Rorug01G0200300

EF-hand domain pair

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0011149
Physical Location & Seq
Forward (+)
27971187 .. 27974246
3060 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0200300.1

Sequence Viewer

Length: 3060 bp
ATGGGGTTATCATCTCTATGCTTAATAACTGTGTCCATCTATATCCTTTCAACATTTGTGTTGTTCCATCTTGTGGTGGCCAACTCTTTGCAGTCATATAATACTCCTACTTGCCGTGATGACGAGATCCATGCCTTGCTGCAGTTCAAGCAAAGTTTTGTCGTTAGAAAGTTTGCTTCGGCGGACAAGGGTGCTTATCCAAAGACTTCTTCATGGAAATCAAACAGCAGTTGTTGCTCATGGGATGGCGTAGAGTGTGATGAGAAGACGGGTCACGTGATTGGGCTTGATCTTAGTAGCAGTTGCCTCGATGGCTCTTTCAGCTCCAACAACACCTTATTCTGTCTTGTTCATCTTCAGCGTCTGAACCTCGCTGATAATGACTTCATAGGATCTCAAATTCCTACTAGCATTGGGAAGTTCCCAAGGCTCAGGTATCTCAACCTCTCTTACTCTGTCTTTTCTGGTCATGTCCCATTTGAAGTTTCACAACTGTCTAAGTTGTCTTCCCTTGATCTATCTCGCAATAATGATCTGTCTTCCAATGAAGAATTGTTAAGAAGCCTAGCTCAAAATTTAACTGGCCTACAAACACTTGATCTTTCTTCCATTAATATATCATCCACAGTACCCGACACCCTGACAAATTTGTCTCTTTTGACATCCCTCAACCTTGGTGATTGCGGCCTCTTTGGTAAACTACCAAGAAGAATCTTTAAATTACAGAATTTGAAGGTTTTTAGTGTGAAGGACAACCCCGCTCTCACGGGGTATTTTCCTGATGACTATAGTGGAAGTAGTCCTGATCTCATGTCACTCAAACTCTCGTCCACTAATTTTTTCATCAACCTACCTTCCTTGATAGACAGGTTTCATTCACTGAAAGAGTTGGATGTAAGTTCGTGCAATATTTCAGAAGGTCCAGTACCATTTTCACTTGGTAATCTTAGGGATCTCAACTATTTGGACCTTTCATATAATAAATTTAATGGTCAAATCCCTACAGCTACACTTAGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAATTTAATGGTCAAATCCCTACAGCTACACTTAGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAATTTAATGGTCAAATCCCTACAGCTACACTTAGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAATTTAATGGTCAAATCCCTACAGCTACACTTAGTAATCTTAGGGATCTCATCTATTTGGACCTTTCATATAATAAGTTTAATGGTCAAATCCCTACAGCTATGTTGGGAAACCTTACCCAACTTACATATCTATCACTTTCTAATAATTATTTTCATGGTTCAGTCCCCCAGTCCTTGTTCAATCTCATGAATCTTCAAACCCTCCAGCTAGATCATAATAATTTGAGTGGTACAGTAGAGTTCCAGAAGTTTCTTAACCTACAAAAACTCACCTCTCTAGATCTATCTAATAATAATCTGGAATTGCTCTCAGAATCTAGATTTTTGAATAATGCAACTACTGTACTTCCAAAGTTTCAGTATCTAGGATTGGGTGGGTGCAACATAAGAGAGTTCCCAGATTTCCTAAGATCTCAAGAAGCATTGAATGAGTTAGATCTCTCTGGAAACAAATTGCAAGGCCAAGTACCAAAATGGATGTGGAACACAAGCACTCAAACTCTGTATTACATTAACATTTCACATAACTTGTTGTCAGGCTTCGAGAAATCTCCAGCTGTCCTTCCATGGCTTTACCTTGACACCTTAGACCTTTCATTCAACATGCTTTCTGAATTATTATTGTTGCGTTCAAGATCCATCACGTACTATAACATTGCAAACAACAAATTAACGGGACAAGTTTCACCAATGATTTGCAATATGACTTCTCTTAGATACCTTGATTTGTCAAACAACAAGTTGATTGGTGATCTACCTCAGTGTGGGAGATATTTCAGTGTTAATCTGGAATATCTCAAACTTGGAAACAATTCATTTCATGGAAGTCTTCCTCAATCGTACTCCAATGGAAGCATTTTAAGGATGATAGATATTGGTCACAACAATTTCCATGGGCAACTACCGAGGTCACTAGCGAATTGTACAAGTCTTGAAAGTTTAGTCCTTTCACACAATAATTTTAGTGATACCTTCCCTGTTTGGTTGGGGGCTCTCCCTGAGTTAAAAATTTTGACAATGGACCACAATGTGTTTTATGGAGTGATTCTGAAACCTGATAAGAAGAATCTTCAATTCCCGGTGCTACGTATTCTTGATTTGTCTTACAATAATTTCTCAGGTCAGTTTCCATTTGAATACATTTTTTCTGGAAATGGGACAACAAGTATCACTCATGATTTGGAGTACTACCACTTTTATTCAATTTCTAGTGGGTATTACTCAATCACAATAATCTGTAAAGGTGTGGAGAGATACTACCCAAGAATTCAAGAGGACCTGATACTTATTGACATCTCAAGCAACAATTTTGAAGGGAAGATTCCTGAATTCATTGGGAAACTTGAGGGGATTTGGTCACTCAATCTCTCCAATAACATTCTCACGGGTCACATCCCATCATCCTTGAGCAACTTATCAAGGCTTGAATCGTTGGATCTTTCACATAACAAGCTCTCTGGTGAGATTCCTCAGCAACTGGCACAACTTGATTCTCTCTCAAAGTTCAATGTCTCTCACAACAATCTCACAGGCCCTGTACCACGGGGAATCCACTTCACTACATTTGACAGCACTTCATATCTGGGAAACCAAGGATTGTGCGGAGATTTCTTGCCAAAGAAATGTGGAAATTCTGAGGGCACTCAACTTCCACCTTCAACATCAGAAGATAATGACTCGGGCTCTGGAATTGAATTGGATTGGAAATTTGTTGTGGCAGGGTCAGGGAGTGGCTTGTTGGTGGGAGTGGTTCTTGCAGACTTTGTGATTACCAAGTGGAATGTGTGGTTCATTGAGATTGTTGCAGTAATGATCATGTTTTCGAAAAGGATAAGGAAGCCTAGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_7 EF-hand_8

