Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Reverse (-)

14102614 .. 14107726

Gene Structure 5113 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGACGGCCTCCGTCGAGAACCGCCAGTTCCCCCAGCTCAACCCGCCAATAAACGGAGTCGTCCGCTCCTTCAACTTCTCTGATCCCACACCCCCGAAAAACACCCCCTTCGTTGACAGCAACGACTCGTCGTCCGACGACGAAAATGACGACAGCGTCGTCCAGGAATACACGGATTTAATCCGGAGAGGCAACAACGAATTAGAGCCGTCGATCTTGGACCCCAGAGATGAAGCCACGTCAGACAGCTGGGTGCGTCGTAACTCTTCAATGGTCCGCCTCACTGGAAAACATCCCTTCAACTGCGAACCGCCACTCACCCGCCTCATGCACCACGGATTCATCACCCCGGTCCCACTCCACTACGTTCGCAACCACGGCGTGGTCCCCAAGGCTACTTGGCAGGACTGGACTGTGGAGATCACCGGCCTTGTCCGCCGACCGACCCGGTTCACCATGGACCAGCTCGTCCGTGAATTCAAGCCACGAGAGCTCCCAGTTACCCTTGTCTGCGCGGGAAACCGGAGGAAGGAACAGAATCTCGTCAAGAAGACAATCGGCTTCAACTGGGGTGCCGCTGGCATCTCCAACTCCTTGTGGCGCGGCGTCCCACTCTGCGACTTGCTCAAGCGGTGCGGGATCCGCAGCCGCAAGAACGGCGCCCTCAACGTGTGCTTTGAGGGGGCCGAGGACCTGCCCGGTGGCGGTGGAGCCAAGTACGGGACGAGCTTGAGAAAGGAGGTGGCGATGGACCCCTCGAGGGATATTATCCTAGCATACATGCAAAACGGGGAGCTTTTGGCGCCGGATCACGGGTTTCCGGTACGGGTCATAATACCCGGGTTTATCGGGGGTCGGATGGTGAAGTGGTTGAAGCGCATCGTCGTAACGACGTCGGAATCCGACAACTACTACCACTTCAAGGATAATCGAGTGCTCCCGTCGCACGTCGATGCGGAGCTAGCCAACGCTGAAGCGTGGTGGTACAAGCCGGAGTATATCATTAACGAGCTGAATATAAACTCCGTTATAACAACGCCGTGTCACGAGGAGATATTGGCGATCAACTCGTATACAACTCAGAGGCCGTATACGATGAAAGGCTACGCATACTCAGGCGGCGGGAAGAAAGTCACACGAGTGGAGATAACAATGGATGGCGGTGAAACGTGGCATGTGTGCACATTAGACCACCAGGAGAAGCCAAACAAGTACGGGAAATACTGGTGCTGGTGTTTCTGGTCACTAGAAGTGGAGGTGCTCGACCTACTCGCTGCCAAAGAGATTGCAGTGCGAGCTTGGGACGAGACACTCAATACTCAACCCGAGAAACTCATTTGGAATGTCATGGGAATGATGAACAACTGCTGGTTTCGGGTGAAAACCAATGTGTGCAAACCACACAGGGGAGAGATAGGACTAGTGTTTGAGCATCCAACTCAACCTGGAAACCAATCAGGCGGATGGATGGCCAAAGAAAAACGCTTGGACTCTGAATCCAACACAATCTTAAAGAAAAGTGTTTCAACACCCTTCATGAACACTAGTGCAACCAAGATGTACTCAATTTCAGATGTTAAGAAGCACAACTCTTCTCAATCTGCCTGGATCATTGTCCATGGCCATGTCTACGACTGCACTAGCTTCCTCAACGACCACCCTGGTGGCGCTGATAGCATTCTCATCAACGCTGGCACTGACTGCACCGAAGAGTTTGACGCCATCCACTCGGAAAAGGCCAAGAAAATGATTGAGGATTATAGAATTGGAGAGTTGGTGTCCACGAATTATGCTTCGGACTCCTCATCTAGTTCTCCTAATAACTCCGTGCACGGGCCACCAAGAACAACGTCAGTGTTGGACCTTATTTCCTCTAACATGGCACAGTTAGCCCCAATCAAAGAAGTAACGCAGTCAATAAGTGTCGCACTTATTCCGCGTGAGAAAATCTCATGTAAGCTCATAGCCAAGATGTCGATCTCTCACGACGTGAGGCTCTTCAGGTTTGGATTGCCTTCAGAAGACCAAGTTTTGGGATTGCCAGTGGGAAAGCACATTTTCGTGTGTGCTACAATTGAAGACAAGCTTTGCATGAGGGCTTACACTCCAAGCAGCTCAGTTGATGAAGTTGGGTACTTTGATTTGGTGGTCAAGGTTTACTTCAAAAATGTGCACCCTAAGTTCCCAAATGGGGGAATCATGTCACAGTATTTGGACTCACTGCCAATAGGTGCCGCACTAGACATAAAGGGTCCCTTAGGGCACATAGAGTACACTGGTCGTGGTAATTTTTTGGTCAATGGCAAGCCAAAGTTTGCAAAGAAGCTTGCCATGCTGGCTGGTGGGACCGGGATCACCCCAATTTACCAAGTGGCTCAGGCCATTTTGAAGGACCCAGAAGATGAGACTGAAATGTATGTGGTGTATGCAAATCGGACGGAAGATGATATTTTGCTGAGGGAAGAGCTTGATGGTTGGGCTAAACAACATGAGAGGTTCACGGTTTGGTATGTGGTGGAGAATGGCAAGGAAGGGTGGGAATACAGTGTGGGATTCATCACGGAGAGTGTGCTGAGAGAGCACATTCCTAATGGATCGAACGATGTTCTTGCACTAGCATGCGGGCCCCCTCCGATGATTAAGTTTGCCGTGCAACCGAATTTGGAGAAGATGAATTATGATACCACAAATTCATTGCTGTTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

903

Amino Acids

101.21

Weight (kDa)

6.3

Isoelectric Point (pI)

42.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Oxidored_molyb	PF00174	126 - 305	4.8e-55	Oxidoreductase molybdopterin binding domain
Mo-co_dimer	PF03404	333 - 464	1.8e-56	Mo-co oxidoreductase dimerisation domain
Cyt-b5	PF00173	524 - 592	6.9e-27	Cytochrome b5-like Heme/Steroid binding domain
FAD_binding_6	PF00970	652 - 758	2e-36	Oxidoreductase FAD-binding domain
NAD_binding_1	PF00175	778 - 884	7.4e-35	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1031
AasI	GACNNNNNNGTC	3 cut(s)	155, 158, 467
AatII	GACGTC	1 cut(s)	896
AbsI	CCTCGAGG	1 cut(s)	757
Acc36I	ACCTGC	1 cut(s)	702
AccB1I	GGYRCC	4 cut(s)	572, 659, 802, 2231
AccB7I	CCANNNNNTGG	2 cut(s)	382, 2032
AccBSI	CCGCTC	1 cut(s)	66
AccI	GTMKAC	3 cut(s)	1073, 1091, 1629
AccII	CGCG	3 cut(s)	515, 603, 1939
AccIII	TCCGGA	1 cut(s)	183
AclWI	GGATC	7 cut(s)	77, 634, 647, 816, 1616, 2360, 2602
AcoI	YGGCCR	2 cut(s)	1470, 1621
AcsI	RAATTY	3 cut(s)	476, 2659, 2689
AcuI	CTGAAG	3 cut(s)	993, 1984, 2001
AcyI	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
AdeI	CACNNNGTG	2 cut(s)	382, 1990
AfaI	GTAC	7 cut(s)	719, 825, 986, 1214, 1562, 2135, 2273
AflIII	ACRYGT	1 cut(s)	669
AhdI	GACNNNNNGTC	1 cut(s)	130
AhlI	ACTAGT	2 cut(s)	1420, 1544
AjiI	CACGTC	3 cut(s)	240, 949, 1990
AjnI	CCWGG	5 cut(s)	162, 1194, 1444, 1604, 1660
AleI	CACNNNNGTG	2 cut(s)	1139, 1662
Alw21I	GWGCWC	7 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2583
Alw26I	GTCTC	2 cut(s)	1301, 2399
