Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001342.1

Orthogroup ID

OG0008778

Physical Location & Seq

Genomic Coordinates Forward (+)

22281 .. 26439

Gene Structure 4159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001342.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

atggggaaagttcgggtgaatatcaatggtccagtaaccaataaagagagtgtggatttaaattgccatactgaagatgagaacaaggagattagcggtgctgttacaggagtcttgggagagggccaagggatcttaaaggaagatgaagtgcaggttactgacaatctgcaagtcgtaaatgatgcacaaacagaagcagtccaggttcaggtcctgagtcagtctggccagcaaagttcggaacaacagcttcaagacccttctcttttctgggaagggttcctgcctaccaagtctctcaaggttttggtagtggaagatgatgattcaactcggcgtgtcatttgtgcattactgcagaagtgtggctatgaagtaacagctgtagctagtggattgcaagcttggaatattttaaaagatcatagtattcatgtcgatcttgttttaactgaggttgtcatgcctggtccatcaggcattgacctcctaagcaagatgatgagccatgaaacttgcaaggatattcctgtgattatgatgtcatctaatgattctttgagtatggtgtttaagtgtctatcaaagggtgcggttgactttttagtgaaacctattcgaaagaacgagcttaaaaatctttggcagcatgcttggaggaaatgccggagctccagtggtagtgcaagtgaaaatggtgtccagactccaaaaactacgtcgacaagtgatgaagagtcagacaaaaacactggcagtaatcatgaggatgacaatgaaatcattggggttaatgctagggatgaaagtgacaaaggaagtggcactgagattactcaggctattattcgttcaagtcctgaagcatttggaaatgacttggttcctgcagttacaacaagggagtgtgaagggcagaatgaagagcttggcgcagacttgggtatgggagttcctaaaattccaaatctgcagcttgaagaaccaaaagagaaagacttggtcaacatagttgtcactaataaagacaaacttaaaatgaagtcactgaaagaggatgataagctaaagaaaggccaagtggagctcaacaatgaaaaaccaaatgagcacttggaaaaccaagcagttgatctgatatgtgtcaccactaacagtaccactgatcctcagatgcaaagtggtatgtttaacaccccgtgtagtgtctccaaagttcccggcataagagataaggacatcaatgacagcaaagaaatttcttcccttgagctcagtttaaagacacagacagatgctcgagatactgggttcagtgtccatgaccaaaatgctttgagacatttggacctttcagccccctcaaggtacaaatttcctacaactgctaatcaggctggaagtgtgaaacttgctagtcattctcctctagatagtatctcggaggaagaaaaggccaaactattgcctgtttttctgtgtaacttaaccagcactcccctttatcattccaatgactgcagtaacaacaactgcatggactccactacaaatgatttccttgcagaacaaaaggcagttgaggacaaaccagagctgaaatcaacaatcaaacatctccagtcttcctctgccttccaaccacaccatgatagccttttatctttttcccaccagcctataattcaagggaaggctgatgctgcatttggtagcactatattggcacaaggaaggggcatgaatcagcaggtccaggtggagcaccatcatctgcattaccaccatcaccaccatgtgcacagcataccccagcaccagcagatacccaatcatgatgagtcgtctggaaaaaatatggcagcggaagatccatgctttgggccatctcatgtgctgggtacaccgatagaagggaatgttggtaatcacagtgtgcatgcgagtaagtactctggaagtgaccatagtagtgatgaacagaatataagtagctctcccatagattctagaggagaaaaagagggaaccatcagcccaattgaagttggaagcaaaagtggagttgatcagaatcatgtatcaaaaagagaggctgctttgaataggttccgccagaagaggaaagagagatgcttcgacaagaaggtcagataccaaagcaggaagaaactagcagatcaaagaccacgtgtccgtggaaagtttgttcaacaggaggtgcatgaaaacaaaggcaaggacacccattgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:2000026 GO:2000028 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

CCT Response_reg

Protein Analysis

752

Amino Acids

82.86

Weight (kDa)

