeIII GGCC 1 cut(s) 497
HgaI GACGC 1 cut(s) 208
HhaI GCGC 1 cut(s) 382
Hin1II CATG 1 cut(s) 545
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 6 cut(s) 517, 665, 723, 752, 817, 1145
HphI GGTGA 1 cut(s) 3
Hpy166II GTNNAC 2 cut(s) 60, 233
Hpy188I TCNGA 9 cut(s) 102, 159, 267, 427, 621, 757, 816, 1006, 1034
Hpy188III TCNNGA 2 cut(s) 108, 1042
Hpy8I GTNNAC 2 cut(s) 60, 233
HpyAV CCTTC 1 cut(s) 262
HpyCH4III ACNGT 4 cut(s) 15, 208, 443, 584
HpyCH4IV ACGT 3 cut(s) 56, 1038, 1141
HpyCH4V TGCA 8 cut(s) 70, 242, 293, 401, 410, 533, 733, 948
HpyF10VI GCNNNNNNNGC 4 cut(s) 377, 407, 509, 530
HpyF3I CTNAG 8 cut(s) 99, 479, 508, 648, 837, 956, 1101, 1147
HpySE526I ACGT 3 cut(s) 56, 1038, 1141
Hsp92II CATG 1 cut(s) 545
HspAI GCGC 1 cut(s) 380
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 5 cut(s) 8, 154, 281, 616, 995
LguI GCTCTTC 1 cut(s) 421
LmnI GCTCC 2 cut(s) 50, 1084
Lsp1109I GCAGC 1 cut(s) 517
LweI GCATC 4 cut(s) 204, 388, 742, 787
MaeI CTAG 4 cut(s) 138, 504, 974, 1112
MaeII ACGT 3 cut(s) 56, 1038, 1141
MaeIII GTNAC 5 cut(s) 196, 437, 574, 1039, 1142
MalI GATC 5 cut(s) 10, 156, 283, 618, 997
MbiI CCGCTC 1 cut(s) 37
MboI GATC 5 cut(s) 8, 154, 281, 616, 995
MboII GAAGA 5 cut(s) 300, 408, 414, 443, 637
MfeI CAATTG 2 cut(s) 254, 326
MflI RGATCY 1 cut(s) 154
MhlI GDGCHC 1 cut(s) 526
MlyI GAGTC 2 cut(s) 761, 1139
MmeI TCCRAC 2 cut(s) 566, 889
Mph1103I ATGCAT 1 cut(s) 244
MseI TTAA 5 cut(s) 18, 176, 705, 857, 1168
MslI CAYNNNNRTG 1 cut(s) 247
MspA1I CMGCKG 4 cut(s) 80, 338, 803, 1151
MspR9I CCNGG 1 cut(s) 635
MunI CAATTG 2 cut(s) 254, 326
MvaI CCWGG 1 cut(s) 635
MwoI GCNNNNNNNGC 4 cut(s) 377, 407, 509, 530
NcoI CCATGG 1 cut(s) 541
NdeII GATC 5 cut(s) 8, 154, 281, 616, 995
NheI GCTAGC 1 cut(s) 503
NlaIII CATG 1 cut(s) 545
NlaIV GGNNCC 3 cut(s) 46, 547, 743
NmuCI GTSAC 5 cut(s) 196, 437, 574, 1039, 1142
NsiI ATGCAT 1 cut(s) 244
PciSI GCTCTTC 1 cut(s) 421
PcsI WCGNNNNNNNCGW 2 cut(s) 1129, 1138
PfeI GAWTC 4 cut(s) 517, 665, 723, 817
PkrI GCNGC 3 cut(s) 39, 532, 802
PleI GAGTC 2 cut(s) 760, 1139
PpsI GAGTC 2 cut(s) 760, 1139
Psp124BI GAGCTC 1 cut(s) 526
Psp6I CCWGG 1 cut(s) 633
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 3 cut(s) 46, 547, 743
PspPI GGNCC 1 cut(s) 495
PstI CTGCAG 2 cut(s) 412, 535
PsuI RGATCY 1 cut(s) 154
PvuII CAGCTG 3 cut(s) 80, 338, 1151
RsaI GTAC 3 cut(s) 59, 234, 1106
RsaNI GTAC 3 cut(s) 58, 233, 1105
RseI CAYNNNNRTG 1 cut(s) 247
SacI GAGCTC 1 cut(s) 526
SapI GCTCTTC 1 cut(s) 421
SaqAI TTAA 5 cut(s) 18, 176, 705, 857, 1168
SatI GCNGC 3 cut(s) 38, 531, 801
Sau3AI GATC 5 cut(s) 8, 154, 281, 616, 995
Sau96I GGNCC 1 cut(s) 495
SchI GAGTC 2 cut(s) 761, 1139
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 1 cut(s) 526
SfaNI GCATC 4 cut(s) 204, 388, 742, 787
SfcI CTRYAG 3 cut(s) 408, 531, 687
SmiMI CAYNNNNRTG 1 cut(s) 247
SmlI CTYRAG 2 cut(s) 525, 879
SmoI CTYRAG 2 cut(s) 525, 879
SsiI CCGC 3 cut(s) 37, 371, 801
SspMI CTAG 4 cut(s) 138, 504, 974, 1112
SstI GAGCTC 1 cut(s) 526
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 2 cut(s) 541, 737
TaaI ACNGT 4 cut(s) 15, 208, 443, 584
TaiI ACGT 3 cut(s) 59, 1041, 1144
TaqI TCGA 3 cut(s) 520, 750, 1123
TatI WGTACW 1 cut(s) 1104
TauI GCSGC 2 cut(s) 40, 803
TfiI GAWTC 4 cut(s) 517, 665, 723, 817
Tru1I TTAA 5 cut(s) 18, 176, 705, 857, 1168
Tru9I TTAA 5 cut(s) 18, 176, 705, 857, 1168
TscAI CASTG 2 cut(s) 448, 735
TseFI GTSAC 5 cut(s) 196, 437, 574, 1039, 1142
TseI GCWGC 1 cut(s) 530
Tsp45I GTSAC 5 cut(s) 196, 437, 574, 1039, 1142
TspDTI ATGAA 6 cut(s) 402, 408, 444, 462, 477, 1145
TspGWI ACGGA 2 cut(s) 21, 337
TspRI CASTG 2 cut(s) 448, 735
XapI RAATTY 3 cut(s) 389, 823, 1065
XspI CTAG 4 cut(s) 138, 504, 974, 1112
Zsp2I ATGCAT 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.