Alw44I	GTGCAC	3 cut(s)	1180, 1829, 2171
AlwI	GGATC	7 cut(s)	77, 634, 647, 816, 1616, 2360, 2602
Ama87I	CYCGRG	3 cut(s)	757, 839, 1325
Aor13HI	TCCGGA	1 cut(s)	183
ApaI	GGGCCC	1 cut(s)	2628
ApaLI	GTGCAC	3 cut(s)	1180, 1829, 2171
ApeKI	GCWGC	3 cut(s)	645, 1274, 2112
ApoI	RAATTY	3 cut(s)	476, 2659, 2689
AspLEI	GCGC	6 cut(s)	515, 603, 662, 805, 879, 1670
AsuC2I	CCSGG	6 cut(s)	350, 448, 699, 840, 841, 2350
AsuHPI	GGTGA	8 cut(s)	310, 337, 415, 445, 874, 1175, 1390, 2347
AsuNHI	GCTAGC	1 cut(s)	961
AvaI	CYCGRG	3 cut(s)	757, 839, 1325
AxyI	CCTNAGG	1 cut(s)	2257
BaeGI	GKGCMC	5 cut(s)	1184, 1833, 2175, 2265, 2628
BalI	TGGCCA	2 cut(s)	1472, 1623
BamHI	GGATCC	1 cut(s)	639
BanI	GGYRCC	4 cut(s)	572, 659, 802, 2231
BanII	GRGCYC	2 cut(s)	495, 2628
BauI	CACGAG	3 cut(s)	486, 1046, 1137
BbsI	GAAGAC	3 cut(s)	557, 2028, 2085
Bbv12I	GWGCWC	7 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2583
BbvCI	CCTCAGC	1 cut(s)	2456
BbvI	GCAGC	3 cut(s)	657, 1261, 2124
BccI	CCATC	7 cut(s)	742, 853, 1151, 1458, 1462, 1730, 2465
BceAI	ACGGC	7 cut(s)	21, 193, 394, 673, 1024, 1072, 2633
BcgI	CGANNNNNNTGC	2 cut(s)	2591, 2625
BciT130I	CCWGG	5 cut(s)	164, 1196, 1446, 1606, 1662
BcnI	CCSGG	6 cut(s)	350, 448, 699, 840, 841, 2350
BcoDI	GTCTC	2 cut(s)	1301, 2399
BcuI	ACTAGT	2 cut(s)	1420, 1544
BfaI	CTAG	9 cut(s)	773, 962, 1247, 1421, 1545, 1641, 1809, 2240, 2615
BfoI	RGCGCY	3 cut(s)	663, 806, 1671
BfuAI	ACCTGC	1 cut(s)	702
BglI	GCCNNNNNGGC	1 cut(s)	2336
BisI	GCNGC	8 cut(s)	576, 604, 646, 649, 1120, 1275, 2113, 2235
BlsI	GCNGC	8 cut(s)	577, 605, 647, 650, 1121, 1276, 2114, 2236
BmeRI	GACNNNNNGTC	1 cut(s)	130
BmeT110I	CYCGRG	3 cut(s)	757, 839, 1325
BmgBI	CACGTC	3 cut(s)	240, 949, 1990
BmrI	ACTGGG	2 cut(s)	491, 577
BmsI	GCATC	4 cut(s)	591, 888, 943, 1441
BmtI	GCTAGC	1 cut(s)	965
BmuI	ACTGGG	2 cut(s)	491, 577
BpiI	GAAGAC	3 cut(s)	557, 2028, 2085
BplI	GAGNNNNNCTC	2 cut(s)	1934, 1966
Bpu10I	CCTNAGC	2 cut(s)	2376, 2456
BpuEI	CTTGAG	2 cut(s)	611, 751
BpuMI	CCSGG	6 cut(s)	350, 448, 699, 840, 841, 2350
BsaBI	GATNNNNATC	1 cut(s)	1976
BsaHI	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
BsaJI	CCNNGG	9 cut(s)	334, 348, 376, 390, 456, 687, 839, 1618, 1660
BsaWI	WCCGGW	3 cut(s)	183, 522, 820
BsaXI	ACNNNNNCTCC	4 cut(s)	477, 507, 1761, 1791
