pycom09g08060

Kelch repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
6175422 .. 6180151
4730 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g08060.6

Sequence Viewer

Length: 1290 bp
ATGGTTAGGCCCTCCGCGAAGCACACATCGGCTCGGCTGCTGTTGATATGCGTCGCTCTGCTGGGGATTGCTCTGATTGCCGATTTCCTGTGGGCTTCCTCTCCTCGCTTTATCCGTTCTTATAACGACATTACCGACAATTGGGCTCCTCCTGTCGATATCTCAAAACCCACTATCATCCCCTCCCCCAAGAAAACTAGCCATGAAACCCCCACCAAGGGAAGCGTCAATTACAAAAACGATACTGCTCCTGGAAGAGTTTTATCAGCAACCTTTGCTGATTTGCCTGGACCAGAATTAAAATGGGAAAGTATGGCTGAGGCACCCGTACCTCGTTTGGATGGAGCTGCTATACAGATAAAGAATCTTCTCTTCGTGTTTGCTGGATACGGTACCATTGATTATGTCCATTCGCATGTTGATATGTACAATTTCAGTGATAACAAATGGGGAGAAAGATTTGATATGCCAAAAGAAATGGCACATTCACATCTAGGAATGGTAACCGACGGAAGGTACATATACATTGTCACAGGACAGTATGGGCCACAGTGCAGAGGGCCCACAGCTCATACGTTTGTGCTTGATACTGAGACAAAGCAGTGGCGGGACATGCCTCCTCTGCCAGTTCCTAGGTATGCACCAGCAACGCAACTTTGGAAAGGTAGACTACATGTAATGGGTGGTAGTGGGGAGAACCGATATACACCTGAAGTGGACCATTGGAGTCTTGCTGTAAAAGATGGGAAAGTATTAGAAAAGGAATGGAGGACTGAAATTCCTATTCCCCGGGGAGGACCTCATAGGGCTTGTGTAGTTGTTGATGATCGTCTTTATCTTATCGGTGGTCAAGAGGGTGATTTCATGGCCAAACCCGGATCACCTATTTTCAAGTGCTCTCGTAGGAATGAGGTTGTATATAGTGATGTTTACATGATGGATGACGAAATGAAGTGGAAGGAGTTGCCTCCCATGCCTAAACCAGATTCCCATATTGAATTCGCTTGGACTGTTGTTAACAACTCTATTGTTATCGTTGGAGGCACAACTGAGAAGCACCCTGTAACTAAGAAGATGACTTTGGTTGGTGAAATATTCCAGTTCAACTTGAATACACCGAAGTGGTCAGTTATTGGGAAACTTCCATTTCGAGTTAAAACCACACTAGTTGGTTTCTGGAATGGGTGGTTGTATTTTACATCCGGACAGCGAGACAAAGGACCGGATAATCCCCAACCAAAGAAGGTCATCGGAGAGTTGTGGAGAACGAAATTAAAACTGAACTCGTGA

Protein Analysis

430

Amino Acids

48.42

Weight (kDa)

9.08

Isoelectric Point (pI)

