Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0006876

Physical Location & Seq

Genomic Coordinates Forward (+)

2832520 .. 2835223

Gene Structure 2704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g03810.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGCGCACGGCGGCGGACCAAGGCAGGTGAAACTGGACCGAGAGAGGGAGCTCAGAATCGAAGTCGGCTACGACGCCCCTCTCAAGCTCCGCCTGCTCAGCGGCACCGCTGGGATCTTCGGCACCGAGCTCCCCCCTGATTTCTGGCTCACCTTCCCGCCCAGGCTCAAATTTGCTGTTTTTACTTGGAACGGAGCAACAATTGAGATGGAGGGCAGTACGGAAACGGAGTACACGGCTGATGAGACTCCAAATATCAGCTATGTGAATGTGCACGCCGTACTGGAAGAACGGAGACACCGCGCTAAACCCTTTCCGCCCGATGACCCCAATTCTCAGGGCCCAAGGGTGATTGTTGTGGGACCAACAGATTCTGGGAAAAGTACCTTGTCGAAAATGCTTCTTAGTTGGGCAGCTAAGAAGGGATGGAAACCTACTTTCGTCGACTTGGATATTGGACAAGGAGCTATAACAATTCCAGGATGCATTGCCGCTACTCCTATTGAAATGCCTATTGATCCGGTTGAAGGAATTCCTCTTGATATTCCTCTTGTTTATTTCTATGGGCACACAACTCCTAGTAATAATGTAGATTTATACAAAGTGCTTGTGAAGGAGCTTGCTCAAGTGGTAGAAAGACAACTTTCTGGGAATGCTGAATCTCGAGCTTCTGGAATGGTGATCAATACCATGGGATGGATAGAAGGTCAAGGCTACGAGTTGCTTCTTCATGCAATTGATACATTCAATGCCAATGTTGTCTTAGTTCTGGGCCAGGAAAAACTTTGGAGCATGATCAGAAATGTACTAAAGAACAAGCCTGGTGTGGACGTTGTAAAACTTCAAAAATCTGGGGGTGTTGTATACAGGAATGCCAAATTCCGTCAAAAATCCAGGAGTCATAGGATAAGGGAGTATTTCTATGGCCTTGCAAATGATCTCAGCCCACATTCTAATATCGCGAATTTTAGTGACTTTTCTGTCTTTCGGATTGGTGGCGGGCCACAGCCCCCACGTTCGGCTTTGCCAATTGGTGCAGAGCCTGCTGCGGACCCTACAAGATTGGCGCCTGTGAATATTAACCGGGATTTGCTACATACCATTCTTGCTGTTTCATTTGCCAAGGAGCCTGATCAAATTATTTCTAGTAATGTTGCTGGGTTTGTCTTTGTCACAGACGTCGACATTCAGAGGAAGACAATTACGTACCGTGCACCATCGGCGGGTGAGCTTCCAAGCAAGTATTTGATTGCAGGAACCGTGACATGGCTTGAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000394 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006378 GO:0006379 GO:0006388 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008380 GO:0009791 GO:0009908 GO:0009987 GO:0010228 GO:0010467 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019205 GO:0022414 GO:0031123 GO:0031124 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0051731 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090567 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CLP1_N CLP1_P Clp1

Protein Analysis

427

Amino Acids

46.87

Weight (kDa)

