Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0003035

Physical Location & Seq

Genomic Coordinates Reverse (-)

20975564 .. 20981363

Gene Structure 5800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGTTTCAGTCTCTTCTTCGATATAGATTCAGCAGCACAACCCCTTCATCTCTCAAACGAATAATCACCGCAGTCCCCAATGTCTACAAAACCCGCGCACTCTCACTCCTCCCCCCTAAACAACATCTGCAGCAGCGGCGGCGGTGCCACAACTGGGAGGGCACGCTTGGAGGCGGAGGCGGAGGAGGAGGAGGGAGTGGAGAGTACGATCACATTAGGGCCGAAGTCAACTGTCCCCGGTGCTCCAAACAAATGGCGGTGCTCTTCTCCACCCGACCCCTCTCCATCACCAGCCGAGAGACGGGGCTCTACCAGGCCGTCAATCTCTGCCCCAATTGCAGGACCGCCTTCTACTTCAGGCCCTTGAAGCTCGTCCCTCTACACGGCACTTTCGTGGAGATTGGTCGCCTTAAAGACTTAAAGCCCCCCACCAATTCCTTCGACGCAAAAACAGAGCCATGCGCTGTTGATGATGAAACGCCCTCGTCTTCTCCGCCCAGGGACTTGCCCACCCCCAAGTTCATCTGTAAGGCGCTTGATGAATTTGTTATCGGCCAACAAAGAGCCAAAAAGGTGCTTTCCGTTGCAGTTTACAACCACTATAAAAGGATACATCATGCTTCCCCAAAGACTATGAGGTCTGGTGCAGAATCAGTTGATTATAAACTTGAAGGTGTACATGACAGTGACTCTGTTGAACTGGAGAAGAGCAATGTATTACTGATGGGTCCCACTGGTTCAGGGAAGACGTTACTTGCAAAAACACTAGCTCGTGTTGTCAATGTGCCGTTTGCCATTGCTGATGCAACAACATTAACACAGGCAAGTTATGTTGGAGAAGATGTGGAATCGATATTGTATAGACTGCTTATGGTTGAGAGCTTGAGCAGAGATGTATCGGGGGAGGGTGTCCAACAGGCATTGCTGAAAATGTTAGAAGGAACCGTAGTTAGCGTTTCTGATAAAGGAGCTCGGAAGCATTCTCGTGATGATAGCATCCAGATGGATACAAAAAATATCCTTTTCATATGTGGTGGGGCATTTGTTGGTTTGGAGAAGACCATTTCAGAAAGACTCCAAGATTCTTCCATTGGATTTGGAGTACCAGTTCGTGCAAACATGAGGACCAGTGGCTTGACTGATGCCATAGTGACGTCATCTTTGTTGGAATATGTAGAAAGTGGAGATCTTATTGCGTACGGCCTGATACCTGAATTTGTTGGCCGCTTTCCTGTTTTAGCTAGTTTGTCATCTTTAGATGAGGACCAACTTGTTCAGGTACTCACAGAACCTAAAAATGCTCTCGGTAAACAATATAAGAAGATGTTTAACATGAACAATGTCCAATTACATTTTACTGATAATGCATTGAGATTGATCGCAAAGAAGGCAATGGCAAAGAACGCTGGGGCTCGAGGTTTGAGAGCAATATTGGAAAATATTCTAACAGATGCAATGTTTGAGGTTCCAGACATGAAGACGGAAGCCAATAGTGCATATGCAGTTTTGGTGGATGAAGAAGCTGTTGGGTCAGAGGACACTTGTGGACTTGGAGCTAAAATTCTTAGTGGGGATGGTGCATTGGAGAAATTTCTTCGGGAAACAAAGTCAGGAGAATGCATGGGAAAGCGCGGGTTGGATGGAGATGAGTGTTTACGAGAAGTCTTAGATGTTCAATCAAGAGCCACGGCGCAGGGCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA_2 ClpB_D2-small

Protein Analysis

568

Amino Acids

61.8

Weight (kDa)

8.17

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	239 - 286	1.4e-06	ATPase family associated with various cellular activities (AAA)
