Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0006157

Physical Location & Seq

Genomic Coordinates Forward (+)

6408833 .. 6411870

Gene Structure 3038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCAAGGGCAGAGGGGTACTATTGGTTCCTTGCCTGAATTCCTAGAATTTGACCATGGAAGTGCATCAAACGATGCTGCTCTAGATCAGCAAATTTGCTGGAATAGCACACGGAATCCTGCAGAAAGGATTCCAGACTATGTACAATCACCCGGTGATATGAATGTTGGGTTTGTGAATTCTAGGGGACAGGAGCGACAACACTTGAGTAGATGGTGCCTAGGTGAACCTAGTTCTAGCAACTCACAGAGTGAGGTAAGTAGTGATGAGCTGAAACCAGATCCGAGATGGTCATCTTCAGTGGATCCTTGTGTAGAAGCTGCTTCAAGATTAGAAGAGCGACACTATGAACCAACTAATAACCTTTCACTGGACAACAATGTGAATACCATTTTTACACAAAGTTCAAGTTCTGATGCAATCCCACAGAATCTGAACTTGAATGCATGTTTTGCGGGCCATGGTGGTGATAATAGTCAAGTAATGGAATGTCCTAACACATTCAAGTATAACGTTTCTGAAAATGAGCAAATTCGACCTCCTAGCAGTTCTAATTCCTTTATGCTTCCTTCTGGAGGTGCTGGATTTTTAATGGGAGAGAATGATGGCAGATTGGGTAGTTCATTGGAGGGTCGTCGTGTATCTTGTAAAAGAAAGGCCATGGAGGGAAATATAGGGCAGTCTTCTTTAAGTGGAAGTTGCAGTTACTTTCAGCATACAGACAGTGGTGGAAGGACTTCTGTTCCCGCTCACTATAATGCAGTCAGCAGCCTAAGCATATCCACTCCATCAGAACAGGGGAATTCAAGACTTGGAGTAGTTGGGAGAGCACTTGCTTCTGACAGCCTTCCTGATTCAAATGCTGGAAGAAGCTCAGAAAGCACTCATAGGAACCTCCGTGTGAGGATAAACCCTTCAAATCAGCAAAATTCTATACACTCAAATAGGTTCTCGATGGGGAGGGCTGCTAGGCATTCTAGTATTTCCTCTTCGAATCATTCACCAAGTCTTCTTCCAGTTGATCATAATATGGACCTGAGACCAGCACCAGCGTTAGATAATATGAGTTCACAGAACCAGCCGGTTGTCATCCATGTTCCTGCTTTGCCGCAAAATGTGCAATCGTTGAGATGGAGTGGAGGGTCTAGCTCAAGAACTGGCAACTTATCAAATTCTGTGGTTTATGGAGACAGAGATGCTCCACAGCCTCCACCACGTGAGGAAGGGAGCTCAAGAAGCATGGAGAGACACATTTTGGATCATCCTATTTTCGTACCAGCAACTGAACTGAGAAATTCAACTCGGCATCCTGCAGGTGCATCTAACAGAAATTTACCTGGTGGAAATGCAAGTATTCCTGGTAATGTTGCTTCAGCATCCCGGACTGGCACAAGTTCAGGTGTTAATCCAGCAGCTGCACCTACGTGGGTTCCTCCTCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGCCGATCGTTATTTTCTGCTTCTGGTAGTGAGCCTGGGAGTCAGGGCACTAATTATTTGCCTCTGCATTCGGGTCCTGCATCATCACCAGAGGTTGAGAGTTCATCTGGTACAGGTAACCAAGGTCATCATCGGTCTCACCCAAGGTCAGCATCTTGGATGGAGAGACATGGCGATGGTGGACTTGGACTTCCATATTCATTACGGACTTTGGCTGCTGCAGGGGGTGAAGGAAGTAGCAGGCTGGTATCTGAGATTTGCAATGTCCTGGGTCTCATGCGTAGGGGCGAGAGCTTGCGATTTGAGGATGTTATGATTCTTGATCAGTCAGTCCTTTTTGGGGTGGCTGATATTCACGACCGACATAGAGATATGCGACTTGATGTTGATAATATGTCTTATGAGGAATTATTGGCTCTGGAAGAGCGTATCGGAAACGTGAACACTGGATTAAGTGAAGAAACCATATCAAAGCGCTTGAAACATAAGAAGTATATTGCAGTAGGATCTTCGGCAGATACAGAGCCATGCTGTGTGTGCCAGGAGGAATACAATGGTGGAGAAGATCTTGGAACGCTCGAATGCGGACATGATTTCCACAGCGAGTGCATAAAACAATGGCTGATGCACAAGAATTTGTGCCCCATCTGTAAAACTACAGCCCTGGCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009057 