Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005127.1

Orthogroup ID

OG0001313

Physical Location & Seq

Genomic Coordinates Forward (+)

2288 .. 10595

Gene Structure 8308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005127.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

atggcggaggcgccgccgacgacgacgcatcaccggagatcgttgtccgactttgccgccgtgtcgctgagcggactgttcggaggcggtggaggaggaggaggaggaggagatgatcagagaggcggaggcggaggaggaggtggaggtggaggtggaggagtagtaggcggagggtcgacgtttgagtatttcggttgggtgtatcatttgggagtcaattccatcggccacgagtactgtcacctccggtttctcttcatccgaggcaagtatgtcgagatgtacaagcgtgatcctcacgaaaacccaggcattaaacctattaggaggggcgttgttggacctacactgatgctagaggaggttgggcgtcggaaggtgtactatggggatgtttatgttctgcggttttacaatcgattggacgaatcaaagaagggggaaattgcttgtgctacggctgaagaagcccagaaatggctggaggcatttgaccaatccaagcaacaggctgagtatgagctgataagaggaggtagcgctagaaacaaactgagcatggaatccgagatcaaccttgatgaacatcgacctagagtgaggcgctatgcaagtggattgaaaaggcttataaaaattgggcaaggacctgaagtccttttgagccaatcctcaaaccgtgcaaatggtggtccagatggatattatgagagggatggtggagatgcaattgagacatatcagtggaagtgcgtacgaacaattaatggtgttaggatatttgaagatgttgctaactctgagactggtaaaggtgttattgtcaaggctgttggtgttatcgaggcaagtgcagatacttctttcgaagtgcttttaaaccttgagaaacatcagagatatgagtgggatatgctgacaggagacttagagctgcttgattcttatgatggacactacgatgttgtctatgggacatttgatcccaggtatcttactcggtggcattccaagagagattttatattttctaggcaatggtttcgtggacaggatggagcatatacaatcctgcatttcccagctgttcataagaagaagcctccaagatctggatatcgtcgcacaaaaataaatccatctacttgggagattagaaatttgaattcatccatgggttcagatagtccaagatgtctcgtcacgcaaatgttggagatacattctgcaggctggagcagatggaagaaaagtcactgctcaaagtttgagaggagtgtaccttatgcattgttgtgccaagtaggaggtatgaaggaatatattggagcaaatcctgcactaaaatgtcaatcttctgccacatttgtccaatcaaagctatcatcagtttccatttcaaatgctgaatacaatgagtcagatgtaaaggatgagttttacgatgcaatttctacagactcttcatcttcggatgaagaagaaactgcagatgctaataaggaactggattctgaagtggctcctgtcatgattgatctgagccagttctctgtttcattgtgcaaagggaaggatgatgctgacacaaactgctggtcaactccaagcggcaagggatttatgatcagaggaaagaactacctaaaggacaattccaaggtcacgggaggagatccccttcttaatctcataggagttgattggttcaaagttgataaaaccatggatagtattgcacttcatcccaggtgtcttgttcagtcagaagccggaaagaagcttccattcatactagtcatcaatctccaggttcctgcaaagccaaactatagtttggtactttactatgctgctgacagacctccaaagccagattctctgttttctaaatttgtggatgggaatgacatgtttcgcaatgcaagattcaagttgattcccagtattgttgagggatattggatggtcaagcgtgctgttggaacaaaagcttgcctgctgggaaaagctgtaacttgcaaatatctcagacaagacaatttcctagagattgatgtcgatattggatcatcatctgtggcaaggagtgtcatcggacttgtcttaggatatgtcacgagcatagttgttgatcttgcaattttgatagaggcaagggaggaggaagagttgcccgagtacattcttgggactgttcgactaaatcgtttgaagctcgagtctgctgttcatttggaggaataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1336 START

Protein Analysis

749

Amino Acids

83.19

Weight (kDa)

