pycom09g14820

Serine incorporator

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
14604862 .. 14608340
3479 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g14820.5

Sequence Viewer

Length: 1242 bp
ATGTGGGCAGCTTCGTGCCTGGCATCATGCTGCGCTGCTTGCGCTTGCGATGCTTGCAGGACGGTGGTGTCAAGTATTAGCCGCCGGTCTGCTAGGATTGCATACTGTGGGCTCTTTGCACTTTCTTTGATCGTCTCATGGATTCTCCGCGAGGTTGCGGCTCCTCTCCTGGAAAAGATTCCCTGGATTTCTCAGTTTAATGAGACACATAACAGGGAGTGGTTCGAAACAGATGCAGTGCTTCGTGTTAGCTTGGGGAATTTTCTCTTCTTCACTATTTTATCAGTGATGATGGTTGGTGTGAAGAATCAGAAGGATCCCCGTGATAGTTTGCATCATGGTGGATGGATGATGAAAGTTATATGCTGGTGTCTTTTGGTGATCTTCATGTTTTTCGTACCAAATGAGATTGTTAGCTTCTATGAGACAATTTCCAAGTTTGGCTCAGGATTTTTTCTTCTTGTACAAGTTGTACTTCTGTTGGATTTTGTTCATGGATGGAATGACAAATGGGTTGGATATGATGAGAAGTTCTGGTATGTTGCACTTTTTGTTGTTTCTCTTGTTTGTTATCTGGCAACATTCGTCTTCTCTGGACTTCTTTTCCATTGGTTCACACCATCTGGACAAGACTGCGGGCTCAACACCTTCTTTATTGTCATGACTCTCATGTGTGTCTTCGGGTTTCTTATAGTGGCACTGCATCCTTCGGTAAGTGGCAGCATTTTGCCCGCATCAGTTATATCTATGTACTGCACGTACCTCTGCTACAGTGCACTTGCCAGTGAACCTAGGGACTATGAGTGCAATGGTCTTCACAAGCACTCCAAAGCTGTTTCCACCGGGACCCTTACCTTTGGGTTGCTAACCACTGTTCTTTCTGTGGTTTATTCTGCTGTTCGTGCTGGATCTTCCACAACTCTTCTCTCGCCACCAAGTTCTCCTCGCTCAGGTGCTGGAAAGGCTCTGCTTCCATTAGACAAGGTTGATGAACACGAAGAAAAAGAGAAGTCCAAGCCAGTGTCATATTCATATGCGTTATTCCACATCATCTTCTCTCTTGCTAGTATGTACTCGGCCATGCTTCTGACAGGGTGGTCAGCCTCAGTTGGGGAGAGCGGGAAGTTGGTGGATGTTGGGTGGCCATCTGTGTGGGTGAGGATGGTGACTAGTTGGGCAACTGCAGGTCTGTACATCTGGTCTCTTTTGGCTCCTATTCTGTTCCCCGAGAGGGAATTCTGA

Protein Analysis

414

Amino Acids

45.98

Weight (kDa)

