Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006876

Physical Location & Seq

Genomic Coordinates Forward (+)

66684581 .. 66687457

Gene Structure 2877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0537800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGAACAAGCCAGTACTGAAATTCAAGCCCCAAATCCAAACCCTAGTCGAACCCTAAACGATATTCCCGACGAAATCCTGGTCCAAATCCTCTCCTTGATTCCGACCTTAGAGGCCATCCACAACTCTCTCGTCTCCCGCCAATGGCGATCCCTCTGGTCCCGTCTCCCCTTCCTCGACTTCTCCTACCACCTCTTCCCGGTCAACGACGCCGAACCTCTCCCCGTCACGAGCCACCGCTTCGCCGAGTTCGTCGACCGCGCTCTCATCCTCCGCCCCAATTCTCCGATCAAAACCTTCCGCCTCTCTTTCATTTTCTACCACTACTACACCTCCCACGTCGACTCCTGGGTGCGCTCCGCCGTCACGCGCTTCCGGGCGCGTGAGCTCGACCTCGACTTCTTCATCGACAAAGAGTACCATCTCCGGAGCGAGGAAGATCGAGCGCCGCGTGACAAGTATGATTTCCCTTTCTCTGTGCTGAGAAACGGGTGCGTTGAGAGTCTGAGGCTCACGTACGTTGATCTCGCGTTGCCGGCGAGCATGGCCACCGTGGGGATGAGCTCGGTGAGGTCGATGTTTCTTGAGGACGTGGATTTGACGGACCAGATGTGGGAGCGTTTGATTTTGGGGTGCCCCAATCTTGAGGATTTGGAGCTTCAAAATGGAGGGATGGATCAGAATTTGAGGATATGTAGCACAAGCCTTAAGAAGCTAAAGTTTGGGTATTTTTATGACTGTTATTACAAGAACACTGTTGAGATTGATTGCCCAAACCTTGTTTCGCTGAGTTTTGATTGCATTAGCTTTACTCAGTTTCGACTTAAGAATGCATCTTCCCTGGTCGAGTTTCATCTTAATATGGTGCACCTAGATAAGTACTATGATTCGTGGAGTAAGGCTGTGAAGCTGCTTGGATCAGCGCCGAATGTCAAGTGTGTTAATGTGCAAAATTGGTGGTTCAAGTTGCTGACATCAAAGGATTCTTTCCCAAAAACTTTTACGCTCCACAACCTCAGCCTCTTAGAGCTACGGACAGGGTATACTCAATATGATCTGGTTGGCATGGCTGCAGTACTTGAACTTTGTCCCAATCTTGAGACAATGATTCTTGATTACCTTCACAAGATAGAAGTTGATGAGAGTTTACCAGAAGCGATCTTAAATAAACCAGTTAGATTCAATATGCCAAGACTCAAGCAAGTTAAGATGCTGAAATTTTTTGGATCGGAAGATGAAAATAATTTTGTGACTTTGTTGAAAAAGCAAGGAGTTGTCTTACAAAAGATTACACTTTTTCCTATCAAAGTCGAGGGGAACTCATCCCACCAATATCCTCCAATAGTTCTAAACCCTCGAGAATGTGAAGTAACAGGATCTTCTCCTCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000394 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006378 GO:0006379 GO:0006388 GO:0006396 GO:0006397 GO:0006399 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008380 GO:0009791 GO:0009908 GO:0009987 GO:0010228 GO:0010467 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019205 GO:0022414 GO:0031123 GO:0031124 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0051731 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090567 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

CLP1_N CLP1_P Clp1

Protein Analysis

463

Amino Acids

53.56

Weight (kDa)

5.93

Isoelectric Point (pI)