6.63

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35180 AT5G35180 AT5G35180 AT5G35180 AT5G35180
fragaria_vesca	FvH4_1g01530 FvH4_1g01530 FvH4_1g01530 FvH4_1g01530 FvH4_1g01530 FvH4_7g03330 FvH4_7g03330 FvH4_7g03330 FvH4_7g03330
malus_domestica	MD02G1283900.v1.1 MD07G1049900.v1.1 MD15G1157900.v1.1
prunus_persica	Prupe.2G038700_v2.0.a1 Prupe.2G038700_v2.0.a1 Prupe.2G038700_v2.0.a1 Prupe.2G038700_v2.0.a1 Prupe.7G253100_v2.0.a1 Prupe.7G253100_v2.0.a1 Prupe.7G253100_v2.0.a1 Prupe.7G253100_v2.0.a1
pyrus_communis	pycom02g24190 pycom07g03570 pycom15g14170
rosa_chinensis	RchiOBHm_Chr1g0325641 RchiOBHm_Chr2g0086461
rosa_laevigata	RLG00000015760 RLG00000030114
rosa_multiflora	Rmu_sc0000651.1_g000003 Rmu_sc0005127.1_g000002 Rmu_sc0012559.1_g000004 Rmu_sc0021008.1_g000001 Rmu_sc0021009.1_g000001
rosa_roxburghii	Rroxscaffold_2G00154560 Rroxscaffold_4G00324560
rosa_rugosa	Rorug01G0053300 Rorug01G0053400 Rorug01G0053500 Rorug01G0467400 Rorug01G0467400
rosa_samantha	Rh1AG069000 Rh1BG056400 Rh1CG069300 Rh1DG074000 Rh2AG018200 Rh2BG017800 Rh2CG018600 Rh2DG019500
rosa_wichuraiana	Rw1G005710 Rw2G001520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
AccB1I	GGYRCC	1 cut(s)	10
AccB7I	CCANNNNNTGG	1 cut(s)	1115
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	179
AclWI	GGATC	4 cut(s)	290, 980, 1673, 2080
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	3 cut(s)	1162, 1168, 1895
AcuI	CTGAAG	3 cut(s)	486, 675, 1539
AcyI	GRCGYC	2 cut(s)	11, 373
AfaI	GTAC	7 cut(s)	239, 287, 386, 759, 1284, 1845, 2186
AfeI	AGCGCT	1 cut(s)	544
AfiI	CCNNNNNNNGG	2 cut(s)	480, 1115
AflIII	ACRYGT	1 cut(s)	1914
AgsI	TTSAA	7 cut(s)	625, 788, 1168, 1404, 1714, 1936, 2218
AhdI	GACNNNNNGTC	1 cut(s)	656
AhlI	ACTAGT	1 cut(s)	1798
AjnI	CCWGG	4 cut(s)	310, 989, 1751, 1812
AjuI	GAANNNNNNNTTGG	2 cut(s)	1864, 1896
AluBI	AGCT	8 cut(s)	526, 937, 1088, 1384, 1786, 1997, 2015, 2221
AluI	AGCT	8 cut(s)	526, 937, 1088, 1384, 1786, 1997, 2015, 2221
Alw26I	GTCTC	4 cut(s)	731, 800, 921, 1205
AlwI	GGATC	4 cut(s)	290, 980, 1673, 2080
Ama87I	CYCGRG	2 cut(s)	2180, 2222
Aor51HI	AGCGCT	1 cut(s)	544
AoxI	GGCC	1 cut(s)	229
ApeKI	GCWGC	2 cut(s)	937, 1856
ApoI	RAATTY	3 cut(s)	1162, 1168, 1895