7.11

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04680 AT3G04680 AT3G04680
fragaria_vesca	FvH4_6g49260 FvH4_6g49260
malus_domestica	MD09G1046200.v1.1 MD09G1046500.v1.1 MD17G1047000.v1.1
prunus_persica	Prupe.3G272100_v2.0.a1
pyrus_communis	pycom09g03810 pycom09g04270 pycom111g03580 pycom111g03600 pycom111g03650 pycom17g04190
rosa_chinensis	RchiOBHm_Chr2g0169161
rosa_laevigata	RLG00000021838
rosa_multiflora	Rmu_ssc0000440.1_g000003
rosa_roxburghii	Rroxscaffold_2G00082380
rosa_rugosa	Rorug02G0537700 Rorug02G0537800
rosa_samantha	Rh2AG609300 Rh2BG622300 Rh2CG591000 Rh2DG633000
rosa_wichuraiana	Rw2G050540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	16
AasI	GACNNNNNNGTC	1 cut(s)	980
AatII	GACGTC	1 cut(s)	1182
Acc36I	ACCTGC	1 cut(s)	16
AccB1I	GGYRCC	3 cut(s)	104, 122, 1066
AccB7I	CCANNNNNTGG	1 cut(s)	696
AccI	GTMKAC	3 cut(s)	444, 864, 1182
AccII	CGCG	2 cut(s)	303, 962
AclWI	GGATC	2 cut(s)	122, 512
AcsI	RAATTY	4 cut(s)	170, 531, 878, 964
AcyI	GRCGYC	3 cut(s)	75, 1067, 1179
AfaI	GTAC	6 cut(s)	220, 233, 282, 385, 807, 1208
AfiI	CCNNNNNNNGG	6 cut(s)	46, 527, 696, 1018, 1223, 1266
AgsI	TTSAA	5 cut(s)	506, 527, 748, 845, 1274
AjnI	CCWGG	5 cut(s)	161, 478, 774, 820, 893
AluBI	AGCT	9 cut(s)	52, 88, 130, 261, 416, 467, 619, 668, 1231
AluI	AGCT	9 cut(s)	52, 88, 130, 261, 416, 467, 619, 668, 1231
Alw21I	GWGCWC	4 cut(s)	54, 132, 276, 1216
Alw26I	GTCTC	2 cut(s)	239, 289
Alw44I	GTGCAC	2 cut(s)	272, 1212
AlwI	GGATC	2 cut(s)	122, 512
AlwNI	CAGNNNCTG	2 cut(s)	374, 1043
Ama87I	CYCGRG	1 cut(s)	663
AoxI	GGCC	4 cut(s)	340, 772, 925, 1001
ApaI	GGGCCC	1 cut(s)	344
ApaLI	GTGCAC	2 cut(s)	272, 1212
ApeKI	GCWGC	2 cut(s)	413, 1046
ApoI	RAATTY	4 cut(s)	170, 531, 878, 964
Asp700I	GAANNNNTTC	1 cut(s)	531
AspLEI	GCGC	3 cut(s)	7, 305, 1069
AspS9I	GGNCC	8 cut(s)	17, 37, 340, 341, 362, 772, 1001, 1051
AsuC2I	CCSGG	1 cut(s)	1085
AsuHPI	GGTGA	5 cut(s)	40, 142, 361, 691, 1238
AvaI	CYCGRG	1 cut(s)	663
AvaII	GGWCC	4 cut(s)	17, 37, 362, 1051
BaeGI	GKGCMC	4 cut(s)	276, 344, 570, 1216
BanI	GGYRCC	3 cut(s)	104, 122, 1066
BanII	GRGCYC	3 cut(s)	54, 132, 344
BbsI	GAAGAC	1 cut(s)	1202
Bbv12I	GWGCWC	4 cut(s)	54, 132, 276, 1216
BbvI	GCAGC	2 cut(s)	425, 1033