GO:0009791 GO:0009908 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0022414 GO:0030163 GO:0031624 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0040008 GO:0042127 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0045926 GO:0046620 GO:0046621 GO:0048367 GO:0048437 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051239 GO:0051240 GO:0051241 GO:0051603 GO:0051865 GO:0061458 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0090567 GO:0099402 GO:0140096 GO:1900055 GO:1900057 GO:1901564 GO:1901565 GO:1901575 GO:1905623 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

719

Amino Acids

77.55

Weight (kDa)

6.11

Isoelectric Point (pI)

66.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	668 - 712	1e-08	RING-H2 zinc finger domain
zf-RING_2	PF13639	671 - 712	7.3e-12	Ring finger domain
zf-C3HC4_2	PF13923	671 - 711	7.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	671 - 711	5.1e-06	Zinc finger, C3HC4 type (RING finger)
zf-RING_11	PF17123	671 - 698	9.1e-06	RING-like zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45180 AT1G45180 AT1G45180 AT1G45180 AT5G42940 AT5G42940
fragaria_vesca	FvH4_2g34090 FvH4_2g34090
malus_domestica	MD08G1097400.v1.1 MD15G1079700.v1.1
prunus_persica	Prupe.1G432700_v2.0.a1
pyrus_communis	pycom08g07950 pycom15g07410 pycom15g07420
rosa_chinensis	RchiOBHm_Chr6g0308261
rosa_laevigata	RLG00000010653
rosa_multiflora	Rmu_ssc0000355.1_g000008
rosa_roxburghii	Rroxscaffold_7G00160310
rosa_rugosa	Rorug06G0365500 Rorug06G0365600 Rorug06G0365700 Rorug06G0365800
rosa_samantha	Rh6AG474500 Rh6BG485200 Rh6CG490200 Rh6DG476600
rosa_wichuraiana	Rw6G041390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1304
Acc36I	ACCTGC	1 cut(s)	1304
AccB1I	GGYRCC	1 cut(s)	216
AccBSI	CCGCTC	1 cut(s)	749
AciI	CCGC	5 cut(s)	455, 747, 1109, 1451, 2067
AclI	AACGTT	1 cut(s)	513
AclWI	GGATC	5 cut(s)	275, 299, 312, 1266, 1996
AcuI	CTGAAG	2 cut(s)	282, 1356
AcvI	CACGTG	1 cut(s)	1217
