Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003047.1

Orthogroup ID

OG0003035

Physical Location & Seq

Genomic Coordinates Forward (+)

44041 .. 50920

Gene Structure 6880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003047.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

atgtttcacactctcagattgagcgccaggtcctccctcacacgactaatcgccgccgccgccggcacaagcgccaccgcaaccaccggaatctccgtatccggaagagttgctgtcactgctagtggtggtggtggtggtggtggtggtggtgcagaagcagcacaaccccagcagcggcggcacaagtgcagcgaagtcggaggaggagagtacgagaacataagggcggacgtgaactgtccccgatgctcgaagcaaatggcggtcctgttctcgacccgaccgctgtcgattacgggccgagagacgggggtttaccaggccgtgaatctgtgccccaattgcaacaccgccttctatttcaggccatccaagctcctccctttacaaggcactttcgtcgagattggtaggcttaaggcgccgcccactcatgcctctcctcattccacttccgattccgattccggttccggttccggccagaaagacctcttgactcccaaggagatatgtaaggctcttgatgactttgtcatcggccaagaaagagccaaaaaggtgctttcggttgcggtttataaccactacaaaagaatacggcattcttcccaacagagaaggtctggtgtagattcagttgattgtaaacctcacagtgttgatactgattctgttgagttggagaagagcaatgtattattgatgggtcccactggttcagggaagactttacttgcaaaaacactagcccgtgttgtgaatgttccatttgccattgctgatgcaacaacattaacacaggcaggttatgttggagaagatgtggaatcaatattgtatagacttcttacggaagctgagtttgatgtggaagcagctcagaaagggattgtctacattgatgaagttgataagataataaagaaggctgagagcttaaatattggccgagatgtgtctggagagggcgtccaacaggcattgctgaaaatgttggaaggaaccatagttaatgttcctgataaaggagctcggaagcatcctcgtggtgatagtatacagatggatacaaaggatatccttttcatatgtggtggggcttttgttggtttggagaagactatttcagaaagacaccaagattcttccattggatttggagcaccagttcgtgcaaacatgaggtccagtggattgactgacgccatagtgacatcatccttgttggaatctgtagaaagtggcgatcttattgcttatggcctgatacctgaatttgttgggcgctttcctattttagtgagtttgtcatctttaaacgaggatcaacttgttcaggtgctcacagaacctaaaaatgctcttggtaaacagtacaagatgatgtttgacatgaacaatgtcaaattacattttactgacgatgcactgagattgattgcaaggaaggcaatggcaaagaacaccggtgctcgaggtttgagagccatattggagaatattcttacagaagcaatgttcgaggttccagacatcaagacagaaaccaatagtatacatgcagttctggttgatgaagaagctgttgggtcagtggatgctccaggacgaggagcaaaaattcttagtggtgaaggcatagtggagcaatttcttcatgaaacaaagtcgagagagcacatgggaaagcaggggcctgctgaaggcgaatgttcgcaagaagttttggagcttcaatcaagagccttaggtttatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04112 map04112

Pfam Domains

Protein Families

AAA_2 ClpB_D2-small

Protein Analysis

587

Amino Acids

62.82

Weight (kDa)

6.39

Isoelectric Point (pI)