47.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	19 - 59	1.4e-06	F-box domain
LRR_At1g61320_AtMIF1	PF23622	97 - 410	1.1e-23	At1g61320/AtMIF1, LRR domain
LRR_At5g56370	PF24758	151 - 264	2.4e-08	FBD-associated F-box protein At5g56370, LRR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006876)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04680 AT3G04680 AT3G04680
fragaria_vesca	FvH4_6g49260 FvH4_6g49260
malus_domestica	MD09G1046200.v1.1 MD09G1046500.v1.1 MD17G1047000.v1.1
prunus_persica	Prupe.3G272100_v2.0.a1
pyrus_communis	pycom09g03810 pycom09g04270 pycom111g03580 pycom111g03600 pycom111g03650 pycom17g04190
rosa_chinensis	RchiOBHm_Chr2g0169161
rosa_laevigata	RLG00000021838
rosa_multiflora	Rmu_ssc0000440.1_g000003
rosa_roxburghii	Rroxscaffold_2G00082380
rosa_rugosa	Rorug02G0537700 Rorug02G0537800
rosa_samantha	Rh2AG609300 Rh2BG622300 Rh2CG591000 Rh2DG633000
rosa_wichuraiana	Rw2G050540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	633
AccI	GTMKAC	3 cut(s)	255, 342, 1043
AccII	CGCG	5 cut(s)	261, 370, 382, 451, 530
AccIII	TCCGGA	1 cut(s)	426
AciI	CCGC	7 cut(s)	139, 238, 259, 274, 301, 360, 449
AclWI	GGATC	5 cut(s)	144, 684, 925, 1234, 1384
AcoI	YGGCCR	1 cut(s)	546
AcsI	RAATTY	3 cut(s)	21, 682, 1217
AcyI	GRCGYC	1 cut(s)	210
AfaI	GTAC	5 cut(s)	16, 419, 518, 881, 1077
AfiI	CCNNNNNNNGG	5 cut(s)	144, 199, 433, 555, 613
AflII	CTTAAG	2 cut(s)	707, 824
AgsI	TTSAA	6 cut(s)	26, 662, 964, 1082, 1183, 1261
AjiI	CACGTC	2 cut(s)	340, 592
AjnI	CCWGG	3 cut(s)	78, 347, 840
AjuI	GAANNNNNNNTTGG	2 cut(s)	766, 798
AluBI	AGCT	7 cut(s)	388, 564, 658, 715, 807, 910, 1030
AluI	AGCT	7 cut(s)	388, 564, 658, 715, 807, 910, 1030
Alw21I	GWGCWC	3 cut(s)	390, 566, 870
Alw26I	GTCTC	3 cut(s)	139, 170, 1094
Alw44I	GTGCAC	1 cut(s)	866
AlwI	GGATC	5 cut(s)	144, 684, 925, 1234, 1384
Ama87I	CYCGRG	1 cut(s)	1356
Aor13HI	TCCGGA	1 cut(s)	426
AoxI	GGCC	2 cut(s)	114, 546
ApaLI	GTGCAC	1 cut(s)	866
ApeKI	GCWGC	2 cut(s)	910, 1070
ApoI	RAATTY	3 cut(s)	21, 682, 1217
ArsI	GACNNNNNNTTYG	2 cut(s)	66, 98
AspLEI	GCGC	6 cut(s)	263, 357, 372, 382, 448, 925
AspS9I	GGNCC	3 cut(s)	82, 159, 604
AsuC2I	CCSGG	2 cut(s)	200, 377
AsuHPI	GGTGA	1 cut(s)	580
AvaI	CYCGRG	1 cut(s)	1356
AvaII	GGWCC	3 cut(s)	82, 159, 604
BaeGI	GKGCMC	2 cut(s)	638, 870
BalI	TGGCCA	1 cut(s)	548
BanI	GGYRCC	1 cut(s)	633
BanII	GRGCYC	2 cut(s)	390, 566
BauI	CACGAG	1 cut(s)	229
Bbv12I	GWGCWC	3 cut(s)	390, 566, 870
BbvCI	CCTCAGC	1 cut(s)	1016
BbvI	GCAGC	2 cut(s)	897, 1057
