Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008778

Physical Location & Seq

Genomic Coordinates Forward (+)

55607081 .. 55612137

Gene Structure 5057 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58912

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGGGAAAGTTCGGGTGAATATCAATGGTCCAGTAACCAATAAAGAGAGTGCGGATTTAAATTGCCATACTGAAGATGAGAACAAGGAGATTAGCGGTGCTGTTACAGGAGTCTTGGGAGAGGGCCAAGGGATCTTAAAGCAAGATGAAGTGCAGGTTACTGACAATCTGCAAGTCGTAAATGATGCACAAACAGAAGCAGTCCAGGTTCAGGTCCTCAGTCAGTCTGGCCAGCAAAGTTCGGAACAACAGCTTCAAGACCCTTCTCTTTTCTGGGAAGGGTTCCTGCCTACCAAGTCTCTCAAGGTTTTGGTAGTGGAAGATGATGATTCAACTCGGCGTGTCATTTGTGCATTACTGCAGAAGTGTGGCTATGAAGTAACAGCTGTAGCTAGTGGATTGCAAGCTTGGAATATTTTAAAAGATCATAGTATTCATGTCGATCTTGTTTTAACTGAGGTTGTCATGCCTGGTCCATCAGGCATTGACCTCCTAAGCAAGATGATGAGCCATGAAACTTGCAAGGATATTCCTGTGATTATGATGTCATCTAATGATTCTTTGAGTATGGTGTTTAAGTGTCTATCAAAGGGTGCGGTTGACTTTTTAGTGAAGCCTATTCGAAAGAACGAGCTTAAAAATCTTTGGCAGCATGCTTGGAGGAAATGCCGGAGCTCCAGTGGTAGTGCAAGTGAAAATGGTGTCCAGACTCAAAAAACTACGTCGACAAGTGATGAAGAGTCAGACAAAAACACTGGCAGTAATCATGAGGATGACAATGAAATCATTGGGGTTAATGCTAGGGATGAAAGTGACAAAGGAAGTGGCACTGAGATTACTCAGGCTATTATTCGTTCAAGTCCTGAAGCATTTGGAAATGACTTGGTTCCTGCAGTTACAACAAGGGAGTGTGAAGGGCAGAATGAAGAGCTTGGTGCTGTTATCACAGGCACAGACTTGGGTATGGGAGTTCCTAAAATTCCAAATCTGCAGCTTGAAGAACCAAAAGAGAAAGACTTGATCAACATAGTTGTCACTAATAAAGACAAACTTTCTAAAATGAAGTCACTGAAAGAGGATGATAAGCTAAAGAAAGGCCAAGTGGAGCTCAACAATGAAAAACCAAATGAGCACTTGGAAAACCAAGCAGTTGATCTGATAGGTGTCACCACTAACAGTACCACTGATCCTCAGATGCAAAGTGGTATGTTTAACACCCCGTGTAGTGTCTCCAAAGTTCCCGGCATAAGAGATAAGGACATCAATGACAGCAAAGAAATTGCTTCCCTTGAGCTCAGTTTAAAGACAGTTAAGACACAGACAGATGCTCGAGATACTGGGTTCCGTGTCCATGACCAAAATGCTTTGAGACATTTGGACCTTTCAGCCCCCTCAAGGTACAAATTTCCTACAACTGCTAATCAGGCTGGAAGTGTGAAACTTGCTAGTCATTCTCCTCTAGATAGTATCTCGGAGGAAGAAAAGGCCAAACTATTGCCTGTTTTTCTGTGTAACTTAACCAGCACTCCCCTTTATCATTCCAATGACTGCAGTAACAACAACCGCATGGACTCCGCTACAAATGATTTCCTTGCAGAACAAAAGGCAGTTGAGGACAAACCAGAGCTGAAATCAACAATCAAACATCTCCAGTCTTCCTCTGCCTTCCAACCACACCATGATAGCCTTTTATCTTTTTCCCACCAGCCTATAATTCAAGGGAAGGCTGATGCTGCATTTGGTAGCACTATATTGGCACAAGGAAGGGGGATGAATCAGCAGGTCCAGGTGGAGCACCATCATCTCCATTACCACCATCACCACCATGTGCACAGCATACCCCAGCACCAGCAGATACCCAATCATGATGAGTCATCTGGAAAAAATATGGCAGCGGAAGATCCATGCTTTGGGCCATCTCATGTGCTGGGTACACCGATAGAAGGGAATGTTGGTAATCACAGTGTGCATGTGAGTGAGTACTCTGGAAGTGACCATAGTAGTGATGAACAGAATATAAGTAGCTCTCCCATAGATTCTAGAGGAGAAAAAGAGGGAACCATCAGCCCAATTGAAGTTGGAAGCAAAAGTGGAGTTGATCAGAATCATGTATCAAAAAGAGAGGCTGCTTTGAATAGGTTCCGCCAGAAGAGGAAAGAGAGATGCTTCGACAAGAAGGTCAGATACCAAAGCAGGAAGAAACTAGCAGATCAAAGACCACGTGTCCGTGGAAAGTTTATTCAACAGGAGGTGCATGAAAACAAAGGCAAGGACACCCATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:2000026 GO:2000028 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

761

Amino Acids

83.84

Weight (kDa)

5.86

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Response_reg	PF00072	103 - 214	1.4e-24	Response regulator receiver domain
CCT	PF06203	707 - 749	5.2e-18	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100
malus_domestica	MD01G1114400.v1.1 MD07G1182300.v1.1 MD07G1182500.v1.1
pyrus_communis	pycom01g14340 pycom07g17500
rosa_chinensis	RchiOBHm_Chr1g0364431
rosa_laevigata	RLG00000027480
rosa_multiflora	Rmu_sc0001342.1_g000006
rosa_roxburghii	Rroxscaffold_4G00291850 Rroxscaffold_4G00292280
rosa_rugosa	Rorug01G0316100
rosa_samantha	Rh1AG324400 Rh1BG287100 Rh1CG303700 Rh1DG318600
rosa_wichuraiana	Rw1G028750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2177
Acc36I	ACCTGC	2 cut(s)	145, 1771
AccB7I	CCANNNNNTGG	1 cut(s)	1910
AccI	GTMKAC	1 cut(s)	725
AciI	CCGC	7 cut(s)	53, 96, 596, 1564, 1575, 1895, 2143
AclWI	GGATC	3 cut(s)	140, 1181, 1895
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	2 cut(s)	978, 1403
AcuI	CTGAAG	2 cut(s)	93, 885
AcvI	CACGTG	1 cut(s)	2222
AdeI	CACNNNGTG	3 cut(s)	1221, 1828, 1966
AfaI	GTAC	4 cut(s)	1180, 1400, 1933, 1982
AfiI	CCNNNNNNNGG	4 cut(s)	211, 1395, 1910, 1943
AflIII	ACRYGT	1 cut(s)	2221
AgsI	TTSAA	8 cut(s)	257, 333, 858, 998, 1718, 2075, 2134, 2243
AhdI	GACNNNNNGTC	1 cut(s)	2222
AjnI	CCWGG	3 cut(s)	204, 469, 1785
AjuI	GAANNNNNNNTTGG	2 cut(s)	1935, 1967
Alw21I	GWGCWC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
Alw26I	GTCTC	3 cut(s)	303, 1234, 1363
Alw44I	GTGCAC	1 cut(s)	1829
AlwI	GGATC	3 cut(s)	140, 1181, 1895
Ama87I	CYCGRG	1 cut(s)	1329
AoxI	GGCC	5 cut(s)	124, 229, 1096, 1485, 1913
ApaLI	GTGCAC	1 cut(s)	1829
ApeKI	GCWGC	5 cut(s)	649, 991, 1733, 1892, 2126
ApoI	RAATTY	2 cut(s)	978, 1403
Asp700I	GAANNNNTTC	1 cut(s)	2138
AspS9I	GGNCC	7 cut(s)	29, 124, 214, 473, 1378, 1783, 1913
AsuC2I	CCSGG	1 cut(s)	1242
AsuHPI	GGTGA	3 cut(s)	28, 1159, 1811