AAA_2	PF07724	302 - 412	1.4e-10	AAA domain (Cdc48 subfamily)
ClpB_D2-small	PF10431	419 - 488	1.8e-10	C-terminal, D2-small domain, of ClpB protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003035)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49840 AT5G49840 AT5G49840 AT5G49840
fragaria_vesca	FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740
malus_domestica	MD08G1248400.v1.1
prunus_persica	Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1
pyrus_communis	pycom08g21520
rosa_chinensis	RchiOBHm_Chr7g0219511
rosa_laevigata	RLG00000002286
rosa_multiflora	Rmu_sc0003047.1_g000013
rosa_roxburghii	Rroxscaffold_3G00240000
rosa_rugosa	Rorug07G0185800 Rorug07G0185900
rosa_samantha	Rh7AG328400 Rh7BG318900 Rh7CG345800 Rh7DG324800
rosa_wichuraiana	Rw7G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	663
AasI	GACNNNNNNGTC	1 cut(s)	637
AatII	GACGTC	1 cut(s)	1157
AccB1I	GGYRCC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	84
AccII	CGCG	2 cut(s)	96, 1632
AcoI	YGGCCR	2 cut(s)	553, 1222
AcsI	RAATTY	4 cut(s)	542, 1214, 1560, 1589
AcuI	CTGAAG	1 cut(s)	340
AcyI	GRCGYC	1 cut(s)	1154
AfaI	GTAC	5 cut(s)	206, 678, 1104, 1199, 1281
AfiI	CCNNNNNNNGG	4 cut(s)	154, 301, 339, 383
AgsI	TTSAA	4 cut(s)	367, 671, 698, 1676
AjnI	CCWGG	2 cut(s)	312, 497
AjuI	GAANNNNNNNTTGG	2 cut(s)	1509, 1541
AleI	CACNNNNGTG	1 cut(s)	392
AloI	GAACNNNNNNTCC	2 cut(s)	1092, 1124
AluBI	AGCT	7 cut(s)	370, 770, 882, 971, 1241, 1523, 1556
AluI	AGCT	7 cut(s)	370, 770, 882, 971, 1241, 1523, 1556
Alw21I	GWGCWC	3 cut(s)	245, 264, 973
Alw26I	GTCTC	2 cut(s)	15, 293
Ama87I	CYCGRG	1 cut(s)	1413
AoxI	GGCC	6 cut(s)	219, 315, 359, 553, 1201, 1222
ApeKI	GCWGC	3 cut(s)	33, 130, 133
ApoI	RAATTY	4 cut(s)	542, 1214, 1560, 1589
ArsI	GACNNNNNNTTYG	2 cut(s)	1144, 1176
Asp700I	GAANNNNTTC	1 cut(s)	1440
AspLEI	GCGC	5 cut(s)	98, 464, 535, 1632, 1693
AspS9I	GGNCC	6 cut(s)	219, 342, 360, 728, 1125, 1264
AsuC2I	CCSGG	1 cut(s)	238
AsuHPI	GGTGA	2 cut(s)	58, 280
AvaI	CYCGRG	1 cut(s)	1413
AvaII	GGWCC	4 cut(s)	342, 728, 1125, 1264
BaeGI	GKGCMC	1 cut(s)	164
BanI	GGYRCC	1 cut(s)	144
BanII	GRGCYC	3 cut(s)	309, 973, 1414
BauI	CACGAG	2 cut(s)	771, 984
BbsI	GAAGAC	4 cut(s)	480, 752, 1064, 1484