BccI	CCATC	3 cut(s)	125, 429, 667
BceAI	ACGGC	1 cut(s)	347
BciT130I	CCWGG	3 cut(s)	80, 349, 842
BcnI	CCSGG	2 cut(s)	200, 377
BcoDI	GTCTC	3 cut(s)	139, 170, 1094
BfaI	CTAG	2 cut(s)	45, 872
BfmI	CTRYAG	1 cut(s)	1071
BfoI	RGCGCY	2 cut(s)	449, 926
BfrI	CTTAAG	2 cut(s)	707, 824
BisI	GCNGC	3 cut(s)	449, 911, 1071
BlsI	GCNGC	3 cut(s)	450, 912, 1072
BmcAI	AGTACT	3 cut(s)	16, 881, 1077
Bme1390I	CCNGG	5 cut(s)	80, 200, 349, 377, 842
Bme18I	GGWCC	3 cut(s)	82, 159, 604
BmeT110I	CYCGRG	1 cut(s)	1356
BmgBI	CACGTC	2 cut(s)	340, 592
BmgT120I	GGNCC	3 cut(s)	82, 159, 604
BmiI	GGNNCC	2 cut(s)	161, 635
BmrFI	CCNGG	5 cut(s)	80, 200, 349, 377, 842
BmsI	GCATC	2 cut(s)	842, 1200
BplI	GAGNNNNNCTC	2 cut(s)	1304, 1336
Bpu10I	CCTNAGC	1 cut(s)	1016
BpuEI	CTTGAG	4 cut(s)	605, 665, 1118, 1181
BpuMI	CCSGG	2 cut(s)	200, 377
BsaAI	YACGTR	1 cut(s)	516
BsaHI	GRCGYC	1 cut(s)	210
BsaJI	CCNNGG	3 cut(s)	348, 552, 840
BsaWI	WCCGGW	1 cut(s)	426
BsaXI	ACNNNNNCTCC	4 cut(s)	317, 329, 347, 359
Bsc4I	CCNNNNNNNGG	5 cut(s)	144, 199, 433, 555, 613
Bse118I	RCCGGY	1 cut(s)	535
Bse1I	ACTGG	2 cut(s)	12, 1172
BseAI	TCCGGA	1 cut(s)	426
BseBI	CCWGG	3 cut(s)	80, 349, 842
BseDI	CCNNGG	3 cut(s)	348, 552, 840
BseGI	GGATG	5 cut(s)	117, 267, 564, 678, 1322
BseLI	CCNNNNNNNGG	5 cut(s)	144, 199, 433, 555, 613
BseMII	CTCAG	5 cut(s)	473, 497, 779, 827, 1030
BseNI	ACTGG	2 cut(s)	12, 1172
BseRI	GAGGAG	1 cut(s)	1374
BseSI	GKGCMC	2 cut(s)	638, 870
BseXI	GCAGC	2 cut(s)	897, 1057
Bsh1236I	CGCG	5 cut(s)	261, 370, 382, 451, 530
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	2 cut(s)	116, 548
BshNI	GGYRCC	1 cut(s)	633
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	3 cut(s)	390, 566, 870
BsiHKCI	CYCGRG	1 cut(s)	1356
BsiSI	CCGG	4 cut(s)	200, 376, 427, 536
BsiWI	CGTACG	1 cut(s)	516
BslFI	GGGAC	2 cut(s)	145, 1074
BslI	CCNNNNNNNGG	5 cut(s)	144, 199, 433, 555, 613
BsmAI	GTCTC	3 cut(s)	139, 170, 1094
BsmBI	CGTCTC	2 cut(s)	139, 170
BsmFI	GGGAC	2 cut(s)	145, 1074
BsmI	GAATGC	1 cut(s)	835
BsnI	GGCC	2 cut(s)	116, 548
BsoBI	CYCGRG	1 cut(s)	1356
Bsp1286I	GDGCHC	4 cut(s)	390, 566, 638, 870
Bsp13I	TCCGGA	1 cut(s)	426
BspACI	CCGC	7 cut(s)	139, 238, 259, 274, 301, 360, 449
BspANI	GGCC	2 cut(s)	116, 548
BspCNI	CTCAG	5 cut(s)	474, 498, 780, 826, 1029
BspEI	TCCGGA	1 cut(s)	426
BspFNI	CGCG	5 cut(s)	261, 370, 382, 451, 530
BspLI	GGNNCC	2 cut(s)	161, 635
BspMAI	CTGCAG	1 cut(s)	1075
BspPI	GGATC	5 cut(s)	144, 684, 925, 1234, 1384
BspT107I	GGYRCC	1 cut(s)	633
BspTI	CTTAAG	2 cut(s)	707, 824