Protein Analysis

1019

Amino Acids

114.01

Weight (kDa)

6.01

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 87 8.6e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 283 - 375 6.8e-06 Leucine-rich repeat region
LRR_8 PF13855 293 - 354 1e-05 Leucine rich repeat
LRR_8 PF13855 319 - 379 2.5e-07 Leucine rich repeat
LRR_14 PF23598 354 - 577 3.6e-14 Leucine-rich repeat region
LRR_8 PF13855 408 - 453 6e-06 Leucine rich repeat
LRR_8 PF13855 690 - 746 4.6e-07 Leucine rich repeat
LRR_8 PF13855 856 - 912 1.8e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011149)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73440 AT4G00140
fragaria_vesca FvH4_7g11100 FvH4_7g11100
malus_domestica MD02G1210400.v1.1
prunus_persica Prupe.2G138200_v2.0.a1 Prupe.2G138200_v2.0.a1
pyrus_communis pycom02g17220 pycom07g10880
rosa_chinensis RchiOBHm_Chr1g0349121
rosa_laevigata RLG00000028604
rosa_multiflora Rmu_sc0008324.1_g000005 Rmu_sc0012100.1_g000007
rosa_roxburghii Rroxscaffold_4G00306100
rosa_rugosa Rorug01G0200300
rosa_samantha Rh1AG218000 Rh1BG183600 Rh1CG202400 Rh1DG213400
rosa_wichuraiana Rw1G018530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 649
AccB7I CCANNNNNTGG 1 cut(s) 73
AccBSI CCGCTC 1 cut(s) 761
AciI CCGC 4 cut(s) 182, 684, 759, 2811
AclWI GGATC 9 cut(s) 121, 400, 960, 1035, 1110, 1185, 1260, 1839, 2652
AcoI YGGCCR 1 cut(s) 78
AcuI CTGAAG 1 cut(s) 341
AcvI CACGTG 1 cut(s) 277
AdeI CACNNNGTG 1 cut(s) 2239
AfiI CCNNNNNNNGG 2 cut(s) 73, 1973
AjuI GAANNNNNNNTTGG 2 cut(s) 193, 225
Alw26I GTCTC 2 cut(s) 657, 2725
AlwI GGATC 9 cut(s) 121, 400, 960, 1035, 1110, 1185, 1260, 1839, 2652
AlwNI CAGNNNCTG 3 cut(s) 364, 2686, 2744
Ama87I CYCGRG 1 cut(s) 2887
AoxI GGCC 5 cut(s) 78, 583, 685, 1669, 2740
ApeKI GCWGC 1 cut(s) 139
AseI ATTAAT 1 cut(s) 612
Asp700I GAANNNNTTC 1 cut(s) 2020
AspS9I GGNCC 9 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485, 2741
AsuC2I CCSGG 1 cut(s) 2288
AsuHPI GGTGA 5 cut(s) 689, 1471, 1887, 1970, 2681
AsuII TTCGAA 1 cut(s) 3032
AvaI CYCGRG 1 cut(s) 2887
AvaII GGWCC 8 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485
BaeGI GKGCMC 1 cut(s) 2852
BalI TGGCCA 1 cut(s) 80
BanII GRGCYC 2 cut(s) 2203, 2894
BarI GAAGNNNNNNTAC 2 cut(s) 909, 941
BbrPI CACGTG 1 cut(s) 277
BbsI GAAGAC 4 cut(s) 272, 498, 531, 2030
BbvCI CCTCAGC 1 cut(s) 2679
BbvI GCAGC 1 cut(s) 126
BccI CCATC 6 cut(s) 44, 75, 239, 305, 1856, 2614
BceAI ACGGC 1 cut(s) 99
BcgI CGANNNNNNTGC 4 cut(s) 113, 147, 289, 323
BclI TGATCA 1 cut(s) 3021
BcnI CCSGG 1 cut(s) 2288
BcoDI GTCTC 2 cut(s) 657, 2725
BfaI CTAG 9 cut(s) 408, 566, 1418, 1487, 1527, 1574, 2123, 2418, 3051