Bbv12I	GWGCWC	3 cut(s)	245, 264, 973
BbvI	GCAGC	3 cut(s)	45, 142, 145
BccI	CCATC	5 cut(s)	293, 718, 997, 1568, 1634
BceAI	ACGGC	4 cut(s)	302, 400, 772, 1216
BciT130I	CCWGG	2 cut(s)	314, 499
BciVI	GTATCC	2 cut(s)	603, 1000
BcnI	CCSGG	1 cut(s)	238
BcoDI	GTCTC	2 cut(s)	15, 293
BfaI	CTAG	2 cut(s)	767, 1242
BfmI	CTRYAG	1 cut(s)	128
BfoI	RGCGCY	1 cut(s)	536
BfuI	GTATCC	2 cut(s)	603, 1000
BglII	AGATCT	1 cut(s)	1186
BisI	GCNGC	6 cut(s)	34, 131, 134, 137, 140, 1225
BlsI	GCNGC	6 cut(s)	35, 132, 135, 138, 141, 1226
Bme1390I	CCNGG	3 cut(s)	238, 314, 499
Bme18I	GGWCC	4 cut(s)	342, 728, 1125, 1264
BmeT110I	CYCGRG	1 cut(s)	1413
BmgT120I	GGNCC	6 cut(s)	219, 342, 360, 728, 1125, 1264
BmiI	GGNNCC	5 cut(s)	146, 729, 730, 943, 1467
BmrFI	CCNGG	3 cut(s)	238, 314, 499
BmrI	ACTGGG	1 cut(s)	163
BmsI	GCATC	4 cut(s)	793, 1005, 1132, 1441
BmuI	ACTGGG	1 cut(s)	163
BpiI	GAAGAC	4 cut(s)	480, 752, 1064, 1484
BpmI	CTGGAG	1 cut(s)	722
BpuEI	CTTGAG	1 cut(s)	904
BpuMI	CCSGG	1 cut(s)	238
Bsa29I	ATCGAT	1 cut(s)	851
BsaHI	GRCGYC	1 cut(s)	1154
BsaJI	CCNNGG	4 cut(s)	236, 497, 498, 1686
BsaXI	ACNNNNNCTCC	6 cut(s)	90, 120, 828, 858, 1092, 1122
Bsc4I	CCNNNNNNNGG	4 cut(s)	154, 301, 339, 383
Bse1I	ACTGG	5 cut(s)	158, 705, 739, 1106, 1128
Bse3DI	GCAATG	5 cut(s)	718, 795, 920, 1398, 1461
BseBI	CCWGG	2 cut(s)	314, 499
BseCI	ATCGAT	1 cut(s)	851
BseDI	CCNNGG	4 cut(s)	236, 497, 498, 1686
BseGI	GGATG	4 cut(s)	996, 1519, 1579, 1645
BseLI	CCNNNNNNNGG	4 cut(s)	154, 301, 339, 383
BseMI	GCAATG	5 cut(s)	718, 795, 920, 1398, 1461
BseNI	ACTGG	5 cut(s)	158, 705, 739, 1106, 1128
BseRI	GAGGAG	4 cut(s)	98, 198, 201, 204
BseSI	GKGCMC	1 cut(s)	164
BseXI	GCAGC	3 cut(s)	45, 142, 145
BseYI	CCCAGC	1 cut(s)	1406
BsgI	GTGCAG	1 cut(s)	666
Bsh1236I	CGCG	2 cut(s)	96, 1632
BshFI	GGCC	6 cut(s)	221, 317, 361, 555, 1203, 1224
BshNI	GGYRCC	1 cut(s)	144
BshVI	ATCGAT	1 cut(s)	851
BsiHKAI	GWGCWC	3 cut(s)	245, 264, 973
BsiHKCI	CYCGRG	1 cut(s)	1413
BsiSI	CCGG	1 cut(s)	238
BsiWI	CGTACG	1 cut(s)	1197
BslFI	GGGAC	5 cut(s)	59, 219, 359, 515, 714
BslI	CCNNNNNNNGG	4 cut(s)	154, 301, 339, 383
BsmAI	GTCTC	2 cut(s)	15, 293
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	5 cut(s)	59, 219, 359, 515, 714
