Squamosa promoter-binding-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G02065 AT1G02065 |
| fragaria_vesca | FvH4_7g10640 FvH4_7g10640 FvH4_7g10640 FvH4_7g10640 FvH4_7g10640 FvH4_7g10640 |
| malus_domestica | MD07G1111500.v1.1 |
| prunus_persica | Prupe.2G134900_v2.0.a1 Prupe.2G134900_v2.0.a1 |
| pyrus_communis | pycom07g09640 |
| rosa_chinensis | RchiOBHm_Chr1g0348581 |
| rosa_laevigata | RLG00000028637 |
| rosa_multiflora | Rmu_sc0008668.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00306910 |
| rosa_rugosa | Rorug01G0195500 Rorug01G0195600 |
| rosa_samantha | Rh1AG213300 Rh1BG179700 Rh1CG197600 Rh1DG209800 |
| rosa_wichuraiana | Rw1G018060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 624 |
| AccII | CGCG | 3 cut(s) | 302, 314, 949 |
| AclWI | GGATC | 4 cut(s) | 72, 85, 403, 464 |
| AcoI | YGGCCR | 2 cut(s) | 475, 765 |
| AcsI | RAATTY | 1 cut(s) | 862 |
| AcuI | CTGAAG | 2 cut(s) | 996, 1005 |
| AcyI | GRCGYC | 1 cut(s) | 625 |
| AfaI | GTAC | 1 cut(s) | 986 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 253, 363, 380, 439, 574, 580, 652 |
| AflIII | ACRYGT | 1 cut(s) | 426 |
| AgsI | TTSAA | 2 cut(s) | 163, 809 |
| AjnI | CCWGG | 4 cut(s) | 452, 530, 535, 573 |
| AluBI | AGCT | 4 cut(s) | 179, 265, 750, 1025 |
| AluI | AGCT | 4 cut(s) | 179, 265, 750, 1025 |
| Alw21I | GWGCWC | 1 cut(s) | 982 |
| AlwI | GGATC | 4 cut(s) | 72, 85, 403, 464 |
| Ama87I | CYCGRG | 1 cut(s) | 362 |
| AoxI | GGCC | 8 cut(s) | 255, 460, 475, 533, 576, 654, 765, 855 |
| ApaI | GGGCCC | 1 cut(s) | 859 |
| ApoI | RAATTY | 1 cut(s) | 862 |
| AspLEI | GCGC | 6 cut(s) | 302, 316, 389, 590, 627, 747 |
| AspS9I | GGNCC | 5 cut(s) | 256, 480, 528, 855, 856 |
| AsuC2I | CCSGG | 1 cut(s) | 859 |
| AsuHPI | GGTGA | 3 cut(s) | 197, 541, 937 |
| AvaI | CYCGRG | 1 cut(s) | 362 |
| AvaII | GGWCC | 2 cut(s) | 480, 528 |
| BaeGI | GKGCMC | 2 cut(s) | 434, 859 |
| BamHI | GGATCC | 1 cut(s) | 77 |
| BanI | GGYRCC | 1 cut(s) | 624 |
| BanII | GRGCYC | 2 cut(s) | 369, 859 |
| Bbv12I | GWGCWC | 1 cut(s) | 982 |
| BccI | CCATC | 4 cut(s) | 77, 258, 281, 723 |
| BceAI | ACGGC | 3 cut(s) | 397, 754, 800 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 109, 119, 143, 153 |
| BciT130I | CCWGG | 4 cut(s) | 454, 532, 537, 575 |
| BciVI | GTATCC | 1 cut(s) | 928 |
| BcnI | CCSGG | 1 cut(s) | 859 |
| BfoI | RGCGCY | 1 cut(s) | 628 |
| BfuI | GTATCC | 1 cut(s) | 928 |