29.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 123
Acc65I GGTACC 1 cut(s) 392
AccB1I GGYRCC 2 cut(s) 322, 392
AccI GTMKAC 1 cut(s) 667
AccII CGCG 1 cut(s) 17
AccIII TCCGGA 1 cut(s) 1202
AciI CCGC 2 cut(s) 15, 607
AclWI GGATC 1 cut(s) 886
AcoI YGGCCR 1 cut(s) 867
AcsI RAATTY 2 cut(s) 777, 998
AcuI CTGAAG 1 cut(s) 732
AfaI GTAC 4 cut(s) 330, 394, 428, 518
AfiI CCNNNNNNNGG 5 cut(s) 141, 217, 218, 513, 794
AflIII ACRYGT 1 cut(s) 673
AgsI TTSAA 4 cut(s) 892, 998, 1105, 1111
AhlI ACTAGT 1 cut(s) 1165
AjnI CCWGG 2 cut(s) 250, 286
AjuI GAANNNNNNNTTGG 2 cut(s) 1064, 1096
AleI CACNNNNGTG 1 cut(s) 1120
AluBI AGCT 2 cut(s) 347, 569
AluI AGCT 2 cut(s) 347, 569
Alw21I GWGCWC 1 cut(s) 899
Alw26I GTCTC 2 cut(s) 587, 1206
AlwI GGATC 1 cut(s) 886
Ama87I CYCGRG 1 cut(s) 789
Aor13HI TCCGGA 1 cut(s) 1202
AoxI GGCC 4 cut(s) 8, 545, 560, 867
ApaI GGGCCC 1 cut(s) 564
ApeKI GCWGC 2 cut(s) 37, 347
ApoI RAATTY 2 cut(s) 777, 998
Asp718I GGTACC 1 cut(s) 392
AspA2I CCTAGG 1 cut(s) 632
AspS9I GGNCC 8 cut(s) 9, 290, 545, 560, 561, 718, 797, 1220
AsuC2I CCSGG 3 cut(s) 790, 791, 876
AsuHPI GGTGA 3 cut(s) 869, 873, 1100
AvaI CYCGRG 1 cut(s) 789
AvaII GGWCC 4 cut(s) 290, 718, 797, 1220
AvrII CCTAGG 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 564
BalI TGGCCA 1 cut(s) 869
BanI GGYRCC 2 cut(s) 322, 392
BanII GRGCYC 2 cut(s) 148, 564
BauI CACGAG 1 cut(s) 1285
Bbv12I GWGCWC 1 cut(s) 899
BbvCI CCTCAGC 1 cut(s) 318
BbvI GCAGC 2 cut(s) 24, 334
BccI CCATC 3 cut(s) 335, 737, 931
BciT130I CCWGG 2 cut(s) 252, 288
BciVI GTATCC 1 cut(s) 380
BcnI CCSGG 3 cut(s) 790, 791, 876
BcoDI GTCTC 2 cut(s) 587, 1206
BcuI ACTAGT 1 cut(s) 1165
BfaI CTAG 4 cut(s) 198, 494, 633, 1166
BfuI GTATCC 1 cut(s) 380
BisI GCNGC 2 cut(s) 38, 348
BlnI CCTAGG 1 cut(s) 632
BlsI GCNGC 2 cut(s) 39, 349
Bme1390I CCNGG 5 cut(s) 252, 288, 790, 791, 876
Bme18I GGWCC 4 cut(s) 290, 718, 797, 1220
BmeT110I CYCGRG 1 cut(s) 789
BmgT120I GGNCC 8 cut(s) 9, 290, 545, 560, 561, 718, 797, 1220
BmiI GGNNCC 4 cut(s) 147, 324, 394, 562
BmrFI CCNGG 5 cut(s) 252, 288, 790, 791, 876
Bpu10I CCTNAGC 1 cut(s) 318
BpuMI CCSGG 3 cut(s) 790, 791, 876
BsaJI CCNNGG 5 cut(s) 216, 632, 788, 789, 790
BsaWI WCCGGW 2 cut(s) 1202, 1222
Bsc4I CCNNNNNNNGG 5 cut(s) 141, 217, 218, 513, 794
Bse1I ACTGG 2 cut(s) 626, 1099
BseAI TCCGGA 1 cut(s) 1202
BseBI CCWGG 2 cut(s) 252, 288
BseDI CCNNGG 5 cut(s) 216, 632, 788, 789, 790
BseGI GGATG 4 cut(s) 177, 346, 946, 1199
BseLI CCNNNNNNNGG 5 cut(s) 141, 217, 218, 513, 794
BseMII CTCAG 3 cut(s) 309, 582, 1041
BseNI ACTGG 2 cut(s) 626, 1099
BseRI GAGGAG 3 cut(s) 93, 138, 609