BsmI	GAATGC	2 cut(s)	979, 1622
BsnI	GGCC	6 cut(s)	221, 317, 361, 555, 1203, 1224
BsoBI	CYCGRG	1 cut(s)	1413
Bsp1286I	GDGCHC	6 cut(s)	164, 245, 264, 309, 973, 1414
Bsp1407I	TGTACA	1 cut(s)	676
Bsp143I	GATC	3 cut(s)	208, 1186, 1377
BspANI	GGCC	6 cut(s)	221, 317, 361, 555, 1203, 1224
BspDI	ATCGAT	1 cut(s)	851
BspFNI	CGCG	2 cut(s)	96, 1632
BspLI	GGNNCC	5 cut(s)	146, 729, 730, 943, 1467
BspMAI	CTGCAG	1 cut(s)	132
BspQI	GCTCTTC	2 cut(s)	269, 701
BspT107I	GGYRCC	1 cut(s)	144
BsrDI	GCAATG	5 cut(s)	718, 795, 920, 1398, 1461
BsrGI	TGTACA	1 cut(s)	676
BsrI	ACTGG	5 cut(s)	158, 705, 739, 1106, 1128
BssECI	CCNNGG	4 cut(s)	236, 497, 498, 1686
BssMI	GATC	3 cut(s)	208, 1186, 1377
BssNI	GRCGYC	1 cut(s)	1154
BssSI	CACGAG	2 cut(s)	771, 984
Bst2BI	CACGAG	2 cut(s)	771, 984
Bst2UI	CCWGG	2 cut(s)	314, 499
Bst4CI	ACNGT	3 cut(s)	233, 686, 946
Bst6I	CTCTTC	3 cut(s)	18, 269, 701
BstACI	GRCGYC	1 cut(s)	1154
BstAUI	TGTACA	1 cut(s)	676
BstC8I	GCNNGC	1 cut(s)	164
BstDEI	CTNAG	2 cut(s)	1565, 1666
BstDSI	CCRYGG	1 cut(s)	1686
BstF5I	GGATG	4 cut(s)	996, 1519, 1579, 1645
BstFNI	CGCG	2 cut(s)	96, 1632
BstH2I	RGCGCY	1 cut(s)	536
BstHHI	GCGC	5 cut(s)	98, 464, 535, 1632, 1693
BstKTI	GATC	3 cut(s)	211, 1189, 1380
BstMAI	GTCTC	2 cut(s)	15, 293
BstMBI	GATC	3 cut(s)	208, 1186, 1377
BstMWI	GCNNNNNNNGC	7 cut(s)	136, 139, 336, 367, 1388, 1403, 1493
BstNI	CCWGG	2 cut(s)	314, 499
BstSCI	CCNGG	3 cut(s)	236, 312, 497
BstSFI	CTRYAG	1 cut(s)	128
BstSLI	GKGCMC	1 cut(s)	164
BstUI	CGCG	2 cut(s)	96, 1632
BstV1I	GCAGC	3 cut(s)	45, 142, 145
BstV2I	GAAGAC	4 cut(s)	480, 752, 1064, 1484
BstX2I	RGATCY	1 cut(s)	1186
BstXI	CCANNNNNNTGG	1 cut(s)	253
BstYI	RGATCY	1 cut(s)	1186
Bsu15I	ATCGAT	1 cut(s)	851
BsuI	GTATCC	2 cut(s)	603, 1000
BsuRI	GGCC	6 cut(s)	221, 317, 361, 555, 1203, 1224
BsuTUI	ATCGAT	1 cut(s)	851
BtgI	CCRYGG	1 cut(s)	1686
BtsCI	GGATG	4 cut(s)	996, 1519, 1579, 1645
BtsIMutI	CAGTG	3 cut(s)	691, 732, 1135
Cac8I	GCNNGC	1 cut(s)	164
CfoI	GCGC	5 cut(s)	98, 464, 535, 1632, 1693
Cfr13I	GGNCC	6 cut(s)	219, 342, 360, 728, 1125, 1264
ClaI	ATCGAT	1 cut(s)	851
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	5 cut(s)	205, 677, 1103, 1198, 1280
CviAII	CATG	7 cut(s)	459, 617, 680, 1120, 1333, 1474, 1621