ArsI	GACNNNNNNTTYG	2 cut(s)	1586, 1618
AseI	ATTAAT	1 cut(s)	768
AspLEI	GCGC	3 cut(s)	13, 545, 609
AspS9I	GGNCC	3 cut(s)	344, 650, 695
AsuHPI	GGTGA	2 cut(s)	23, 236
AsuII	TTCGAA	1 cut(s)	870
AvaI	CYCGRG	2 cut(s)	2180, 2222
AvaII	GGWCC	3 cut(s)	344, 650, 695
BanI	GGYRCC	1 cut(s)	10
BauI	CACGAG	2 cut(s)	233, 2122
BbvI	GCAGC	2 cut(s)	924, 1843
BccI	CCATC	9 cut(s)	233, 695, 713, 947, 1052, 1150, 1239, 1898, 1963
BceAI	ACGGC	2 cut(s)	44, 477
BcgI	CGANNNNNNTGC	6 cut(s)	259, 293, 836, 870, 1028, 1062
BciT130I	CCWGG	4 cut(s)	312, 991, 1753, 1814
BclI	TGATCA	2 cut(s)	115, 1629
BcoDI	GTCTC	4 cut(s)	731, 800, 921, 1205
BcuI	ACTAGT	1 cut(s)	1798
BfaI	CTAG	6 cut(s)	359, 546, 597, 1035, 1799, 2051
BfmI	CTRYAG	4 cut(s)	1230, 1458, 1491, 1834
BfoI	RGCGCY	3 cut(s)	14, 546, 610
BglII	AGATCT	1 cut(s)	1112
BisI	GCNGC	5 cut(s)	14, 57, 938, 1615, 1857
BlpI	GCTNAGC	1 cut(s)	68
BlsI	GCNGC	5 cut(s)	15, 58, 939, 1616, 1858
BmcAI	AGTACT	1 cut(s)	239
Bme1390I	CCNGG	4 cut(s)	312, 991, 1753, 1814
Bme18I	GGWCC	3 cut(s)	344, 650, 695
BmeRI	GACNNNNNGTC	1 cut(s)	656
BmeT110I	CYCGRG	2 cut(s)	2180, 2222
BmgT120I	GGNCC	3 cut(s)	344, 650, 695
BmiI	GGNNCC	3 cut(s)	12, 1527, 1818
BmrFI	CCNGG	4 cut(s)	312, 991, 1753, 1814
BmrI	ACTGGG	1 cut(s)	1941
BmsI	GCATC	6 cut(s)	37, 345, 718, 1438, 1486, 1573
BmuI	ACTGGG	1 cut(s)	1941
BpmI	CTGGAG	3 cut(s)	506, 1258, 1796
Bpu1102I	GCTNAGC	1 cut(s)	68
Bpu14I	TTCGAA	1 cut(s)	870
BpuEI	CTTGAG	1 cut(s)	908
Bsa29I	ATCGAT	1 cut(s)	421
BsaBI	GATNNNNATC	2 cut(s)	588, 2077
BsaHI	GRCGYC	2 cut(s)	11, 373
BsaJI	CCNNGG	7 cut(s)	265, 310, 989, 1176, 1662, 1728, 1751
BsaWI	WCCGGW	2 cut(s)	33, 249
BsaXI	ACNNNNNCTCC	4 cut(s)	150, 180, 2159, 2189
Bsc4I	CCNNNNNNNGG	2 cut(s)	480, 1115
Bse1I	ACTGG	4 cut(s)	814, 1515, 1549, 1947
Bse3DI	GCAATG	2 cut(s)	1046, 1930
Bse8I	GATNNNNATC	2 cut(s)	588, 2077
BseBI	CCWGG	4 cut(s)	312, 991, 1753, 1814
BseCI	ATCGAT	1 cut(s)	421
BseDI	CCNNGG	7 cut(s)	265, 310, 989, 1176, 1662, 1728, 1751
BseJI	GATNNNNATC	2 cut(s)	588, 2077
BseLI	CCNNNNNNNGG	2 cut(s)	480, 1115
BseMI	GCAATG	2 cut(s)	1046, 1930
BseMII	CTCAG	6 cut(s)	59, 507, 548, 795, 1535, 2047
BseNI	ACTGG	4 cut(s)	814, 1515, 1549, 1947
BseXI	GCAGC	2 cut(s)	924, 1843
BseYI	CCCAGC	2 cut(s)	1084, 2005