5.79

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100 AT5G60100
malus_domestica	MD01G1114400.v1.1 MD07G1182300.v1.1 MD07G1182500.v1.1
pyrus_communis	pycom01g14340 pycom07g17500
rosa_chinensis	RchiOBHm_Chr1g0364431
rosa_laevigata	RLG00000027480
rosa_multiflora	Rmu_sc0001342.1_g000006
rosa_roxburghii	Rroxscaffold_4G00291850 Rroxscaffold_4G00292280
rosa_rugosa	Rorug01G0316100
rosa_samantha	Rh1AG324400 Rh1BG287100 Rh1CG303700 Rh1DG318600
rosa_wichuraiana	Rw1G028750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2150
Acc36I	ACCTGC	2 cut(s)	145, 1744
AccB7I	CCANNNNNTGG	1 cut(s)	1883
AccI	GTMKAC	1 cut(s)	725
AciI	CCGC	4 cut(s)	96, 596, 1868, 2116
AclWI	GGATC	3 cut(s)	140, 1163, 1868
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	3 cut(s)	963, 1260, 1376
AcuI	CTGAAG	2 cut(s)	93, 885
AcvI	CACGTG	1 cut(s)	2195
AdeI	CACNNNGTG	3 cut(s)	1203, 1801, 1939
AfaI	GTAC	4 cut(s)	1162, 1373, 1906, 1955
AfiI	CCNNNNNNNGG	4 cut(s)	211, 1368, 1883, 1916
AflIII	ACRYGT	1 cut(s)	2194
AgsI	TTSAA	8 cut(s)	257, 333, 858, 983, 1691, 2048, 2107, 2216
AhdI	GACNNNNNGTC	1 cut(s)	2195
AjnI	CCWGG	3 cut(s)	204, 469, 1758
AjuI	GAANNNNNNNTTGG	2 cut(s)	1908, 1940
AloI	GAACNNNNNNTCC	2 cut(s)	2196, 2228
Alw21I	GWGCWC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
Alw26I	GTCTC	3 cut(s)	303, 1216, 1336
Alw44I	GTGCAC	1 cut(s)	1802
AlwI	GGATC	3 cut(s)	140, 1163, 1868
AlwNI	CAGNNNCTG	1 cut(s)	217
Ama87I	CYCGRG	1 cut(s)	1302
AoxI	GGCC	5 cut(s)	124, 229, 1078, 1458, 1886
ApaLI	GTGCAC	1 cut(s)	1802
ApeKI	GCWGC	5 cut(s)	649, 976, 1706, 1865, 2099
ApoI	RAATTY	3 cut(s)	963, 1260, 1376
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
Asp700I	GAANNNNTTC	1 cut(s)	2111
AspLEI	GCGC	1 cut(s)	938
AspS9I	GGNCC	7 cut(s)	29, 124, 214, 473, 1351, 1756, 1886
AsuC2I	CCSGG	1 cut(s)	1224
AsuHPI	GGTGA	3 cut(s)	28, 1141, 1784
AsuII	TTCGAA	1 cut(s)	622
AvaI	CYCGRG	1 cut(s)	1302
AvaII	GGWCC	5 cut(s)	29, 214, 473, 1351, 1756
BaeGI	GKGCMC	1 cut(s)	1806
BalI	TGGCCA	1 cut(s)	231
BanII	GRGCYC	3 cut(s)	677, 1092, 1278
BarI	GAAGNNNNNNTAC	2 cut(s)	2141, 2173
BbrPI	CACGTG	1 cut(s)	2195
BbsI	GAAGAC	1 cut(s)	1620
Bbv12I	GWGCWC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
BbvI	GCAGC	5 cut(s)	661, 988, 1693, 1877, 2086