| Bme1390I | CCNGG | 5 cut(s) | 454, 532, 537, 575, 859 |
| Bme18I | GGWCC | 2 cut(s) | 480, 528 |
| BmeT110I | CYCGRG | 1 cut(s) | 362 |
| BmgT120I | GGNCC | 5 cut(s) | 256, 480, 528, 855, 856 |
| BmiI | GGNNCC | 4 cut(s) | 79, 541, 626, 857 |
| BmrFI | CCNGG | 5 cut(s) | 454, 532, 537, 575, 859 |
| BmrI | ACTGGG | 1 cut(s) | 368 |
| BmsI | GCATC | 1 cut(s) | 838 |
| BmuI | ACTGGG | 1 cut(s) | 368 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 536, 568, 632, 664 |
| BpmI | CTGGAG | 1 cut(s) | 436 |
| BpuEI | CTTGAG | 1 cut(s) | 1023 |
| BpuMI | CCSGG | 1 cut(s) | 859 |
| BsaBI | GATNNNNATC | 1 cut(s) | 774 |
| BsaHI | GRCGYC | 1 cut(s) | 625 |
| BsaJI | CCNNGG | 9 cut(s) | 73, 379, 438, 469, 495, 579, 651, 921, 930 |
| BsaWI | WCCGGW | 1 cut(s) | 895 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 44, 74, 200, 230, 338, 368, 434, 464 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 253, 363, 380, 439, 574, 580, 652 |
| Bse118I | RCCGGY | 3 cut(s) | 513, 525, 621 |
| Bse1I | ACTGG | 1 cut(s) | 374 |
| Bse8I | GATNNNNATC | 1 cut(s) | 774 |
| BseBI | CCWGG | 4 cut(s) | 454, 532, 537, 575 |
| BseDI | CCNNGG | 9 cut(s) | 73, 379, 438, 469, 495, 579, 651, 921, 930 |
| BseGI | GGATG | 2 cut(s) | 69, 866 |
| BseJI | GATNNNNATC | 1 cut(s) | 774 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 253, 363, 380, 439, 574, 580, 652 |
| BseMII | CTCAG | 3 cut(s) | 698, 809, 885 |
| BseNI | ACTGG | 1 cut(s) | 374 |
| BseRI | GAGGAG | 3 cut(s) | 171, 174, 177 |
| BseSI | GKGCMC | 2 cut(s) | 434, 859 |
| BseX3I | CGGCCG | 1 cut(s) | 475 |
| BseYI | CCCAGC | 1 cut(s) | 175 |
| BsgI | GTGCAG | 1 cut(s) | 724 |
| Bsh1236I | CGCG | 3 cut(s) | 302, 314, 949 |
| Bsh1285I | CGRYCG | 1 cut(s) | 478 |
| BshFI | GGCC | 8 cut(s) | 257, 462, 477, 535, 578, 656, 767, 857 |
| BshNI | GGYRCC | 1 cut(s) | 624 |
| BsiEI | CGRYCG | 1 cut(s) | 478 |
| BsiHKAI | GWGCWC | 1 cut(s) | 982 |
| BsiHKCI | CYCGRG | 1 cut(s) | 362 |
| BsiSI | CCGG | 7 cut(s) | 478, 514, 526, 622, 754, 859, 896 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 253, 363, 380, 439, 574, 580, 652 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| BsnI | GGCC | 8 cut(s) | 257, 462, 477, 535, 578, 656, 767, 857 |
| BsoBI | CYCGRG | 1 cut(s) | 362 |
| Bsp120I | GGGCCC | 1 cut(s) | 855 |
| Bsp1286I | GDGCHC | 4 cut(s) | 369, 434, 859, 982 |