BccI	CCATC	4 cut(s)	202, 420, 690, 1225
BceAI	ACGGC	3 cut(s)	25, 252, 263
BciT130I	CCWGG	5 cut(s)	163, 480, 776, 822, 895
BclI	TGATCA	3 cut(s)	681, 795, 1132
BcnI	CCSGG	1 cut(s)	1085
BcoDI	GTCTC	2 cut(s)	239, 289
BfaI	CTAG	2 cut(s)	579, 1146
BfoI	RGCGCY	1 cut(s)	1070
BfuAI	ACCTGC	1 cut(s)	16
BisI	GCNGC	5 cut(s)	13, 103, 414, 492, 1047
BlpI	GCTNAGC	1 cut(s)	98
BlsI	GCNGC	5 cut(s)	14, 104, 415, 493, 1048
Bme1390I	CCNGG	6 cut(s)	163, 480, 776, 822, 895, 1085
Bme18I	GGWCC	4 cut(s)	17, 37, 362, 1051
BmeT110I	CYCGRG	1 cut(s)	663
BmgT120I	GGNCC	8 cut(s)	17, 37, 340, 341, 362, 772, 1001, 1051
BmiI	GGNNCC	8 cut(s)	106, 124, 342, 363, 1053, 1068, 1128, 1258
BmrFI	CCNGG	6 cut(s)	163, 480, 776, 822, 895, 1085
BmsI	GCATC	1 cut(s)	473
BpiI	GAAGAC	1 cut(s)	1202
Bpu1102I	GCTNAGC	1 cut(s)	98
BpuEI	CTTGAG	2 cut(s)	68, 609
BpuMI	CCSGG	1 cut(s)	1085
BsaAI	YACGTR	1 cut(s)	1206
BsaHI	GRCGYC	3 cut(s)	75, 1067, 1179
BsaJI	CCNNGG	5 cut(s)	20, 161, 344, 690, 1122
BsaWI	WCCGGW	1 cut(s)	520
Bsc4I	CCNNNNNNNGG	6 cut(s)	46, 527, 696, 1018, 1223, 1266
Bse1I	ACTGG	2 cut(s)	39, 288
Bse3DI	GCAATG	1 cut(s)	486
BseBI	CCWGG	5 cut(s)	163, 480, 776, 822, 895
BseDI	CCNNGG	5 cut(s)	20, 161, 344, 690, 1122
BseGI	GGATG	3 cut(s)	431, 488, 701
BseLI	CCNNNNNNNGG	6 cut(s)	46, 527, 696, 1018, 1223, 1266
BseMI	GCAATG	1 cut(s)	486
BseMII	CTCAG	4 cut(s)	67, 112, 350, 955
BseNI	ACTGG	2 cut(s)	39, 288
BseSI	GKGCMC	4 cut(s)	276, 344, 570, 1216
BseXI	GCAGC	2 cut(s)	425, 1033
BseYI	CCCAGC	2 cut(s)	110, 1157
BsgI	GTGCAG	1 cut(s)	1056
Bsh1236I	CGCG	2 cut(s)	303, 962
BshFI	GGCC	4 cut(s)	342, 774, 927, 1003
BshNI	GGYRCC	3 cut(s)	104, 122, 1066
BsiHKAI	GWGCWC	4 cut(s)	54, 132, 276, 1216
BsiHKCI	CYCGRG	1 cut(s)	663
BsiSI	CCGG	2 cut(s)	521, 1084
BslFI	GGGAC	1 cut(s)	375
BslI	CCNNNNNNNGG	6 cut(s)	46, 527, 696, 1018, 1223, 1266
BsmAI	GTCTC	2 cut(s)	239, 289
BsmFI	GGGAC	1 cut(s)	375
BsmI	GAATGC	2 cut(s)	658, 877
BsnI	GGCC	4 cut(s)	342, 774, 927, 1003
BsoBI	CYCGRG	1 cut(s)	663
Bsp120I	GGGCCC	1 cut(s)	340
Bsp1286I	GDGCHC	6 cut(s)	54, 132, 276, 344, 570, 1216
Bsp143I	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
Bsp1720I	GCTNAGC	1 cut(s)	98
Bsp19I	CCATGG	1 cut(s)	690