Bse118I	RCCGGY	1 cut(s)	425
Bse1I	ACTGG	8 cut(s)	25, 289, 413, 497, 572, 1229, 2042, 2281
Bse21I	CCTNAGG	1 cut(s)	2257
Bse3DI	GCAATG	1 cut(s)	2693
Bse8I	GATNNNNATC	1 cut(s)	1976
BseAI	TCCGGA	1 cut(s)	183
BseBI	CCWGG	5 cut(s)	164, 1196, 1446, 1606, 1662
BseDI	CCNNGG	9 cut(s)	334, 348, 376, 390, 456, 687, 839, 1618, 1660
BseGI	GGATG	7 cut(s)	292, 864, 1162, 1432, 1469, 1473, 1722
BseJI	GATNNNNATC	1 cut(s)	1976
BseMI	GCAATG	1 cut(s)	2693
BseMII	CTCAG	6 cut(s)	1094, 1128, 2130, 2390, 2447, 2564
BseNI	ACTGG	8 cut(s)	25, 289, 413, 497, 572, 1229, 2042, 2281
BseRI	GAGGAG	2 cut(s)	1064, 1792
BseSI	GKGCMC	5 cut(s)	1184, 1833, 2175, 2265, 2628
BseXI	GCAGC	3 cut(s)	657, 1261, 2124
BseYI	CCCAGC	2 cut(s)	33, 249
BsgI	GTGCAG	2 cut(s)	1621, 1687
Bsh1236I	CGCG	3 cut(s)	515, 603, 1939
Bsh1285I	CGRYCG	1 cut(s)	443
BshNI	GGYRCC	4 cut(s)	572, 659, 802, 2231
BsiEI	CGRYCG	1 cut(s)	443
BsiHKAI	GWGCWC	7 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2583
BsiHKCI	CYCGRG	3 cut(s)	757, 839, 1325
BslFI	GGGAC	7 cut(s)	338, 371, 593, 736, 1316, 2238, 2359
BsmAI	GTCTC	2 cut(s)	1301, 2399
BsmFI	GGGAC	7 cut(s)	338, 371, 593, 736, 1316, 2238, 2359
BsmI	GAATGC	1 cut(s)	1677
BsoBI	CYCGRG	3 cut(s)	757, 839, 1325
Bsp120I	GGGCCC	1 cut(s)	2624
Bsp1286I	GDGCHC	9 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2265, 2583, 2628
Bsp13I	TCCGGA	1 cut(s)	183
Bsp19I	CCATGG	2 cut(s)	456, 1618
BspCNI	CTCAG	6 cut(s)	1093, 1127, 2129, 2389, 2448, 2565
BspEI	TCCGGA	1 cut(s)	183
BspFNI	CGCG	3 cut(s)	515, 603, 1939
BspHI	TCATGA	1 cut(s)	1536
BspMI	ACCTGC	1 cut(s)	702
BspOI	GCTAGC	1 cut(s)	965
BspPI	GGATC	7 cut(s)	77, 634, 647, 816, 1616, 2360, 2602
BspQI	GCTCTTC	2 cut(s)	2003, 2457
BspT107I	GGYRCC	4 cut(s)	572, 659, 802, 2231
BsrBI	CCGCTC	1 cut(s)	66
BsrDI	GCAATG	1 cut(s)	2693
BsrFI	RCCGGY	1 cut(s)	425
BsrI	ACTGG	8 cut(s)	25, 289, 413, 497, 572, 1229, 2042, 2281
BssAI	RCCGGY	1 cut(s)	425
BssECI	CCNNGG	9 cut(s)	334, 348, 376, 390, 456, 687, 839, 1618, 1660
BssNAI	GTATAC	2 cut(s)	1074, 1092
BssNI	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
BssSI	CACGAG	3 cut(s)	486, 1046, 1137
BssT1I	CCWWGG	3 cut(s)	390, 456, 1618
Bst1107I	GTATAC	2 cut(s)	1074, 1092
Bst2BI	CACGAG	3 cut(s)	486, 1046, 1137