BsrFI	RCCGGY	1 cut(s)	535
BsrI	ACTGG	2 cut(s)	12, 1172
BssAI	RCCGGY	1 cut(s)	535
BssECI	CCNNGG	3 cut(s)	348, 552, 840
BssNAI	GTATAC	1 cut(s)	1044
BssNI	GRCGYC	1 cut(s)	210
BssSI	CACGAG	1 cut(s)	229
Bst1107I	GTATAC	1 cut(s)	1044
Bst2BI	CACGAG	1 cut(s)	229
Bst2UI	CCWGG	3 cut(s)	80, 349, 842
Bst4CI	ACNGT	3 cut(s)	553, 740, 757
Bst6I	CTCTTC	1 cut(s)	200
BstACI	GRCGYC	1 cut(s)	210
BstAFI	CTTAAG	2 cut(s)	707, 824
BstBAI	YACGTR	1 cut(s)	516
BstC8I	GCNNGC	2 cut(s)	537, 541
BstDEI	CTNAG	7 cut(s)	109, 482, 506, 788, 813, 1016, 1024
BstDSI	CCRYGG	1 cut(s)	552
BstF5I	GGATG	5 cut(s)	117, 267, 564, 678, 1322
BstFNI	CGCG	5 cut(s)	261, 370, 382, 451, 530
BstH2I	RGCGCY	2 cut(s)	449, 926
BstHHI	GCGC	6 cut(s)	263, 357, 372, 382, 448, 925
BstMAI	GTCTC	3 cut(s)	139, 170, 1094
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	2 cut(s)	536, 545
BstNI	CCWGG	3 cut(s)	80, 349, 842
BstSCI	CCNGG	5 cut(s)	78, 198, 347, 375, 840
BstSFI	CTRYAG	1 cut(s)	1071
BstSLI	GKGCMC	2 cut(s)	638, 870
BstUI	CGCG	5 cut(s)	261, 370, 382, 451, 530
BstV1I	GCAGC	2 cut(s)	897, 1057
BstX2I	RGATCY	1 cut(s)	1376
BstYI	RGATCY	1 cut(s)	1376
BstZ17I	GTATAC	1 cut(s)	1044
BsuRI	GGCC	2 cut(s)	116, 548
BtgI	CCRYGG	1 cut(s)	552
BtrI	CACGTC	2 cut(s)	340, 592
BtsCI	GGATG	5 cut(s)	117, 267, 564, 678, 1322
BtsIMutI	CAGTG	1 cut(s)	753
Cac8I	GCNNGC	2 cut(s)	537, 541
CfoI	GCGC	6 cut(s)	263, 357, 372, 382, 448, 925
Cfr10I	RCCGGY	1 cut(s)	535
Cfr13I	GGNCC	3 cut(s)	82, 159, 604
CseI	GACGC	1 cut(s)	218
Csp6I	GTAC	5 cut(s)	15, 418, 517, 880, 1076
CspCI	CAANNNNNGTGG	2 cut(s)	938, 973
CviAII	CATG	2 cut(s)	544, 1066
CviQI	GTAC	5 cut(s)	15, 418, 517, 880, 1076
DdeI	CTNAG	7 cut(s)	109, 482, 506, 788, 813, 1016, 1024
EaeI	YGGCCR	1 cut(s)	546
Eam1104I	CTCTTC	1 cut(s)	200
EarI	CTCTTC	1 cut(s)	200
EciI	GGCGGA	3 cut(s)	263, 290, 349
Ecl136II	GAGCTC	2 cut(s)	388, 564
Eco24I	GRGCYC	2 cut(s)	390, 566
Eco47I	GGWCC	3 cut(s)	82, 159, 604
Eco53kI	GAGCTC	2 cut(s)	388, 564
Eco88I	CYCGRG	1 cut(s)	1356
EcoICRI	GAGCTC	2 cut(s)	388, 564
EcoRII	CCWGG	3 cut(s)	78, 347, 840
EcoT22I	ATGCAT	1 cut(s)	835
EcoT38I	GRGCYC	2 cut(s)	390, 566
Esp3I	CGTCTC	2 cut(s)	139, 170
FaeI	CATG	2 cut(s)	547, 1069
FaqI	GGGAC	2 cut(s)	145, 1074
FatI	CATG	2 cut(s)	543, 1065
FauI	CCCGC	1 cut(s)	146
FblI	GTMKAC	3 cut(s)	255, 342, 1043
Fnu4HI	GCNGC	3 cut(s)	449, 911, 1071
FokI	GGATG	5 cut(s)	104, 254, 571, 685, 1309
FriOI	GRGCYC	2 cut(s)	390, 566
Fsp4HI	GCNGC	3 cut(s)	449, 911, 1071
FspBI	CTAG	2 cut(s)	45, 872
GlaI	GCGC	6 cut(s)	262, 356, 371, 381, 447, 924