| Bsp143I | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| BspANI | GGCC | 8 cut(s) | 257, 462, 477, 535, 578, 656, 767, 857 |
| BspCNI | CTCAG | 3 cut(s) | 697, 808, 884 |
| BspFNI | CGCG | 3 cut(s) | 302, 314, 949 |
| BspHI | TCATGA | 1 cut(s) | 507 |
| BspLI | GGNNCC | 4 cut(s) | 79, 541, 626, 857 |
| BspPI | GGATC | 4 cut(s) | 72, 85, 403, 464 |
| BspQI | GCTCTTC | 1 cut(s) | 1024 |
| BspT107I | GGYRCC | 1 cut(s) | 624 |
| BsrFI | RCCGGY | 3 cut(s) | 513, 525, 621 |
| BsrI | ACTGG | 1 cut(s) | 374 |
| BssAI | RCCGGY | 3 cut(s) | 513, 525, 621 |
| BssECI | CCNNGG | 9 cut(s) | 73, 379, 438, 469, 495, 579, 651, 921, 930 |
| BssMI | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| BssNI | GRCGYC | 1 cut(s) | 625 |
| BssT1I | CCWWGG | 2 cut(s) | 469, 651 |
| Bst2UI | CCWGG | 4 cut(s) | 454, 532, 537, 575 |
| Bst4CI | ACNGT | 3 cut(s) | 664, 931, 984 |
| Bst6I | CTCTTC | 2 cut(s) | 752, 1024 |
| BstACI | GRCGYC | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 6 cut(s) | 118, 150, 298, 434, 698, 743 |
| BstDEI | CTNAG | 3 cut(s) | 684, 795, 871 |
| BstDSI | CCRYGG | 4 cut(s) | 73, 379, 438, 930 |
| BstEII | GGTNACC | 1 cut(s) | 925 |
| BstF5I | GGATG | 2 cut(s) | 69, 866 |
| BstFNI | CGCG | 3 cut(s) | 302, 314, 949 |
| BstH2I | RGCGCY | 1 cut(s) | 628 |
| BstHHI | GCGC | 6 cut(s) | 302, 316, 389, 590, 627, 747 |
| BstKTI | GATC | 5 cut(s) | 80, 411, 459, 549, 772 |
| BstMBI | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| BstMCI | CGRYCG | 1 cut(s) | 478 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 702, 747 |
| BstNI | CCWGG | 4 cut(s) | 454, 532, 537, 575 |
| BstNSI | RCATGY | 1 cut(s) | 430 |
| BstPI | GGTNACC | 1 cut(s) | 925 |
| BstSCI | CCNGG | 5 cut(s) | 452, 530, 535, 573, 857 |
| BstSLI | GKGCMC | 2 cut(s) | 434, 859 |
| BstUI | CGCG | 3 cut(s) | 302, 314, 949 |
| BstX2I | RGATCY | 1 cut(s) | 77 |
| BstYI | RGATCY | 1 cut(s) | 77 |
| BstZI | CGGCCG | 1 cut(s) | 475 |
| BsuI | GTATCC | 1 cut(s) | 928 |
| BsuRI | GGCC | 8 cut(s) | 257, 462, 477, 535, 578, 656, 767, 857 |
| BtgI | CCRYGG | 4 cut(s) | 73, 379, 438, 930 |
| BtgZI | GCGATG | 1 cut(s) | 652 |
| BtsCI | GGATG | 2 cut(s) | 69, 866 |
| BtsI | GCAGTG | 2 cut(s) | 707, 942 |
| BtsIMutI | CAGTG | 2 cut(s) | 707, 942 |
| Cac8I | GCNNGC | 6 cut(s) | 118, 150, 298, 434, 698, 743 |
| CciI | TCATGA | 1 cut(s) | 507 |
| CfoI | GCGC | 6 cut(s) | 302, 316, 389, 590, 627, 747 |
| Cfr10I | RCCGGY | 3 cut(s) | 513, 525, 621 |