CviQI	GTAC	5 cut(s)	205, 677, 1103, 1198, 1280
DdeI	CTNAG	2 cut(s)	1565, 1666
DpnI	GATC	3 cut(s)	210, 1188, 1379
DpnII	GATC	3 cut(s)	208, 1186, 1377
DrdI	GACNNNNNNGTC	1 cut(s)	637
DseDI	GACNNNNNNGTC	1 cut(s)	637
EaeI	YGGCCR	2 cut(s)	553, 1222
Eam1104I	CTCTTC	3 cut(s)	18, 269, 701
EarI	CTCTTC	3 cut(s)	18, 269, 701
EciI	GGCGGA	3 cut(s)	189, 195, 483
Ecl136II	GAGCTC	1 cut(s)	971
Eco24I	GRGCYC	3 cut(s)	309, 973, 1414
Eco47I	GGWCC	4 cut(s)	342, 728, 1125, 1264
Eco53kI	GAGCTC	1 cut(s)	971
Eco57I	CTGAAG	1 cut(s)	340
Eco88I	CYCGRG	1 cut(s)	1413
EcoICRI	GAGCTC	1 cut(s)	971
EcoO109I	RGGNCCY	2 cut(s)	360, 728
EcoRII	CCWGG	2 cut(s)	312, 497
EcoT22I	ATGCAT	2 cut(s)	1369, 1622
EcoT38I	GRGCYC	3 cut(s)	309, 973, 1414
Esp3I	CGTCTC	1 cut(s)	293
FaeI	CATG	7 cut(s)	462, 620, 683, 1123, 1336, 1477, 1624
FaqI	GGGAC	5 cut(s)	59, 219, 359, 515, 714
FatI	CATG	7 cut(s)	458, 616, 679, 1119, 1332, 1473, 1620
FauI	CCCGC	2 cut(s)	101, 1625
FauNDI	CATATG	2 cut(s)	1028, 1498
FblI	GTMKAC	1 cut(s)	84
Fnu4HI	GCNGC	6 cut(s)	34, 131, 134, 137, 140, 1225
FokI	GGATG	4 cut(s)	983, 1526, 1586, 1652
FriOI	GRGCYC	3 cut(s)	309, 973, 1414
Fsp4HI	GCNGC	6 cut(s)	34, 131, 134, 137, 140, 1225
FspBI	CTAG	2 cut(s)	767, 1242
GlaI	GCGC	5 cut(s)	97, 463, 534, 1631, 1692
GluI	GCNGC	6 cut(s)	34, 131, 134, 137, 140, 1225
GsaI	CCCAGC	1 cut(s)	1410
GsuI	CTGGAG	1 cut(s)	722
HaeII	RGCGCY	1 cut(s)	536
HaeIII	GGCC	6 cut(s)	221, 317, 361, 555, 1203, 1224
HapII	CCGG	1 cut(s)	238
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	5 cut(s)	98, 464, 535, 1632, 1693
Hin1I	GRCGYC	1 cut(s)	1154
Hin1II	CATG	7 cut(s)	462, 620, 683, 1123, 1336, 1477, 1624
Hin6I	GCGC	5 cut(s)	96, 462, 533, 1630, 1691
HinP1I	GCGC	5 cut(s)	96, 462, 533, 1630, 1691
HincII	GTYRAC	1 cut(s)	229
HindII	GTYRAC	1 cut(s)	229
HinfI	GANTC	6 cut(s)	27, 650, 689, 848, 1074, 1082
HpaII	CCGG	1 cut(s)	238
HphI	GGTGA	2 cut(s)	58, 280
Hpy166II	GTNNAC	7 cut(s)	85, 229, 592, 677, 1310, 1547, 1655
Hpy188I	TCNGA	4 cut(s)	961, 975, 1069, 1534
Hpy188III	TCNNGA	6 cut(s)	986, 1000, 1469, 1598, 1611, 1680
Hpy8I	GTNNAC	7 cut(s)	85, 229, 592, 677, 1310, 1547, 1655
Hpy99I	CGWCG	1 cut(s)	446
HpyAV	CCTTC	6 cut(s)	54, 358, 448, 665, 932, 1381
