YGGT family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27990 |
| fragaria_vesca | FvH4_6g37080 |
| malus_domestica | MD09G1163500.v1.1 MD17G1164100.v1.1 |
| prunus_persica | Prupe.3G021000_v2.0.a1 |
| pyrus_communis | pycom09g08100 pycom17g15710 |
| rosa_chinensis | RchiOBHm_Chr2g0149631 |
| rosa_laevigata | RLG00000020432 |
| rosa_multiflora | Rmu_sc0014307.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00097850 |
| rosa_rugosa | Rorug02G0413600 |
| rosa_samantha | Rh2AG474000 Rh2BG485800 Rh2CG459900 Rh2DG495100 |
| rosa_wichuraiana | Rw2G038640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 392 |
| AciI | CCGC | 7 cut(s) | 279, 286, 345, 348, 368, 382, 392 |
| AclWI | GGATC | 2 cut(s) | 336, 349 |
| AcsI | RAATTY | 1 cut(s) | 104 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 338, 391, 392 |
| AgsI | TTSAA | 1 cut(s) | 109 |
| AlwI | GGATC | 2 cut(s) | 336, 349 |
| Ama87I | CYCGRG | 1 cut(s) | 385 |
| ApeKI | GCWGC | 1 cut(s) | 288 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| AspLEI | GCGC | 3 cut(s) | 164, 373, 392 |
| AspS9I | GGNCC | 3 cut(s) | 329, 353, 379 |
| AsuHPI | GGTGA | 2 cut(s) | 163, 244 |
| AvaI | CYCGRG | 1 cut(s) | 385 |
| AvaII | GGWCC | 3 cut(s) | 329, 353, 379 |
| BamHI | GGATCC | 1 cut(s) | 341 |
| BbvI | GCAGC | 1 cut(s) | 300 |
| BccI | CCATC | 5 cut(s) | 59, 164, 214, 257, 344 |
| BceAI | ACGGC | 1 cut(s) | 266 |
| BfoI | RGCGCY | 1 cut(s) | 374 |
| BisI | GCNGC | 4 cut(s) | 279, 289, 348, 369 |
| BlsI | GCNGC | 4 cut(s) | 280, 290, 349, 370 |
| Bme18I | GGWCC | 3 cut(s) | 329, 353, 379 |
| BmeT110I | CYCGRG | 1 cut(s) | 385 |
| BmgT120I | GGNCC | 3 cut(s) | 329, 353, 379 |
| BmiI | GGNNCC | 5 cut(s) | 319, 331, 343, 355, 380 |
| BmsI | GCATC | 1 cut(s) | 14 |
| Bpu10I | CCTNAGC | 1 cut(s) | 374 |
| BpuEI | CTTGAG | 1 cut(s) | 6 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 178, 208 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 338, 391, 392 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 338, 391, 392 |
| BseMII | CTCAG | 3 cut(s) | 163, 224, 388 |
| BseXI | GCAGC | 1 cut(s) | 300 |
| Bsh1236I | CGCG | 1 cut(s) | 392 |
| BsiHKCI | CYCGRG | 1 cut(s) | 385 |
| BsiSI | CCGG | 1 cut(s) | 351 |
| BslFI | GGGAC | 1 cut(s) | 392 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 338, 391, 392 |
| BsmFI | GGGAC | 1 cut(s) | 392 |
| BsoBI | CYCGRG | 1 cut(s) | 385 |
| Bsp143I | GATC | 1 cut(s) | 341 |
| BspACI | CCGC | 7 cut(s) | 279, 286, 345, 348, 368, 382, 392 |
| BspCNI | CTCAG | 3 cut(s) | 162, 223, 387 |
| BspFNI | CGCG | 1 cut(s) | 392 |
| BspLI | GGNNCC | 5 cut(s) | 319, 331, 343, 355, 380 |
| BspPI | GGATC | 2 cut(s) | 336, 349 |
| BssMI | GATC | 1 cut(s) | 341 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| Bst6I | CTCTTC | 2 cut(s) | 266, 365 |
| BstDEI | CTNAG | 3 cut(s) | 149, 210, 374 |
| BstFNI | CGCG | 1 cut(s) | 392 |
| BstH2I | RGCGCY | 1 cut(s) | 374 |
| BstHHI | GCGC | 3 cut(s) | 164, 373, 392 |
| BstKTI | GATC | 1 cut(s) | 344 |
| BstMBI | GATC | 1 cut(s) | 341 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 220 |
| BstUI | CGCG | 1 cut(s) | 392 |
| BstV1I | GCAGC | 1 cut(s) | 300 |