Bsp68I	TCGCGA	1 cut(s)	962
BspANI	GGCC	4 cut(s)	342, 774, 927, 1003
BspCNI	CTCAG	4 cut(s)	66, 111, 349, 954
BspFNI	CGCG	2 cut(s)	303, 962
BspLI	GGNNCC	8 cut(s)	106, 124, 342, 363, 1053, 1068, 1128, 1258
BspMI	ACCTGC	1 cut(s)	16
BspPI	GGATC	2 cut(s)	122, 512
BspT107I	GGYRCC	3 cut(s)	104, 122, 1066
BsrDI	GCAATG	1 cut(s)	486
BsrI	ACTGG	2 cut(s)	39, 288
BssECI	CCNNGG	5 cut(s)	20, 161, 344, 690, 1122
BssMI	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
BssNAI	GTATAC	1 cut(s)	865
BssNI	GRCGYC	3 cut(s)	75, 1067, 1179
BssT1I	CCWWGG	4 cut(s)	20, 344, 690, 1122
Bst1107I	GTATAC	1 cut(s)	865
Bst2UI	CCWGG	5 cut(s)	163, 480, 776, 822, 895
Bst4CI	ACNGT	2 cut(s)	1211, 1261
BstACI	GRCGYC	3 cut(s)	75, 1067, 1179
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstBAI	YACGTR	1 cut(s)	1206
BstC8I	GCNNGC	5 cut(s)	95, 276, 621, 1001, 1044
BstDEI	CTNAG	7 cut(s)	53, 98, 336, 404, 417, 763, 941
BstDSI	CCRYGG	1 cut(s)	690
BstF5I	GGATG	3 cut(s)	431, 488, 701
BstFNI	CGCG	2 cut(s)	303, 962
BstH2I	RGCGCY	1 cut(s)	1070
BstHHI	GCGC	3 cut(s)	7, 305, 1069
BstKTI	GATC	6 cut(s)	117, 520, 684, 798, 940, 1135
BstMAI	GTCTC	2 cut(s)	239, 289
BstMBI	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
BstMWI	GCNNNNNNNGC	4 cut(s)	94, 99, 1043, 1220
BstNI	CCWGG	5 cut(s)	163, 480, 776, 822, 895
BstSCI	CCNGG	6 cut(s)	161, 478, 774, 820, 893, 1083
BstSLI	GKGCMC	4 cut(s)	276, 344, 570, 1216
BstSNI	TACGTA	1 cut(s)	1206
BstUI	CGCG	2 cut(s)	303, 962
BstV1I	GCAGC	2 cut(s)	425, 1033
BstV2I	GAAGAC	1 cut(s)	1202
BstX2I	RGATCY	1 cut(s)	114
BstYI	RGATCY	1 cut(s)	114
BstZ17I	GTATAC	1 cut(s)	865
BsuRI	GGCC	4 cut(s)	342, 774, 927, 1003
BtgI	CCRYGG	1 cut(s)	690
BtsCI	GGATG	3 cut(s)	431, 488, 701
BtuMI	TCGCGA	1 cut(s)	962
BveI	ACCTGC	1 cut(s)	16
Cac8I	GCNNGC	5 cut(s)	95, 276, 621, 1001, 1044
CaiI	CAGNNNCTG	2 cut(s)	374, 1043
CfoI	GCGC	3 cut(s)	7, 305, 1069
Cfr13I	GGNCC	8 cut(s)	17, 37, 340, 341, 362, 772, 1001, 1051
CseI	GACGC	1 cut(s)	83
Csp6I	GTAC	6 cut(s)	219, 232, 281, 384, 806, 1207
CviAII	CATG	5 cut(s)	691, 731, 793, 1266, 1278
CviQI	GTAC	6 cut(s)	219, 232, 281, 384, 806, 1207
DdeI	CTNAG	7 cut(s)	53, 98, 336, 404, 417, 763, 941