AsuII	TTCGAA	1 cut(s)	622
AvaI	CYCGRG	1 cut(s)	1329
AvaII	GGWCC	5 cut(s)	29, 214, 473, 1378, 1783
BaeGI	GKGCMC	1 cut(s)	1833
BalI	TGGCCA	1 cut(s)	231
BanII	GRGCYC	3 cut(s)	677, 1110, 1296
BarI	GAAGNNNNNNTAC	2 cut(s)	2168, 2200
BbrPI	CACGTG	1 cut(s)	2222
BbsI	GAAGAC	1 cut(s)	1647
Bbv12I	GWGCWC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
BbvI	GCAGC	5 cut(s)	661, 1003, 1720, 1904, 2113
BccI	CCATC	5 cut(s)	484, 1806, 1824, 1924, 2069
BciT130I	CCWGG	3 cut(s)	206, 471, 1787
BclI	TGATCA	2 cut(s)	1020, 2098
BcnI	CCSGG	1 cut(s)	1242
BcoDI	GTCTC	3 cut(s)	303, 1234, 1363
BfaI	CTAG	6 cut(s)	393, 801, 1446, 1460, 2040, 2204
BfmI	CTRYAG	5 cut(s)	359, 387, 891, 989, 1549
BfuAI	ACCTGC	2 cut(s)	145, 1771
BisI	GCNGC	5 cut(s)	650, 992, 1734, 1893, 2127
BlsI	GCNGC	5 cut(s)	651, 993, 1735, 1894, 2128
BmcAI	AGTACT	1 cut(s)	1982
Bme1390I	CCNGG	4 cut(s)	206, 471, 1242, 1787
Bme18I	GGWCC	5 cut(s)	29, 214, 473, 1378, 1783
BmeRI	GACNNNNNGTC	1 cut(s)	2222
BmeT110I	CYCGRG	1 cut(s)	1329
BmgT120I	GGNCC	7 cut(s)	29, 124, 214, 473, 1378, 1783, 1913
BmiI	GGNNCC	5 cut(s)	284, 888, 1343, 2059, 2141
BmrFI	CCNGG	4 cut(s)	206, 471, 1242, 1787
BmrI	ACTGGG	1 cut(s)	1347
BmsI	GCATC	5 cut(s)	175, 1185, 1315, 1720, 2153
BmuI	ACTGGG	1 cut(s)	1347
BpiI	GAAGAC	1 cut(s)	1647
BpmI	CTGGAG	2 cut(s)	661, 1634
Bpu10I	CCTNAGC	1 cut(s)	494
Bpu14I	TTCGAA	1 cut(s)	622
BpuEI	CTTGAG	3 cut(s)	287, 1310, 1378
BpuMI	CCSGG	1 cut(s)	1242
BsaAI	YACGTR	1 cut(s)	2222
BsaBI	GATNNNNATC	1 cut(s)	2103
BsaJI	CCNNGG	2 cut(s)	127, 2227
BsaXI	ACNNNNNCTCC	4 cut(s)	664, 694, 1510, 1540
Bsc4I	CCNNNNNNNGG	4 cut(s)	211, 1395, 1910, 1943
Bse1I	ACTGG	5 cut(s)	32, 678, 760, 1342, 1651
Bse3DI	GCAATG	1 cut(s)	2278
Bse8I	GATNNNNATC	1 cut(s)	2103
BseBI	CCWGG	3 cut(s)	206, 471, 1787
BseDI	CCNNGG	2 cut(s)	127, 2227
BseGI	GGATG	4 cut(s)	778, 811, 1084, 1776
BseJI	GATNNNNATC	1 cut(s)	2103
BseLI	CCNNNNNNNGG	4 cut(s)	211, 1395, 1910, 1943
BseMI	GCAATG	1 cut(s)	2278
BseMII	CTCAG	6 cut(s)	232, 447, 822, 854, 1205, 1309
BseNI	ACTGG	5 cut(s)	32, 678, 760, 1342, 1651
BseRI	GAGGAG	2 cut(s)	1446, 2058
BseSI	GKGCMC	1 cut(s)	1833
BseXI	GCAGC	5 cut(s)	661, 1003, 1720, 1904, 2113
BseYI	CCCAGC	2 cut(s)	1842, 1927
BsgI	GTGCAG	1 cut(s)	173
BshFI	GGCC	5 cut(s)	126, 231, 1098, 1487, 1915