37.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003035)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49840 AT5G49840 AT5G49840 AT5G49840
fragaria_vesca	FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740 FvH4_5g27740
malus_domestica	MD08G1248400.v1.1
prunus_persica	Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1 Prupe.1G585800_v2.0.a1
pyrus_communis	pycom08g21520
rosa_chinensis	RchiOBHm_Chr7g0219511
rosa_laevigata	RLG00000002286
rosa_multiflora	Rmu_sc0003047.1_g000013
rosa_roxburghii	Rroxscaffold_3G00240000
rosa_rugosa	Rorug07G0185800 Rorug07G0185900
rosa_samantha	Rh7AG328400 Rh7BG318900 Rh7CG345800 Rh7DG324800
rosa_wichuraiana	Rw7G027750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	585
Acc36I	ACCTGC	1 cut(s)	800
AccB1I	GGYRCC	1 cut(s)	424
AccI	GTMKAC	3 cut(s)	900, 1063, 1561
AccIII	TCCGGA	1 cut(s)	101
AclWI	GGATC	1 cut(s)	1338
AcoI	YGGCCR	3 cut(s)	484, 544, 952
AcsI	RAATTY	2 cut(s)	1280, 1626
AcuI	CTGAAG	1 cut(s)	1728
AcyI	GRCGYC	3 cut(s)	425, 975, 1209
AfaI	GTAC	2 cut(s)	215, 1382
AfiI	CCNNNNNNNGG	6 cut(s)	177, 310, 392, 1031, 1616, 1709
AflII	CTTAAG	1 cut(s)	419
AgeI	ACCGGT	1 cut(s)	1472
AgsI	TTSAA	1 cut(s)	1742
AjiI	CACGTC	1 cut(s)	235
AjnI	CCWGG	3 cut(s)	26, 321, 1609
AjuI	GAANNNNNNNTTGG	2 cut(s)	1575, 1607
AloI	GAACNNNNNNTCC	2 cut(s)	1158, 1190
AluBI	AGCT	7 cut(s)	379, 863, 884, 942, 1037, 1589, 1738
AluI	AGCT	7 cut(s)	379, 863, 884, 942, 1037, 1589, 1738
Alw21I	GWGCWC	5 cut(s)	1039, 1171, 1350, 1480, 1686
Alw26I	GTCTC	1 cut(s)	302
AlwI	GGATC	1 cut(s)	1338
Ama87I	CYCGRG	1 cut(s)	1479
Aor13HI	TCCGGA	1 cut(s)	101
AoxI	GGCC	8 cut(s)	301, 324, 368, 484, 544, 952, 1267, 1700
ApeKI	GCWGC	4 cut(s)	161, 175, 192, 881
ApoI	RAATTY	2 cut(s)	1280, 1626
ArsI	GACNNNNNNTTYG	2 cut(s)	1175, 1207
AsiGI	ACCGGT	1 cut(s)	1472
AspLEI	GCGC	4 cut(s)	26, 74, 427, 1293
AspS9I	GGNCC	6 cut(s)	30, 268, 301, 713, 1191, 1700
AsuHPI	GGTGA	2 cut(s)	1067, 1649
AvaI	CYCGRG	1 cut(s)	1479
AvaII	GGWCC	4 cut(s)	30, 268, 713, 1191
AxyI	CCTNAGG	1 cut(s)	1753
BaeGI	GKGCMC	1 cut(s)	341
BanI	GGYRCC	1 cut(s)	424
BanII	GRGCYC	1 cut(s)	1039
BauI	CACGAG	1 cut(s)	1050
BbsI	GAAGAC	2 cut(s)	737, 1130
Bbv12I	GWGCWC	5 cut(s)	1039, 1171, 1350, 1480, 1686
BbvI	GCAGC	4 cut(s)	173, 187, 204, 893
BccI	CCATC	3 cut(s)	379, 703, 1063
BceAI	ACGGC	2 cut(s)	311, 620