AdeI	CACNNNGTG	3 cut(s)	155, 251, 1217
AfaI	GTAC	4 cut(s)	19, 144, 1275, 1594
AfeI	AGCGCT	1 cut(s)	1958
AfiI	CCNNNNNNNGG	3 cut(s)	370, 575, 1822
AgsI	TTSAA	9 cut(s)	327, 408, 442, 505, 807, 858, 918, 1299, 1963
AjnI	CCWGG	6 cut(s)	1336, 1357, 1516, 1749, 2022, 2145
AleI	CACNNNNGTG	1 cut(s)	1423
AluBI	AGCT	7 cut(s)	271, 320, 873, 1149, 1230, 1415, 1776
AluI	AGCT	7 cut(s)	271, 320, 873, 1149, 1230, 1415, 1776
Alw21I	GWGCWC	2 cut(s)	832, 1232
Alw26I	GTCTC	6 cut(s)	1033, 1182, 1240, 1623, 1642, 1760
AlwI	GGATC	5 cut(s)	275, 299, 312, 1266, 1996
AlwNI	CAGNNNCTG	3 cut(s)	433, 1283, 1415
Aor51HI	AGCGCT	1 cut(s)	1958
AoxI	GGCC	2 cut(s)	457, 657
ApeKI	GCWGC	8 cut(s)	77, 320, 768, 965, 1412, 1415, 1697, 1700
Asp700I	GAANNNNTTC	3 cut(s)	129, 736, 1479
AspA2I	CCTAGG	1 cut(s)	220
AspLEI	GCGC	1 cut(s)	1959
AspS9I	GGNCC	3 cut(s)	457, 1033, 1556
AsuC2I	CCSGG	2 cut(s)	153, 1381
AsuHPI	GGTGA	8 cut(s)	141, 167, 236, 479, 993, 1560, 1613, 1721
AsuII	TTCGAA	1 cut(s)	992
AvaII	GGWCC	2 cut(s)	1033, 1556
AvrII	CCTAGG	1 cut(s)	220
BaeGI	GKGCMC	2 cut(s)	1532, 2126
BamHI	GGATCC	1 cut(s)	304
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	1232
BarI	GAAGNNNNNNTAC	4 cut(s)	973, 1005, 1354, 1386
BbrPI	CACGTG	1 cut(s)	1217
BbsI	GAAGAC	2 cut(s)	675, 1001
Bbv12I	GWGCWC	2 cut(s)	832, 1232
BbvI	GCAGC	8 cut(s)	64, 307, 780, 952, 1402, 1424, 1684, 1687
BccI	CCATC	9 cut(s)	207, 282, 599, 796, 949, 1125, 1636, 1652, 2135
BcgI	CGANNNNNNTGC	2 cut(s)	1442, 1476
BciT130I	CCWGG	6 cut(s)	1338, 1359, 1518, 1751, 2024, 2147
BclI	TGATCA	2 cut(s)	1021, 1804
BcnI	CCSGG	2 cut(s)	153, 1381
BcoDI	GTCTC	6 cut(s)	1033, 1182, 1240, 1623, 1642, 1760
BfmI	CTRYAG	4 cut(s)	120, 1311, 1701, 2139
BfoI	RGCGCY	1 cut(s)	1960
BfuAI	ACCTGC	1 cut(s)	1304
BglII	AGATCT	1 cut(s)	2047
BisI	GCNGC	9 cut(s)	78, 321, 769, 966, 1109, 1413, 1416, 1698, 1701
BlnI	CCTAGG	1 cut(s)	220
BlsI	GCNGC	9 cut(s)	79, 322, 770, 967, 1110, 1414, 1417, 1699, 1702
Bme1390I	CCNGG	8 cut(s)	153, 1338, 1359, 1381, 1518, 1751, 2024, 2147
Bme18I	GGWCC	2 cut(s)	1033, 1556
BmgT120I	GGNCC	3 cut(s)	457, 1033, 1556
BmiI	GGNNCC	6 cut(s)	28, 218, 306, 893, 1431, 1557
BmrFI	CCNGG	8 cut(s)	153, 1338, 1359, 1381, 1518, 1751, 2024, 2147