BsiHKAI	GWGCWC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
BsiHKCI	CYCGRG	1 cut(s)	1329
BsiSI	CCGG	2 cut(s)	670, 1242
BslI	CCNNNNNNNGG	4 cut(s)	211, 1395, 1910, 1943
BsmAI	GTCTC	3 cut(s)	303, 1234, 1363
BsnI	GGCC	5 cut(s)	126, 231, 1098, 1487, 1915
BsoBI	CYCGRG	1 cut(s)	1329
Bsp119I	TTCGAA	1 cut(s)	622
Bsp1286I	GDGCHC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
Bsp143I	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
BspACI	CCGC	7 cut(s)	53, 96, 596, 1564, 1575, 1895, 2143
BspANI	GGCC	5 cut(s)	126, 231, 1098, 1487, 1915
BspCNI	CTCAG	6 cut(s)	231, 448, 823, 853, 1204, 1308
BspHI	TCATGA	2 cut(s)	766, 1864
BspLI	GGNNCC	5 cut(s)	284, 888, 1343, 2059, 2141
BspMAI	CTGCAG	4 cut(s)	363, 895, 993, 1553
BspMI	ACCTGC	2 cut(s)	145, 1771
BspPI	GGATC	3 cut(s)	140, 1181, 1895
BspQI	GCTCTTC	1 cut(s)	921
BspT104I	TTCGAA	1 cut(s)	622
BsrDI	GCAATG	1 cut(s)	2278
BsrI	ACTGG	5 cut(s)	32, 678, 760, 1342, 1651
BssECI	CCNNGG	2 cut(s)	127, 2227
BssMI	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
BssT1I	CCWWGG	1 cut(s)	127
Bst2UI	CCWGG	3 cut(s)	206, 471, 1787
Bst4CI	ACNGT	3 cut(s)	1178, 1309, 1964
Bst6I	CTCTTC	3 cut(s)	732, 921, 2144
BstBAI	YACGTR	1 cut(s)	2222
BstBI	TTCGAA	1 cut(s)	622
BstC8I	GCNNGC	3 cut(s)	233, 405, 654
BstDEI	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1191, 1295
BstDSI	CCRYGG	1 cut(s)	2227
BstF5I	GGATG	4 cut(s)	778, 811, 1084, 1776
BstKTI	GATC	9 cut(s)	135, 427, 445, 1023, 1156, 1189, 1903, 2101, 2212
BstMAI	GTCTC	3 cut(s)	303, 1234, 1363
BstMBI	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
BstMWI	GCNNNNNNNGC	2 cut(s)	1424, 1733
BstNI	CCWGG	3 cut(s)	206, 471, 1787
BstNSI	RCATGY	2 cut(s)	656, 1973
BstSCI	CCNGG	4 cut(s)	204, 469, 1240, 1785
BstSFI	CTRYAG	5 cut(s)	359, 387, 891, 989, 1549
BstSLI	GKGCMC	1 cut(s)	1833
BstV1I	GCAGC	5 cut(s)	661, 1003, 1720, 1904, 2113
BstV2I	GAAGAC	1 cut(s)	1647
BstX2I	RGATCY	2 cut(s)	132, 1900
BstYI	RGATCY	2 cut(s)	132, 1900
BsuRI	GGCC	5 cut(s)	126, 231, 1098, 1487, 1915
BtgI	CCRYGG	1 cut(s)	2227
BtsCI	GGATG	4 cut(s)	778, 811, 1084, 1776
BtsIMutI	CAGTG	6 cut(s)	685, 753, 828, 1067, 1182, 1969
BveI	ACCTGC	2 cut(s)	145, 1771
Cac8I	GCNNGC	3 cut(s)	233, 405, 654
CciI	TCATGA	2 cut(s)	766, 1864
Cfr13I	GGNCC	7 cut(s)	29, 124, 214, 473, 1378, 1783, 1913
Csp6I	GTAC	4 cut(s)	1179, 1399, 1932, 1981