DinI	GGCGCC	1 cut(s)	1068
DpnI	GATC	6 cut(s)	116, 519, 683, 797, 939, 1134
DpnII	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
DrdI	GACNNNNNNGTC	1 cut(s)	980
DseDI	GACNNNNNNGTC	1 cut(s)	980
EciI	GGCGGA	3 cut(s)	30, 80, 306
Ecl136II	GAGCTC	2 cut(s)	52, 130
Eco105I	TACGTA	1 cut(s)	1206
Eco130I	CCWWGG	4 cut(s)	20, 344, 690, 1122
Eco24I	GRGCYC	3 cut(s)	54, 132, 344
Eco47I	GGWCC	4 cut(s)	17, 37, 362, 1051
Eco53kI	GAGCTC	2 cut(s)	52, 130
Eco88I	CYCGRG	1 cut(s)	663
EcoICRI	GAGCTC	2 cut(s)	52, 130
EcoO109I	RGGNCCY	1 cut(s)	340
EcoRI	GAATTC	1 cut(s)	531
EcoRII	CCWGG	5 cut(s)	161, 478, 774, 820, 893
EcoT14I	CCWWGG	4 cut(s)	20, 344, 690, 1122
EcoT22I	ATGCAT	1 cut(s)	488
EcoT38I	GRGCYC	3 cut(s)	54, 132, 344
EgeI	GGCGCC	1 cut(s)	1068
EheI	GGCGCC	1 cut(s)	1068
ErhI	CCWWGG	4 cut(s)	20, 344, 690, 1122
FaeI	CATG	5 cut(s)	694, 734, 796, 1269, 1281
FaqI	GGGAC	1 cut(s)	375
FatI	CATG	5 cut(s)	690, 730, 792, 1265, 1277
FauI	CCCGC	3 cut(s)	165, 992, 1216
FbaI	TGATCA	3 cut(s)	681, 795, 1132
FblI	GTMKAC	3 cut(s)	444, 864, 1182
Fnu4HI	GCNGC	5 cut(s)	13, 103, 414, 492, 1047
FokI	GGATG	3 cut(s)	438, 495, 708
FriOI	GRGCYC	3 cut(s)	54, 132, 344
Fsp4HI	GCNGC	5 cut(s)	13, 103, 414, 492, 1047
FspBI	CTAG	2 cut(s)	579, 1146
GlaI	GCGC	3 cut(s)	6, 304, 1068
GluI	GCNGC	5 cut(s)	13, 103, 414, 492, 1047
GsaI	CCCAGC	2 cut(s)	114, 1161
HaeII	RGCGCY	1 cut(s)	1070
HaeIII	GGCC	4 cut(s)	342, 774, 927, 1003
HapII	CCGG	2 cut(s)	521, 1084
HgaI	GACGC	1 cut(s)	83
HhaI	GCGC	3 cut(s)	7, 305, 1069
Hin1I	GRCGYC	3 cut(s)	75, 1067, 1179
Hin1II	CATG	5 cut(s)	694, 734, 796, 1269, 1281
Hin6I	GCGC	3 cut(s)	5, 303, 1067
HinP1I	GCGC	3 cut(s)	5, 303, 1067
HincII	GTYRAC	2 cut(s)	445, 1183
HindII	GTYRAC	2 cut(s)	445, 1183
HinfI	GANTC	5 cut(s)	57, 247, 371, 659, 898
HpaII	CCGG	2 cut(s)	521, 1084
HphI	GGTGA	5 cut(s)	40, 142, 361, 691, 1238
Hpy166II	GTNNAC	7 cut(s)	234, 274, 445, 829, 865, 1183, 1214
Hpy188I	TCNGA	4 cut(s)	56, 800, 990, 1191
Hpy188III	TCNNGA	4 cut(s)	539, 663, 672, 961
Hpy8I	GTNNAC	7 cut(s)	234, 274, 445, 829, 865, 1183, 1214
Hpy99I	CGWCG	3 cut(s)	77, 446, 1184
HpyAV	CCTTC	5 cut(s)	163, 415, 521, 607, 698
HpyCH4III	ACNGT	2 cut(s)	1211, 1261