| Cfr13I | GGNCC | 5 cut(s) | 256, 480, 528, 855, 856 |
| CseI | GACGC | 3 cut(s) | 129, 291, 480 |
| Csp6I | GTAC | 1 cut(s) | 985 |
| CviAII | CATG | 4 cut(s) | 40, 358, 427, 508 |
| CviQI | GTAC | 1 cut(s) | 985 |
| DdeI | CTNAG | 3 cut(s) | 684, 795, 871 |
| DinI | GGCGCC | 1 cut(s) | 626 |
| DpnI | GATC | 5 cut(s) | 79, 410, 458, 548, 771 |
| DpnII | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| EaeI | YGGCCR | 2 cut(s) | 475, 765 |
| EagI | CGGCCG | 1 cut(s) | 475 |
| Eam1104I | CTCTTC | 2 cut(s) | 752, 1024 |
| EarI | CTCTTC | 2 cut(s) | 752, 1024 |
| EciI | GGCGGA | 1 cut(s) | 145 |
| EclXI | CGGCCG | 1 cut(s) | 475 |
| Eco130I | CCWWGG | 2 cut(s) | 469, 651 |
| Eco147I | AGGCCT | 1 cut(s) | 656 |
| Eco24I | GRGCYC | 2 cut(s) | 369, 859 |
| Eco47I | GGWCC | 2 cut(s) | 480, 528 |
| Eco52I | CGGCCG | 1 cut(s) | 475 |
| Eco57I | CTGAAG | 2 cut(s) | 996, 1005 |
| Eco88I | CYCGRG | 1 cut(s) | 362 |
| Eco91I | GGTNACC | 1 cut(s) | 925 |
| EcoO109I | RGGNCCY | 1 cut(s) | 855 |
| EcoO65I | GGTNACC | 1 cut(s) | 925 |
| EcoRI | GAATTC | 1 cut(s) | 862 |
| EcoRII | CCWGG | 4 cut(s) | 452, 530, 535, 573 |
| EcoT14I | CCWWGG | 2 cut(s) | 469, 651 |
| EcoT38I | GRGCYC | 2 cut(s) | 369, 859 |
| EgeI | GGCGCC | 1 cut(s) | 626 |
| EheI | GGCGCC | 1 cut(s) | 626 |
| ErhI | CCWWGG | 2 cut(s) | 469, 651 |
| FaeI | CATG | 4 cut(s) | 43, 361, 430, 511 |
| FaiI | YATR | 6 cut(s) | 41, 138, 359, 404, 428, 509 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| FatI | CATG | 4 cut(s) | 39, 357, 426, 507 |
| FauI | CCCGC | 3 cut(s) | 201, 441, 575 |
| FokI | GGATG | 2 cut(s) | 56, 853 |
| FriOI | GRGCYC | 2 cut(s) | 369, 859 |
| GlaI | GCGC | 6 cut(s) | 301, 315, 388, 589, 626, 746 |
| GsaI | CCCAGC | 1 cut(s) | 179 |
| GsuI | CTGGAG | 1 cut(s) | 436 |
| HaeII | RGCGCY | 1 cut(s) | 628 |
| HaeIII | GGCC | 8 cut(s) | 257, 462, 477, 535, 578, 656, 767, 857 |
| HapII | CCGG | 7 cut(s) | 478, 514, 526, 622, 754, 859, 896 |
| HgaI | GACGC | 3 cut(s) | 129, 291, 480 |
| HhaI | GCGC | 6 cut(s) | 302, 316, 389, 590, 627, 747 |
| Hin1I | GRCGYC | 1 cut(s) | 625 |
| Hin1II | CATG | 4 cut(s) | 43, 361, 430, 511 |
| Hin6I | GCGC | 6 cut(s) | 300, 314, 387, 588, 625, 745 |
| HinP1I | GCGC | 6 cut(s) | 300, 314, 387, 588, 625, 745 |
| HincII | GTYRAC | 1 cut(s) | 681 |
| HindII | GTYRAC | 1 cut(s) | 681 |
| HinfI | GANTC | 7 cut(s) | 59, 65, 682, 690, 711, 805, 899 |