6.78

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 67, 1096
Acc36I ACCTGC 1 cut(s) 1175
AccBSI CCGCTC 1 cut(s) 1119
AccII CGCG 1 cut(s) 150
AciI CCGC 6 cut(s) 82, 148, 158, 636, 732, 1119
AclWI GGATC 3 cut(s) 311, 324, 916
AcoI YGGCCR 2 cut(s) 1077, 1142
AcsI RAATTY 2 cut(s) 259, 1235
AfaI GTAC 7 cut(s) 399, 465, 474, 752, 761, 1073, 1193
AfiI CCNNNNNNNGG 3 cut(s) 950, 1110, 1231
AhlI ACTAGT 1 cut(s) 1169
AjnI CCWGG 3 cut(s) 18, 168, 182
AluBI AGCT 4 cut(s) 11, 252, 417, 833
AluI AGCT 4 cut(s) 11, 252, 417, 833
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 4 cut(s) 139, 197, 419, 1206
Alw44I GTGCAC 1 cut(s) 774
AlwI GGATC 3 cut(s) 311, 324, 916
AlwNI CAGNNNCTG 1 cut(s) 956
Ama87I CYCGRG 1 cut(s) 1226
AoxI GGCC 2 cut(s) 1077, 1142
ApaLI GTGCAC 1 cut(s) 774
ApeKI GCWGC 4 cut(s) 8, 30, 35, 720
ApoI RAATTY 2 cut(s) 259, 1235
Asp700I GAANNNNTTC 1 cut(s) 177
AspA2I CCTAGG 1 cut(s) 791
AspLEI GCGC 2 cut(s) 35, 44
AspS9I GGNCC 1 cut(s) 846
AsuC2I CCSGG 1 cut(s) 844
AsuHPI GGTGA 3 cut(s) 391, 1168, 1177
AsuII TTCGAA 1 cut(s) 225
AvaI CYCGRG 1 cut(s) 1226
AvaII GGWCC 1 cut(s) 846
AvrII CCTAGG 1 cut(s) 791
BaeGI GKGCMC 1 cut(s) 778
BalI TGGCCA 1 cut(s) 1144
BamHI GGATCC 1 cut(s) 316
BanII GRGCYC 2 cut(s) 114, 642
BbsI GAAGAC 3 cut(s) 580, 670, 806
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 4 cut(s) 17, 20, 22, 732
BccI CCATC 6 cut(s) 286, 339, 492, 628, 1153, 1156
BcgI CGANNNNNNTGC 2 cut(s) 215, 249
BciT130I CCWGG 3 cut(s) 20, 170, 184
BcnI CCSGG 1 cut(s) 844
BcoDI GTCTC 4 cut(s) 139, 197, 419, 1206
BcuI ACTAGT 1 cut(s) 1169
BfaI CTAG 4 cut(s) 93, 792, 1065, 1170
BfmI CTRYAG 2 cut(s) 769, 1182
BfuAI ACCTGC 1 cut(s) 1175
BisI GCNGC 6 cut(s) 9, 31, 36, 82, 159, 721
BlnI CCTAGG 1 cut(s) 791
BlsI GCNGC 6 cut(s) 10, 32, 37, 83, 160, 722
Bme1390I CCNGG 4 cut(s) 20, 170, 184, 844
Bme18I GGWCC 1 cut(s) 846
BmeT110I CYCGRG 1 cut(s) 1226
BmgT120I GGNCC 1 cut(s) 846
BmiI GGNNCC 5 cut(s) 162, 318, 847, 848, 1212
BmrFI CCNGG 4 cut(s) 20, 170, 184, 844
BmsI GCATC 6 cut(s) 32, 40, 223, 343, 712, 743
BpiI GAAGAC 3 cut(s) 580, 670, 806
Bpu10I CCTNAGC 2 cut(s) 445, 949
Bpu14I TTCGAA 1 cut(s) 225
BpuMI CCSGG 1 cut(s) 844
BsaAI YACGTR 1 cut(s) 759
BsaI GGTCTC 1 cut(s) 1206
BsaJI CCNNGG 2 cut(s) 182, 791
BsaXI ACNNNNNCTCC 2 cut(s) 809, 839
Bsc4I CCNNNNNNNGG 3 cut(s) 950, 1110, 1231
Bse118I RCCGGY 1 cut(s) 84
Bse1I ACTGG 2 cut(s) 783, 1019
Bse3DI GCAATG 1 cut(s) 814
BseBI CCWGG 3 cut(s) 20, 170, 184
BseDI CCNNGG 2 cut(s) 182, 791
BseGI GGATG 6 cut(s) 350, 354, 503, 703, 1138, 1167
BseLI CCNNNNNNNGG 3 cut(s) 950, 1110, 1231
BseMI GCAATG 1 cut(s) 814
BseMII CTCAG 4 cut(s) 206, 459, 963, 1119
BseNI ACTGG 2 cut(s) 783, 1019
BseRI GAGGAG 2 cut(s) 153, 933
BseSI GKGCMC 1 cut(s) 778