BccI	CCATC	5 cut(s)	484, 1779, 1797, 1897, 2042
BciT130I	CCWGG	3 cut(s)	206, 471, 1760
BclI	TGATCA	1 cut(s)	2071
BcnI	CCSGG	1 cut(s)	1224
BcoDI	GTCTC	3 cut(s)	303, 1216, 1336
BfaI	CTAG	6 cut(s)	393, 801, 1419, 1433, 2013, 2177
BfmI	CTRYAG	5 cut(s)	359, 387, 891, 974, 1522
BfuAI	ACCTGC	2 cut(s)	145, 1744
BisI	GCNGC	5 cut(s)	650, 977, 1707, 1866, 2100
BlsI	GCNGC	5 cut(s)	651, 978, 1708, 1867, 2101
BmcAI	AGTACT	1 cut(s)	1955
Bme1390I	CCNGG	4 cut(s)	206, 471, 1224, 1760
Bme18I	GGWCC	5 cut(s)	29, 214, 473, 1351, 1756
BmeRI	GACNNNNNGTC	1 cut(s)	2195
BmeT110I	CYCGRG	1 cut(s)	1302
BmgT120I	GGNCC	7 cut(s)	29, 124, 214, 473, 1351, 1756, 1886
BmiI	GGNNCC	4 cut(s)	284, 888, 2032, 2114
BmrFI	CCNGG	4 cut(s)	206, 471, 1224, 1760
BmrI	ACTGGG	1 cut(s)	1320
BmsI	GCATC	5 cut(s)	175, 1167, 1288, 1693, 2126
BmuI	ACTGGG	1 cut(s)	1320
BpiI	GAAGAC	1 cut(s)	1620
BpmI	CTGGAG	2 cut(s)	661, 1607
Bpu10I	CCTNAGC	1 cut(s)	494
Bpu14I	TTCGAA	1 cut(s)	622
BpuEI	CTTGAG	3 cut(s)	287, 1292, 1351
BpuMI	CCSGG	1 cut(s)	1224
BsaAI	YACGTR	1 cut(s)	2195
BsaBI	GATNNNNATC	1 cut(s)	2076
BsaJI	CCNNGG	2 cut(s)	127, 2200
BsaXI	ACNNNNNCTCC	4 cut(s)	664, 694, 1483, 1513
Bsc4I	CCNNNNNNNGG	4 cut(s)	211, 1368, 1883, 1916
Bse1I	ACTGG	5 cut(s)	32, 678, 760, 1315, 1624
Bse3DI	GCAATG	1 cut(s)	2251
Bse8I	GATNNNNATC	1 cut(s)	2076
BseBI	CCWGG	3 cut(s)	206, 471, 1760
BseDI	CCNNGG	2 cut(s)	127, 2200
BseGI	GGATG	3 cut(s)	778, 811, 1066
BseJI	GATNNNNATC	1 cut(s)	2076
BseLI	CCNNNNNNNGG	4 cut(s)	211, 1368, 1883, 1916
BseMI	GCAATG	1 cut(s)	2251
BseMII	CTCAG	6 cut(s)	209, 447, 822, 854, 1187, 1291
BseNI	ACTGG	5 cut(s)	32, 678, 760, 1315, 1624
BseRI	GAGGAG	2 cut(s)	1419, 2031
BseSI	GKGCMC	1 cut(s)	1806
BseXI	GCAGC	5 cut(s)	661, 988, 1693, 1877, 2086
BseYI	CCCAGC	2 cut(s)	1815, 1900
BsgI	GTGCAG	1 cut(s)	173
BshFI	GGCC	5 cut(s)	126, 231, 1080, 1460, 1888
BsiHKAI	GWGCWC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
BsiHKCI	CYCGRG	1 cut(s)	1302
BsiSI	CCGG	2 cut(s)	670, 1224
BslI	CCNNNNNNNGG	4 cut(s)	211, 1368, 1883, 1916
BsmAI	GTCTC	3 cut(s)	303, 1216, 1336
BsnI	GGCC	5 cut(s)	126, 231, 1080, 1460, 1888
BsoBI	CYCGRG	1 cut(s)	1302
Bsp119I	TTCGAA	1 cut(s)	622
Bsp1286I	GDGCHC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
Bsp143I	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