BcgI	CGANNNNNNTGC	6 cut(s)	181, 215, 385, 419, 1241, 1275
BciT130I	CCWGG	3 cut(s)	28, 323, 1611
BciVI	GTATCC	2 cut(s)	109, 1066
BcoDI	GTCTC	1 cut(s)	302
BfaI	CTAG	2 cut(s)	123, 752
BfmI	CTRYAG	1 cut(s)	1239
BfoI	RGCGCY	4 cut(s)	27, 75, 428, 1294
BfrI	CTTAAG	1 cut(s)	419
BfuAI	ACCTGC	1 cut(s)	800
BfuI	GTATCC	2 cut(s)	109, 1066
Bme1390I	CCNGG	3 cut(s)	28, 323, 1611
Bme18I	GGWCC	4 cut(s)	30, 268, 713, 1191
BmeT110I	CYCGRG	1 cut(s)	1479
BmgBI	CACGTC	1 cut(s)	235
BmgT120I	GGNCC	6 cut(s)	30, 268, 301, 713, 1191, 1700
BmiI	GGNNCC	8 cut(s)	426, 475, 481, 714, 715, 1009, 1533, 1701
BmrFI	CCNGG	3 cut(s)	28, 323, 1611
BmsI	GCATC	5 cut(s)	239, 778, 1054, 1420, 1594
BoxI	GACNNNNGTC	1 cut(s)	289
BpiI	GAAGAC	2 cut(s)	737, 1130
BpmI	CTGGAG	2 cut(s)	987, 1593
BsaHI	GRCGYC	3 cut(s)	425, 975, 1209
BsaJI	CCNNGG	1 cut(s)	507
BsaWI	WCCGGW	5 cut(s)	86, 101, 470, 476, 1472
BsaXI	ACNNNNNCTCC	6 cut(s)	813, 843, 960, 990, 1158, 1188
Bsc4I	CCNNNNNNNGG	6 cut(s)	177, 310, 392, 1031, 1616, 1709
Bse118I	RCCGGY	2 cut(s)	62, 1472
Bse1I	ACTGG	3 cut(s)	724, 1172, 1194
Bse21I	CCTNAGG	1 cut(s)	1753
Bse3DI	GCAATG	5 cut(s)	703, 780, 986, 1464, 1527
BseAI	TCCGGA	1 cut(s)	101
BseBI	CCWGG	3 cut(s)	28, 323, 1611
BseDI	CCNNGG	1 cut(s)	507
BseGI	GGATG	4 cut(s)	371, 1045, 1223, 1609
BseLI	CCNNNNNNNGG	6 cut(s)	177, 310, 392, 1031, 1616, 1709
BseMI	GCAATG	5 cut(s)	703, 780, 986, 1464, 1527
BseMII	CTCAG	5 cut(s)	28, 855, 899, 927, 1427
BseNI	ACTGG	3 cut(s)	724, 1172, 1194
BseRI	GAGGAG	5 cut(s)	219, 222, 371, 435, 1632
BseSI	GKGCMC	1 cut(s)	341
BseXI	GCAGC	4 cut(s)	173, 187, 204, 893
BseYI	CCCAGC	1 cut(s)	171
BsgI	GTGCAG	2 cut(s)	174, 211
Bsh1285I	CGRYCG	1 cut(s)	287
BshFI	GGCC	8 cut(s)	303, 326, 370, 486, 546, 954, 1269, 1702
BshNI	GGYRCC	1 cut(s)	424
BshTI	ACCGGT	1 cut(s)	1472
BsiEI	CGRYCG	1 cut(s)	287
BsiHKAI	GWGCWC	5 cut(s)	1039, 1171, 1350, 1480, 1686
BsiHKCI	CYCGRG	1 cut(s)	1479
BsiSI	CCGG	7 cut(s)	63, 87, 102, 471, 477, 483, 1473
BslFI	GGGAC	2 cut(s)	228, 699
BslI	CCNNNNNNNGG	6 cut(s)	177, 310, 392, 1031, 1616, 1709
BsmAI	GTCTC	1 cut(s)	302
BsmBI	CGTCTC	1 cut(s)	302
BsmFI	GGGAC	2 cut(s)	228, 699
BsmI	GAATGC	1 cut(s)	607
BsnI	GGCC	8 cut(s)	303, 326, 370, 486, 546, 954, 1269, 1702
BsoBI	CYCGRG	1 cut(s)	1479
Bsp1286I	GDGCHC	6 cut(s)	341, 1039, 1171, 1350, 1480, 1686
Bsp13I	TCCGGA	1 cut(s)	101