BpiI	GAAGAC	2 cut(s)	675, 1001
BpmI	CTGGAG	1 cut(s)	594
Bpu10I	CCTNAGC	1 cut(s)	773
Bpu14I	TTCGAA	1 cut(s)	992
BpuEI	CTTGAG	3 cut(s)	226, 1135, 1216
BpuMI	CCSGG	2 cut(s)	153, 1381
BsaAI	YACGTR	2 cut(s)	1217, 1425
BsaBI	GATNNNNATC	1 cut(s)	292
BsaI	GGTCTC	3 cut(s)	1033, 1623, 1760
BsaJI	CCNNGG	9 cut(s)	55, 220, 460, 660, 1517, 1603, 1625, 1750, 2145
Bsc4I	CCNNNNNNNGG	3 cut(s)	370, 575, 1822
Bse118I	RCCGGY	1 cut(s)	1081
Bse1I	ACTGG	5 cut(s)	375, 1016, 1162, 1390, 1933
Bse3DI	GCAATG	1 cut(s)	1750
Bse8I	GATNNNNATC	1 cut(s)	292
BseBI	CCWGG	6 cut(s)	1338, 1359, 1518, 1751, 2024, 2147
BseDI	CCNNGG	9 cut(s)	55, 220, 460, 660, 1517, 1603, 1625, 1750, 2145
BseGI	GGATG	7 cut(s)	1089, 1261, 1306, 1376, 1447, 1647, 1795
BseJI	GATNNNNATC	1 cut(s)	292
BseLI	CCNNNNNNNGG	3 cut(s)	370, 575, 1822
BseMI	GCAATG	1 cut(s)	1750
BseMII	CTCAG	4 cut(s)	888, 1028, 1280, 1725
BseNI	ACTGG	5 cut(s)	375, 1016, 1162, 1390, 1933
BseRI	GAGGAG	1 cut(s)	1425
BseSI	GKGCMC	2 cut(s)	1532, 2126
BseXI	GCAGC	8 cut(s)	64, 307, 780, 952, 1402, 1424, 1684, 1687
BsgI	GTGCAG	1 cut(s)	1401
Bsh1285I	CGRYCG	2 cut(s)	1490, 1843
BshFI	GGCC	2 cut(s)	459, 659
BshNI	GGYRCC	1 cut(s)	216
BsiEI	CGRYCG	2 cut(s)	1490, 1843
BsiHKAI	GWGCWC	2 cut(s)	832, 1232
BsiSI	CCGG	3 cut(s)	153, 1082, 1381
BslFI	GGGAC	1 cut(s)	201
BslI	CCNNNNNNNGG	3 cut(s)	370, 575, 1822
BsmAI	GTCTC	6 cut(s)	1033, 1182, 1240, 1623, 1642, 1760
BsmFI	GGGAC	1 cut(s)	201
BsmI	GAATGC	4 cut(s)	448, 973, 1549, 2069
BsnI	GGCC	2 cut(s)	459, 659
Bso31I	GGTCTC	3 cut(s)	1033, 1623, 1760
Bsp119I	TTCGAA	1 cut(s)	992
Bsp1286I	GDGCHC	4 cut(s)	832, 1232, 1532, 2126
Bsp1407I	TGTACA	1 cut(s)	142
Bsp143I	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
Bsp19I	CCATGG	3 cut(s)	55, 460, 660
BspACI	CCGC	5 cut(s)	455, 747, 1109, 1451, 2067
BspANI	GGCC	2 cut(s)	459, 659
BspCNI	CTCAG	4 cut(s)	887, 1029, 1281, 1726
BspLI	GGNNCC	6 cut(s)	28, 218, 306, 893, 1431, 1557
BspMAI	CTGCAG	3 cut(s)	124, 1315, 1705
BspMI	ACCTGC	1 cut(s)	1304
BspPI	GGATC	5 cut(s)	275, 299, 312, 1266, 1996
BspQI	GCTCTTC	2 cut(s)	330, 1899
BspT104I	TTCGAA	1 cut(s)	992
BspT107I	GGYRCC	1 cut(s)	216
BspTNI	GGTCTC	3 cut(s)	1033, 1623, 1760
BsrBI	CCGCTC	1 cut(s)	749
BsrDI	GCAATG	1 cut(s)	1750