Bst2UI	CCWGG	5 cut(s)	164, 1196, 1446, 1606, 1662
Bst4CI	ACNGT	5 cut(s)	415, 1887, 2208, 2503, 2546
Bst6I	CTCTTC	5 cut(s)	271, 1597, 1704, 2003, 2457
BstACI	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
BstAPI	GCANNNNNTGC	1 cut(s)	1701
BstC8I	GCNNGC	9 cut(s)	580, 963, 1296, 1693, 2306, 2328, 2337, 2620, 2624
BstDEI	CTNAG	8 cut(s)	1080, 1114, 2116, 2178, 2257, 2376, 2456, 2573
BstDSI	CCRYGG	4 cut(s)	334, 376, 456, 1618
BstF5I	GGATG	7 cut(s)	292, 864, 1162, 1432, 1469, 1473, 1722
BstFNI	CGCG	3 cut(s)	515, 603, 1939
BstH2I	RGCGCY	3 cut(s)	663, 806, 1671
BstHHI	GCGC	6 cut(s)	515, 603, 662, 805, 879, 1670
BstMAI	GTCTC	2 cut(s)	1301, 2399
BstMCI	CGRYCG	1 cut(s)	443
BstNI	CCWGG	5 cut(s)	164, 1196, 1446, 1606, 1662
BstNSI	RCATGY	3 cut(s)	784, 1178, 2622
BstSLI	GKGCMC	5 cut(s)	1184, 1833, 2175, 2265, 2628
BstUI	CGCG	3 cut(s)	515, 603, 1939
BstV1I	GCAGC	3 cut(s)	657, 1261, 2124
BstV2I	GAAGAC	3 cut(s)	557, 2028, 2085
BstX2I	RGATCY	1 cut(s)	639
BstXI	CCANNNNNNTGG	1 cut(s)	1664
BstYI	RGATCY	1 cut(s)	639
BstZ17I	GTATAC	2 cut(s)	1074, 1092
Bsu36I	CCTNAGG	1 cut(s)	2257
BtgI	CCRYGG	4 cut(s)	334, 376, 456, 1618
BtgZI	GCGATG	1 cut(s)	761
BtrI	CACGTC	3 cut(s)	240, 949, 1990
BtsCI	GGATG	7 cut(s)	292, 864, 1162, 1432, 1469, 1473, 1722
BtsI	GCAGTG	2 cut(s)	1296, 2219
BtsIMutI	CAGTG	8 cut(s)	282, 1296, 1695, 1860, 2049, 2219, 2274, 2551
BveI	ACCTGC	1 cut(s)	702
Cac8I	GCNNGC	9 cut(s)	580, 963, 1296, 1693, 2306, 2328, 2337, 2620, 2624
CciI	TCATGA	1 cut(s)	1536
CfoI	GCGC	6 cut(s)	515, 603, 662, 805, 879, 1670
Cfr10I	RCCGGY	1 cut(s)	425
Cfr9I	CCCGGG	1 cut(s)	839
CseI	GACGC	4 cut(s)	145, 245, 595, 1727
Csp6I	GTAC	7 cut(s)	718, 824, 985, 1213, 1561, 2134, 2272
CviQI	GTAC	7 cut(s)	718, 824, 985, 1213, 1561, 2134, 2272
DdeI	CTNAG	8 cut(s)	1080, 1114, 2116, 2178, 2257, 2376, 2456, 2573
DinI	GGCGCC	2 cut(s)	661, 804
DraIII	CACNNNGTG	2 cut(s)	382, 1990
DrdI	GACNNNNNNGTC	3 cut(s)	155, 158, 467
DriI	GACNNNNNGTC	1 cut(s)	130
DseDI	GACNNNNNNGTC	3 cut(s)	155, 158, 467
EaeI	YGGCCR	2 cut(s)	1470, 1621
Eam1104I	CTCTTC	5 cut(s)	271, 1597, 1704, 2003, 2457
Eam1105I	GACNNNNNGTC	1 cut(s)	130
EarI	CTCTTC	5 cut(s)	271, 1597, 1704, 2003, 2457
EciI	GGCGGA	3 cut(s)	266, 425, 1476
Ecl136II	GAGCTC	1 cut(s)	493
Eco130I	CCWWGG	3 cut(s)	390, 456, 1618
