Two-component response regulator-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 |
| malus_domestica | MD01G1114400.v1.1 MD07G1182300.v1.1 MD07G1182500.v1.1 |
| pyrus_communis | pycom01g14340 pycom07g17500 |
| rosa_chinensis | RchiOBHm_Chr1g0364431 |
| rosa_laevigata | RLG00000027480 |
| rosa_multiflora | Rmu_sc0001342.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00291850 Rroxscaffold_4G00292280 |
| rosa_rugosa | Rorug01G0316100 |
| rosa_samantha | Rh1AG324400 Rh1BG287100 Rh1CG303700 Rh1DG318600 |
| rosa_wichuraiana | Rw1G028750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 328 |
| AciI | CCGC | 3 cut(s) | 50, 178, 577 |
| AcuI | CTGAAG | 1 cut(s) | 251 |
| AfaI | GTAC | 2 cut(s) | 168, 496 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 202 |
| AgsI | TTSAA | 2 cut(s) | 71, 541 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 177, 209 |
| AluBI | AGCT | 2 cut(s) | 193, 335 |
| AluI | AGCT | 2 cut(s) | 193, 335 |
| Alw26I | GTCTC | 1 cut(s) | 231 |
| AoxI | GGCC | 1 cut(s) | 715 |
| AspLEI | GCGC | 1 cut(s) | 524 |
| AspS9I | GGNCC | 2 cut(s) | 29, 436 |
| AsuHPI | GGTGA | 2 cut(s) | 415, 764 |
| AsuII | TTCGAA | 1 cut(s) | 550 |
| AvaII | GGWCC | 2 cut(s) | 29, 436 |
| BanII | GRGCYC | 1 cut(s) | 123 |
| BccI | CCATC | 4 cut(s) | 89, 167, 251, 511 |
| BcoDI | GTCTC | 1 cut(s) | 231 |
| BfaI | CTAG | 3 cut(s) | 161, 242, 609 |
| BfmI | CTRYAG | 1 cut(s) | 651 |
| BglII | AGATCT | 1 cut(s) | 352 |
| BisI | GCNGC | 1 cut(s) | 578 |
| BlsI | GCNGC | 1 cut(s) | 579 |
| Bme18I | GGWCC | 2 cut(s) | 29, 436 |
| BmgT120I | GGNCC | 2 cut(s) | 29, 436 |
| BmiI | GGNNCC | 1 cut(s) | 122 |
| BmrI | ACTGGG | 1 cut(s) | 393 |
| BmsI | GCATC | 1 cut(s) | 420 |
| BmuI | ACTGGG | 1 cut(s) | 393 |
| Bpu14I | TTCGAA | 1 cut(s) | 550 |
| Bsa29I | ATCGAT | 2 cut(s) | 414, 515 |
| BsaI | GGTCTC | 1 cut(s) | 231 |
| BsaJI | CCNNGG | 2 cut(s) | 196, 718 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 177, 207, 613, 643 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 202 |
| Bse1I | ACTGG | 2 cut(s) | 399, 694 |
| Bse3DI | GCAATG | 1 cut(s) | 31 |
| BseCI | ATCGAT | 2 cut(s) | 414, 515 |
| BseDI | CCNNGG | 2 cut(s) | 196, 718 |
| BseGI | GGATG | 3 cut(s) | 21, 100, 751 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BseMI | GCAATG | 1 cut(s) | 31 |
| BseMII | CTCAG | 1 cut(s) | 762 |
| BseNI | ACTGG | 2 cut(s) | 399, 694 |
| BseRI | GAGGAG | 3 cut(s) | 221, 410, 686 |
| BshFI | GGCC | 1 cut(s) | 717 |
| BshVI | ATCGAT | 2 cut(s) | 414, 515 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 202 |
| BsmAI | GTCTC | 1 cut(s) | 231 |
| BsnI | GGCC | 1 cut(s) | 717 |
| Bso31I | GGTCTC | 1 cut(s) | 231 |
| Bsp119I | TTCGAA | 1 cut(s) | 550 |
| Bsp1286I | GDGCHC | 1 cut(s) | 123 |
| Bsp143I | GATC | 3 cut(s) | 352, 370, 415 |
| BspACI | CCGC | 3 cut(s) | 50, 178, 577 |
| BspANI | GGCC | 1 cut(s) | 717 |