HpyCH4III	ACNGT	3 cut(s)	233, 686, 946
HpyCH4IV	ACGT	2 cut(s)	749, 1154
HpyF10VI	GCNNNNNNNGC	7 cut(s)	136, 139, 336, 367, 1388, 1403, 1493
HpyF3I	CTNAG	2 cut(s)	1565, 1666
HpySE526I	ACGT	2 cut(s)	749, 1154
Hsp92I	GRCGYC	1 cut(s)	1154
Hsp92II	CATG	7 cut(s)	462, 620, 683, 1123, 1336, 1477, 1624
HspAI	GCGC	5 cut(s)	96, 462, 533, 1630, 1691
KflI	GGGWCCC	1 cut(s)	728
Kzo9I	GATC	3 cut(s)	208, 1186, 1377
LguI	GCTCTTC	2 cut(s)	269, 701
LmnI	GCTCC	3 cut(s)	248, 968, 1553
Lsp1109I	GCAGC	3 cut(s)	45, 142, 145
LweI	GCATC	4 cut(s)	793, 1005, 1132, 1441
MaeI	CTAG	2 cut(s)	767, 1242
MaeII	ACGT	2 cut(s)	749, 1154
MaeIII	GTNAC	3 cut(s)	686, 750, 1150
MalI	GATC	3 cut(s)	210, 1188, 1379
MboI	GATC	3 cut(s)	208, 1186, 1377
MfeI	CAATTG	1 cut(s)	334
MflI	RGATCY	1 cut(s)	1186
MhlI	GDGCHC	6 cut(s)	164, 245, 264, 309, 973, 1414
MluCI	AATT	7 cut(s)	334, 433, 542, 1214, 1346, 1560, 1589
MlyI	GAGTC	2 cut(s)	683, 1068
MmeI	TCCRAC	4 cut(s)	814, 937, 1146, 1617
Mph1103I	ATGCAT	2 cut(s)	1369, 1622
MroXI	GAANNNNTTC	1 cut(s)	1440
MseI	TTAA	4 cut(s)	411, 419, 815, 1329
MslI	CAYNNNNRTG	4 cut(s)	392, 684, 984, 1001
MspA1I	CMGCKG	1 cut(s)	136
MspI	CCGG	1 cut(s)	238
MspR9I	CCNGG	3 cut(s)	238, 314, 499
MunI	CAATTG	1 cut(s)	334
Mva1269I	GAATGC	2 cut(s)	979, 1622
MvaI	CCWGG	2 cut(s)	314, 499
MvnI	CGCG	2 cut(s)	96, 1632
MwoI	GCNNNNNNNGC	7 cut(s)	136, 139, 336, 367, 1388, 1403, 1493
NciI	CCSGG	1 cut(s)	238
NdeI	CATATG	2 cut(s)	1028, 1498
NdeII	GATC	3 cut(s)	208, 1186, 1377
NlaIII	CATG	7 cut(s)	462, 620, 683, 1123, 1336, 1477, 1624
NlaIV	GGNNCC	5 cut(s)	146, 729, 730, 943, 1467
NmeAIII	GCCGAG	1 cut(s)	320
NmuCI	GTSAC	2 cut(s)	686, 1150
NsiI	ATGCAT	2 cut(s)	1369, 1622
OliI	CACNNNNGTG	1 cut(s)	392
PaeR7I	CTCGAG	1 cut(s)	1413
PasI	CCCWGGG	1 cut(s)	498
PciSI	GCTCTTC	2 cut(s)	269, 701
PcsI	WCGNNNNNNNCGW	1 cut(s)	390
PctI	GAATGC	2 cut(s)	979, 1622
PdmI	GAANNNNTTC	1 cut(s)	1440
PfeI	GAWTC	4 cut(s)	27, 650, 848, 1082
Pfl23II	CGTACG	1 cut(s)	1197
PkrI	GCNGC	6 cut(s)	35, 132, 135, 138, 141, 1226
PleI	GAGTC	2 cut(s)	683, 1068
PpsI	GAGTC	2 cut(s)	683, 1068
PpuMI	RGGWCCY	1 cut(s)	728
PsiI	TTATAA	1 cut(s)	663
Psp124BI	GAGCTC	1 cut(s)	973
Psp5II	RGGWCCY	1 cut(s)	728