Eco24I	GRGCYC	2 cut(s)	495, 2628
Eco53kI	GAGCTC	1 cut(s)	493
Eco57I	CTGAAG	3 cut(s)	993, 1984, 2001
Eco81I	CCTNAGG	1 cut(s)	2257
Eco88I	CYCGRG	3 cut(s)	757, 839, 1325
EcoICRI	GAGCTC	1 cut(s)	493
EcoO109I	RGGNCCY	4 cut(s)	691, 2252, 2392, 2625
EcoRI	GAATTC	1 cut(s)	476
EcoRII	CCWGG	5 cut(s)	162, 1194, 1444, 1604, 1660
EcoT14I	CCWWGG	3 cut(s)	390, 456, 1618
EcoT38I	GRGCYC	2 cut(s)	495, 2628
EgeI	GGCGCC	2 cut(s)	661, 804
EheI	GGCGCC	2 cut(s)	661, 804
ErhI	CCWWGG	3 cut(s)	390, 456, 1618
FalI	AAGNNNNNCTT	6 cut(s)	2070, 2102, 2144, 2176, 2240, 2272
FaqI	GGGAC	7 cut(s)	338, 371, 593, 736, 1316, 2238, 2359
FauI	CCCGC	6 cut(s)	51, 329, 508, 629, 1115, 2615
FblI	GTMKAC	3 cut(s)	1073, 1091, 1629
Fnu4HI	GCNGC	8 cut(s)	576, 604, 646, 649, 1120, 1275, 2113, 2235
FokI	GGATG	7 cut(s)	279, 871, 1169, 1419, 1476, 1480, 1709
FriOI	GRGCYC	2 cut(s)	495, 2628
Fsp4HI	GCNGC	8 cut(s)	576, 604, 646, 649, 1120, 1275, 2113, 2235
FspBI	CTAG	9 cut(s)	773, 962, 1247, 1421, 1545, 1641, 1809, 2240, 2615
GlaI	GCGC	6 cut(s)	514, 602, 661, 804, 878, 1669
GluI	GCNGC	8 cut(s)	576, 604, 646, 649, 1120, 1275, 2113, 2235
GsaI	CCCAGC	2 cut(s)	37, 253
HaeII	RGCGCY	3 cut(s)	663, 806, 1671
HgaI	GACGC	4 cut(s)	145, 245, 595, 1727
HhaI	GCGC	6 cut(s)	515, 603, 662, 805, 879, 1670
Hin1I	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
Hin6I	GCGC	6 cut(s)	513, 601, 660, 803, 877, 1668
HinP1I	GCGC	6 cut(s)	513, 601, 660, 803, 877, 1668
HincII	GTYRAC	1 cut(s)	115
HindII	GTYRAC	1 cut(s)	115
HindIII	AAGCTT	2 cut(s)	2084, 2324
HphI	GGTGA	8 cut(s)	310, 337, 415, 445, 874, 1175, 1390, 2347
Hpy188III	TCNNGA	6 cut(s)	16, 184, 547, 1046, 1537, 1985
HpyAV	CCTTC	8 cut(s)	79, 118, 307, 523, 1543, 2025, 2383, 2525
HpyCH4III	ACNGT	5 cut(s)	415, 1887, 2208, 2503, 2546
HpyCH4IV	ACGT	8 cut(s)	239, 366, 669, 893, 948, 1169, 1850, 1989
HpyF3I	CTNAG	8 cut(s)	1080, 1114, 2116, 2178, 2257, 2376, 2456, 2573
HpySE526I	ACGT	8 cut(s)	239, 366, 669, 893, 948, 1169, 1850, 1989
Hsp92I	GRCGYC	5 cut(s)	606, 660, 803, 893, 1719
HspAI	GCGC	6 cut(s)	513, 601, 660, 803, 877, 1668
KasI	GGCGCC	2 cut(s)	659, 802
KflI	GGGWCCC	1 cut(s)	2252
Kpn2I	TCCGGA	1 cut(s)	183
LguI	GCTCTTC	2 cut(s)	2003, 2457
LmnI	GCTCC	6 cut(s)	71, 498, 710, 793, 942, 958