GluI	GCNGC	3 cut(s)	449, 911, 1071
HaeII	RGCGCY	2 cut(s)	449, 926
HaeIII	GGCC	2 cut(s)	116, 548
HapII	CCGG	4 cut(s)	200, 376, 427, 536
HgaI	GACGC	1 cut(s)	218
HhaI	GCGC	6 cut(s)	263, 357, 372, 382, 448, 925
Hin1I	GRCGYC	1 cut(s)	210
Hin1II	CATG	2 cut(s)	547, 1069
Hin6I	GCGC	6 cut(s)	261, 355, 370, 380, 446, 923
HinP1I	GCGC	6 cut(s)	261, 355, 370, 380, 446, 923
HincII	GTYRAC	3 cut(s)	205, 256, 343
HindII	GTYRAC	3 cut(s)	205, 256, 343
HinfI	GANTC	8 cut(s)	100, 344, 502, 887, 983, 1108, 1179, 1194
HpaII	CCGG	4 cut(s)	200, 376, 427, 536
HphI	GGTGA	1 cut(s)	580
Hpy166II	GTNNAC	6 cut(s)	205, 256, 343, 868, 1044, 1148
Hpy188I	TCNGA	5 cut(s)	105, 288, 507, 681, 1231
Hpy188III	TCNNGA	8 cut(s)	68, 229, 427, 584, 644, 1097, 1112, 1358
Hpy8I	GTNNAC	6 cut(s)	205, 256, 343, 868, 1044, 1148
Hpy99I	CGWCG	4 cut(s)	74, 212, 257, 344
HpyAV	CCTTC	3 cut(s)	181, 307, 1130
HpyCH4III	ACNGT	3 cut(s)	553, 740, 757
HpyCH4IV	ACGT	4 cut(s)	339, 515, 519, 591
HpyCH4V	TGCA	5 cut(s)	801, 833, 868, 949, 1073
HpyF10VI	GCNNNNNNNGC	2 cut(s)	536, 545
HpyF3I	CTNAG	7 cut(s)	109, 482, 506, 788, 813, 1016, 1024
HpySE526I	ACGT	4 cut(s)	339, 515, 519, 591
Hsp92I	GRCGYC	1 cut(s)	210
Hsp92II	CATG	2 cut(s)	547, 1069
HspAI	GCGC	6 cut(s)	261, 355, 370, 380, 446, 923
Kpn2I	TCCGGA	1 cut(s)	426
KroI	GCCGGC	1 cut(s)	535
KroNI	GCCGGC	1 cut(s)	537
LmnI	GCTCC	5 cut(s)	362, 429, 616, 655, 1011
Lsp1109I	GCAGC	2 cut(s)	897, 1057
LweI	GCATC	2 cut(s)	842, 1200
MaeI	CTAG	2 cut(s)	45, 872
MaeII	ACGT	4 cut(s)	339, 515, 519, 591
MaeIII	GTNAC	5 cut(s)	226, 364, 452, 1249, 1369
MboII	GAAGA	6 cut(s)	187, 394, 449, 828, 1244, 1371
MflI	RGATCY	1 cut(s)	1376
MhlI	GDGCHC	4 cut(s)	390, 566, 638, 870
MlsI	TGGCCA	1 cut(s)	548
MluCI	AATT	6 cut(s)	21, 280, 682, 952, 1217, 1243
MluNI	TGGCCA	1 cut(s)	548
MlyI	GAGTC	3 cut(s)	338, 511, 1188
MmeI	TCCRAC	1 cut(s)	128
Mox20I	TGGCCA	1 cut(s)	548
Mph1103I	ATGCAT	1 cut(s)	835
MroI	TCCGGA	1 cut(s)	426
MroNI	GCCGGC	1 cut(s)	535
MscI	TGGCCA	1 cut(s)	548
MseI	TTAA	6 cut(s)	708, 825, 858, 942, 1163, 1206
Msp20I	TGGCCA	1 cut(s)	548
MspCI	CTTAAG	2 cut(s)	707, 824
MspI	CCGG	4 cut(s)	200, 376, 427, 536
MspR9I	CCNGG	5 cut(s)	80, 200, 349, 377, 842
Mva1269I	GAATGC	1 cut(s)	835
MvaI	CCWGG	3 cut(s)	80, 349, 842
MvnI	CGCG	5 cut(s)	261, 370, 382, 451, 530
MwoI	GCNNNNNNNGC	2 cut(s)	536, 545
NaeI	GCCGGC	1 cut(s)	537
NciI	CCSGG	2 cut(s)	200, 377
NgoMIV	GCCGGC	1 cut(s)	535
NlaIII	CATG	2 cut(s)	547, 1069
NlaIV	GGNNCC	2 cut(s)	161, 635
