Assembly, mitochondrial proton-transport ATP synth complex
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35790 |
| fragaria_vesca | FvH4_7g20020 |
| malus_domestica | MD01G1111700.v1.1 MD07G1177900.v1.1 |
| prunus_persica | Prupe.2G217200_v2.0.a1 Prupe.2G217200_v2.0.a1 |
| pyrus_communis | pycom01g13890 pycom07g17170 pycom07g17180 |
| rosa_chinensis | RchiOBHm_Chr1g0363981 |
| rosa_laevigata | RLG00000027531 |
| rosa_multiflora | Rmu_sc0001607.1_g000014 Rmu_ssc0000167.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00292790 |
| rosa_rugosa | Rorug01G0311700 Rorug01G0311800 |
| rosa_samantha | Rh1BG282700 Rh1DG314100 |
| rosa_wichuraiana | Rw1G028330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 117 |
| AciI | CCGC | 1 cut(s) | 164 |
| AcoI | YGGCCR | 1 cut(s) | 56 |
| AcsI | RAATTY | 1 cut(s) | 196 |
| Ama87I | CYCGRG | 1 cut(s) | 28 |
| AoxI | GGCC | 3 cut(s) | 56, 74, 93 |
| ApoI | RAATTY | 1 cut(s) | 196 |
| AvaI | CYCGRG | 1 cut(s) | 28 |
| BclI | TGATCA | 1 cut(s) | 124 |
| BmeT110I | CYCGRG | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 1 cut(s) | 29 |
| BseDI | CCNNGG | 1 cut(s) | 29 |
| BseGI | GGATG | 1 cut(s) | 24 |
| BshFI | GGCC | 3 cut(s) | 58, 76, 95 |
| BsiHKCI | CYCGRG | 1 cut(s) | 28 |
| BsiSI | CCGG | 1 cut(s) | 55 |
| BsnI | GGCC | 3 cut(s) | 58, 76, 95 |
| BsoBI | CYCGRG | 1 cut(s) | 28 |
| Bsp143I | GATC | 1 cut(s) | 124 |
| BspACI | CCGC | 1 cut(s) | 164 |
| BspANI | GGCC | 3 cut(s) | 58, 76, 95 |
| BspHI | TCATGA | 1 cut(s) | 178 |
| BssECI | CCNNGG | 1 cut(s) | 29 |
| BssMI | GATC | 1 cut(s) | 124 |
| BstC8I | GCNNGC | 2 cut(s) | 15, 60 |
| BstF5I | GGATG | 1 cut(s) | 24 |
| BstKTI | GATC | 1 cut(s) | 127 |
| BstMBI | GATC | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BsuRI | GGCC | 3 cut(s) | 58, 76, 95 |
| BtsCI | GGATG | 1 cut(s) | 24 |
| Cac8I | GCNNGC | 2 cut(s) | 15, 60 |
| CciI | TCATGA | 1 cut(s) | 178 |
| CseI | GACGC | 1 cut(s) | 128 |
| CviAII | CATG | 2 cut(s) | 9, 179 |
| CviJI | RGCY | 6 cut(s) | 13, 58, 76, 95, 143, 188 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 58, 76, 95, 143, 188 |
| DpnI | GATC | 1 cut(s) | 126 |
| DpnII | GATC | 1 cut(s) | 124 |
| EaeI | YGGCCR | 1 cut(s) | 56 |
| Eco32I | GATATC | 1 cut(s) | 52 |
| Eco88I | CYCGRG | 1 cut(s) | 28 |
| EcoRV | GATATC | 1 cut(s) | 52 |
| FaeI | CATG | 2 cut(s) | 12, 182 |
| FaiI | YATR | 4 cut(s) | 10, 135, 180, 202 |
| FatI | CATG | 2 cut(s) | 8, 178 |
| FauI | CCCGC | 1 cut(s) | 171 |
| FbaI | TGATCA | 1 cut(s) | 124 |
| FblI | GTMKAC | 1 cut(s) | 117 |
| FokI | GGATG | 1 cut(s) | 11 |
| HaeIII | GGCC | 3 cut(s) | 58, 76, 95 |
| HapII | CCGG | 1 cut(s) | 55 |
| HgaI | GACGC | 1 cut(s) | 128 |
| Hin1II | CATG | 2 cut(s) | 12, 182 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HinfI | GANTC | 1 cut(s) | 182 |
| HpaII | CCGG | 1 cut(s) | 55 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188I | TCNGA | 1 cut(s) | 49 |
| Hpy188III | TCNNGA | 2 cut(s) | 28, 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| Hpy99I | CGWCG | 1 cut(s) | 122 |
| HpyCH4V | TGCA | 1 cut(s) | 17 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| Hsp92II | CATG | 2 cut(s) | 12, 182 |
| Ksp22I | TGATCA | 1 cut(s) | 124 |
| Kzo9I | GATC | 1 cut(s) | 124 |
| LpnPI | CCDG | 2 cut(s) | 68, 72 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 126 |
| MboI | GATC | 1 cut(s) | 124 |
| MluCI | AATT | 1 cut(s) | 196 |
| MlyI | GAGTC | 1 cut(s) | 191 |
| MnlI | CCTC | 1 cut(s) | 24 |
| MseI | TTAA | 3 cut(s) | 39, 90, 192 |
| MspI | CCGG | 1 cut(s) | 55 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NdeII | GATC | 1 cut(s) | 124 |
| NlaIII | CATG | 2 cut(s) | 12, 182 |
| NmuCI | GTSAC | 1 cut(s) | 82 |
| PagI | TCATGA | 1 cut(s) | 178 |
| PleI | GAGTC | 1 cut(s) | 190 |
| PpsI | GAGTC | 1 cut(s) | 190 |
| SalI | GTCGAC | 1 cut(s) | 116 |
| SaqAI | TTAA | 3 cut(s) | 39, 90, 192 |
| Sau3AI | GATC | 1 cut(s) | 124 |
| SchI | GAGTC | 1 cut(s) | 191 |
| Sse9I | AATT | 1 cut(s) | 196 |
| SsiI | CCGC | 1 cut(s) | 164 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 1 cut(s) | 196 |
| Tru1I | TTAA | 3 cut(s) | 39, 90, 192 |
| Tru9I | TTAA | 3 cut(s) | 39, 90, 192 |
| TseFI | GTSAC | 1 cut(s) | 82 |
| Tsp45I | GTSAC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 13 |
| XapI | RAATTY | 1 cut(s) | 196 |
| XmiI | GTMKAC | 1 cut(s) | 117 |