Lsp1109I	GCAGC	3 cut(s)	657, 1261, 2124
LweI	GCATC	4 cut(s)	591, 888, 943, 1441
MaeI	CTAG	9 cut(s)	773, 962, 1247, 1421, 1545, 1641, 1809, 2240, 2615
MaeII	ACGT	8 cut(s)	239, 366, 669, 893, 948, 1169, 1850, 1989
MaeIII	GTNAC	8 cut(s)	260, 499, 886, 1043, 1132, 1242, 1906, 2202
MbiI	CCGCTC	1 cut(s)	66
MfeI	CAATTG	1 cut(s)	2073
MflI	RGATCY	1 cut(s)	639
MhlI	GDGCHC	9 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2265, 2583, 2628
MlsI	TGGCCA	2 cut(s)	1472, 1623
MluNI	TGGCCA	2 cut(s)	1472, 1623
Mly113I	GGCGCC	2 cut(s)	660, 803
MlyI	GAGTC	5 cut(s)	66, 119, 1484, 1793, 2210
MmeI	TCCRAC	8 cut(s)	159, 612, 836, 876, 927, 1460, 1524, 1839
Mox20I	TGGCCA	2 cut(s)	1472, 1623
MroI	TCCGGA	1 cut(s)	183
MscI	TGGCCA	2 cut(s)	1472, 1623
MseI	TTAA	5 cut(s)	179, 1005, 1511, 1578, 2640
MslI	CAYNNNNRTG	7 cut(s)	951, 1139, 1352, 1623, 1662, 2060, 2617
Msp20I	TGGCCA	2 cut(s)	1472, 1623
MspA1I	CMGCKG	2 cut(s)	249, 578
MunI	CAATTG	1 cut(s)	2073
Mva1269I	GAATGC	1 cut(s)	1677
MvaI	CCWGG	5 cut(s)	164, 1196, 1446, 1606, 1662
MvnI	CGCG	3 cut(s)	515, 603, 1939
NarI	GGCGCC	2 cut(s)	660, 803
NciI	CCSGG	6 cut(s)	350, 448, 699, 840, 841, 2350
NcoI	CCATGG	2 cut(s)	456, 1618
NheI	GCTAGC	1 cut(s)	961
NmeAIII	GCCGAG	1 cut(s)	712
NmuCI	GTSAC	4 cut(s)	1043, 1132, 1242, 2202
NspI	RCATGY	3 cut(s)	784, 1178, 2622
OliI	CACNNNNGTG	2 cut(s)	1139, 1662
PaeI	GCATGC	1 cut(s)	2622
PaeR7I	CTCGAG	1 cut(s)	757
PagI	TCATGA	1 cut(s)	1536
PciSI	GCTCTTC	2 cut(s)	2003, 2457
PcsI	WCGNNNNNNNCGW	2 cut(s)	147, 156
PctI	GAATGC	1 cut(s)	1677
PfeI	GAWTC	6 cut(s)	339, 538, 899, 1496, 2196, 2553
PflFI	GACNNNGTC	1 cut(s)	155
PflMI	CCANNNNNTGG	2 cut(s)	382, 2032
PfoI	TCCNGGA	1 cut(s)	162
PkrI	GCNGC	8 cut(s)	577, 605, 647, 650, 1121, 1276, 2114, 2236
PleI	GAGTC	5 cut(s)	65, 119, 1484, 1793, 2210
PluTI	GGCGCC	2 cut(s)	663, 806
PpsI	GAGTC	5 cut(s)	65, 119, 1484, 1793, 2210
PpuMI	RGGWCCY	3 cut(s)	691, 2252, 2392
PsiI	TTATAA	1 cut(s)	1031
Psp124BI	GAGCTC	1 cut(s)	495
Psp5II	RGGWCCY	3 cut(s)	691, 2252, 2392
Psp6I	CCWGG	5 cut(s)	162, 1194, 1444, 1604, 1660
PspFI	CCCAGC	2 cut(s)	33, 249
PspGI	CCWGG	5 cut(s)	162, 1194, 1444, 1604, 1660
PspOMI	GGGCCC	1 cut(s)	2624
PspPPI	RGGWCCY	3 cut(s)	691, 2252, 2392
PspXI	VCTCGAGB	1 cut(s)	757
PsuI	RGATCY	1 cut(s)	639