BsrFI	RCCGGY	1 cut(s)	1081
BsrGI	TGTACA	1 cut(s)	142
BsrI	ACTGG	5 cut(s)	375, 1016, 1162, 1390, 1933
BssAI	RCCGGY	1 cut(s)	1081
BssECI	CCNNGG	9 cut(s)	55, 220, 460, 660, 1517, 1603, 1625, 1750, 2145
BssMI	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
BssT1I	CCWWGG	6 cut(s)	55, 220, 460, 660, 1603, 1625
Bst2UI	CCWGG	6 cut(s)	1338, 1359, 1518, 1751, 2024, 2147
Bst4CI	ACNGT	1 cut(s)	725
Bst6I	CTCTTC	3 cut(s)	330, 994, 1899
BstAPI	GCANNNNNTGC	2 cut(s)	452, 1117
BstAUI	TGTACA	1 cut(s)	142
BstBAI	YACGTR	2 cut(s)	1217, 1425
BstBI	TTCGAA	1 cut(s)	992
BstC8I	GCNNGC	3 cut(s)	457, 1724, 1778
BstDEI	CTNAG	5 cut(s)	773, 874, 1037, 1289, 1734
BstDSI	CCRYGG	3 cut(s)	55, 460, 660
BstEII	GGTNACC	1 cut(s)	1598
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	7 cut(s)	1089, 1261, 1306, 1376, 1447, 1647, 1795
BstH2I	RGCGCY	1 cut(s)	1960
BstHHI	GCGC	1 cut(s)	1959
BstKTI	GATC	9 cut(s)	88, 283, 307, 1024, 1261, 1490, 1807, 1991, 2050
BstMAI	GTCTC	6 cut(s)	1033, 1182, 1240, 1623, 1642, 1760
BstMBI	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
BstMCI	CGRYCG	2 cut(s)	1490, 1843
BstMWI	GCNNNNNNNGC	7 cut(s)	105, 452, 774, 879, 1117, 1236, 2019
BstNI	CCWGG	6 cut(s)	1338, 1359, 1518, 1751, 2024, 2147
BstNSI	RCATGY	1 cut(s)	450
BstPI	GGTNACC	1 cut(s)	1598
BstSCI	CCNGG	8 cut(s)	151, 1336, 1357, 1379, 1516, 1749, 2022, 2145
BstSFI	CTRYAG	4 cut(s)	120, 1311, 1701, 2139
BstSLI	GKGCMC	2 cut(s)	1532, 2126
BstV1I	GCAGC	8 cut(s)	64, 307, 780, 952, 1402, 1424, 1684, 1687
BstV2I	GAAGAC	2 cut(s)	675, 1001
BstX2I	RGATCY	4 cut(s)	280, 304, 1988, 2047
BstYI	RGATCY	4 cut(s)	280, 304, 1988, 2047
BsuRI	GGCC	2 cut(s)	459, 659
BtgI	CCRYGG	3 cut(s)	55, 460, 660
BtgZI	GCGATG	1 cut(s)	1671
BtsCI	GGATG	7 cut(s)	1089, 1261, 1306, 1376, 1447, 1647, 1795
BtsIMutI	CAGTG	4 cut(s)	306, 368, 730, 1926
BveI	ACCTGC	1 cut(s)	1304
Cac8I	GCNNGC	3 cut(s)	457, 1724, 1778
CaiI	CAGNNNCTG	3 cut(s)	433, 1283, 1415
CfoI	GCGC	1 cut(s)	1959
Cfr10I	RCCGGY	1 cut(s)	1081
Cfr13I	GGNCC	3 cut(s)	457, 1033, 1556
CsiI	ACCWGGT	1 cut(s)	1336
Csp6I	GTAC	4 cut(s)	18, 143, 1274, 1593
CspCI	CAANNNNNGTGG	2 cut(s)	1158, 1193
CviQI	GTAC	4 cut(s)	18, 143, 1274, 1593
DdeI	CTNAG	5 cut(s)	773, 874, 1037, 1289, 1734