CspCI	CAANNNNNGTGG	2 cut(s)	805, 840
CviQI	GTAC	4 cut(s)	1179, 1399, 1932, 1981
DdeI	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1191, 1295
DpnI	GATC	9 cut(s)	134, 426, 444, 1022, 1155, 1188, 1902, 2100, 2211
DpnII	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
DraI	TTTAAA	3 cut(s)	60, 420, 1302
DraIII	CACNNNGTG	3 cut(s)	1221, 1828, 1966
DrdI	GACNNNNNNGTC	1 cut(s)	2177
DriI	GACNNNNNGTC	1 cut(s)	2222
DseDI	GACNNNNNNGTC	1 cut(s)	2177
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	3 cut(s)	732, 921, 2144
Eam1105I	GACNNNNNGTC	1 cut(s)	2222
EarI	CTCTTC	3 cut(s)	732, 921, 2144
EciI	GGCGGA	1 cut(s)	2132
Ecl136II	GAGCTC	3 cut(s)	675, 1108, 1294
Eco130I	CCWWGG	1 cut(s)	127
Eco24I	GRGCYC	3 cut(s)	677, 1110, 1296
Eco47I	GGWCC	5 cut(s)	29, 214, 473, 1378, 1783
Eco53kI	GAGCTC	3 cut(s)	675, 1108, 1294
Eco57I	CTGAAG	2 cut(s)	93, 885
Eco72I	CACGTG	1 cut(s)	2222
Eco88I	CYCGRG	1 cut(s)	1329
EcoICRI	GAGCTC	3 cut(s)	675, 1108, 1294
EcoO109I	RGGNCCY	1 cut(s)	214
EcoRII	CCWGG	3 cut(s)	204, 469, 1785
EcoT14I	CCWWGG	1 cut(s)	127
EcoT38I	GRGCYC	3 cut(s)	677, 1110, 1296
ErhI	CCWWGG	1 cut(s)	127
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FbaI	TGATCA	2 cut(s)	1020, 2098
FblI	GTMKAC	1 cut(s)	725
Fnu4HI	GCNGC	5 cut(s)	650, 992, 1734, 1893, 2127
FokI	GGATG	4 cut(s)	785, 818, 1091, 1783
FriOI	GRGCYC	3 cut(s)	677, 1110, 1296
Fsp4HI	GCNGC	5 cut(s)	650, 992, 1734, 1893, 2127
FspBI	CTAG	6 cut(s)	393, 801, 1446, 1460, 2040, 2204
GluI	GCNGC	5 cut(s)	650, 992, 1734, 1893, 2127
GsaI	CCCAGC	2 cut(s)	1846, 1931
GsuI	CTGGAG	2 cut(s)	661, 1634
HaeIII	GGCC	5 cut(s)	126, 231, 1098, 1487, 1915
HapII	CCGG	2 cut(s)	670, 1242
HincII	GTYRAC	2 cut(s)	601, 726
HindII	GTYRAC	2 cut(s)	601, 726
HindIII	AAGCTT	1 cut(s)	405
HpaII	CCGG	2 cut(s)	670, 1242
HphI	GGTGA	3 cut(s)	28, 1159, 1811
Hpy166II	GTNNAC	4 cut(s)	601, 726, 1831, 1934
Hpy188I	TCNGA	7 cut(s)	244, 745, 1158, 1194, 1474, 2103, 2183
Hpy8I	GTNNAC	4 cut(s)	601, 726, 1831, 1934
Hpy99I	CGWCG	1 cut(s)	727
HpyAV	CCTTC	8 cut(s)	272, 273, 908, 1675, 1717, 1758, 1937, 2170
HpyCH4III	ACNGT	3 cut(s)	1178, 1309, 1964
HpyCH4IV	ACGT	2 cut(s)	722, 2221
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1424, 1733
HpyF3I	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1191, 1295
HpySE526I	ACGT	2 cut(s)	722, 2221