| BspCNI | CTCAG | 1 cut(s) | 763 |
| BspDI | ATCGAT | 2 cut(s) | 414, 515 |
| BspLI | GGNNCC | 1 cut(s) | 122 |
| BspT104I | TTCGAA | 1 cut(s) | 550 |
| BspTNI | GGTCTC | 1 cut(s) | 231 |
| BsrDI | GCAATG | 1 cut(s) | 31 |
| BsrI | ACTGG | 2 cut(s) | 399, 694 |
| BssECI | CCNNGG | 2 cut(s) | 196, 718 |
| BssMI | GATC | 3 cut(s) | 352, 370, 415 |
| BssNAI | GTATAC | 1 cut(s) | 329 |
| BssT1I | CCWWGG | 2 cut(s) | 196, 718 |
| Bst1107I | GTATAC | 1 cut(s) | 329 |
| Bst4CI | ACNGT | 1 cut(s) | 499 |
| BstBI | TTCGAA | 1 cut(s) | 550 |
| BstC8I | GCNNGC | 2 cut(s) | 48, 180 |
| BstDEI | CTNAG | 3 cut(s) | 90, 346, 771 |
| BstF5I | GGATG | 3 cut(s) | 21, 100, 751 |
| BstHHI | GCGC | 1 cut(s) | 524 |
| BstKTI | GATC | 3 cut(s) | 355, 373, 418 |
| BstMAI | GTCTC | 1 cut(s) | 231 |
| BstMBI | GATC | 3 cut(s) | 352, 370, 415 |
| BstSFI | CTRYAG | 1 cut(s) | 651 |
| BstX2I | RGATCY | 1 cut(s) | 352 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 433 |
| BstYI | RGATCY | 1 cut(s) | 352 |
| BstZ17I | GTATAC | 1 cut(s) | 329 |
| Bsu15I | ATCGAT | 2 cut(s) | 414, 515 |
| BsuRI | GGCC | 1 cut(s) | 717 |
| BsuTUI | ATCGAT | 2 cut(s) | 414, 515 |
| BtsCI | GGATG | 3 cut(s) | 21, 100, 751 |
| BtsIMutI | CAGTG | 2 cut(s) | 687, 768 |
| Cac8I | GCNNGC | 2 cut(s) | 48, 180 |
| CfoI | GCGC | 1 cut(s) | 524 |
| Cfr13I | GGNCC | 2 cut(s) | 29, 436 |
| ClaI | ATCGAT | 2 cut(s) | 414, 515 |
| Csp6I | GTAC | 2 cut(s) | 167, 495 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 745, 780 |
| CviAII | CATG | 3 cut(s) | 170, 365, 394 |
| CviJI | RGCY | 6 cut(s) | 121, 193, 300, 335, 544, 717 |
| CviKI_1 | RGCY | 6 cut(s) | 121, 193, 300, 335, 544, 717 |
| CviQI | GTAC | 2 cut(s) | 167, 495 |
| DdeI | CTNAG | 3 cut(s) | 90, 346, 771 |
| DpnI | GATC | 3 cut(s) | 354, 372, 417 |
| DpnII | GATC | 3 cut(s) | 352, 370, 415 |
| Eco130I | CCWWGG | 2 cut(s) | 196, 718 |
| Eco24I | GRGCYC | 1 cut(s) | 123 |
| Eco31I | GGTCTC | 1 cut(s) | 231 |
| Eco32I | GATATC | 1 cut(s) | 634 |
| Eco47I | GGWCC | 2 cut(s) | 29, 436 |
| Eco57I | CTGAAG | 1 cut(s) | 251 |
| EcoRV | GATATC | 1 cut(s) | 634 |
| EcoT14I | CCWWGG | 2 cut(s) | 196, 718 |
| EcoT38I | GRGCYC | 1 cut(s) | 123 |
| ErhI | CCWWGG | 2 cut(s) | 196, 718 |
| FaeI | CATG | 3 cut(s) | 173, 368, 397 |
| FaiI | YATR | 9 cut(s) | 104, 171, 329, 366, 395, 470, 491, 582, 778 |
| FatI | CATG | 3 cut(s) | 169, 364, 393 |
| FauI | CCCGC | 1 cut(s) | 171 |
| FblI | GTMKAC | 1 cut(s) | 328 |
| Fnu4HI | GCNGC | 1 cut(s) | 578 |
| FokI | GGATG | 3 cut(s) | 28, 107, 758 |
| FriOI | GRGCYC | 1 cut(s) | 123 |
| Fsp4HI | GCNGC | 1 cut(s) | 578 |
| FspBI | CTAG | 3 cut(s) | 161, 242, 609 |
| GlaI | GCGC | 1 cut(s) | 523 |
| GluI | GCNGC | 1 cut(s) | 578 |
| HaeIII | GGCC | 1 cut(s) | 717 |
| HhaI | GCGC | 1 cut(s) | 524 |
| Hin1II | CATG | 3 cut(s) | 173, 368, 397 |
| Hin6I | GCGC | 1 cut(s) | 522 |
| HinP1I | GCGC | 1 cut(s) | 522 |