Bsp143I	GATC	2 cut(s)	1252, 1330
BspANI	GGCC	8 cut(s)	303, 326, 370, 486, 546, 954, 1269, 1702
BspCNI	CTCAG	5 cut(s)	27, 856, 898, 928, 1428
BspEI	TCCGGA	1 cut(s)	101
BspHI	TCATGA	1 cut(s)	1663
BspLI	GGNNCC	8 cut(s)	426, 475, 481, 714, 715, 1009, 1533, 1701
BspMI	ACCTGC	1 cut(s)	800
BspPI	GGATC	1 cut(s)	1338
BspQI	GCTCTTC	1 cut(s)	686
BspT107I	GGYRCC	1 cut(s)	424
BspTI	CTTAAG	1 cut(s)	419
BsrDI	GCAATG	5 cut(s)	703, 780, 986, 1464, 1527
BsrFI	RCCGGY	2 cut(s)	62, 1472
BsrI	ACTGG	3 cut(s)	724, 1172, 1194
BssAI	RCCGGY	2 cut(s)	62, 1472
BssECI	CCNNGG	1 cut(s)	507
BssMI	GATC	2 cut(s)	1252, 1330
BssNAI	GTATAC	2 cut(s)	1064, 1562
BssNI	GRCGYC	3 cut(s)	425, 975, 1209
BssSI	CACGAG	1 cut(s)	1050
BssT1I	CCWWGG	1 cut(s)	507
Bst1107I	GTATAC	2 cut(s)	1064, 1562
Bst2BI	CACGAG	1 cut(s)	1050
Bst2UI	CCWGG	3 cut(s)	28, 323, 1611
Bst4CI	ACNGT	3 cut(s)	242, 662, 1380
Bst6I	CTCTTC	2 cut(s)	100, 686
BstACI	GRCGYC	3 cut(s)	425, 975, 1209
BstAFI	CTTAAG	1 cut(s)	419
BstC8I	GCNNGC	2 cut(s)	64, 1704
BstDEI	CTNAG	7 cut(s)	14, 864, 885, 936, 1436, 1631, 1753
BstENI	CCTNNNNNAGG	3 cut(s)	390, 1029, 1707
BstF5I	GGATG	4 cut(s)	371, 1045, 1223, 1609
BstH2I	RGCGCY	4 cut(s)	27, 75, 428, 1294
BstHHI	GCGC	4 cut(s)	26, 74, 427, 1293
BstKTI	GATC	2 cut(s)	1255, 1333
BstMAI	GTCTC	1 cut(s)	302
BstMBI	GATC	2 cut(s)	1252, 1330
BstMCI	CGRYCG	1 cut(s)	287
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 119, 161, 181, 345, 376, 424, 1454
BstNI	CCWGG	3 cut(s)	28, 323, 1611
BstNSI	RCATGY	1 cut(s)	1568
BstPAI	GACNNNNGTC	1 cut(s)	289
BstSCI	CCNGG	3 cut(s)	26, 321, 1609
BstSFI	CTRYAG	1 cut(s)	1239
BstSLI	GKGCMC	1 cut(s)	341
BstV1I	GCAGC	4 cut(s)	173, 187, 204, 893
BstV2I	GAAGAC	2 cut(s)	737, 1130
BstZ17I	GTATAC	2 cut(s)	1064, 1562
Bsu36I	CCTNAGG	1 cut(s)	1753
BsuI	GTATCC	2 cut(s)	109, 1066
BsuRI	GGCC	8 cut(s)	303, 326, 370, 486, 546, 954, 1269, 1702
BtrI	CACGTC	1 cut(s)	235
BtsCI	GGATG	4 cut(s)	371, 1045, 1223, 1609
BtsI	GCAGTG	1 cut(s)	117
BtsIMutI	CAGTG	6 cut(s)	117, 667, 717, 1201, 1433, 1605
BveI	ACCTGC	1 cut(s)	800
Cac8I	GCNNGC	2 cut(s)	64, 1704
CciI	TCATGA	1 cut(s)	1663
CfoI	GCGC	4 cut(s)	26, 74, 427, 1293
Cfr10I	RCCGGY	2 cut(s)	62, 1472
Cfr13I	GGNCC	6 cut(s)	30, 268, 301, 713, 1191, 1700
CseI	GACGC	2 cut(s)	964, 1217
Csp6I	GTAC	2 cut(s)	214, 1381
CspAI	ACCGGT	1 cut(s)	1472