| HpaII | CCGG | 7 cut(s) | 478, 514, 526, 622, 754, 859, 896 |
| HphI | GGTGA | 3 cut(s) | 197, 541, 937 |
| Hpy166II | GTNNAC | 4 cut(s) | 306, 379, 442, 681 |
| Hpy188I | TCNGA | 6 cut(s) | 64, 82, 496, 544, 727, 874 |
| Hpy188III | TCNNGA | 3 cut(s) | 128, 508, 809 |
| Hpy8I | GTNNAC | 4 cut(s) | 306, 379, 442, 681 |
| Hpy99I | CGWCG | 2 cut(s) | 38, 786 |
| HpyAV | CCTTC | 2 cut(s) | 169, 232 |
| HpyCH4III | ACNGT | 3 cut(s) | 664, 931, 984 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 956 |
| HpyCH4V | TGCA | 2 cut(s) | 705, 884 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 702, 747 |
| HpyF3I | CTNAG | 3 cut(s) | 684, 795, 871 |
| HpySE526I | ACGT | 2 cut(s) | 33, 956 |
| Hsp92I | GRCGYC | 1 cut(s) | 625 |
| Hsp92II | CATG | 4 cut(s) | 43, 361, 430, 511 |
| HspAI | GCGC | 6 cut(s) | 300, 314, 387, 588, 625, 745 |
| KasI | GGCGCC | 1 cut(s) | 624 |
| Kzo9I | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| LguI | GCTCTTC | 1 cut(s) | 1024 |
| LmnI | GCTCC | 3 cut(s) | 184, 270, 545 |
| LweI | GCATC | 1 cut(s) | 838 |
| MaeII | ACGT | 2 cut(s) | 33, 956 |
| MaeIII | GTNAC | 1 cut(s) | 925 |
| MalI | GATC | 5 cut(s) | 79, 410, 458, 548, 771 |
| MboI | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| MboII | GAAGA | 4 cut(s) | 710, 769, 1002, 1011 |
| MflI | RGATCY | 1 cut(s) | 77 |
| MhlI | GDGCHC | 4 cut(s) | 369, 434, 859, 982 |
| MluCI | AATT | 1 cut(s) | 862 |
| Mly113I | GGCGCC | 1 cut(s) | 625 |
| MlyI | GAGTC | 3 cut(s) | 53, 676, 908 |
| MmeI | TCCRAC | 2 cut(s) | 105, 939 |
| MseI | TTAA | 2 cut(s) | 237, 1048 |
| MspA1I | CMGCKG | 3 cut(s) | 570, 750, 847 |
| MspI | CCGG | 7 cut(s) | 478, 514, 526, 622, 754, 859, 896 |
| MspR9I | CCNGG | 5 cut(s) | 454, 532, 537, 575, 859 |
| MvaI | CCWGG | 4 cut(s) | 454, 532, 537, 575 |
| MvnI | CGCG | 3 cut(s) | 302, 314, 949 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 702, 747 |
| NarI | GGCGCC | 1 cut(s) | 625 |
| NciI | CCSGG | 1 cut(s) | 859 |
| NdeII | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| NlaIII | CATG | 4 cut(s) | 43, 361, 430, 511 |
| NlaIV | GGNNCC | 4 cut(s) | 79, 541, 626, 857 |
| NmeAIII | GCCGAG | 1 cut(s) | 604 |
| NmuCI | GTSAC | 1 cut(s) | 925 |
| NspI | RCATGY | 1 cut(s) | 430 |
| PagI | TCATGA | 1 cut(s) | 507 |
| PceI | AGGCCT | 1 cut(s) | 656 |
| PciI | ACATGT | 1 cut(s) | 426 |
| PciSI | GCTCTTC | 1 cut(s) | 1024 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 784 |