BseSI GKGCMC 1 cut(s) 564
BseXI GCAGC 2 cut(s) 24, 334
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 1 cut(s) 574
Bsh1236I CGCG 1 cut(s) 17
BshFI GGCC 4 cut(s) 10, 547, 562, 869
BshNI GGYRCC 2 cut(s) 322, 392
BsiHKAI GWGCWC 1 cut(s) 899
BsiHKCI CYCGRG 1 cut(s) 789
BsiSI CCGG 4 cut(s) 790, 876, 1203, 1223
BslFI GGGAC 1 cut(s) 623
BslI CCNNNNNNNGG 5 cut(s) 141, 217, 218, 513, 794
BsmAI GTCTC 2 cut(s) 587, 1206
BsmFI GGGAC 1 cut(s) 623
BsnI GGCC 4 cut(s) 10, 547, 562, 869
BsoBI CYCGRG 1 cut(s) 789
Bsp120I GGGCCC 1 cut(s) 560
Bsp1286I GDGCHC 3 cut(s) 148, 564, 899
Bsp13I TCCGGA 1 cut(s) 1202
Bsp1407I TGTACA 1 cut(s) 426
Bsp143I GATC 2 cut(s) 826, 878
BspACI CCGC 2 cut(s) 15, 607
BspANI GGCC 4 cut(s) 10, 547, 562, 869
BspCNI CTCAG 3 cut(s) 310, 583, 1042
BspEI TCCGGA 1 cut(s) 1202
BspFNI CGCG 1 cut(s) 17
BspLI GGNNCC 4 cut(s) 147, 324, 394, 562
BspPI GGATC 1 cut(s) 886
BspT107I GGYRCC 2 cut(s) 322, 392
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 2 cut(s) 626, 1099
BssECI CCNNGG 5 cut(s) 216, 632, 788, 789, 790
BssMI GATC 2 cut(s) 826, 878
BssSI CACGAG 1 cut(s) 1285
BssT1I CCWWGG 2 cut(s) 216, 632
Bst2BI CACGAG 1 cut(s) 1285
Bst2UI CCWGG 2 cut(s) 252, 288
Bst4CI ACNGT 4 cut(s) 392, 540, 552, 1012
Bst6I CTCTTC 2 cut(s) 250, 377
BstAPI GCANNNNNTGC 1 cut(s) 275
BstAUI TGTACA 1 cut(s) 426
BstDEI CTNAG 4 cut(s) 318, 591, 1050, 1068
BstEII GGTNACC 1 cut(s) 502
BstF5I GGATG 4 cut(s) 177, 346, 946, 1199
BstFNI CGCG 1 cut(s) 17
BstKTI GATC 2 cut(s) 829, 881
BstMAI GTCTC 2 cut(s) 587, 1206
BstMBI GATC 2 cut(s) 826, 878
BstMWI GCNNNNNNNGC 5 cut(s) 77, 275, 613, 622, 973
BstNI CCWGG 2 cut(s) 252, 288
BstNSI RCATGY 3 cut(s) 419, 616, 677
BstPI GGTNACC 1 cut(s) 502
BstSCI CCNGG 5 cut(s) 250, 286, 788, 789, 874
BstSLI GKGCMC 1 cut(s) 564
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 2 cut(s) 24, 334
BsuI GTATCC 1 cut(s) 380
BsuRI GGCC 4 cut(s) 10, 547, 562, 869
BtsCI GGATG 4 cut(s) 177, 346, 946, 1199
BtsI GCAGTG 1 cut(s) 608
BtsIMutI CAGTG 3 cut(s) 442, 557, 608
Cfr13I GGNCC 8 cut(s) 9, 290, 545, 560, 561, 718, 797, 1220
Cfr9I CCCGGG 1 cut(s) 789
CseI GACGC 2 cut(s) 40, 214
Csp6I GTAC 4 cut(s) 329, 393, 427, 517
CspCI CAANNNNNGTGG 2 cut(s) 1150, 1185
CviAII CATG 7 cut(s) 203, 416, 613, 674, 865, 934, 973
CviQI GTAC 4 cut(s) 329, 393, 427, 517
DdeI CTNAG 4 cut(s) 318, 591, 1050, 1068
DpnI GATC 2 cut(s) 828, 880
DpnII GATC 2 cut(s) 826, 878
EaeI YGGCCR 1 cut(s) 867
Eam1104I CTCTTC 2 cut(s) 250, 377
EarI CTCTTC 2 cut(s) 250, 377
Eco130I CCWWGG 2 cut(s) 216, 632
Eco24I GRGCYC 2 cut(s) 148, 564
Eco32I GATATC 1 cut(s) 160