HpyCH4IV	ACGT	4 cut(s)	831, 1015, 1179, 1205
HpyCH4V	TGCA	7 cut(s)	274, 486, 734, 932, 1037, 1214, 1253
HpyF10VI	GCNNNNNNNGC	4 cut(s)	94, 99, 1043, 1220
HpyF3I	CTNAG	7 cut(s)	53, 98, 336, 404, 417, 763, 941
HpySE526I	ACGT	4 cut(s)	831, 1015, 1179, 1205
Hsp92I	GRCGYC	3 cut(s)	75, 1067, 1179
Hsp92II	CATG	5 cut(s)	694, 734, 796, 1269, 1281
HspAI	GCGC	3 cut(s)	5, 303, 1067
KasI	GGCGCC	1 cut(s)	1066
Ksp22I	TGATCA	3 cut(s)	681, 795, 1132
Kzo9I	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
LmnI	GCTCC	8 cut(s)	49, 93, 135, 194, 464, 616, 789, 1126
Lsp1109I	GCAGC	2 cut(s)	425, 1033
LweI	GCATC	1 cut(s)	473
MaeI	CTAG	2 cut(s)	579, 1146
MaeII	ACGT	4 cut(s)	831, 1015, 1179, 1205
MaeIII	GTNAC	3 cut(s)	971, 1171, 1261
MalI	GATC	6 cut(s)	116, 519, 683, 797, 939, 1134
MboI	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
MboII	GAAGA	4 cut(s)	109, 299, 719, 1207
MfeI	CAATTG	3 cut(s)	201, 735, 1029
MflI	RGATCY	1 cut(s)	114
MhlI	GDGCHC	6 cut(s)	54, 132, 276, 344, 570, 1216
Mly113I	GGCGCC	1 cut(s)	1067
MlyI	GAGTC	2 cut(s)	241, 907
MnlI	CCTC	6 cut(s)	39, 90, 205, 546, 558, 1185
Mph1103I	ATGCAT	1 cut(s)	488
MroXI	GAANNNNTTC	1 cut(s)	531
MseI	TTAA	1 cut(s)	1080
MspA1I	CMGCKG	2 cut(s)	102, 110
MspI	CCGG	2 cut(s)	521, 1084
MspR9I	CCNGG	6 cut(s)	163, 480, 776, 822, 895, 1085
MunI	CAATTG	3 cut(s)	201, 735, 1029
Mva1269I	GAATGC	2 cut(s)	658, 877
MvaI	CCWGG	5 cut(s)	163, 480, 776, 822, 895
MvnI	CGCG	2 cut(s)	303, 962
MwoI	GCNNNNNNNGC	4 cut(s)	94, 99, 1043, 1220
NarI	GGCGCC	1 cut(s)	1067
NciI	CCSGG	1 cut(s)	1085
NcoI	CCATGG	1 cut(s)	690
NdeII	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
NlaIII	CATG	5 cut(s)	694, 734, 796, 1269, 1281
NlaIV	GGNNCC	8 cut(s)	106, 124, 342, 363, 1053, 1068, 1128, 1258
NmuCI	GTSAC	3 cut(s)	971, 1171, 1261
NruI	TCGCGA	1 cut(s)	962
NsiI	ATGCAT	1 cut(s)	488
PaeR7I	CTCGAG	1 cut(s)	663
PaqCI	CACCTGC	1 cut(s)	16
PctI	GAATGC	2 cut(s)	658, 877
PdmI	GAANNNNTTC	1 cut(s)	531
PfeI	GAWTC	3 cut(s)	57, 371, 659
PflMI	CCANNNNNTGG	1 cut(s)	696
PfoI	TCCNGGA	2 cut(s)	478, 893
PkrI	GCNGC	5 cut(s)	14, 104, 415, 493, 1048
PleI	GAGTC	2 cut(s)	241, 906
PluTI	GGCGCC	1 cut(s)	1070
PpsI	GAGTC	2 cut(s)	241, 906
Ppu21I	YACGTR	1 cut(s)	1206