NmeAIII	GCCGAG	1 cut(s)	271
NmuCI	GTSAC	4 cut(s)	226, 364, 452, 1249
NsiI	ATGCAT	1 cut(s)	835
PaeR7I	CTCGAG	1 cut(s)	1356
PcsI	WCGNNNNNNNCGW	4 cut(s)	66, 249, 448, 572
PctI	GAATGC	1 cut(s)	835
PdiI	GCCGGC	1 cut(s)	537
PfeI	GAWTC	5 cut(s)	100, 887, 983, 1108, 1179
Pfl23II	CGTACG	1 cut(s)	516
PkrI	GCNGC	3 cut(s)	450, 912, 1072
PleI	GAGTC	3 cut(s)	338, 510, 1188
PpsI	GAGTC	3 cut(s)	338, 510, 1188
Ppu21I	YACGTR	1 cut(s)	516
Psp124BI	GAGCTC	2 cut(s)	390, 566
Psp6I	CCWGG	3 cut(s)	78, 347, 840
PspGI	CCWGG	3 cut(s)	78, 347, 840
PspLI	CGTACG	1 cut(s)	516
PspN4I	GGNNCC	2 cut(s)	161, 635
PspPI	GGNCC	3 cut(s)	82, 159, 604
PstI	CTGCAG	1 cut(s)	1075
PsuI	RGATCY	1 cut(s)	1376
RsaI	GTAC	5 cut(s)	16, 419, 518, 881, 1077
RsaNI	GTAC	5 cut(s)	15, 418, 517, 880, 1076
SacI	GAGCTC	2 cut(s)	390, 566
SalI	GTCGAC	2 cut(s)	254, 341
SaqAI	TTAA	6 cut(s)	708, 825, 858, 942, 1163, 1206
SatI	GCNGC	3 cut(s)	449, 911, 1071
Sau96I	GGNCC	3 cut(s)	82, 159, 604
ScaI	AGTACT	3 cut(s)	16, 881, 1077
SchI	GAGTC	3 cut(s)	338, 511, 1188
ScrFI	CCNGG	5 cut(s)	80, 200, 349, 377, 842
SduI	GDGCHC	4 cut(s)	390, 566, 638, 870
SfaNI	GCATC	2 cut(s)	842, 1200
SfcI	CTRYAG	1 cut(s)	1071
Sfr274I	CTCGAG	1 cut(s)	1356
SinI	GGWCC	3 cut(s)	82, 159, 604
SlaI	CTCGAG	1 cut(s)	1356
SmlI	CTYRAG	7 cut(s)	584, 644, 707, 824, 1097, 1196, 1356
SmoI	CTYRAG	7 cut(s)	584, 644, 707, 824, 1097, 1196, 1356
Sse9I	AATT	6 cut(s)	21, 280, 682, 952, 1217, 1243
SsiI	CCGC	7 cut(s)	139, 238, 259, 274, 301, 360, 449
SspMI	CTAG	2 cut(s)	45, 872
SstI	GAGCTC	2 cut(s)	390, 566
StyD4I	CCNGG	5 cut(s)	78, 198, 347, 375, 840
TaaI	ACNGT	3 cut(s)	553, 740, 757
TaiI	ACGT	4 cut(s)	342, 518, 522, 594
TasI	AATT	6 cut(s)	21, 280, 682, 952, 1217, 1243
TatI	WGTACW	3 cut(s)	14, 879, 1075
TauI	GCSGC	1 cut(s)	451
TfiI	GAWTC	5 cut(s)	100, 887, 983, 1108, 1179
Tru1I	TTAA	6 cut(s)	708, 825, 858, 942, 1163, 1206
Tru9I	TTAA	6 cut(s)	708, 825, 858, 942, 1163, 1206
TscAI	CASTG	1 cut(s)	760
TseFI	GTSAC	4 cut(s)	226, 364, 452, 1249
TseI	GCWGC	2 cut(s)	910, 1070
Tsp45I	GTSAC	4 cut(s)	226, 364, 452, 1249
TspDTI	ATGAA	4 cut(s)	301, 394, 842, 1251
TspGWI	ACGGA	2 cut(s)	617, 1048
TspRI	CASTG	1 cut(s)	760
Vha464I	CTTAAG	2 cut(s)	707, 824
VneI	GTGCAC	1 cut(s)	866
VpaK11BI	GGWCC	3 cut(s)	82, 159, 604
XapI	RAATTY	3 cut(s)	21, 682, 1217
XhoI	CTCGAG	1 cut(s)	1356
XmiI	GTMKAC	3 cut(s)	255, 342, 1043
XspI	CTAG	2 cut(s)	45, 872
ZrmI	AGTACT	3 cut(s)	16, 881, 1077
Zsp2I	ATGCAT	1 cut(s)	835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.