BfmI CTRYAG 7 cut(s) 140, 787, 1002, 1077, 1152, 1227, 1302
BglI GCCNNNNNGGC 1 cut(s) 312
BglII AGATCT 3 cut(s) 1489, 1619, 1645
BisI GCNGC 2 cut(s) 140, 685
BlsI GCNGC 2 cut(s) 141, 686
BmcAI AGTACT 1 cut(s) 2396
Bme1390I CCNGG 1 cut(s) 2288
Bme18I GGWCC 8 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485
BmeT110I CYCGRG 1 cut(s) 2887
BmgT120I GGNCC 9 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485, 2741
BmrFI CCNGG 1 cut(s) 2288
BmrI ACTGGG 1 cut(s) 1372
BmuI ACTGGG 1 cut(s) 1372
BpiI GAAGAC 4 cut(s) 272, 498, 531, 2030
BpmI CTGGAG 2 cut(s) 1397, 1746
Bpu10I CCTNAGC 2 cut(s) 431, 2679
Bpu14I TTCGAA 1 cut(s) 3032
BpuEI CTTGAG 4 cut(s) 1608, 2491, 2573, 2635
BpuMI CCSGG 1 cut(s) 2288
BsaAI YACGTR 3 cut(s) 277, 1854, 2297
BsaJI CCNNGG 7 cut(s) 425, 673, 1775, 2101, 2114, 2750, 2800
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 1973
Bse1I ACTGG 4 cut(s) 586, 923, 1378, 2691
Bse3DI GCAATG 1 cut(s) 1863
BseDI CCNNGG 7 cut(s) 425, 673, 1775, 2101, 2114, 2750, 2800
BseGI GGATG 8 cut(s) 250, 620, 662, 898, 1692, 2079, 2601, 2609
BseLI CCNNNNNNNGG 2 cut(s) 73, 1973
BseMI GCAATG 1 cut(s) 1863
BseMII CTCAG 7 cut(s) 445, 1533, 1982, 2199, 2340, 2693, 2835
BseNI ACTGG 4 cut(s) 586, 923, 1378, 2691
BseSI GKGCMC 1 cut(s) 2852
BseXI GCAGC 1 cut(s) 126
BshFI GGCC 5 cut(s) 80, 585, 687, 1671, 2742
BsiHKCI CYCGRG 1 cut(s) 2887
BsiSI CCGG 1 cut(s) 2288
BslFI GGGAC 4 cut(s) 458, 1358, 1899, 2380
BslI CCNNNNNNNGG 2 cut(s) 73, 1973
BsmAI GTCTC 2 cut(s) 657, 2725
BsmFI GGGAC 4 cut(s) 458, 1358, 1899, 2380
BsnI GGCC 5 cut(s) 80, 585, 687, 1671, 2742
BsoBI CYCGRG 1 cut(s) 2887
Bsp119I TTCGAA 1 cut(s) 3032
Bsp1286I GDGCHC 3 cut(s) 2203, 2852, 2894
Bsp1407I TGTACA 1 cut(s) 2132
Bsp19I CCATGG 2 cut(s) 1775, 2101
BspACI CCGC 4 cut(s) 182, 684, 759, 2811
BspANI GGCC 5 cut(s) 80, 585, 687, 1671, 2742
BspCNI CTCAG 7 cut(s) 444, 1532, 1981, 2200, 2339, 2692, 2836
BspHI TCATGA 2 cut(s) 1395, 2383
BspMAI CTGCAG 1 cut(s) 144
BspPI GGATC 9 cut(s) 121, 400, 960, 1035, 1110, 1185, 1260, 1839, 2652
BspT104I TTCGAA 1 cut(s) 3032
BsrBI CCGCTC 1 cut(s) 761
BsrDI GCAATG 1 cut(s) 1863
BsrGI TGTACA 1 cut(s) 2132
BsrI ACTGG 4 cut(s) 586, 923, 1378, 2691
BssECI CCNNGG 7 cut(s) 425, 673, 1775, 2101, 2114, 2750, 2800
BssT1I CCWWGG 5 cut(s) 425, 673, 1775, 2101, 2800
Bst4CI ACNGT 5 cut(s) 31, 495, 628, 1444, 1552
BstAPI GCANNNNNTGC 1 cut(s) 234
BstAUI TGTACA 1 cut(s) 2132
BstBAI YACGTR 3 cut(s) 277, 1854, 2297
BstBI TTCGAA 1 cut(s) 3032
BstDSI CCRYGG 3 cut(s) 1775, 2101, 2750
BstF5I GGATG 8 cut(s) 250, 620, 662, 898, 1692, 2079, 2601, 2609
BstMAI GTCTC 2 cut(s) 657, 2725