| HincII | GTYRAC | 1 cut(s) | 529 |
| HindII | GTYRAC | 1 cut(s) | 529 |
| HinfI | GANTC | 4 cut(s) | 478, 485, 656, 674 |
| HphI | GGTGA | 2 cut(s) | 415, 764 |
| Hpy166II | GTNNAC | 2 cut(s) | 329, 529 |
| Hpy188I | TCNGA | 3 cut(s) | 231, 638, 735 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 482 |
| Hpy8I | GTNNAC | 2 cut(s) | 329, 529 |
| HpyAV | CCTTC | 2 cut(s) | 226, 743 |
| HpyCH4III | ACNGT | 1 cut(s) | 499 |
| HpyCH4V | TGCA | 2 cut(s) | 289, 626 |
| HpyF3I | CTNAG | 3 cut(s) | 90, 346, 771 |
| Hsp92II | CATG | 3 cut(s) | 173, 368, 397 |
| HspAI | GCGC | 1 cut(s) | 522 |
| Kzo9I | GATC | 3 cut(s) | 352, 370, 415 |
| LmnI | GCTCC | 2 cut(s) | 126, 198 |
| LpnPI | CCDG | 9 cut(s) | 45, 208, 393, 412, 474, 490, 559, 586, 675 |
| LweI | GCATC | 1 cut(s) | 420 |
| MaeI | CTAG | 3 cut(s) | 161, 242, 609 |
| MaeIII | GTNAC | 2 cut(s) | 34, 752 |
| MalI | GATC | 3 cut(s) | 354, 372, 417 |
| MboI | GATC | 3 cut(s) | 352, 370, 415 |
| MboII | GAAGA | 3 cut(s) | 143, 266, 362 |
| MflI | RGATCY | 1 cut(s) | 352 |
| MhlI | GDGCHC | 1 cut(s) | 123 |
| MluCI | AATT | 4 cut(s) | 58, 292, 465, 697 |
| MlyI | GAGTC | 3 cut(s) | 487, 665, 683 |
| NdeII | GATC | 3 cut(s) | 352, 370, 415 |
| NlaIII | CATG | 3 cut(s) | 173, 368, 397 |
| NlaIV | GGNNCC | 1 cut(s) | 122 |
| NmuCI | GTSAC | 1 cut(s) | 752 |
| NspV | TTCGAA | 1 cut(s) | 550 |
| PfeI | GAWTC | 1 cut(s) | 485 |
| PkrI | GCNGC | 1 cut(s) | 579 |
| PleI | GAGTC | 3 cut(s) | 486, 664, 682 |
| PpsI | GAGTC | 3 cut(s) | 486, 664, 682 |
| PspN4I | GGNNCC | 1 cut(s) | 122 |
| PspPI | GGNCC | 2 cut(s) | 29, 436 |
| PsuI | RGATCY | 1 cut(s) | 352 |
| RsaI | GTAC | 2 cut(s) | 168, 496 |
| RsaNI | GTAC | 2 cut(s) | 167, 495 |
| SatI | GCNGC | 1 cut(s) | 578 |
| Sau3AI | GATC | 3 cut(s) | 352, 370, 415 |
| Sau96I | GGNCC | 2 cut(s) | 29, 436 |
| SchI | GAGTC | 3 cut(s) | 487, 665, 683 |
| SduI | GDGCHC | 1 cut(s) | 123 |
| SetI | ASST | 9 cut(s) | 195, 227, 237, 337, 390, 509, 573, 754, 777 |
| SfaNI | GCATC | 1 cut(s) | 420 |
| SfcI | CTRYAG | 1 cut(s) | 651 |
| SfuI | TTCGAA | 1 cut(s) | 550 |
| SinI | GGWCC | 2 cut(s) | 29, 436 |
| Sse9I | AATT | 4 cut(s) | 58, 292, 465, 697 |
| SsiI | CCGC | 3 cut(s) | 50, 178, 577 |
| SspI | AATATT | 2 cut(s) | 271, 457 |
| SspMI | CTAG | 3 cut(s) | 161, 242, 609 |
| StyI | CCWWGG | 2 cut(s) | 196, 718 |
| TaaI | ACNGT | 1 cut(s) | 499 |
| TaqI | TCGA | 4 cut(s) | 414, 476, 515, 550 |
| TasI | AATT | 4 cut(s) | 58, 292, 465, 697 |
| TatI | WGTACW | 1 cut(s) | 494 |
| TauI | GCSGC | 1 cut(s) | 580 |
| TfiI | GAWTC | 1 cut(s) | 485 |
| TscAI | CASTG | 2 cut(s) | 694, 775 |
| TseFI | GTSAC | 1 cut(s) | 752 |
| Tsp45I | GTSAC | 1 cut(s) | 752 |
| TspDTI | ATGAA | 3 cut(s) | 32, 573, 762 |
| TspRI | CASTG | 2 cut(s) | 694, 775 |
| VpaK11BI | GGWCC | 2 cut(s) | 29, 436 |
| XmiI | GTMKAC | 1 cut(s) | 328 |
| XspI | CTAG | 3 cut(s) | 161, 242, 609 |