BseXI GCAGC 4 cut(s) 17, 20, 22, 732
BsgI GTGCAG 1 cut(s) 739
Bsh1236I CGCG 1 cut(s) 150
BshFI GGCC 2 cut(s) 1079, 1144
BsiHKAI GWGCWC 1 cut(s) 778
BsiHKCI CYCGRG 1 cut(s) 1226
BsiSI CCGG 2 cut(s) 85, 843
BslFI GGGAC 2 cut(s) 809, 859
BslI CCNNNNNNNGG 3 cut(s) 950, 1110, 1231
BsmAI GTCTC 4 cut(s) 139, 197, 419, 1206
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 2 cut(s) 809, 859
BsnI GGCC 2 cut(s) 1079, 1144
Bso31I GGTCTC 1 cut(s) 1206
BsoBI CYCGRG 1 cut(s) 1226
Bsp119I TTCGAA 1 cut(s) 225
Bsp1286I GDGCHC 3 cut(s) 114, 642, 778
Bsp1407I TGTACA 2 cut(s) 463, 1191
Bsp143I GATC 4 cut(s) 129, 316, 381, 908
BspACI CCGC 6 cut(s) 82, 148, 158, 636, 732, 1119
BspANI GGCC 2 cut(s) 1079, 1144
BspCNI CTCAG 4 cut(s) 205, 458, 962, 1118
BspFNI CGCG 1 cut(s) 150
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 5 cut(s) 162, 318, 847, 848, 1212
BspMAI CTGCAG 1 cut(s) 1186
BspMI ACCTGC 1 cut(s) 1175
BspPI GGATC 3 cut(s) 311, 324, 916
BspT104I TTCGAA 1 cut(s) 225
BspTNI GGTCTC 1 cut(s) 1206
BsrBI CCGCTC 1 cut(s) 1119
BsrDI GCAATG 1 cut(s) 814
BsrFI RCCGGY 1 cut(s) 84
BsrGI TGTACA 2 cut(s) 463, 1191
BsrI ACTGG 2 cut(s) 783, 1019
BssAI RCCGGY 1 cut(s) 84
BssECI CCNNGG 2 cut(s) 182, 791
BssMI GATC 4 cut(s) 129, 316, 381, 908
BssT1I CCWWGG 1 cut(s) 791
Bst2UI CCWGG 3 cut(s) 20, 170, 184
Bst4CI ACNGT 4 cut(s) 64, 107, 773, 874
Bst6I CTCTTC 2 cut(s) 272, 927
BstAUI TGTACA 2 cut(s) 463, 1191
BstBAI YACGTR 1 cut(s) 759
BstBI TTCGAA 1 cut(s) 225
BstC8I GCNNGC 5 cut(s) 40, 46, 55, 638, 732
BstDEI CTNAG 4 cut(s) 192, 445, 949, 1105
BstENI CCTNNNNNAGG 1 cut(s) 948
BstF5I GGATG 6 cut(s) 350, 354, 503, 703, 1138, 1167
BstFNI CGCG 1 cut(s) 150
BstHHI GCGC 2 cut(s) 35, 44
BstKTI GATC 4 cut(s) 132, 319, 384, 911
BstMAI GTCTC 4 cut(s) 139, 197, 419, 1206
BstMBI GATC 4 cut(s) 129, 316, 381, 908
BstMWI GCNNNNNNNGC 7 cut(s) 39, 41, 50, 54, 98, 902, 962
BstNI CCWGG 3 cut(s) 20, 170, 184
BstSCI CCNGG 4 cut(s) 18, 168, 182, 842
BstSFI CTRYAG 2 cut(s) 769, 1182
BstSLI GKGCMC 1 cut(s) 778
BstUI CGCG 1 cut(s) 150
BstV1I GCAGC 4 cut(s) 17, 20, 22, 732
BstV2I GAAGAC 3 cut(s) 580, 670, 806
BstX2I RGATCY 2 cut(s) 316, 908
BstXI CCANNNNNNTGG 1 cut(s) 1152
BstYI RGATCY 2 cut(s) 316, 908
BsuRI GGCC 2 cut(s) 1079, 1144
BtgZI GCGATG 1 cut(s) 63
BtsCI GGATG 6 cut(s) 350, 354, 503, 703, 1138, 1167
BtsI GCAGTG 2 cut(s) 243, 698
BtsIMutI CAGTG 7 cut(s) 243, 291, 698, 778, 790, 870, 1026
BveI ACCTGC 1 cut(s) 1175
Cac8I GCNNGC 5 cut(s) 40, 46, 55, 638, 732
CaiI CAGNNNCTG 1 cut(s) 956
CciI TCATGA 1 cut(s) 660
CfoI GCGC 2 cut(s) 35, 44
Cfr10I RCCGGY 1 cut(s) 84
Cfr13I GGNCC 1 cut(s) 846
Csp6I GTAC 7 cut(s) 398, 464, 473, 751, 760, 1072, 1192
CviAII CATG 8 cut(s) 27, 138, 338, 388, 494, 661, 670, 1081