DpnI	GATC	9 cut(s)	87, 282, 306, 1023, 1260, 1489, 1806, 1990, 2049
DpnII	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
DraIII	CACNNNGTG	3 cut(s)	155, 251, 1217
Eam1104I	CTCTTC	3 cut(s)	330, 994, 1899
EarI	CTCTTC	3 cut(s)	330, 994, 1899
Ecl136II	GAGCTC	1 cut(s)	1230
Eco130I	CCWWGG	6 cut(s)	55, 220, 460, 660, 1603, 1625
Eco24I	GRGCYC	1 cut(s)	1232
Eco31I	GGTCTC	3 cut(s)	1033, 1623, 1760
Eco47I	GGWCC	2 cut(s)	1033, 1556
Eco47III	AGCGCT	1 cut(s)	1958
Eco53kI	GAGCTC	1 cut(s)	1230
Eco57I	CTGAAG	2 cut(s)	282, 1356
Eco72I	CACGTG	1 cut(s)	1217
Eco91I	GGTNACC	1 cut(s)	1598
EcoICRI	GAGCTC	1 cut(s)	1230
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoO109I	RGGNCCY	1 cut(s)	1556
EcoO65I	GGTNACC	1 cut(s)	1598
EcoRI	GAATTC	3 cut(s)	38, 178, 802
EcoRII	CCWGG	6 cut(s)	1336, 1357, 1516, 1749, 2022, 2145
EcoT14I	CCWWGG	6 cut(s)	55, 220, 460, 660, 1603, 1625
EcoT22I	ATGCAT	1 cut(s)	448
EcoT38I	GRGCYC	1 cut(s)	1232
ErhI	CCWWGG	6 cut(s)	55, 220, 460, 660, 1603, 1625
FaqI	GGGAC	1 cut(s)	201
FauI	CCCGC	2 cut(s)	448, 754
FbaI	TGATCA	2 cut(s)	1021, 1804
Fnu4HI	GCNGC	9 cut(s)	78, 321, 769, 966, 1109, 1413, 1416, 1698, 1701
FokI	GGATG	7 cut(s)	1076, 1248, 1293, 1363, 1434, 1654, 1802
FriOI	GRGCYC	1 cut(s)	1232
Fsp4HI	GCNGC	9 cut(s)	78, 321, 769, 966, 1109, 1413, 1416, 1698, 1701
GlaI	GCGC	1 cut(s)	1958
GluI	GCNGC	9 cut(s)	78, 321, 769, 966, 1109, 1413, 1416, 1698, 1701
GsuI	CTGGAG	1 cut(s)	594
HaeII	RGCGCY	1 cut(s)	1960
HaeIII	GGCC	2 cut(s)	459, 659
HapII	CCGG	3 cut(s)	153, 1082, 1381
HhaI	GCGC	1 cut(s)	1959
Hin6I	GCGC	1 cut(s)	1957
HinP1I	GCGC	1 cut(s)	1957
HinfI	GANTC	7 cut(s)	115, 130, 430, 854, 994, 1522, 1798
HpaII	CCGG	3 cut(s)	153, 1082, 1381
HphI	GGTGA	8 cut(s)	141, 167, 236, 479, 993, 1560, 1613, 1721
Hpy166II	GTNNAC	4 cut(s)	227, 1070, 1664, 1924
Hpy8I	GTNNAC	4 cut(s)	227, 1070, 1664, 1924
Hpy99I	CGWCG	1 cut(s)	639
HpyAV	CCTTC	6 cut(s)	579, 726, 857, 924, 1217, 1706
HpyCH4III	ACNGT	1 cut(s)	725
HpyCH4IV	ACGT	4 cut(s)	513, 1216, 1424, 1920
HpyF10VI	GCNNNNNNNGC	7 cut(s)	105, 452, 774, 879, 1117, 1236, 2019
HpyF3I	CTNAG	5 cut(s)	773, 874, 1037, 1289, 1734
HpySE526I	ACGT	4 cut(s)	513, 1216, 1424, 1920
HspAI	GCGC	1 cut(s)	1957
Ksp22I	TGATCA	2 cut(s)	1021, 1804