BstMWI GCNNNNNNNGC 4 cut(s) 148, 234, 312, 321
BstNSI RCATGY 1 cut(s) 1816
BstSCI CCNGG 1 cut(s) 2286
BstSFI CTRYAG 7 cut(s) 140, 787, 1002, 1077, 1152, 1227, 1302
BstSLI GKGCMC 1 cut(s) 2852
BstSNI TACGTA 1 cut(s) 2297
BstV1I GCAGC 1 cut(s) 126
BstV2I GAAGAC 4 cut(s) 272, 498, 531, 2030
BsuRI GGCC 5 cut(s) 80, 585, 687, 1671, 2742
BtgI CCRYGG 3 cut(s) 1775, 2101, 2750
BtsCI GGATG 8 cut(s) 250, 620, 662, 898, 1692, 2079, 2601, 2609
BtsIMutI CAGTG 3 cut(s) 878, 1976, 1993
CaiI CAGNNNCTG 3 cut(s) 364, 2686, 2744
CciI TCATGA 2 cut(s) 1395, 2383
Cfr13I GGNCC 9 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485, 2741
CseI GACGC 1 cut(s) 350
DraI TTTAAA 1 cut(s) 718
DraIII CACNNNGTG 1 cut(s) 2239
DrdI GACNNNNNNGTC 1 cut(s) 649
DseDI GACNNNNNNGTC 1 cut(s) 649
EaeI YGGCCR 1 cut(s) 78
EciI GGCGGA 1 cut(s) 197
Eco105I TACGTA 1 cut(s) 2297
Eco130I CCWWGG 5 cut(s) 425, 673, 1775, 2101, 2800
Eco24I GRGCYC 2 cut(s) 2203, 2894
Eco47I GGWCC 8 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485
Eco57I CTGAAG 1 cut(s) 341
Eco72I CACGTG 1 cut(s) 277
Eco88I CYCGRG 1 cut(s) 2887
EcoO109I RGGNCCY 2 cut(s) 2485, 2741
EcoRI GAATTC 2 cut(s) 2475, 2537
EcoT14I CCWWGG 5 cut(s) 425, 673, 1775, 2101, 2800
EcoT38I GRGCYC 2 cut(s) 2203, 2894
ErhI CCWWGG 5 cut(s) 425, 673, 1775, 2101, 2800
FaqI GGGAC 4 cut(s) 458, 1358, 1899, 2380
FauI CCCGC 1 cut(s) 766
FbaI TGATCA 1 cut(s) 3021
Fnu4HI GCNGC 2 cut(s) 140, 685
FokI GGATG 8 cut(s) 257, 607, 649, 905, 1699, 2086, 2588, 2596
FriOI GRGCYC 2 cut(s) 2203, 2894
Fsp4HI GCNGC 2 cut(s) 140, 685
FspBI CTAG 9 cut(s) 408, 566, 1418, 1487, 1527, 1574, 2123, 2418, 3051
GluI GCNGC 2 cut(s) 140, 685
GsuI CTGGAG 2 cut(s) 1397, 1746
HaeIII GGCC 5 cut(s) 80, 585, 687, 1671, 2742
HapII CCGG 1 cut(s) 2288
HgaI GACGC 1 cut(s) 350
HpaII CCGG 1 cut(s) 2288
HphI GGTGA 5 cut(s) 689, 1471, 1887, 1970, 2681
Hpy166II GTNNAC 2 cut(s) 698, 831
Hpy188I TCNGA 7 cut(s) 366, 916, 1522, 1822, 2259, 2845, 2875
Hpy8I GTNNAC 2 cut(s) 698, 831
HpyAV CCTTC 8 cut(s) 727, 742, 864, 911, 1781, 2191, 2516, 2874
HpyCH4III ACNGT 5 cut(s) 31, 495, 628, 1444, 1552
HpyCH4IV ACGT 3 cut(s) 276, 1853, 2296
HpyF10VI GCNNNNNNNGC 4 cut(s) 148, 234, 312, 321
HpySE526I ACGT 3 cut(s) 276, 1853, 2296
Ksp22I TGATCA 1 cut(s) 3021
LmnI GCTCC 1 cut(s) 329
Lsp1109I GCAGC 1 cut(s) 126
MaeI CTAG 9 cut(s) 408, 566, 1418, 1487, 1527, 1574, 2123, 2418, 3051
MaeII ACGT 3 cut(s) 276, 1853, 2296
MaeIII GTNAC 6 cut(s) 272, 813, 2087, 2118, 2565, 2597
MbiI CCGCTC 1 cut(s) 761
MhlI GDGCHC 3 cut(s) 2203, 2852, 2894
MlsI TGGCCA 1 cut(s) 80
MluNI TGGCCA 1 cut(s) 80
MlyI GAGTC 1 cut(s) 2879