CviQI GTAC 7 cut(s) 398, 464, 473, 751, 760, 1072, 1192
DdeI CTNAG 4 cut(s) 192, 445, 949, 1105
DpnI GATC 4 cut(s) 131, 318, 383, 910
DpnII GATC 4 cut(s) 129, 316, 381, 908
DrdI GACNNNNNNGTC 2 cut(s) 67, 1096
DseDI GACNNNNNNGTC 2 cut(s) 67, 1096
EaeI YGGCCR 2 cut(s) 1077, 1142
Eam1104I CTCTTC 2 cut(s) 272, 927
EarI CTCTTC 2 cut(s) 272, 927
Eco130I CCWWGG 1 cut(s) 791
Eco24I GRGCYC 2 cut(s) 114, 642
Eco31I GGTCTC 1 cut(s) 1206
Eco47I GGWCC 1 cut(s) 846
Eco88I CYCGRG 1 cut(s) 1226
EcoNI CCTNNNNNAGG 1 cut(s) 948
EcoO109I RGGNCCY 1 cut(s) 846
EcoRI GAATTC 1 cut(s) 1235
EcoRII CCWGG 3 cut(s) 18, 168, 182
EcoT14I CCWWGG 1 cut(s) 791
EcoT38I GRGCYC 2 cut(s) 114, 642
ErhI CCWWGG 1 cut(s) 791
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 8 cut(s) 30, 141, 341, 391, 497, 664, 673, 1084
FalI AAGNNNNNCTT 2 cut(s) 459, 491
FaqI GGGAC 2 cut(s) 809, 859
FatI CATG 8 cut(s) 26, 137, 337, 387, 493, 660, 669, 1080
FauI CCCGC 3 cut(s) 629, 739, 1112
FauNDI CATATG 1 cut(s) 1033
Fnu4HI GCNGC 6 cut(s) 9, 31, 36, 82, 159, 721
FokI GGATG 6 cut(s) 357, 361, 510, 690, 1145, 1174
FriOI GRGCYC 2 cut(s) 114, 642
Fsp4HI GCNGC 6 cut(s) 9, 31, 36, 82, 159, 721
FspBI CTAG 4 cut(s) 93, 792, 1065, 1170
GlaI GCGC 2 cut(s) 34, 43
GluI GCNGC 6 cut(s) 9, 31, 36, 82, 159, 721
HaeIII GGCC 2 cut(s) 1079, 1144
HapII CCGG 2 cut(s) 85, 843
HhaI GCGC 2 cut(s) 35, 44
Hin1II CATG 8 cut(s) 30, 141, 341, 391, 497, 664, 673, 1084
Hin6I GCGC 2 cut(s) 33, 42
HinP1I GCGC 2 cut(s) 33, 42
HinfI GANTC 4 cut(s) 142, 178, 307, 664
HpaII CCGG 2 cut(s) 85, 843
HphI GGTGA 3 cut(s) 391, 1168, 1177
Hpy166II GTNNAC 3 cut(s) 615, 776, 788
Hpy188I TCNGA 3 cut(s) 312, 1089, 1241
Hpy188III TCNNGA 4 cut(s) 447, 594, 624, 661
Hpy8I GTNNAC 3 cut(s) 615, 776, 788
HpyAV CCTTC 3 cut(s) 307, 658, 717
HpyCH4III ACNGT 4 cut(s) 64, 107, 773, 874
HpyCH4IV ACGT 1 cut(s) 758
HpyF10VI GCNNNNNNNGC 7 cut(s) 39, 41, 50, 54, 98, 902, 962
HpyF3I CTNAG 4 cut(s) 192, 445, 949, 1105
HpySE526I ACGT 1 cut(s) 758
Hsp92II CATG 8 cut(s) 30, 141, 341, 391, 497, 664, 673, 1084
HspAI GCGC 2 cut(s) 33, 42
KflI GGGWCCC 1 cut(s) 846
Kzo9I GATC 4 cut(s) 129, 316, 381, 908
LmnI GCTCC 2 cut(s) 166, 1216
Lsp1109I GCAGC 4 cut(s) 17, 20, 22, 732
LweI GCATC 6 cut(s) 32, 40, 223, 343, 712, 743
MaeI CTAG 4 cut(s) 93, 792, 1065, 1170
MaeII ACGT 1 cut(s) 758
MaeIII GTNAC 1 cut(s) 1165
MalI GATC 4 cut(s) 131, 318, 383, 910
MbiI CCGCTC 1 cut(s) 1119
MboI GATC 4 cut(s) 129, 316, 381, 908
MflI RGATCY 2 cut(s) 316, 908
MhlI GDGCHC 3 cut(s) 114, 642, 778
MlsI TGGCCA 1 cut(s) 1144
MluCI AATT 3 cut(s) 259, 429, 1235
MluNI TGGCCA 1 cut(s) 1144
MlyI GAGTC 1 cut(s) 658
MmeI TCCRAC 2 cut(s) 462, 496
MnlI CCTC 7 cut(s) 145, 174, 773, 954, 1114, 1152, 1224
Mox20I TGGCCA 1 cut(s) 1144
MroXI GAANNNNTTC 1 cut(s) 177