Kzo9I	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
LguI	GCTCTTC	2 cut(s)	330, 1899
LmnI	GCTCC	3 cut(s)	193, 1204, 1227
Lsp1109I	GCAGC	8 cut(s)	64, 307, 780, 952, 1402, 1424, 1684, 1687
MabI	ACCWGGT	1 cut(s)	1336
MaeII	ACGT	4 cut(s)	513, 1216, 1424, 1920
MaeIII	GTNAC	2 cut(s)	704, 1598
MalI	GATC	9 cut(s)	87, 282, 306, 1023, 1260, 1489, 1806, 1990, 2049
MbiI	CCGCTC	1 cut(s)	749
MboI	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
MflI	RGATCY	4 cut(s)	280, 304, 1988, 2047
MhlI	GDGCHC	4 cut(s)	832, 1232, 1532, 2126
MlyI	GAGTC	1 cut(s)	1531
Mph1103I	ATGCAT	1 cut(s)	448
MroXI	GAANNNNTTC	3 cut(s)	129, 736, 1479
MseI	TTAA	4 cut(s)	590, 689, 1404, 1934
MslI	CAYNNNNRTG	5 cut(s)	60, 465, 756, 1423, 1656
MspA1I	CMGCKG	1 cut(s)	1415
MspI	CCGG	3 cut(s)	153, 1082, 1381
MspR9I	CCNGG	8 cut(s)	153, 1338, 1359, 1381, 1518, 1751, 2024, 2147
Mva1269I	GAATGC	4 cut(s)	448, 973, 1549, 2069
MvaI	CCWGG	6 cut(s)	1338, 1359, 1518, 1751, 2024, 2147
MwoI	GCNNNNNNNGC	7 cut(s)	105, 452, 774, 879, 1117, 1236, 2019
NciI	CCSGG	2 cut(s)	153, 1381
NcoI	CCATGG	3 cut(s)	55, 460, 660
NdeII	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
NlaIV	GGNNCC	6 cut(s)	28, 218, 306, 893, 1431, 1557
NmeAIII	GCCGAG	1 cut(s)	1282
NsiI	ATGCAT	1 cut(s)	448
NspI	RCATGY	1 cut(s)	450
NspV	TTCGAA	1 cut(s)	992
OliI	CACNNNNGTG	1 cut(s)	1423
PaqCI	CACCTGC	1 cut(s)	1304
PciSI	GCTCTTC	2 cut(s)	330, 1899
PctI	GAATGC	4 cut(s)	448, 973, 1549, 2069
PdmI	GAANNNNTTC	3 cut(s)	129, 736, 1479
PfeI	GAWTC	6 cut(s)	115, 130, 430, 854, 994, 1798
PfoI	TCCNGGA	1 cut(s)	1379
PkrI	GCNGC	9 cut(s)	79, 322, 770, 967, 1110, 1414, 1417, 1699, 1702
Ple19I	CGATCG	1 cut(s)	1490
PleI	GAGTC	1 cut(s)	1530
PmaCI	CACGTG	1 cut(s)	1217
PmlI	CACGTG	1 cut(s)	1217
PpsI	GAGTC	1 cut(s)	1530
Ppu21I	YACGTR	2 cut(s)	1217, 1425
PpuMI	RGGWCCY	1 cut(s)	1556
Psp124BI	GAGCTC	1 cut(s)	1232
Psp1406I	AACGTT	1 cut(s)	513
Psp5II	RGGWCCY	1 cut(s)	1556
Psp6I	CCWGG	6 cut(s)	1336, 1357, 1516, 1749, 2022, 2145
PspCI	CACGTG	1 cut(s)	1217
PspEI	GGTNACC	1 cut(s)	1598
PspGI	CCWGG	6 cut(s)	1336, 1357, 1516, 1749, 2022, 2145
PspN4I	GGNNCC	6 cut(s)	28, 218, 306, 893, 1431, 1557
PspPI	GGNCC	3 cut(s)	457, 1033, 1556
PspPPI	RGGWCCY	1 cut(s)	1556