MmeI TCCRAC 3 cut(s) 351, 870, 2622
Mox20I TGGCCA 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 2020
MscI TGGCCA 1 cut(s) 80
MslI CAYNNNNRTG 1 cut(s) 16
Msp20I TGGCCA 1 cut(s) 80
MspA1I CMGCKG 1 cut(s) 1766
MspI CCGG 1 cut(s) 2288
MspR9I CCNGG 1 cut(s) 2288
MwoI GCNNNNNNNGC 4 cut(s) 148, 234, 312, 321
NciI CCSGG 1 cut(s) 2288
NcoI CCATGG 2 cut(s) 1775, 2101
NmuCI GTSAC 6 cut(s) 272, 813, 2087, 2118, 2565, 2597
NspI RCATGY 1 cut(s) 1816
NspV TTCGAA 1 cut(s) 3032
PagI TCATGA 2 cut(s) 1395, 2383
PdmI GAANNNNTTC 1 cut(s) 2020
PflMI CCANNNNNTGG 1 cut(s) 73
PkrI GCNGC 2 cut(s) 141, 686
PleI GAGTC 1 cut(s) 2879
PmaCI CACGTG 1 cut(s) 277
PmlI CACGTG 1 cut(s) 277
PpsI GAGTC 1 cut(s) 2879
Ppu21I YACGTR 3 cut(s) 277, 1854, 2297
PpuMI RGGWCCY 1 cut(s) 2485
PshBI ATTAAT 1 cut(s) 612
Psp5II RGGWCCY 1 cut(s) 2485
PspCI CACGTG 1 cut(s) 277
PspPI GGNCC 9 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485, 2741
PspPPI RGGWCCY 1 cut(s) 2485
PstI CTGCAG 1 cut(s) 144
PstNI CAGNNNCTG 3 cut(s) 364, 2686, 2744
PvuII CAGCTG 1 cut(s) 1766
RseI CAYNNNNRTG 1 cut(s) 16
SatI GCNGC 2 cut(s) 140, 685
Sau96I GGNCC 9 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485, 2741
ScaI AGTACT 1 cut(s) 2396
SchI GAGTC 1 cut(s) 2879
ScrFI CCNGG 1 cut(s) 2288
SduI GDGCHC 3 cut(s) 2203, 2852, 2894
SfcI CTRYAG 7 cut(s) 140, 787, 1002, 1077, 1152, 1227, 1302
SfuI TTCGAA 1 cut(s) 3032
SinI GGWCC 8 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485
SmiMI CAYNNNNRTG 1 cut(s) 16
SmlI CTYRAG 4 cut(s) 1623, 2506, 2552, 2614
SmoI CTYRAG 4 cut(s) 1623, 2506, 2552, 2614
SnaBI TACGTA 1 cut(s) 2297
SsiI CCGC 4 cut(s) 182, 684, 759, 2811
SspI AATATT 1 cut(s) 910
SspMI CTAG 9 cut(s) 408, 566, 1418, 1487, 1527, 1574, 2123, 2418, 3051
StyD4I CCNGG 1 cut(s) 2286
StyI CCWWGG 5 cut(s) 425, 673, 1775, 2101, 2800
TaaI ACNGT 5 cut(s) 31, 495, 628, 1444, 1552
TaiI ACGT 3 cut(s) 279, 1856, 2299
TaqI TCGA 3 cut(s) 309, 1752, 3032
TatI WGTACW 3 cut(s) 1552, 2132, 2394
TauI GCSGC 1 cut(s) 687
TscAI CASTG 3 cut(s) 885, 1976, 1993
TseFI GTSAC 6 cut(s) 272, 813, 2087, 2118, 2565, 2597
TseI GCWGC 1 cut(s) 139
Tsp45I GTSAC 6 cut(s) 272, 813, 2087, 2118, 2565, 2597
TspRI CASTG 3 cut(s) 885, 1976, 1993
Van91I CCANNNNNTGG 1 cut(s) 73
VpaK11BI GGWCC 8 cut(s) 920, 967, 1042, 1117, 1192, 1267, 2230, 2485
VspI ATTAAT 1 cut(s) 612
XbaI TCTAGA 2 cut(s) 1486, 1526
XceI RCATGY 1 cut(s) 1816
XcmI CCANNNNNNNNNTGG 1 cut(s) 1686
XmnI GAANNNNTTC 1 cut(s) 2020
XspI CTAG 9 cut(s) 408, 566, 1418, 1487, 1527, 1574, 2123, 2418, 3051
ZrmI AGTACT 1 cut(s) 2396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.