CviAII	CATG	6 cut(s)	437, 1186, 1399, 1565, 1664, 1687
CviQI	GTAC	2 cut(s)	214, 1381
DdeI	CTNAG	7 cut(s)	14, 864, 885, 936, 1436, 1631, 1753
DinI	GGCGCC	1 cut(s)	426
DpnI	GATC	2 cut(s)	1254, 1332
DpnII	GATC	2 cut(s)	1252, 1330
DraI	TTTAAA	1 cut(s)	1323
EaeI	YGGCCR	3 cut(s)	484, 544, 952
Eam1104I	CTCTTC	2 cut(s)	100, 686
EarI	CTCTTC	2 cut(s)	100, 686
EciI	GGCGGA	1 cut(s)	245
Ecl136II	GAGCTC	1 cut(s)	1037
Eco130I	CCWWGG	1 cut(s)	507
Eco24I	GRGCYC	1 cut(s)	1039
Eco32I	GATATC	1 cut(s)	1084
Eco47I	GGWCC	4 cut(s)	30, 268, 713, 1191
Eco53kI	GAGCTC	1 cut(s)	1037
Eco57I	CTGAAG	1 cut(s)	1728
Eco81I	CCTNAGG	1 cut(s)	1753
Eco88I	CYCGRG	1 cut(s)	1479
EcoICRI	GAGCTC	1 cut(s)	1037
EcoNI	CCTNNNNNAGG	3 cut(s)	390, 1029, 1707
EcoO109I	RGGNCCY	3 cut(s)	30, 713, 1700
EcoRII	CCWGG	3 cut(s)	26, 321, 1609
EcoRV	GATATC	1 cut(s)	1084
EcoT14I	CCWWGG	1 cut(s)	507
EcoT38I	GRGCYC	1 cut(s)	1039
EgeI	GGCGCC	1 cut(s)	426
EheI	GGCGCC	1 cut(s)	426
ErhI	CCWWGG	1 cut(s)	507
Esp3I	CGTCTC	1 cut(s)	302
FaeI	CATG	6 cut(s)	440, 1189, 1402, 1568, 1667, 1690
FaqI	GGGAC	2 cut(s)	228, 699
FatI	CATG	6 cut(s)	436, 1185, 1398, 1564, 1663, 1686
FauNDI	CATATG	1 cut(s)	1094
FblI	GTMKAC	3 cut(s)	900, 1063, 1561
FokI	GGATG	4 cut(s)	358, 1032, 1210, 1616
FriOI	GRGCYC	1 cut(s)	1039
FspBI	CTAG	2 cut(s)	123, 752
GlaI	GCGC	4 cut(s)	25, 73, 426, 1292
GsaI	CCCAGC	1 cut(s)	175
GsuI	CTGGAG	2 cut(s)	987, 1593
HaeII	RGCGCY	4 cut(s)	27, 75, 428, 1294
HaeIII	GGCC	8 cut(s)	303, 326, 370, 486, 546, 954, 1269, 1702
HapII	CCGG	7 cut(s)	63, 87, 102, 471, 477, 483, 1473
HgaI	GACGC	2 cut(s)	964, 1217
HhaI	GCGC	4 cut(s)	26, 74, 427, 1293
Hin1I	GRCGYC	3 cut(s)	425, 975, 1209
Hin1II	CATG	6 cut(s)	440, 1189, 1402, 1568, 1667, 1690
Hin6I	GCGC	4 cut(s)	24, 72, 425, 1291
HinP1I	GCGC	4 cut(s)	24, 72, 425, 1291
HpaII	CCGG	7 cut(s)	63, 87, 102, 471, 477, 483, 1473
HphI	GGTGA	2 cut(s)	1067, 1649
Hpy166II	GTNNAC	7 cut(s)	238, 319, 653, 901, 1064, 1376, 1562
Hpy188I	TCNGA	7 cut(s)	17, 203, 460, 466, 888, 1041, 1135
Hpy8I	GTNNAC	7 cut(s)	238, 319, 653, 901, 1064, 1376, 1562
Hpy99I	CGWCG	1 cut(s)	407
HpyAV	CCTTC	7 cut(s)	367, 618, 925, 998, 1447, 1634, 1703
HpyCH4III	ACNGT	3 cut(s)	242, 662, 1380
HpyCH4IV	ACGT	1 cut(s)	234
HpyCH4V	TGCA	9 cut(s)	155, 192, 348, 743, 791, 1181, 1433, 1448, 1568