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstI	CTGCAG	3 cut(s)	124, 1315, 1705
PstNI	CAGNNNCTG	3 cut(s)	433, 1283, 1415
PsuI	RGATCY	4 cut(s)	280, 304, 1988, 2047
PvuI	CGATCG	1 cut(s)	1490
PvuII	CAGCTG	1 cut(s)	1415
RsaI	GTAC	4 cut(s)	19, 144, 1275, 1594
RsaNI	GTAC	4 cut(s)	18, 143, 1274, 1593
RseI	CAYNNNNRTG	5 cut(s)	60, 465, 756, 1423, 1656
SacI	GAGCTC	1 cut(s)	1232
SapI	GCTCTTC	2 cut(s)	330, 1899
SaqAI	TTAA	4 cut(s)	590, 689, 1404, 1934
SatI	GCNGC	9 cut(s)	78, 321, 769, 966, 1109, 1413, 1416, 1698, 1701
Sau3AI	GATC	9 cut(s)	85, 280, 304, 1021, 1258, 1487, 1804, 1988, 2047
Sau96I	GGNCC	3 cut(s)	457, 1033, 1556
SbfI	CCTGCAGG	1 cut(s)	1315
SchI	GAGTC	1 cut(s)	1531
ScrFI	CCNGG	8 cut(s)	153, 1338, 1359, 1381, 1518, 1751, 2024, 2147
SdaI	CCTGCAGG	1 cut(s)	1315
SduI	GDGCHC	4 cut(s)	832, 1232, 1532, 2126
SexAI	ACCWGGT	1 cut(s)	1336
SfcI	CTRYAG	4 cut(s)	120, 1311, 1701, 2139
SfuI	TTCGAA	1 cut(s)	992
SinI	GGWCC	2 cut(s)	1033, 1556
SmiMI	CAYNNNNRTG	5 cut(s)	60, 465, 756, 1423, 1656
SmlI	CTYRAG	3 cut(s)	205, 1150, 1231
SmoI	CTYRAG	3 cut(s)	205, 1150, 1231
Sse8387I	CCTGCAGG	1 cut(s)	1315
SsiI	CCGC	5 cut(s)	455, 747, 1109, 1451, 2067
SstI	GAGCTC	1 cut(s)	1232
StyD4I	CCNGG	8 cut(s)	151, 1336, 1357, 1379, 1516, 1749, 2022, 2145
StyI	CCWWGG	6 cut(s)	55, 220, 460, 660, 1603, 1625
TaaI	ACNGT	1 cut(s)	725
TaiI	ACGT	4 cut(s)	516, 1219, 1427, 1923
TaqI	TCGA	5 cut(s)	535, 953, 992, 1462, 2061
TaqII	GACCGA	2 cut(s)	1605, 1857
TatI	WGTACW	1 cut(s)	142
TauI	GCSGC	1 cut(s)	1111
TfiI	GAWTC	6 cut(s)	115, 130, 430, 854, 994, 1798
Tru1I	TTAA	4 cut(s)	590, 689, 1404, 1934
Tru9I	TTAA	4 cut(s)	590, 689, 1404, 1934
TscAI	CASTG	4 cut(s)	306, 375, 730, 1933
TseI	GCWGC	8 cut(s)	77, 320, 768, 965, 1412, 1415, 1697, 1700
TspDTI	ATGAA	5 cut(s)	176, 363, 612, 1575, 1671
TspGWI	ACGGA	3 cut(s)	127, 887, 1702
TspRI	CASTG	4 cut(s)	306, 375, 730, 1933
VpaK11BI	GGWCC	2 cut(s)	1033, 1556
XagI	CCTNNNNNAGG	1 cut(s)	573
XbaI	TCTAGA	1 cut(s)	82
XceI	RCATGY	1 cut(s)	450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	285
XmaJI	CCTAGG	1 cut(s)	220
XmnI	GAANNNNTTC	3 cut(s)	129, 736, 1479
Zsp2I	ATGCAT	1 cut(s)	448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.