BsgI	GTGCAG	2 cut(s)	876, 1326
BshFI	GGCC	1 cut(s)	231
BshNI	GGYRCC	1 cut(s)	10
BshVI	ATCGAT	1 cut(s)	421
BsiHKCI	CYCGRG	2 cut(s)	2180, 2222
BsiSI	CCGG	3 cut(s)	34, 250, 1776
BsiWI	CGTACG	1 cut(s)	757
BslFI	GGGAC	2 cut(s)	991, 2209
BslI	CCNNNNNNNGG	2 cut(s)	480, 1115
BsmAI	GTCTC	4 cut(s)	731, 800, 921, 1205
BsmFI	GGGAC	2 cut(s)	991, 2209
BsmI	GAATGC	1 cut(s)	1009
BsnI	GGCC	1 cut(s)	231
BsoBI	CYCGRG	2 cut(s)	2180, 2222
Bsp119I	TTCGAA	1 cut(s)	870
Bsp1407I	TGTACA	1 cut(s)	285
Bsp1720I	GCTNAGC	1 cut(s)	68
Bsp19I	CCATGG	2 cut(s)	1176, 1728
BspANI	GGCC	1 cut(s)	231
BspCNI	CTCAG	6 cut(s)	60, 508, 549, 796, 1536, 2046
BspDI	ATCGAT	1 cut(s)	421
BspHI	TCATGA	1 cut(s)	1533
BspLI	GGNNCC	3 cut(s)	12, 1527, 1818
BspMAI	CTGCAG	2 cut(s)	1234, 1495
BspPI	GGATC	4 cut(s)	290, 980, 1673, 2080
BspT104I	TTCGAA	1 cut(s)	870
BspT107I	GGYRCC	1 cut(s)	10
BsrBI	CCGCTC	1 cut(s)	72
BsrDI	GCAATG	2 cut(s)	1046, 1930
BsrGI	TGTACA	1 cut(s)	285
BsrI	ACTGG	4 cut(s)	814, 1515, 1549, 1947
BssECI	CCNNGG	7 cut(s)	265, 310, 989, 1176, 1662, 1728, 1751
BssNI	GRCGYC	2 cut(s)	11, 373
BssSI	CACGAG	2 cut(s)	233, 2122
BssT1I	CCWWGG	3 cut(s)	1176, 1662, 1728
Bst2BI	CACGAG	2 cut(s)	233, 2122
Bst2UI	CCWGG	4 cut(s)	312, 991, 1753, 1814
Bst4CI	ACNGT	4 cut(s)	78, 242, 683, 2200
Bst6I	CTCTTC	3 cut(s)	263, 1471, 2166
BstACI	GRCGYC	2 cut(s)	11, 373
BstAPI	GCANNNNNTGC	1 cut(s)	1340
BstAUI	TGTACA	1 cut(s)	285
BstBI	TTCGAA	1 cut(s)	870
BstC8I	GCNNGC	4 cut(s)	1234, 1980, 1999, 2003
BstDEI	CTNAG	8 cut(s)	68, 516, 557, 804, 931, 1544, 2033, 2110
BstDSI	CCRYGG	2 cut(s)	1176, 1728
BstH2I	RGCGCY	3 cut(s)	14, 546, 610
BstHHI	GCGC	3 cut(s)	13, 545, 609
BstMAI	GTCTC	4 cut(s)	731, 800, 921, 1205
BstMWI	GCNNNNNNNGC	2 cut(s)	470, 1340
BstNI	CCWGG	4 cut(s)	312, 991, 1753, 1814
BstNSI	RCATGY	1 cut(s)	1918
BstSCI	CCNGG	4 cut(s)	310, 989, 1751, 1812
BstSFI	CTRYAG	4 cut(s)	1230, 1458, 1491, 1834
BstV1I	GCAGC	2 cut(s)	924, 1843
BstX2I	RGATCY	2 cut(s)	1112, 1678
BstXI	CCANNNNNNTGG	1 cut(s)	1149
BstYI	RGATCY	2 cut(s)	1112, 1678
Bsu15I	ATCGAT	1 cut(s)	421
BsuRI	GGCC	1 cut(s)	231
BsuTUI	ATCGAT	1 cut(s)	421
BtgI	CCRYGG	2 cut(s)	1176, 1728
BtsI	GCAGTG	1 cut(s)	1258
BtsIMutI	CAGTG	3 cut(s)	350, 752, 1258