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 119, 161, 181, 345, 376, 424, 1454
HpyF3I	CTNAG	7 cut(s)	14, 864, 885, 936, 1436, 1631, 1753
HpySE526I	ACGT	1 cut(s)	234
Hsp92I	GRCGYC	3 cut(s)	425, 975, 1209
Hsp92II	CATG	6 cut(s)	440, 1189, 1402, 1568, 1667, 1690
HspAI	GCGC	4 cut(s)	24, 72, 425, 1291
KasI	GGCGCC	1 cut(s)	424
KflI	GGGWCCC	1 cut(s)	713
Kpn2I	TCCGGA	1 cut(s)	101
KroI	GCCGGC	1 cut(s)	62
KroNI	GCCGGC	1 cut(s)	64
Kzo9I	GATC	2 cut(s)	1252, 1330
LguI	GCTCTTC	1 cut(s)	686
LmnI	GCTCC	7 cut(s)	384, 1034, 1166, 1612, 1619, 1651, 1735
Lsp1109I	GCAGC	4 cut(s)	173, 187, 204, 893
LweI	GCATC	5 cut(s)	239, 778, 1054, 1420, 1594
MaeI	CTAG	2 cut(s)	123, 752
MaeII	ACGT	1 cut(s)	234
MaeIII	GTNAC	2 cut(s)	115, 1216
MalI	GATC	2 cut(s)	1254, 1332
MboI	GATC	2 cut(s)	1252, 1330
MboII	GAAGA	9 cut(s)	117, 603, 703, 742, 836, 1135, 1143, 1595, 1652
MfeI	CAATTG	1 cut(s)	343
MhlI	GDGCHC	6 cut(s)	341, 1039, 1171, 1350, 1480, 1686
MluCI	AATT	5 cut(s)	343, 1280, 1412, 1626, 1655
Mly113I	GGCGCC	1 cut(s)	425
MlyI	GAGTC	1 cut(s)	496
MmeI	TCCRAC	6 cut(s)	181, 666, 799, 981, 1003, 1212
MroI	TCCGGA	1 cut(s)	101
MroNI	GCCGGC	1 cut(s)	62
MseI	TTAA	5 cut(s)	420, 800, 944, 1017, 1322
MslI	CAYNNNNRTG	1 cut(s)	1050
MspA1I	CMGCKG	2 cut(s)	178, 289
MspCI	CTTAAG	1 cut(s)	419
MspI	CCGG	7 cut(s)	63, 87, 102, 471, 477, 483, 1473
MspR9I	CCNGG	3 cut(s)	28, 323, 1611
MunI	CAATTG	1 cut(s)	343
Mva1269I	GAATGC	1 cut(s)	607
MvaI	CCWGG	3 cut(s)	28, 323, 1611
MwoI	GCNNNNNNNGC	8 cut(s)	59, 119, 161, 181, 345, 376, 424, 1454
NaeI	GCCGGC	1 cut(s)	64
NarI	GGCGCC	1 cut(s)	425
NdeI	CATATG	1 cut(s)	1094
NdeII	GATC	2 cut(s)	1252, 1330
NgoMIV	GCCGGC	1 cut(s)	62
NlaIII	CATG	6 cut(s)	440, 1189, 1402, 1568, 1667, 1690
NlaIV	GGNNCC	8 cut(s)	426, 475, 481, 714, 715, 1009, 1533, 1701
NmeAIII	GCCGAG	2 cut(s)	329, 980
NmuCI	GTSAC	2 cut(s)	115, 1216
NspI	RCATGY	1 cut(s)	1568
PaeR7I	CTCGAG	1 cut(s)	1479
PagI	TCATGA	1 cut(s)	1663
PciSI	GCTCTTC	1 cut(s)	686
PctI	GAATGC	1 cut(s)	607
PdiI	GCCGGC	1 cut(s)	64
PfeI	GAWTC	9 cut(s)	90, 331, 461, 467, 638, 674, 833, 1148, 1235
PflFI	GACNNNGTC	1 cut(s)	536
PfoI	TCCNGGA	1 cut(s)	1609
PinAI	ACCGGT	1 cut(s)	1472
PleI	GAGTC	1 cut(s)	496
PluTI	GGCGCC	1 cut(s)	428
PpsI	GAGTC	1 cut(s)	496
PpuMI	RGGWCCY	2 cut(s)	30, 713
PshAI	GACNNNNGTC	1 cut(s)	289
PsiI	TTATAA	1 cut(s)	585
Psp124BI	GAGCTC	1 cut(s)	1039