Ksp22I	TGATCA	2 cut(s)	1020, 2098
Kzo9I	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	4 cut(s)	672, 680, 1105, 1792
Lsp1109I	GCAGC	5 cut(s)	661, 1003, 1720, 1904, 2113
LweI	GCATC	5 cut(s)	175, 1185, 1315, 1720, 2153
MaeI	CTAG	6 cut(s)	393, 801, 1446, 1460, 2040, 2204
MaeII	ACGT	2 cut(s)	722, 2221
MalI	GATC	9 cut(s)	134, 426, 444, 1022, 1155, 1188, 1902, 2100, 2211
MboI	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
MfeI	CAATTG	1 cut(s)	2070
MflI	RGATCY	2 cut(s)	132, 1900
MhlI	GDGCHC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
MlsI	TGGCCA	1 cut(s)	231
MluCI	AATT	6 cut(s)	61, 978, 1278, 1403, 1713, 2070
MluNI	TGGCCA	1 cut(s)	231
MlyI	GAGTC	5 cut(s)	120, 703, 749, 1565, 1880
MmeI	TCCRAC	2 cut(s)	1693, 2059
Mox20I	TGGCCA	1 cut(s)	231
MroXI	GAANNNNTTC	1 cut(s)	2138
MscI	TGGCCA	1 cut(s)	231
MslI	CAYNNNNRTG	5 cut(s)	771, 1542, 1824, 1974, 2001
Msp20I	TGGCCA	1 cut(s)	231
MspA1I	CMGCKG	2 cut(s)	386, 1895
MspI	CCGG	2 cut(s)	670, 1242
MspR9I	CCNGG	4 cut(s)	206, 471, 1242, 1787
MunI	CAATTG	1 cut(s)	2070
MvaI	CCWGG	3 cut(s)	206, 471, 1787
MwoI	GCNNNNNNNGC	2 cut(s)	1424, 1733
NciI	CCSGG	1 cut(s)	1242
NdeII	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
NlaIV	GGNNCC	5 cut(s)	284, 888, 1343, 2059, 2141
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	5 cut(s)	812, 1033, 1065, 1165, 1991
NspI	RCATGY	2 cut(s)	656, 1973
NspV	TTCGAA	1 cut(s)	622
PaeI	GCATGC	1 cut(s)	656
PaeR7I	CTCGAG	1 cut(s)	1329
PagI	TCATGA	2 cut(s)	766, 1864
PciSI	GCTCTTC	1 cut(s)	921
PdmI	GAANNNNTTC	1 cut(s)	2138
PfeI	GAWTC	5 cut(s)	329, 557, 1774, 2036, 2104
PflMI	CCANNNNNTGG	1 cut(s)	1910
PkrI	GCNGC	5 cut(s)	651, 993, 1735, 1894, 2128
PleI	GAGTC	5 cut(s)	119, 703, 748, 1565, 1879
PmaCI	CACGTG	1 cut(s)	2222
PmlI	CACGTG	1 cut(s)	2222
PpsI	GAGTC	5 cut(s)	119, 703, 748, 1565, 1879
Ppu21I	YACGTR	1 cut(s)	2222
PpuMI	RGGWCCY	1 cut(s)	214
Psp124BI	GAGCTC	3 cut(s)	677, 1110, 1296
Psp5II	RGGWCCY	1 cut(s)	214
Psp6I	CCWGG	3 cut(s)	204, 469, 1785
PspCI	CACGTG	1 cut(s)	2222
PspFI	CCCAGC	2 cut(s)	1842, 1927
PspGI	CCWGG	3 cut(s)	204, 469, 1785
PspN4I	GGNNCC	5 cut(s)	284, 888, 1343, 2059, 2141
PspPI	GGNCC	7 cut(s)	29, 124, 214, 473, 1378, 1783, 1913
PspPPI	RGGWCCY	1 cut(s)	214
PstI	CTGCAG	4 cut(s)	363, 895, 993, 1553
PsuI	RGATCY	2 cut(s)	132, 1900