Cac8I	GCNNGC	4 cut(s)	1234, 1980, 1999, 2003
CciI	TCATGA	1 cut(s)	1533
CfoI	GCGC	3 cut(s)	13, 545, 609
Cfr13I	GGNCC	3 cut(s)	344, 650, 695
ClaI	ATCGAT	1 cut(s)	421
CseI	GACGC	2 cut(s)	34, 362
Csp6I	GTAC	7 cut(s)	238, 286, 385, 758, 1283, 1844, 2185
CviAII	CATG	5 cut(s)	562, 1177, 1534, 1729, 1915
CviQI	GTAC	7 cut(s)	238, 286, 385, 758, 1283, 1844, 2185
DdeI	CTNAG	8 cut(s)	68, 516, 557, 804, 931, 1544, 2033, 2110
DinI	GGCGCC	1 cut(s)	12
DraI	TTTAAA	1 cut(s)	882
DriI	GACNNNNNGTC	1 cut(s)	656
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	3 cut(s)	263, 1471, 2166
Eam1105I	GACNNNNNGTC	1 cut(s)	656
EarI	CTCTTC	3 cut(s)	263, 1471, 2166
EciI	GGCGGA	4 cut(s)	20, 141, 147, 186
Eco130I	CCWWGG	3 cut(s)	1176, 1662, 1728
Eco32I	GATATC	1 cut(s)	1121
Eco47I	GGWCC	3 cut(s)	344, 650, 695
Eco47III	AGCGCT	1 cut(s)	544
Eco57I	CTGAAG	3 cut(s)	486, 675, 1539
Eco88I	CYCGRG	2 cut(s)	2180, 2222
EcoO109I	RGGNCCY	1 cut(s)	650
EcoRI	GAATTC	1 cut(s)	1168
EcoRII	CCWGG	4 cut(s)	310, 989, 1751, 1812
EcoRV	GATATC	1 cut(s)	1121
EcoT14I	CCWWGG	3 cut(s)	1176, 1662, 1728
EcoT22I	ATGCAT	1 cut(s)	1294
EgeI	GGCGCC	1 cut(s)	12
EheI	GGCGCC	1 cut(s)	12
ErhI	CCWWGG	3 cut(s)	1176, 1662, 1728
FaeI	CATG	5 cut(s)	565, 1180, 1537, 1732, 1918
FaqI	GGGAC	2 cut(s)	991, 2209
FatI	CATG	5 cut(s)	561, 1176, 1533, 1728, 1914
FbaI	TGATCA	2 cut(s)	115, 1629
FblI	GTMKAC	1 cut(s)	179
Fnu4HI	GCNGC	5 cut(s)	14, 57, 938, 1615, 1857
Fsp4HI	GCNGC	5 cut(s)	14, 57, 938, 1615, 1857
FspBI	CTAG	6 cut(s)	359, 546, 597, 1035, 1799, 2051
GlaI	GCGC	3 cut(s)	12, 544, 608
GluI	GCNGC	5 cut(s)	14, 57, 938, 1615, 1857
GsaI	CCCAGC	2 cut(s)	1088, 2009
GsuI	CTGGAG	3 cut(s)	506, 1258, 1796
HaeII	RGCGCY	3 cut(s)	14, 546, 610
HaeIII	GGCC	1 cut(s)	231
HapII	CCGG	3 cut(s)	34, 250, 1776
HgaI	GACGC	2 cut(s)	34, 362
HhaI	GCGC	3 cut(s)	13, 545, 609
Hin1I	GRCGYC	2 cut(s)	11, 373
Hin1II	CATG	5 cut(s)	565, 1180, 1537, 1732, 1918
Hin6I	GCGC	3 cut(s)	11, 543, 607
HinP1I	GCGC	3 cut(s)	11, 543, 607
HincII	GTYRAC	2 cut(s)	180, 1605
HindII	GTYRAC	2 cut(s)	180, 1605
HindIII	AAGCTT	2 cut(s)	1784, 1995
HpaII	CCGG	3 cut(s)	34, 250, 1776
HphI	GGTGA	2 cut(s)	23, 236
Hpy166II	GTNNAC	5 cut(s)	180, 385, 1052, 1283, 1605
Hpy188III	TCNNGA	6 cut(s)	280, 302, 698, 1116, 1534, 2122