BspACI	CCGC	4 cut(s)	96, 596, 1868, 2116
BspANI	GGCC	5 cut(s)	126, 231, 1080, 1460, 1888
BspCNI	CTCAG	6 cut(s)	210, 448, 823, 853, 1186, 1290
BspHI	TCATGA	2 cut(s)	766, 1837
BspLI	GGNNCC	4 cut(s)	284, 888, 2032, 2114
BspMAI	CTGCAG	4 cut(s)	363, 895, 978, 1526
BspMI	ACCTGC	2 cut(s)	145, 1744
BspPI	GGATC	3 cut(s)	140, 1163, 1868
BspQI	GCTCTTC	1 cut(s)	921
BspT104I	TTCGAA	1 cut(s)	622
BsrDI	GCAATG	1 cut(s)	2251
BsrI	ACTGG	5 cut(s)	32, 678, 760, 1315, 1624
BssECI	CCNNGG	2 cut(s)	127, 2200
BssMI	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
BssT1I	CCWWGG	1 cut(s)	127
Bst2UI	CCWGG	3 cut(s)	206, 471, 1760
Bst4CI	ACNGT	2 cut(s)	1160, 1937
Bst6I	CTCTTC	3 cut(s)	732, 921, 2117
BstBAI	YACGTR	1 cut(s)	2195
BstBI	TTCGAA	1 cut(s)	622
BstC8I	GCNNGC	4 cut(s)	233, 405, 654, 1944
BstDEI	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1173, 1277
BstDSI	CCRYGG	1 cut(s)	2200
BstF5I	GGATG	3 cut(s)	778, 811, 1066
BstHHI	GCGC	1 cut(s)	938
BstKTI	GATC	8 cut(s)	135, 427, 445, 1138, 1171, 1876, 2074, 2185
BstMAI	GTCTC	3 cut(s)	303, 1216, 1336
BstMBI	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
BstMWI	GCNNNNNNNGC	2 cut(s)	1397, 1706
BstNI	CCWGG	3 cut(s)	206, 471, 1760
BstNSI	RCATGY	2 cut(s)	656, 1946
BstSCI	CCNGG	4 cut(s)	204, 469, 1222, 1758
BstSFI	CTRYAG	5 cut(s)	359, 387, 891, 974, 1522
BstSLI	GKGCMC	1 cut(s)	1806
BstV1I	GCAGC	5 cut(s)	661, 988, 1693, 1877, 2086
BstV2I	GAAGAC	1 cut(s)	1620
BstX2I	RGATCY	2 cut(s)	132, 1873
BstYI	RGATCY	2 cut(s)	132, 1873
BsuRI	GGCC	5 cut(s)	126, 231, 1080, 1460, 1888
BtgI	CCRYGG	1 cut(s)	2200
BtsCI	GGATG	3 cut(s)	778, 811, 1066
BtsIMutI	CAGTG	7 cut(s)	685, 753, 828, 1049, 1164, 1324, 1942
BveI	ACCTGC	2 cut(s)	145, 1744
Cac8I	GCNNGC	4 cut(s)	233, 405, 654, 1944
CaiI	CAGNNNCTG	1 cut(s)	217
CciI	TCATGA	2 cut(s)	766, 1837
CfoI	GCGC	1 cut(s)	938
Cfr13I	GGNCC	7 cut(s)	29, 124, 214, 473, 1351, 1756, 1886
Csp6I	GTAC	4 cut(s)	1161, 1372, 1905, 1954
CspCI	CAANNNNNGTGG	2 cut(s)	805, 840
CviQI	GTAC	4 cut(s)	1161, 1372, 1905, 1954
DdeI	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1173, 1277
DpnI	GATC	8 cut(s)	134, 426, 444, 1137, 1170, 1875, 2073, 2184
DpnII	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
DraI	TTTAAA	3 cut(s)	60, 420, 1284