PvuII	CAGCTG	1 cut(s)	386
RsaI	GTAC	4 cut(s)	1180, 1400, 1933, 1982
RsaNI	GTAC	4 cut(s)	1179, 1399, 1932, 1981
RseI	CAYNNNNRTG	5 cut(s)	771, 1542, 1824, 1974, 2001
SacI	GAGCTC	3 cut(s)	677, 1110, 1296
SalI	GTCGAC	1 cut(s)	724
SapI	GCTCTTC	1 cut(s)	921
SatI	GCNGC	5 cut(s)	650, 992, 1734, 1893, 2127
Sau3AI	GATC	9 cut(s)	132, 424, 442, 1020, 1153, 1186, 1900, 2098, 2209
Sau96I	GGNCC	7 cut(s)	29, 124, 214, 473, 1378, 1783, 1913
ScaI	AGTACT	1 cut(s)	1982
SchI	GAGTC	5 cut(s)	120, 703, 749, 1565, 1880
ScrFI	CCNGG	4 cut(s)	206, 471, 1242, 1787
SduI	GDGCHC	6 cut(s)	677, 1110, 1134, 1296, 1797, 1833
SfaNI	GCATC	5 cut(s)	175, 1185, 1315, 1720, 2153
SfcI	CTRYAG	5 cut(s)	359, 387, 891, 989, 1549
Sfr274I	CTCGAG	1 cut(s)	1329
SfuI	TTCGAA	1 cut(s)	622
SinI	GGWCC	5 cut(s)	29, 214, 473, 1378, 1783
SlaI	CTCGAG	1 cut(s)	1329
SmiI	ATTTAAAT	1 cut(s)	60
SmiMI	CAYNNNNRTG	5 cut(s)	771, 1542, 1824, 1974, 2001
SmlI	CTYRAG	4 cut(s)	302, 1289, 1329, 1393
SmoI	CTYRAG	4 cut(s)	302, 1289, 1329, 1393
SphI	GCATGC	1 cut(s)	656
Sse9I	AATT	6 cut(s)	61, 978, 1278, 1403, 1713, 2070
SsiI	CCGC	7 cut(s)	53, 96, 596, 1564, 1575, 1895, 2143
SspI	AATATT	1 cut(s)	415
SspMI	CTAG	6 cut(s)	393, 801, 1446, 1460, 2040, 2204
SstI	GAGCTC	3 cut(s)	677, 1110, 1296
StyD4I	CCNGG	4 cut(s)	204, 469, 1240, 1785
StyI	CCWWGG	1 cut(s)	127
SwaI	ATTTAAAT	1 cut(s)	60
TaaI	ACNGT	3 cut(s)	1178, 1309, 1964
TaiI	ACGT	2 cut(s)	725, 2224
TaqI	TCGA	5 cut(s)	441, 622, 725, 1330, 2169
TasI	AATT	6 cut(s)	61, 978, 1278, 1403, 1713, 2070
TatI	WGTACW	1 cut(s)	1980
TfiI	GAWTC	5 cut(s)	329, 557, 1774, 2036, 2104
TscAI	CASTG	6 cut(s)	685, 760, 835, 1074, 1189, 1969
TseFI	GTSAC	5 cut(s)	812, 1033, 1065, 1165, 1991
TseI	GCWGC	5 cut(s)	649, 991, 1733, 1892, 2126
Tsp45I	GTSAC	5 cut(s)	812, 1033, 1065, 1165, 1991
TspGWI	ACGGA	2 cut(s)	1334, 2216
TspRI	CASTG	6 cut(s)	685, 760, 835, 1074, 1189, 1969
Van91I	CCANNNNNTGG	1 cut(s)	1910
VneI	GTGCAC	1 cut(s)	1829
VpaK11BI	GGWCC	5 cut(s)	29, 214, 473, 1378, 1783
XapI	RAATTY	2 cut(s)	978, 1403
XbaI	TCTAGA	2 cut(s)	1459, 2039
XceI	RCATGY	2 cut(s)	656, 1973
XhoI	CTCGAG	1 cut(s)	1329
XmiI	GTMKAC	1 cut(s)	725
XmnI	GAANNNNTTC	1 cut(s)	2138
XspI	CTAG	6 cut(s)	393, 801, 1446, 1460, 2040, 2204
ZrmI	AGTACT	1 cut(s)	1982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.