Psp6I	CCWGG	2 cut(s)	312, 497
PspFI	CCCAGC	1 cut(s)	1406
PspGI	CCWGG	2 cut(s)	312, 497
PspLI	CGTACG	1 cut(s)	1197
PspN4I	GGNNCC	5 cut(s)	146, 729, 730, 943, 1467
PspPI	GGNCC	6 cut(s)	219, 342, 360, 728, 1125, 1264
PspPPI	RGGWCCY	1 cut(s)	728
PspXI	VCTCGAGB	1 cut(s)	1413
PstI	CTGCAG	1 cut(s)	132
PsuI	RGATCY	1 cut(s)	1186
RsaI	GTAC	5 cut(s)	206, 678, 1104, 1199, 1281
RsaNI	GTAC	5 cut(s)	205, 677, 1103, 1198, 1280
RseI	CAYNNNNRTG	4 cut(s)	392, 684, 984, 1001
SacI	GAGCTC	1 cut(s)	973
SapI	GCTCTTC	2 cut(s)	269, 701
SaqAI	TTAA	4 cut(s)	411, 419, 815, 1329
SatI	GCNGC	6 cut(s)	34, 131, 134, 137, 140, 1225
Sau3AI	GATC	3 cut(s)	208, 1186, 1377
Sau96I	GGNCC	6 cut(s)	219, 342, 360, 728, 1125, 1264
SchI	GAGTC	2 cut(s)	683, 1068
ScrFI	CCNGG	3 cut(s)	238, 314, 499
SduI	GDGCHC	6 cut(s)	164, 245, 264, 309, 973, 1414
SfaNI	GCATC	4 cut(s)	793, 1005, 1132, 1441
SfcI	CTRYAG	1 cut(s)	128
Sfr274I	CTCGAG	1 cut(s)	1413
SinI	GGWCC	4 cut(s)	342, 728, 1125, 1264
SlaI	CTCGAG	1 cut(s)	1413
SmiMI	CAYNNNNRTG	4 cut(s)	392, 684, 984, 1001
SmlI	CTYRAG	2 cut(s)	883, 1413
SmoI	CTYRAG	2 cut(s)	883, 1413
Sse9I	AATT	7 cut(s)	334, 433, 542, 1214, 1346, 1560, 1589
SspI	AATATT	2 cut(s)	1431, 1441
SspMI	CTAG	2 cut(s)	767, 1242
SstI	GAGCTC	1 cut(s)	973
StyD4I	CCNGG	3 cut(s)	236, 312, 497
TaaI	ACNGT	3 cut(s)	233, 686, 946
TaiI	ACGT	2 cut(s)	752, 1157
TaqI	TCGA	4 cut(s)	19, 441, 851, 1414
TasI	AATT	7 cut(s)	334, 433, 542, 1214, 1346, 1560, 1589
TatI	WGTACW	1 cut(s)	676
TauI	GCSGC	3 cut(s)	139, 142, 1227
TfiI	GAWTC	4 cut(s)	27, 650, 848, 1082
Tru1I	TTAA	4 cut(s)	411, 419, 815, 1329
Tru9I	TTAA	4 cut(s)	411, 419, 815, 1329
TscAI	CASTG	3 cut(s)	691, 739, 1135
TseFI	GTSAC	2 cut(s)	686, 1150
TseI	GCWGC	3 cut(s)	33, 130, 133
Tsp45I	GTSAC	2 cut(s)	686, 1150
TspDTI	ATGAA	8 cut(s)	36, 489, 511, 555, 1015, 1349, 1490, 1530
TspGWI	ACGGA	2 cut(s)	571, 1496
TspRI	CASTG	3 cut(s)	691, 739, 1135
VpaK11BI	GGWCC	4 cut(s)	342, 728, 1125, 1264
XapI	RAATTY	4 cut(s)	542, 1214, 1560, 1589
XhoI	CTCGAG	1 cut(s)	1413
XmiI	GTMKAC	1 cut(s)	84
XmnI	GAANNNNTTC	1 cut(s)	1440
XspI	CTAG	2 cut(s)	767, 1242
ZraI	GACGTC	1 cut(s)	1155
Zsp2I	ATGCAT	2 cut(s)	1369, 1622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.