Psp5II	RGGWCCY	2 cut(s)	30, 713
Psp6I	CCWGG	3 cut(s)	26, 321, 1609
PspFI	CCCAGC	1 cut(s)	171
PspGI	CCWGG	3 cut(s)	26, 321, 1609
PspN4I	GGNNCC	8 cut(s)	426, 475, 481, 714, 715, 1009, 1533, 1701
PspPI	GGNCC	6 cut(s)	30, 268, 301, 713, 1191, 1700
PspPPI	RGGWCCY	2 cut(s)	30, 713
PspXI	VCTCGAGB	1 cut(s)	1479
PsyI	GACNNNGTC	1 cut(s)	536
RsaI	GTAC	2 cut(s)	215, 1382
RsaNI	GTAC	2 cut(s)	214, 1381
RseI	CAYNNNNRTG	1 cut(s)	1050
SacI	GAGCTC	1 cut(s)	1039
SapI	GCTCTTC	1 cut(s)	686
SaqAI	TTAA	5 cut(s)	420, 800, 944, 1017, 1322
Sau3AI	GATC	2 cut(s)	1252, 1330
Sau96I	GGNCC	6 cut(s)	30, 268, 301, 713, 1191, 1700
SchI	GAGTC	1 cut(s)	496
ScrFI	CCNGG	3 cut(s)	28, 323, 1611
SduI	GDGCHC	6 cut(s)	341, 1039, 1171, 1350, 1480, 1686
SfaNI	GCATC	5 cut(s)	239, 778, 1054, 1420, 1594
SfcI	CTRYAG	1 cut(s)	1239
SfoI	GGCGCC	1 cut(s)	426
Sfr274I	CTCGAG	1 cut(s)	1479
SgrAI	CRCCGGYG	1 cut(s)	1472
SinI	GGWCC	4 cut(s)	30, 268, 713, 1191
SlaI	CTCGAG	1 cut(s)	1479
SmiMI	CAYNNNNRTG	1 cut(s)	1050
SmlI	CTYRAG	2 cut(s)	419, 1479
SmoI	CTYRAG	2 cut(s)	419, 1479
Sse9I	AATT	5 cut(s)	343, 1280, 1412, 1626, 1655
SspDI	GGCGCC	1 cut(s)	424
SspI	AATATT	3 cut(s)	840, 949, 1507
SspMI	CTAG	2 cut(s)	123, 752
SstI	GAGCTC	1 cut(s)	1039
StyD4I	CCNGG	3 cut(s)	26, 321, 1609
StyI	CCWWGG	1 cut(s)	507
TaaI	ACNGT	3 cut(s)	242, 662, 1380
TaiI	ACGT	1 cut(s)	237
TaqI	TCGA	7 cut(s)	254, 278, 293, 405, 1480, 1527, 1676
TasI	AATT	5 cut(s)	343, 1280, 1412, 1626, 1655
TatI	WGTACW	1 cut(s)	1380
TauI	GCSGC	6 cut(s)	56, 59, 62, 181, 184, 430
TfiI	GAWTC	9 cut(s)	90, 331, 461, 467, 638, 674, 833, 1148, 1235
Tru1I	TTAA	5 cut(s)	420, 800, 944, 1017, 1322
Tru9I	TTAA	5 cut(s)	420, 800, 944, 1017, 1322
TscAI	CASTG	6 cut(s)	124, 667, 724, 1201, 1440, 1605
TseFI	GTSAC	2 cut(s)	115, 1216
TseI	GCWGC	4 cut(s)	161, 175, 192, 881
Tsp45I	GTSAC	2 cut(s)	115, 1216
TspDTI	ATGAA	6 cut(s)	924, 1081, 1415, 1596, 1652, 1680
TspGWI	ACGGA	2 cut(s)	85, 872
TspRI	CASTG	6 cut(s)	124, 667, 724, 1201, 1440, 1605
Tth111I	GACNNNGTC	1 cut(s)	536
Vha464I	CTTAAG	1 cut(s)	419
VpaK11BI	GGWCC	4 cut(s)	30, 268, 713, 1191
XagI	CCTNNNNNAGG	3 cut(s)	390, 1029, 1707
XapI	RAATTY	2 cut(s)	1280, 1626
XceI	RCATGY	1 cut(s)	1568
XhoI	CTCGAG	1 cut(s)	1479
XmiI	GTMKAC	3 cut(s)	900, 1063, 1561
XspI	CTAG	2 cut(s)	123, 752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.