PsyI	GACNNNGTC	1 cut(s)	155
PvuII	CAGCTG	1 cut(s)	249
RsaI	GTAC	7 cut(s)	719, 825, 986, 1214, 1562, 2135, 2273
RsaNI	GTAC	7 cut(s)	718, 824, 985, 1213, 1561, 2134, 2272
RseI	CAYNNNNRTG	7 cut(s)	951, 1139, 1352, 1623, 1662, 2060, 2617
SacI	GAGCTC	1 cut(s)	495
SapI	GCTCTTC	2 cut(s)	2003, 2457
SaqAI	TTAA	5 cut(s)	179, 1005, 1511, 1578, 2640
SatI	GCNGC	8 cut(s)	576, 604, 646, 649, 1120, 1275, 2113, 2235
SchI	GAGTC	5 cut(s)	66, 119, 1484, 1793, 2210
SduI	GDGCHC	9 cut(s)	495, 939, 1184, 1263, 1833, 2175, 2265, 2583, 2628
SfaNI	GCATC	4 cut(s)	591, 888, 943, 1441
SfoI	GGCGCC	2 cut(s)	661, 804
Sfr274I	CTCGAG	1 cut(s)	757
SlaI	CTCGAG	1 cut(s)	757
SmaI	CCCGGG	1 cut(s)	841
SmiMI	CAYNNNNRTG	7 cut(s)	951, 1139, 1352, 1623, 1662, 2060, 2617
SmlI	CTYRAG	3 cut(s)	626, 730, 757
SmoI	CTYRAG	3 cut(s)	626, 730, 757
SpeI	ACTAGT	2 cut(s)	1420, 1544
SphI	GCATGC	1 cut(s)	2622
SspDI	GGCGCC	2 cut(s)	659, 802
SspMI	CTAG	9 cut(s)	773, 962, 1247, 1421, 1545, 1641, 1809, 2240, 2615
SstI	GAGCTC	1 cut(s)	495
StyI	CCWWGG	3 cut(s)	390, 456, 1618
TaaI	ACNGT	5 cut(s)	415, 1887, 2208, 2503, 2546
TaiI	ACGT	8 cut(s)	242, 369, 672, 896, 951, 1172, 1853, 1992
TaqI	TCGA	8 cut(s)	15, 212, 758, 931, 951, 1263, 1976, 2597
TaqII	GACCGA	1 cut(s)	457
TatI	WGTACW	2 cut(s)	1560, 2271
TauI	GCSGC	5 cut(s)	578, 606, 651, 1122, 2237
TfiI	GAWTC	6 cut(s)	339, 538, 899, 1496, 2196, 2553
Tru1I	TTAA	5 cut(s)	179, 1005, 1511, 1578, 2640
Tru9I	TTAA	5 cut(s)	179, 1005, 1511, 1578, 2640
TscAI	CASTG	8 cut(s)	289, 1296, 1702, 1860, 2049, 2226, 2281, 2551
TseFI	GTSAC	4 cut(s)	1043, 1132, 1242, 2202
TseI	GCWGC	3 cut(s)	645, 1274, 2112
Tsp45I	GTSAC	4 cut(s)	1043, 1132, 1242, 2202
TspGWI	ACGGA	8 cut(s)	69, 188, 351, 461, 1015, 1816, 2453, 2576
TspMI	CCCGGG	1 cut(s)	839
TspRI	CASTG	8 cut(s)	289, 1296, 1702, 1860, 2049, 2226, 2281, 2551
Tth111I	GACNNNGTC	1 cut(s)	155
Van91I	CCANNNNNTGG	2 cut(s)	382, 2032
VneI	GTGCAC	3 cut(s)	1180, 1829, 2171
XapI	RAATTY	3 cut(s)	476, 2659, 2689
XceI	RCATGY	3 cut(s)	784, 1178, 2622
XhoI	CTCGAG	1 cut(s)	757
XmaI	CCCGGG	1 cut(s)	839
XmiI	GTMKAC	3 cut(s)	1073, 1091, 1629
XspI	CTAG	9 cut(s)	773, 962, 1247, 1421, 1545, 1641, 1809, 2240, 2615
ZraI	GACGTC	1 cut(s)	894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.