| BstX2I | RGATCY | 1 cut(s) | 341 |
| BstYI | RGATCY | 1 cut(s) | 341 |
| CfoI | GCGC | 3 cut(s) | 164, 373, 392 |
| Cfr13I | GGNCC | 3 cut(s) | 329, 353, 379 |
| CviAII | CATG | 1 cut(s) | 13 |
| CviJI | RGCY | 4 cut(s) | 17, 214, 278, 291 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 214, 278, 291 |
| DdeI | CTNAG | 3 cut(s) | 149, 210, 374 |
| DpnI | GATC | 1 cut(s) | 343 |
| DpnII | GATC | 1 cut(s) | 341 |
| Eam1104I | CTCTTC | 2 cut(s) | 266, 365 |
| EarI | CTCTTC | 2 cut(s) | 266, 365 |
| EciI | GGCGGA | 1 cut(s) | 334 |
| Eco47I | GGWCC | 3 cut(s) | 329, 353, 379 |
| Eco88I | CYCGRG | 1 cut(s) | 385 |
| FaeI | CATG | 1 cut(s) | 16 |
| FaiI | YATR | 1 cut(s) | 14 |
| FaqI | GGGAC | 1 cut(s) | 392 |
| FatI | CATG | 1 cut(s) | 12 |
| FauI | CCCGC | 1 cut(s) | 385 |
| Fnu4HI | GCNGC | 4 cut(s) | 279, 289, 348, 369 |
| Fsp4HI | GCNGC | 4 cut(s) | 279, 289, 348, 369 |
| GlaI | GCGC | 3 cut(s) | 163, 372, 391 |
| GluI | GCNGC | 4 cut(s) | 279, 289, 348, 369 |
| HaeII | RGCGCY | 1 cut(s) | 374 |
| HapII | CCGG | 1 cut(s) | 351 |
| HhaI | GCGC | 3 cut(s) | 164, 373, 392 |
| Hin1II | CATG | 1 cut(s) | 16 |
| Hin6I | GCGC | 3 cut(s) | 162, 371, 390 |
| HinP1I | GCGC | 3 cut(s) | 162, 371, 390 |
| HpaII | CCGG | 1 cut(s) | 351 |
| HphI | GGTGA | 2 cut(s) | 163, 244 |
| Hpy188I | TCNGA | 3 cut(s) | 152, 329, 341 |
| Hpy99I | CGWCG | 1 cut(s) | 223 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 220 |
| HpyF3I | CTNAG | 3 cut(s) | 149, 210, 374 |
| Hsp92II | CATG | 1 cut(s) | 16 |
| HspAI | GCGC | 3 cut(s) | 162, 371, 390 |
| Kzo9I | GATC | 1 cut(s) | 341 |
| LpnPI | CCDG | 2 cut(s) | 361, 364 |
| Lsp1109I | GCAGC | 1 cut(s) | 300 |
| LweI | GCATC | 1 cut(s) | 14 |
| MalI | GATC | 1 cut(s) | 343 |
| MboI | GATC | 1 cut(s) | 341 |
| MboII | GAAGA | 5 cut(s) | 22, 25, 73, 253, 352 |
| MflI | RGATCY | 1 cut(s) | 341 |
| MluCI | AATT | 3 cut(s) | 104, 297, 323 |
| MnlI | CCTC | 8 cut(s) | 52, 158, 200, 245, 269, 302, 343, 368 |
| MspI | CCGG | 1 cut(s) | 351 |
| MvnI | CGCG | 1 cut(s) | 392 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 220 |
| NdeII | GATC | 1 cut(s) | 341 |
| NlaIII | CATG | 1 cut(s) | 16 |
| NlaIV | GGNNCC | 5 cut(s) | 319, 331, 343, 355, 380 |
| PkrI | GCNGC | 4 cut(s) | 280, 290, 349, 370 |
| PspN4I | GGNNCC | 5 cut(s) | 319, 331, 343, 355, 380 |
| PspPI | GGNCC | 3 cut(s) | 329, 353, 379 |
| PsuI | RGATCY | 1 cut(s) | 341 |
| SatI | GCNGC | 4 cut(s) | 279, 289, 348, 369 |
| Sau3AI | GATC | 1 cut(s) | 341 |
| Sau96I | GGNCC | 3 cut(s) | 329, 353, 379 |
| SetI | ASST | 2 cut(s) | 44, 237 |
| SfaNI | GCATC | 1 cut(s) | 14 |
| SgeI | CNNG | 9 cut(s) | 25, 35, 229, 255, 317, 322, 363, 388, 397 |
| SinI | GGWCC | 3 cut(s) | 329, 353, 379 |
| SmlI | CTYRAG | 1 cut(s) | 21 |
| SmoI | CTYRAG | 1 cut(s) | 21 |
| Sse9I | AATT | 3 cut(s) | 104, 297, 323 |
| SsiI | CCGC | 7 cut(s) | 279, 286, 345, 348, 368, 382, 392 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TasI | AATT | 3 cut(s) | 104, 297, 323 |
| TauI | GCSGC | 3 cut(s) | 281, 350, 371 |
| TseI | GCWGC | 1 cut(s) | 288 |
| VpaK11BI | GGWCC | 3 cut(s) | 329, 353, 379 |
| XapI | RAATTY | 1 cut(s) | 104 |