DraIII	CACNNNGTG	3 cut(s)	1203, 1801, 1939
DrdI	GACNNNNNNGTC	1 cut(s)	2150
DriI	GACNNNNNGTC	1 cut(s)	2195
DseDI	GACNNNNNNGTC	1 cut(s)	2150
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	3 cut(s)	732, 921, 2117
Eam1105I	GACNNNNNGTC	1 cut(s)	2195
EarI	CTCTTC	3 cut(s)	732, 921, 2117
EciI	GGCGGA	1 cut(s)	2105
Ecl136II	GAGCTC	3 cut(s)	675, 1090, 1276
Eco130I	CCWWGG	1 cut(s)	127
Eco24I	GRGCYC	3 cut(s)	677, 1092, 1278
Eco47I	GGWCC	5 cut(s)	29, 214, 473, 1351, 1756
Eco53kI	GAGCTC	3 cut(s)	675, 1090, 1276
Eco57I	CTGAAG	2 cut(s)	93, 885
Eco72I	CACGTG	1 cut(s)	2195
Eco88I	CYCGRG	1 cut(s)	1302
EcoICRI	GAGCTC	3 cut(s)	675, 1090, 1276
EcoO109I	RGGNCCY	1 cut(s)	214
EcoRII	CCWGG	3 cut(s)	204, 469, 1758
EcoT14I	CCWWGG	1 cut(s)	127
EcoT38I	GRGCYC	3 cut(s)	677, 1092, 1278
ErhI	CCWWGG	1 cut(s)	127
FalI	AAGNNNNNCTT	2 cut(s)	1020, 1052
FbaI	TGATCA	1 cut(s)	2071
FblI	GTMKAC	1 cut(s)	725
Fnu4HI	GCNGC	5 cut(s)	650, 977, 1707, 1866, 2100
FokI	GGATG	3 cut(s)	785, 818, 1073
FriOI	GRGCYC	3 cut(s)	677, 1092, 1278
Fsp4HI	GCNGC	5 cut(s)	650, 977, 1707, 1866, 2100
FspBI	CTAG	6 cut(s)	393, 801, 1419, 1433, 2013, 2177
GlaI	GCGC	1 cut(s)	937
GluI	GCNGC	5 cut(s)	650, 977, 1707, 1866, 2100
GsaI	CCCAGC	2 cut(s)	1819, 1904
GsuI	CTGGAG	2 cut(s)	661, 1607
HaeIII	GGCC	5 cut(s)	126, 231, 1080, 1460, 1888
HapII	CCGG	2 cut(s)	670, 1224
HhaI	GCGC	1 cut(s)	938
Hin6I	GCGC	1 cut(s)	936
HinP1I	GCGC	1 cut(s)	936
HincII	GTYRAC	3 cut(s)	601, 726, 1009
HindII	GTYRAC	3 cut(s)	601, 726, 1009
HindIII	AAGCTT	1 cut(s)	405
HpaII	CCGG	2 cut(s)	670, 1224
HphI	GGTGA	3 cut(s)	28, 1141, 1784
Hpy166II	GTNNAC	5 cut(s)	601, 726, 1009, 1804, 1907
Hpy188I	TCNGA	7 cut(s)	244, 745, 1140, 1176, 1447, 2076, 2156
Hpy8I	GTNNAC	5 cut(s)	601, 726, 1009, 1804, 1907
Hpy99I	CGWCG	1 cut(s)	727
HpyAV	CCTTC	8 cut(s)	272, 273, 908, 1648, 1690, 1731, 1910, 2143
HpyCH4III	ACNGT	2 cut(s)	1160, 1937
HpyCH4IV	ACGT	2 cut(s)	722, 2194
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1397, 1706
HpyF3I	CTNAG	7 cut(s)	218, 456, 494, 831, 840, 1173, 1277
HpySE526I	ACGT	2 cut(s)	722, 2194
HspAI	GCGC	1 cut(s)	936
Ksp22I	TGATCA	1 cut(s)	2071
Kzo9I	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	4 cut(s)	672, 680, 1087, 1765
Lsp1109I	GCAGC	5 cut(s)	661, 988, 1693, 1877, 2086