Hpy8I	GTNNAC	5 cut(s)	180, 385, 1052, 1283, 1605
Hpy99I	CGWCG	6 cut(s)	22, 25, 28, 184, 378, 1128
HpyAV	CCTTC	5 cut(s)	373, 433, 1312, 1570, 1694
HpyCH4III	ACNGT	4 cut(s)	78, 242, 683, 2200
HpyCH4IV	ACGT	1 cut(s)	182
HpyF10VI	GCNNNNNNNGC	2 cut(s)	470, 1340
HpyF3I	CTNAG	8 cut(s)	68, 516, 557, 804, 931, 1544, 2033, 2110
HpySE526I	ACGT	1 cut(s)	182
Hsp92I	GRCGYC	2 cut(s)	11, 373
Hsp92II	CATG	5 cut(s)	565, 1180, 1537, 1732, 1918
HspAI	GCGC	3 cut(s)	11, 543, 607
KasI	GGCGCC	1 cut(s)	10
Ksp22I	TGATCA	2 cut(s)	115, 1629
LmnI	GCTCC	4 cut(s)	1061, 1239, 1331, 1531
Lsp1109I	GCAGC	2 cut(s)	924, 1843
LweI	GCATC	6 cut(s)	37, 345, 718, 1438, 1486, 1573
MaeI	CTAG	6 cut(s)	359, 546, 597, 1035, 1799, 2051
MaeII	ACGT	1 cut(s)	182
MaeIII	GTNAC	6 cut(s)	242, 1204, 1256, 1666, 2017, 2119
MbiI	CCGCTC	1 cut(s)	72
MfeI	CAATTG	1 cut(s)	732
MflI	RGATCY	2 cut(s)	1112, 1678
Mly113I	GGCGCC	1 cut(s)	11
MlyI	GAGTC	4 cut(s)	225, 1430, 1457, 2234
MmeI	TCCRAC	5 cut(s)	72, 322, 356, 1197, 1966
Mph1103I	ATGCAT	1 cut(s)	1294
MseI	TTAA	4 cut(s)	318, 768, 881, 1689
MslI	CAYNNNNRTG	5 cut(s)	745, 963, 1211, 1297, 1348
MspA1I	CMGCKG	1 cut(s)	1088
MspI	CCGG	3 cut(s)	34, 250, 1776
MspR9I	CCNGG	4 cut(s)	312, 991, 1753, 1814
MunI	CAATTG	1 cut(s)	732
Mva1269I	GAATGC	1 cut(s)	1009
MvaI	CCWGG	4 cut(s)	312, 991, 1753, 1814
MwoI	GCNNNNNNNGC	2 cut(s)	470, 1340
NarI	GGCGCC	1 cut(s)	11
NcoI	CCATGG	2 cut(s)	1176, 1728
NlaIII	CATG	5 cut(s)	565, 1180, 1537, 1732, 1918
NlaIV	GGNNCC	3 cut(s)	12, 1527, 1818
NmuCI	GTSAC	5 cut(s)	242, 1204, 1256, 1666, 2119
NsiI	ATGCAT	1 cut(s)	1294
NspI	RCATGY	1 cut(s)	1918
NspV	TTCGAA	1 cut(s)	870
PaeR7I	CTCGAG	1 cut(s)	2222
PagI	TCATGA	1 cut(s)	1533
PciI	ACATGT	1 cut(s)	1914
PcsI	WCGNNNNNNNCGW	1 cut(s)	2209
PctI	GAATGC	1 cut(s)	1009
PfeI	GAWTC	7 cut(s)	431, 566, 944, 1514, 1880, 1932, 1942
Pfl23II	CGTACG	1 cut(s)	757
PflMI	CCANNNNNTGG	1 cut(s)	1115
PkrI	GCNGC	5 cut(s)	15, 58, 939, 1616, 1858
PleI	GAGTC	4 cut(s)	224, 1429, 1457, 2233
PluTI	GGCGCC	1 cut(s)	14
PpsI	GAGTC	4 cut(s)	224, 1429, 1457, 2233
PpuMI	RGGWCCY	1 cut(s)	650
PscI	ACATGT	1 cut(s)	1914
PshBI	ATTAAT	1 cut(s)	768
PsiI	TTATAA	1 cut(s)	635
Psp5II	RGGWCCY	1 cut(s)	650
Psp6I	CCWGG	4 cut(s)	310, 989, 1751, 1812