Eco47I GGWCC 4 cut(s) 290, 718, 797, 1220
Eco57I CTGAAG 1 cut(s) 732
Eco88I CYCGRG 1 cut(s) 789
Eco91I GGTNACC 1 cut(s) 502
EcoO109I RGGNCCY 3 cut(s) 9, 560, 797
EcoO65I GGTNACC 1 cut(s) 502
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 2 cut(s) 250, 286
EcoRV GATATC 1 cut(s) 160
EcoT14I CCWWGG 2 cut(s) 216, 632
EcoT38I GRGCYC 2 cut(s) 148, 564
ErhI CCWWGG 2 cut(s) 216, 632
FaeI CATG 7 cut(s) 206, 419, 616, 677, 868, 937, 976
FaqI GGGAC 1 cut(s) 623
FatI CATG 7 cut(s) 202, 415, 612, 673, 864, 933, 972
FauI CCCGC 1 cut(s) 600
FblI GTMKAC 1 cut(s) 667
Fnu4HI GCNGC 2 cut(s) 38, 348
FokI GGATG 4 cut(s) 164, 353, 953, 1186
FriOI GRGCYC 2 cut(s) 148, 564
Fsp4HI GCNGC 2 cut(s) 38, 348
FspBI CTAG 4 cut(s) 198, 494, 633, 1166
GluI GCNGC 2 cut(s) 38, 348
GsaI CCCAGC 1 cut(s) 65
HaeIII GGCC 4 cut(s) 10, 547, 562, 869
HapII CCGG 4 cut(s) 790, 876, 1203, 1223
HgaI GACGC 2 cut(s) 40, 214
Hin1II CATG 7 cut(s) 206, 419, 616, 677, 868, 937, 976
HincII GTYRAC 1 cut(s) 1018
HindII GTYRAC 1 cut(s) 1018
HinfI GANTC 3 cut(s) 364, 727, 986
HpaI GTTAAC 1 cut(s) 1018
HpaII CCGG 4 cut(s) 790, 876, 1203, 1223
HphI GGTGA 3 cut(s) 869, 873, 1100
Hpy166II GTNNAC 4 cut(s) 668, 718, 931, 1018
Hpy188I TCNGA 2 cut(s) 75, 1253
Hpy188III TCNNGA 4 cut(s) 851, 1177, 1203, 1287
Hpy8I GTNNAC 4 cut(s) 668, 718, 931, 1018
Hpy99I CGWCG 2 cut(s) 56, 512
HpyAV CCTTC 3 cut(s) 507, 952, 1237
HpyCH4III ACNGT 4 cut(s) 392, 540, 552, 1012
HpyCH4IV ACGT 1 cut(s) 575
HpyCH4V TGCA 2 cut(s) 555, 641
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 275, 613, 622, 973
HpyF3I CTNAG 4 cut(s) 318, 591, 1050, 1068
HpySE526I ACGT 1 cut(s) 575
Hsp92II CATG 7 cut(s) 206, 419, 616, 677, 868, 937, 976
Kpn2I TCCGGA 1 cut(s) 1202
KpnI GGTACC 1 cut(s) 396
KspAI GTTAAC 1 cut(s) 1018
Kzo9I GATC 2 cut(s) 826, 878
LmnI GCTCC 3 cut(s) 151, 253, 344
Lsp1109I GCAGC 2 cut(s) 24, 334
MaeI CTAG 4 cut(s) 198, 494, 633, 1166
MaeII ACGT 1 cut(s) 575
MaeIII GTNAC 3 cut(s) 502, 529, 1063
MalI GATC 2 cut(s) 828, 880
MboI GATC 2 cut(s) 826, 878
MboII GAAGA 4 cut(s) 267, 359, 364, 1084
MfeI CAATTG 1 cut(s) 139
MhlI GDGCHC 3 cut(s) 148, 564, 899
MlsI TGGCCA 1 cut(s) 869
MluCI AATT 7 cut(s) 139, 229, 296, 430, 777, 998, 1271
MluNI TGGCCA 1 cut(s) 869
MlyI GAGTC 1 cut(s) 736
MmeI TCCRAC 1 cut(s) 1018
Mox20I TGGCCA 1 cut(s) 869
MroI TCCGGA 1 cut(s) 1202
MscI TGGCCA 1 cut(s) 869
MseI TTAA 4 cut(s) 299, 1017, 1155, 1274
MslI CAYNNNNRTG 2 cut(s) 414, 1120
Msp20I TGGCCA 1 cut(s) 869
MspI CCGG 4 cut(s) 790, 876, 1203, 1223
MspR9I CCNGG 5 cut(s) 252, 288, 790, 791, 876
MunI CAATTG 1 cut(s) 139
