EF-hand domain pair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73440 AT4G00140 |
| fragaria_vesca | FvH4_7g11100 FvH4_7g11100 |
| malus_domestica | MD02G1210400.v1.1 |
| prunus_persica | Prupe.2G138200_v2.0.a1 Prupe.2G138200_v2.0.a1 |
| pyrus_communis | pycom02g17220 pycom07g10880 |
| rosa_chinensis | RchiOBHm_Chr1g0349121 |
| rosa_laevigata | RLG00000028604 |
| rosa_multiflora | Rmu_sc0008324.1_g000005 Rmu_sc0012100.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00306100 |
| rosa_rugosa | Rorug01G0200300 |
| rosa_samantha | Rh1AG218000 Rh1BG183600 Rh1CG202400 Rh1DG213400 |
| rosa_wichuraiana | Rw1G018530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 95, 146 |
| AfaI | GTAC | 1 cut(s) | 164 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 129 |
| AgsI | TTSAA | 1 cut(s) | 27 |
| AluBI | AGCT | 2 cut(s) | 178, 221 |
| AluI | AGCT | 2 cut(s) | 178, 221 |
| Alw26I | GTCTC | 1 cut(s) | 87 |
| AoxI | GGCC | 1 cut(s) | 251 |
| AsuHPI | GGTGA | 1 cut(s) | 214 |
| BcoDI | GTCTC | 1 cut(s) | 87 |
| BmsI | GCATC | 1 cut(s) | 101 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 129 |
| BseGI | GGATG | 1 cut(s) | 116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 129 |
| BshFI | GGCC | 1 cut(s) | 253 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 129 |
| BsmAI | GTCTC | 1 cut(s) | 87 |
| BsmBI | CGTCTC | 1 cut(s) | 87 |
| BsnI | GGCC | 1 cut(s) | 253 |
| Bsp143I | GATC | 1 cut(s) | 19 |
| BspACI | CCGC | 2 cut(s) | 95, 146 |
| BspANI | GGCC | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 19 |
| Bst4CI | ACNGT | 1 cut(s) | 17 |
| BstF5I | GGATG | 1 cut(s) | 116 |
| BstKTI | GATC | 1 cut(s) | 22 |
| BstMAI | GTCTC | 1 cut(s) | 87 |
| BstMBI | GATC | 1 cut(s) | 19 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 302 |
| BsuRI | GGCC | 1 cut(s) | 253 |
| BtsCI | GGATG | 1 cut(s) | 116 |
| BtsI | GCAGTG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 1 cut(s) | 159 |
| Csp6I | GTAC | 1 cut(s) | 163 |
| CviAII | CATG | 1 cut(s) | 125 |
| CviJI | RGCY | 6 cut(s) | 10, 178, 215, 221, 253, 294 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 178, 215, 221, 253, 294 |
| CviQI | GTAC | 1 cut(s) | 163 |
| DpnI | GATC | 1 cut(s) | 21 |
| DpnII | GATC | 1 cut(s) | 19 |
| Eco147I | AGGCCT | 1 cut(s) | 253 |
| Esp3I | CGTCTC | 1 cut(s) | 87 |
| FaeI | CATG | 1 cut(s) | 128 |
| FaiI | YATR | 1 cut(s) | 126 |
| FatI | CATG | 1 cut(s) | 124 |
| FauI | CCCGC | 1 cut(s) | 139 |
| FokI | GGATG | 1 cut(s) | 123 |
| HaeIII | GGCC | 1 cut(s) | 253 |
| Hin1II | CATG | 1 cut(s) | 128 |
| HinfI | GANTC | 3 cut(s) | 70, 102, 169 |
| HphI | GGTGA | 1 cut(s) | 214 |
| Hpy188I | TCNGA | 3 cut(s) | 87, 107, 174 |
| HpyAV | CCTTC | 4 cut(s) | 27, 37, 55, 278 |
| HpyCH4III | ACNGT | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 2 cut(s) | 114, 191 |
| Hsp92II | CATG | 1 cut(s) | 128 |
| Kzo9I | GATC | 1 cut(s) | 19 |
| LmnI | GCTCC | 2 cut(s) | 149, 275 |
| LpnPI | CCDG | 3 cut(s) | 100, 171, 184 |
| LweI | GCATC | 1 cut(s) | 101 |
| MalI | GATC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 19 |
| MboII | GAAGA | 2 cut(s) | 275, 293 |
| MluCI | AATT | 1 cut(s) | 186 |
| MlyI | GAGTC | 1 cut(s) | 111 |
| MmeI | TCCRAC | 1 cut(s) | 110 |
| MnlI | CCTC | 5 cut(s) | 42, 101, 102, 205, 299 |
| MseI | TTAA | 3 cut(s) | 12, 182, 248 |
| NdeII | GATC | 1 cut(s) | 19 |
| NlaIII | CATG | 1 cut(s) | 128 |
| PceI | AGGCCT | 1 cut(s) | 253 |
| PfeI | GAWTC | 2 cut(s) | 70, 169 |
| PleI | GAGTC | 1 cut(s) | 110 |
| PpsI | GAGTC | 1 cut(s) | 110 |
| RsaI | GTAC | 1 cut(s) | 164 |
| RsaNI | GTAC | 1 cut(s) | 163 |
| SaqAI | TTAA | 3 cut(s) | 12, 182, 248 |
| Sau3AI | GATC | 1 cut(s) | 19 |
| SchI | GAGTC | 1 cut(s) | 111 |
| SetI | ASST | 3 cut(s) | 94, 180, 223 |
| SfaNI | GCATC | 1 cut(s) | 101 |
| Sse9I | AATT | 1 cut(s) | 186 |
| SseBI | AGGCCT | 1 cut(s) | 253 |
| SsiI | CCGC | 2 cut(s) | 95, 146 |
| StuI | AGGCCT | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 17 |
| TasI | AATT | 1 cut(s) | 186 |
| TfiI | GAWTC | 2 cut(s) | 70, 169 |
| Tru1I | TTAA | 3 cut(s) | 12, 182, 248 |
| Tru9I | TTAA | 3 cut(s) | 12, 182, 248 |
| TscAI | CASTG | 1 cut(s) | 159 |
| TspDTI | ATGAA | 1 cut(s) | 141 |
| TspGWI | ACGGA | 1 cut(s) | 69 |
| TspRI | CASTG | 1 cut(s) | 159 |