MscI TGGCCA 1 cut(s) 1144
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 2 cut(s) 339, 1150
Msp20I TGGCCA 1 cut(s) 1144
MspI CCGG 2 cut(s) 85, 843
MspR9I CCNGG 4 cut(s) 20, 170, 184, 844
MvaI CCWGG 3 cut(s) 20, 170, 184
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 7 cut(s) 39, 41, 50, 54, 98, 902, 962
NciI CCSGG 1 cut(s) 844
NdeI CATATG 1 cut(s) 1033
NdeII GATC 4 cut(s) 129, 316, 381, 908
NlaIII CATG 8 cut(s) 30, 141, 341, 391, 497, 664, 673, 1084
NlaIV GGNNCC 5 cut(s) 162, 318, 847, 848, 1212
NmeAIII GCCGAG 1 cut(s) 1055
NmuCI GTSAC 1 cut(s) 1165
NspV TTCGAA 1 cut(s) 225
PagI TCATGA 1 cut(s) 660
PdmI GAANNNNTTC 1 cut(s) 177
PfeI GAWTC 3 cut(s) 142, 178, 307
PfoI TCCNGGA 1 cut(s) 168
PkrI GCNGC 6 cut(s) 10, 32, 37, 83, 160, 722
PleI GAGTC 1 cut(s) 658
PpsI GAGTC 1 cut(s) 658
Ppu21I YACGTR 1 cut(s) 759
PpuMI RGGWCCY 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 846
Psp6I CCWGG 3 cut(s) 18, 168, 182
PspGI CCWGG 3 cut(s) 18, 168, 182
PspN4I GGNNCC 5 cut(s) 162, 318, 847, 848, 1212
PspPI GGNCC 1 cut(s) 846
PspPPI RGGWCCY 1 cut(s) 846
PstI CTGCAG 1 cut(s) 1186
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 2 cut(s) 316, 908
RsaI GTAC 7 cut(s) 399, 465, 474, 752, 761, 1073, 1193
RsaNI GTAC 7 cut(s) 398, 464, 473, 751, 760, 1072, 1192
RseI CAYNNNNRTG 2 cut(s) 339, 1150
SaqAI TTAA 1 cut(s) 198
SatI GCNGC 6 cut(s) 9, 31, 36, 82, 159, 721
Sau3AI GATC 4 cut(s) 129, 316, 381, 908
Sau96I GGNCC 1 cut(s) 846
SchI GAGTC 1 cut(s) 658
ScrFI CCNGG 4 cut(s) 20, 170, 184, 844
SduI GDGCHC 3 cut(s) 114, 642, 778
SfaNI GCATC 6 cut(s) 32, 40, 223, 343, 712, 743
SfcI CTRYAG 2 cut(s) 769, 1182
SfuI TTCGAA 1 cut(s) 225
SinI GGWCC 1 cut(s) 846
SmiMI CAYNNNNRTG 2 cut(s) 339, 1150
SpeI ACTAGT 1 cut(s) 1169
Sse9I AATT 3 cut(s) 259, 429, 1235
SsiI CCGC 6 cut(s) 82, 148, 158, 636, 732, 1119
SspMI CTAG 4 cut(s) 93, 792, 1065, 1170
StyD4I CCNGG 4 cut(s) 18, 168, 182, 842
StyI CCWWGG 1 cut(s) 791
TaaI ACNGT 4 cut(s) 64, 107, 773, 874
TaiI ACGT 1 cut(s) 761
TaqI TCGA 1 cut(s) 225
TasI AATT 3 cut(s) 259, 429, 1235
TatI WGTACW 5 cut(s) 463, 472, 750, 1071, 1191
TauI GCSGC 2 cut(s) 84, 161
TfiI GAWTC 3 cut(s) 142, 178, 307
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TscAI CASTG 7 cut(s) 243, 291, 705, 778, 790, 877, 1026
TseFI GTSAC 1 cut(s) 1165
TseI GCWGC 4 cut(s) 8, 30, 35, 720
Tsp45I GTSAC 1 cut(s) 1165
TspDTI ATGAA 5 cut(s) 368, 376, 482, 1005, 1020
TspRI CASTG 7 cut(s) 243, 291, 705, 778, 790, 877, 1026
VneI GTGCAC 1 cut(s) 774
VpaK11BI GGWCC 1 cut(s) 846
XagI CCTNNNNNAGG 1 cut(s) 948
XapI RAATTY 2 cut(s) 259, 1235
XmaJI CCTAGG 1 cut(s) 791
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 4 cut(s) 93, 792, 1065, 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.