LweI	GCATC	5 cut(s)	175, 1167, 1288, 1693, 2126
MaeI	CTAG	6 cut(s)	393, 801, 1419, 1433, 2013, 2177
MaeII	ACGT	2 cut(s)	722, 2194
MalI	GATC	8 cut(s)	134, 426, 444, 1137, 1170, 1875, 2073, 2184
MboI	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
MfeI	CAATTG	1 cut(s)	2043
MflI	RGATCY	2 cut(s)	132, 1873
MhlI	GDGCHC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
MlsI	TGGCCA	1 cut(s)	231
MluCI	AATT	6 cut(s)	61, 963, 1260, 1376, 1686, 2043
MluNI	TGGCCA	1 cut(s)	231
MlyI	GAGTC	6 cut(s)	120, 229, 703, 749, 1538, 1853
MmeI	TCCRAC	2 cut(s)	1666, 2032
Mox20I	TGGCCA	1 cut(s)	231
MroXI	GAANNNNTTC	1 cut(s)	2111
MscI	TGGCCA	1 cut(s)	231
MslI	CAYNNNNRTG	4 cut(s)	771, 1515, 1797, 1974
Msp20I	TGGCCA	1 cut(s)	231
MspA1I	CMGCKG	2 cut(s)	386, 1868
MspI	CCGG	2 cut(s)	670, 1224
MspR9I	CCNGG	4 cut(s)	206, 471, 1224, 1760
MunI	CAATTG	1 cut(s)	2043
MvaI	CCWGG	3 cut(s)	206, 471, 1760
MwoI	GCNNNNNNNGC	2 cut(s)	1397, 1706
NciI	CCSGG	1 cut(s)	1224
NdeII	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
NlaIV	GGNNCC	4 cut(s)	284, 888, 2032, 2114
NmeAIII	GCCGAG	1 cut(s)	316
NmuCI	GTSAC	5 cut(s)	812, 1018, 1047, 1147, 1964
NspI	RCATGY	2 cut(s)	656, 1946
NspV	TTCGAA	1 cut(s)	622
PaeI	GCATGC	2 cut(s)	656, 1946
PaeR7I	CTCGAG	1 cut(s)	1302
PagI	TCATGA	2 cut(s)	766, 1837
PciSI	GCTCTTC	1 cut(s)	921
PdmI	GAANNNNTTC	1 cut(s)	2111
PfeI	GAWTC	5 cut(s)	329, 557, 1747, 2009, 2077
PflFI	GACNNNGTC	1 cut(s)	1004
PflMI	CCANNNNNTGG	1 cut(s)	1883
PkrI	GCNGC	5 cut(s)	651, 978, 1708, 1867, 2101
PleI	GAGTC	6 cut(s)	119, 228, 703, 748, 1538, 1852
PmaCI	CACGTG	1 cut(s)	2195
PmlI	CACGTG	1 cut(s)	2195
PpsI	GAGTC	6 cut(s)	119, 228, 703, 748, 1538, 1852
Ppu21I	YACGTR	1 cut(s)	2195
PpuMI	RGGWCCY	1 cut(s)	214
Psp124BI	GAGCTC	3 cut(s)	677, 1092, 1278
Psp5II	RGGWCCY	1 cut(s)	214
Psp6I	CCWGG	3 cut(s)	204, 469, 1758
PspCI	CACGTG	1 cut(s)	2195
PspFI	CCCAGC	2 cut(s)	1815, 1900
PspGI	CCWGG	3 cut(s)	204, 469, 1758
PspN4I	GGNNCC	4 cut(s)	284, 888, 2032, 2114
PspPI	GGNCC	7 cut(s)	29, 124, 214, 473, 1351, 1756, 1886
PspPPI	RGGWCCY	1 cut(s)	214
PstI	CTGCAG	4 cut(s)	363, 895, 978, 1526
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	2 cut(s)	132, 1873
PsyI	GACNNNGTC	1 cut(s)	1004
PvuII	CAGCTG	1 cut(s)	386
RsaI	GTAC	4 cut(s)	1162, 1373, 1906, 1955