MvaI CCWGG 2 cut(s) 252, 288
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 5 cut(s) 77, 275, 613, 622, 973
NciI CCSGG 3 cut(s) 790, 791, 876
NdeII GATC 2 cut(s) 826, 878
NlaIII CATG 7 cut(s) 206, 419, 616, 677, 868, 937, 976
NlaIV GGNNCC 4 cut(s) 147, 324, 394, 562
NmeAIII GCCGAG 1 cut(s) 13
NmuCI GTSAC 1 cut(s) 529
NspI RCATGY 3 cut(s) 419, 616, 677
OliI CACNNNNGTG 1 cut(s) 1120
PciI ACATGT 1 cut(s) 673
PcsI WCGNNNNNNNCGW 2 cut(s) 112, 132
PfeI GAWTC 2 cut(s) 364, 986
PfoI TCCNGGA 1 cut(s) 250
PkrI GCNGC 2 cut(s) 39, 349
PleI GAGTC 1 cut(s) 735
PpsI GAGTC 1 cut(s) 735
PpuMI RGGWCCY 1 cut(s) 797
PscI ACATGT 1 cut(s) 673
PsiI TTATAA 1 cut(s) 123
Psp5II RGGWCCY 1 cut(s) 797
Psp6I CCWGG 2 cut(s) 250, 286
PspEI GGTNACC 1 cut(s) 502
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 2 cut(s) 250, 286
PspN4I GGNNCC 4 cut(s) 147, 324, 394, 562
PspOMI GGGCCC 1 cut(s) 560
PspPI GGNCC 8 cut(s) 9, 290, 545, 560, 561, 718, 797, 1220
PspPPI RGGWCCY 1 cut(s) 797
RsaI GTAC 4 cut(s) 330, 394, 428, 518
RsaNI GTAC 4 cut(s) 329, 393, 427, 517
RseI CAYNNNNRTG 2 cut(s) 414, 1120
SaqAI TTAA 4 cut(s) 299, 1017, 1155, 1274
SatI GCNGC 2 cut(s) 38, 348
Sau3AI GATC 2 cut(s) 826, 878
Sau96I GGNCC 8 cut(s) 9, 290, 545, 560, 561, 718, 797, 1220
SchI GAGTC 1 cut(s) 736
ScrFI CCNGG 5 cut(s) 252, 288, 790, 791, 876
SduI GDGCHC 3 cut(s) 148, 564, 899
SinI GGWCC 4 cut(s) 290, 718, 797, 1220
SmaI CCCGGG 1 cut(s) 791
SmiMI CAYNNNNRTG 2 cut(s) 414, 1120
SpeI ACTAGT 1 cut(s) 1165
Sse9I AATT 7 cut(s) 139, 229, 296, 430, 777, 998, 1271
SsiI CCGC 2 cut(s) 15, 607
SspI AATATT 1 cut(s) 1095
SspMI CTAG 4 cut(s) 198, 494, 633, 1166
StyD4I CCNGG 5 cut(s) 250, 286, 788, 789, 874
StyI CCWWGG 2 cut(s) 216, 632
TaaI ACNGT 4 cut(s) 392, 540, 552, 1012
TaiI ACGT 1 cut(s) 578
TaqI TCGA 2 cut(s) 156, 1150
TasI AATT 7 cut(s) 139, 229, 296, 430, 777, 998, 1271
TatI WGTACW 1 cut(s) 426
TfiI GAWTC 2 cut(s) 364, 986
Tru1I TTAA 4 cut(s) 299, 1017, 1155, 1274
Tru9I TTAA 4 cut(s) 299, 1017, 1155, 1274
TscAI CASTG 3 cut(s) 442, 557, 608
TseFI GTSAC 1 cut(s) 529
TseI GCWGC 2 cut(s) 37, 347
Tsp45I GTSAC 1 cut(s) 529
TspDTI ATGAA 3 cut(s) 219, 853, 965
TspGWI ACGGA 2 cut(s) 104, 525
TspMI CCCGGG 1 cut(s) 789
TspRI CASTG 3 cut(s) 442, 557, 608
VpaK11BI GGWCC 4 cut(s) 290, 718, 797, 1220
XapI RAATTY 2 cut(s) 777, 998
XceI RCATGY 3 cut(s) 419, 616, 677
XcmI CCANNNNNNNNNTGG 1 cut(s) 300
XmaI CCCGGG 1 cut(s) 789
XmaJI CCTAGG 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 667
XspI CTAG 4 cut(s) 198, 494, 633, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.