| PfeI | GAWTC | 4 cut(s) | 65, 690, 711, 805 |
| PflFI | GACNNNGTC | 1 cut(s) | 374 |
| PfoI | TCCNGGA | 1 cut(s) | 452 |
| PleI | GAGTC | 3 cut(s) | 53, 676, 907 |
| PluTI | GGCGCC | 1 cut(s) | 628 |
| PpsI | GAGTC | 3 cut(s) | 53, 676, 907 |
| PscI | ACATGT | 1 cut(s) | 426 |
| Psp6I | CCWGG | 4 cut(s) | 452, 530, 535, 573 |
| PspEI | GGTNACC | 1 cut(s) | 925 |
| PspFI | CCCAGC | 1 cut(s) | 175 |
| PspGI | CCWGG | 4 cut(s) | 452, 530, 535, 573 |
| PspN4I | GGNNCC | 4 cut(s) | 79, 541, 626, 857 |
| PspOMI | GGGCCC | 1 cut(s) | 855 |
| PspPI | GGNCC | 5 cut(s) | 256, 480, 528, 855, 856 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 503, 535 |
| PsuI | RGATCY | 1 cut(s) | 77 |
| PsyI | GACNNNGTC | 1 cut(s) | 374 |
| PvuII | CAGCTG | 1 cut(s) | 750 |
| RsaI | GTAC | 1 cut(s) | 986 |
| RsaNI | GTAC | 1 cut(s) | 985 |
| SapI | GCTCTTC | 1 cut(s) | 1024 |
| SaqAI | TTAA | 2 cut(s) | 237, 1048 |
| Sau3AI | GATC | 5 cut(s) | 77, 408, 456, 546, 769 |
| Sau96I | GGNCC | 5 cut(s) | 256, 480, 528, 855, 856 |
| SchI | GAGTC | 3 cut(s) | 53, 676, 908 |
| ScrFI | CCNGG | 5 cut(s) | 454, 532, 537, 575, 859 |
| SduI | GDGCHC | 4 cut(s) | 369, 434, 859, 982 |
| SfaNI | GCATC | 1 cut(s) | 838 |
| SfoI | GGCGCC | 1 cut(s) | 626 |
| SgrAI | CRCCGGYG | 1 cut(s) | 621 |
| SinI | GGWCC | 2 cut(s) | 480, 528 |
| SmlI | CTYRAG | 1 cut(s) | 1038 |
| SmoI | CTYRAG | 1 cut(s) | 1038 |
| Sse9I | AATT | 1 cut(s) | 862 |
| SseBI | AGGCCT | 1 cut(s) | 656 |
| SspDI | GGCGCC | 1 cut(s) | 624 |
| StuI | AGGCCT | 1 cut(s) | 656 |
| StyD4I | CCNGG | 5 cut(s) | 452, 530, 535, 573, 857 |
| StyI | CCWWGG | 2 cut(s) | 469, 651 |
| TaaI | ACNGT | 3 cut(s) | 664, 931, 984 |
| TaiI | ACGT | 2 cut(s) | 36, 959 |
| TaqI | TCGA | 2 cut(s) | 129, 369 |
| TasI | AATT | 1 cut(s) | 862 |
| TauI | GCSGC | 6 cut(s) | 199, 387, 477, 593, 946, 949 |
| TfiI | GAWTC | 4 cut(s) | 65, 690, 711, 805 |
| Tru1I | TTAA | 2 cut(s) | 237, 1048 |
| Tru9I | TTAA | 2 cut(s) | 237, 1048 |
| TscAI | CASTG | 2 cut(s) | 707, 942 |
| TseFI | GTSAC | 1 cut(s) | 925 |
| Tsp45I | GTSAC | 1 cut(s) | 925 |
| TspDTI | ATGAA | 3 cut(s) | 496, 524, 855 |
| TspGWI | ACGGA | 1 cut(s) | 90 |
| TspRI | CASTG | 2 cut(s) | 707, 942 |
| Tth111I | GACNNNGTC | 1 cut(s) | 374 |
| VpaK11BI | GGWCC | 2 cut(s) | 480, 528 |
| XapI | RAATTY | 1 cut(s) | 862 |
| XceI | RCATGY | 1 cut(s) | 430 |