PspFI	CCCAGC	2 cut(s)	1084, 2005
PspGI	CCWGG	4 cut(s)	310, 989, 1751, 1812
PspLI	CGTACG	1 cut(s)	757
PspN4I	GGNNCC	3 cut(s)	12, 1527, 1818
PspPI	GGNCC	3 cut(s)	344, 650, 695
PspPPI	RGGWCCY	1 cut(s)	650
PspXI	VCTCGAGB	1 cut(s)	2222
PstI	CTGCAG	2 cut(s)	1234, 1495
PsuI	RGATCY	2 cut(s)	1112, 1678
PvuII	CAGCTG	1 cut(s)	1088
RsaI	GTAC	7 cut(s)	239, 287, 386, 759, 1284, 1845, 2186
RsaNI	GTAC	7 cut(s)	238, 286, 385, 758, 1283, 1844, 2185
RseI	CAYNNNNRTG	5 cut(s)	745, 963, 1211, 1297, 1348
SalI	GTCGAC	1 cut(s)	178
SaqAI	TTAA	4 cut(s)	318, 768, 881, 1689
SatI	GCNGC	5 cut(s)	14, 57, 938, 1615, 1857
Sau96I	GGNCC	3 cut(s)	344, 650, 695
ScaI	AGTACT	1 cut(s)	239
SchI	GAGTC	4 cut(s)	225, 1430, 1457, 2234
ScrFI	CCNGG	4 cut(s)	312, 991, 1753, 1814
SfaNI	GCATC	6 cut(s)	37, 345, 718, 1438, 1486, 1573
SfcI	CTRYAG	4 cut(s)	1230, 1458, 1491, 1834
SfoI	GGCGCC	1 cut(s)	12
Sfr274I	CTCGAG	1 cut(s)	2222
SfuI	TTCGAA	1 cut(s)	870
SinI	GGWCC	3 cut(s)	344, 650, 695
SlaI	CTCGAG	1 cut(s)	2222
SmiMI	CAYNNNNRTG	5 cut(s)	745, 963, 1211, 1297, 1348
SmlI	CTYRAG	2 cut(s)	887, 2222
SmoI	CTYRAG	2 cut(s)	887, 2222
SpeI	ACTAGT	1 cut(s)	1798
SspDI	GGCGCC	1 cut(s)	10
SspMI	CTAG	6 cut(s)	359, 546, 597, 1035, 1799, 2051
StyD4I	CCNGG	4 cut(s)	310, 989, 1751, 1812
StyI	CCWWGG	3 cut(s)	1176, 1662, 1728
TaaI	ACNGT	4 cut(s)	78, 242, 683, 2200
TaiI	ACGT	1 cut(s)	185
TaqI	TCGA	9 cut(s)	179, 279, 421, 592, 846, 870, 2064, 2203, 2223
TatI	WGTACW	4 cut(s)	237, 285, 384, 2184
TauI	GCSGC	3 cut(s)	16, 59, 1617
TfiI	GAWTC	7 cut(s)	431, 566, 944, 1514, 1880, 1932, 1942
Tru1I	TTAA	4 cut(s)	318, 768, 881, 1689
Tru9I	TTAA	4 cut(s)	318, 768, 881, 1689
TscAI	CASTG	3 cut(s)	357, 752, 1265
TseFI	GTSAC	5 cut(s)	242, 1204, 1256, 1666, 2119
TseI	GCWGC	2 cut(s)	937, 1856
Tsp45I	GTSAC	5 cut(s)	242, 1204, 1256, 1666, 2119
TspRI	CASTG	3 cut(s)	357, 752, 1265
Van91I	CCANNNNNTGG	1 cut(s)	1115
VpaK11BI	GGWCC	3 cut(s)	344, 650, 695
VspI	ATTAAT	1 cut(s)	768
XapI	RAATTY	3 cut(s)	1162, 1168, 1895
XceI	RCATGY	1 cut(s)	1918
XhoI	CTCGAG	1 cut(s)	2222
XmiI	GTMKAC	1 cut(s)	179
XspI	CTAG	6 cut(s)	359, 546, 597, 1035, 1799, 2051
ZrmI	AGTACT	1 cut(s)	239
Zsp2I	ATGCAT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.