RsaNI	GTAC	4 cut(s)	1161, 1372, 1905, 1954
RseI	CAYNNNNRTG	4 cut(s)	771, 1515, 1797, 1974
SacI	GAGCTC	3 cut(s)	677, 1092, 1278
SalI	GTCGAC	1 cut(s)	724
SapI	GCTCTTC	1 cut(s)	921
SatI	GCNGC	5 cut(s)	650, 977, 1707, 1866, 2100
Sau3AI	GATC	8 cut(s)	132, 424, 442, 1135, 1168, 1873, 2071, 2182
Sau96I	GGNCC	7 cut(s)	29, 124, 214, 473, 1351, 1756, 1886
ScaI	AGTACT	1 cut(s)	1955
SchI	GAGTC	6 cut(s)	120, 229, 703, 749, 1538, 1853
ScrFI	CCNGG	4 cut(s)	206, 471, 1224, 1760
SduI	GDGCHC	6 cut(s)	677, 1092, 1116, 1278, 1770, 1806
SfaNI	GCATC	5 cut(s)	175, 1167, 1288, 1693, 2126
SfcI	CTRYAG	5 cut(s)	359, 387, 891, 974, 1522
Sfr274I	CTCGAG	1 cut(s)	1302
SfuI	TTCGAA	1 cut(s)	622
SinI	GGWCC	5 cut(s)	29, 214, 473, 1351, 1756
SlaI	CTCGAG	1 cut(s)	1302
SmiI	ATTTAAAT	1 cut(s)	60
SmiMI	CAYNNNNRTG	4 cut(s)	771, 1515, 1797, 1974
SmlI	CTYRAG	4 cut(s)	302, 1271, 1302, 1366
SmoI	CTYRAG	4 cut(s)	302, 1271, 1302, 1366
SphI	GCATGC	2 cut(s)	656, 1946
Sse9I	AATT	6 cut(s)	61, 963, 1260, 1376, 1686, 2043
SsiI	CCGC	4 cut(s)	96, 596, 1868, 2116
SspI	AATATT	1 cut(s)	415
SspMI	CTAG	6 cut(s)	393, 801, 1419, 1433, 2013, 2177
SstI	GAGCTC	3 cut(s)	677, 1092, 1278
StyD4I	CCNGG	4 cut(s)	204, 469, 1222, 1758
StyI	CCWWGG	1 cut(s)	127
SwaI	ATTTAAAT	1 cut(s)	60
TaaI	ACNGT	2 cut(s)	1160, 1937
TaiI	ACGT	2 cut(s)	725, 2197
TaqI	TCGA	5 cut(s)	441, 622, 725, 1303, 2142
TasI	AATT	6 cut(s)	61, 963, 1260, 1376, 1686, 2043
TatI	WGTACW	1 cut(s)	1953
TfiI	GAWTC	5 cut(s)	329, 557, 1747, 2009, 2077
TscAI	CASTG	7 cut(s)	685, 760, 835, 1056, 1171, 1324, 1942
TseFI	GTSAC	5 cut(s)	812, 1018, 1047, 1147, 1964
TseI	GCWGC	5 cut(s)	649, 976, 1706, 1865, 2099
Tsp45I	GTSAC	5 cut(s)	812, 1018, 1047, 1147, 1964
TspGWI	ACGGA	1 cut(s)	2189
TspRI	CASTG	7 cut(s)	685, 760, 835, 1056, 1171, 1324, 1942
Tth111I	GACNNNGTC	1 cut(s)	1004
Van91I	CCANNNNNTGG	1 cut(s)	1883
VneI	GTGCAC	1 cut(s)	1802
VpaK11BI	GGWCC	5 cut(s)	29, 214, 473, 1351, 1756
XapI	RAATTY	3 cut(s)	963, 1260, 1376
XbaI	TCTAGA	2 cut(s)	1432, 2012
XceI	RCATGY	2 cut(s)	656, 1946
XhoI	CTCGAG	1 cut(s)	1302
XmiI	GTMKAC	1 cut(s)	725
XmnI	GAANNNNTTC	1 cut(s)	2111
XspI	CTAG	6 cut(s)	393, 801, 1419, 1433, 2013, 2177
ZrmI	AGTACT	1 cut(s)	1955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.