Psp124BI	GAGCTC	2 cut(s)	54, 132
Psp6I	CCWGG	5 cut(s)	161, 478, 774, 820, 893
PspFI	CCCAGC	2 cut(s)	110, 1157
PspGI	CCWGG	5 cut(s)	161, 478, 774, 820, 893
PspN4I	GGNNCC	8 cut(s)	106, 124, 342, 363, 1053, 1068, 1128, 1258
PspOMI	GGGCCC	1 cut(s)	340
PspPI	GGNCC	8 cut(s)	17, 37, 340, 341, 362, 772, 1001, 1051
PstNI	CAGNNNCTG	2 cut(s)	374, 1043
PsuI	RGATCY	1 cut(s)	114
RruI	TCGCGA	1 cut(s)	962
RsaI	GTAC	6 cut(s)	220, 233, 282, 385, 807, 1208
RsaNI	GTAC	6 cut(s)	219, 232, 281, 384, 806, 1207
SacI	GAGCTC	2 cut(s)	54, 132
SalI	GTCGAC	2 cut(s)	443, 1181
SaqAI	TTAA	1 cut(s)	1080
SatI	GCNGC	5 cut(s)	13, 103, 414, 492, 1047
Sau3AI	GATC	6 cut(s)	114, 517, 681, 795, 937, 1132
Sau96I	GGNCC	8 cut(s)	17, 37, 340, 341, 362, 772, 1001, 1051
SchI	GAGTC	2 cut(s)	241, 907
ScrFI	CCNGG	6 cut(s)	163, 480, 776, 822, 895, 1085
SduI	GDGCHC	6 cut(s)	54, 132, 276, 344, 570, 1216
SfaNI	GCATC	1 cut(s)	473
SfoI	GGCGCC	1 cut(s)	1068
Sfr274I	CTCGAG	1 cut(s)	663
SinI	GGWCC	4 cut(s)	17, 37, 362, 1051
SlaI	CTCGAG	1 cut(s)	663
SmlI	CTYRAG	3 cut(s)	83, 624, 663
SmoI	CTYRAG	3 cut(s)	83, 624, 663
SnaBI	TACGTA	1 cut(s)	1206
SspDI	GGCGCC	1 cut(s)	1066
SspI	AATATT	1 cut(s)	1078
SspMI	CTAG	2 cut(s)	579, 1146
SstI	GAGCTC	2 cut(s)	54, 132
StyD4I	CCNGG	6 cut(s)	161, 478, 774, 820, 893, 1083
StyI	CCWWGG	4 cut(s)	20, 344, 690, 1122
TaaI	ACNGT	2 cut(s)	1211, 1261
TaiI	ACGT	4 cut(s)	834, 1018, 1182, 1208
TaqI	TCGA	5 cut(s)	60, 392, 444, 664, 1182
TaqII	GACCGA	1 cut(s)	54
TatI	WGTACW	2 cut(s)	231, 805
TauI	GCSGC	3 cut(s)	15, 105, 494
TfiI	GAWTC	3 cut(s)	57, 371, 659
Tru1I	TTAA	1 cut(s)	1080
Tru9I	TTAA	1 cut(s)	1080
TseFI	GTSAC	3 cut(s)	971, 1171, 1261
TseI	GCWGC	2 cut(s)	413, 1046
Tsp45I	GTSAC	3 cut(s)	971, 1171, 1261
TspDTI	ATGAA	2 cut(s)	719, 1104
TspGWI	ACGGA	5 cut(s)	207, 236, 242, 307, 872
Van91I	CCANNNNNTGG	1 cut(s)	696
VneI	GTGCAC	2 cut(s)	272, 1212
VpaK11BI	GGWCC	4 cut(s)	17, 37, 362, 1051
XapI	RAATTY	4 cut(s)	170, 531, 878, 964
XhoI	CTCGAG	1 cut(s)	663
XmiI	GTMKAC	3 cut(s)	444, 864, 1182
XmnI	GAANNNNTTC	1 cut(s)	531
XspI	CTAG	2 cut(s)	579, 1146
ZraI	GACGTC	1 cut(s)	1180
Zsp2I	ATGCAT	1 cut(s)	488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.