Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0004888

Physical Location & Seq

Genomic Coordinates Reverse (-)

17526367 .. 17539130

Gene Structure 12764 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGAATTCCTGGCCTTCTTACTCATCCCATTTCGCCTTCTTTGTTCTCATCAGCATTCCTTTTTCCTCAAGCTTCGATTCGTACACAACTTATAGCAAAACGTTTAACTGTGGAGGCATCACAAAAGTGGGATTTCCCTTTTGGGGAGATGGAAGGCCGGACAATTGTGGCTATCCGGAACTGAAGCTCGCATGCTCGAATGATGTTACCACCATTGAGATTATGAGGGTCAAATACAGATTGTTGAAGATTAACCAAGATAAGCAGACACTCAAAGTTGTGAGAGATGACTACTATGACAAAATTTGTTCACCGAAGTTTGGGGACACCAAACTCGATTCCAATCTTTTCGACTATGTTTCCGGTTCTTCGGACGTCACGTTAGTCTATGATTGTGCTTCTAGCTTGCCAGCTGGAGGTTGCAAGTGCCCCGACAACGAAACTTACGCGAATGTGGCTGCAGTACCTGCAGCTGTCCCGGGCACTCCGATTTGTAAGGCAAAAGTGGTTGTTCGGTTTAGTGATCCTACAGGTTTCGGAATATTCAGTATACTGAACGTGGAGGCACTTGAAGCTGCAGTGAGAGAAGGGTTTGAGGTGAATTATGAGGTGGATAGTGGAAAATGTGACGAGTGTGTTGGTTCAAAGGGTGTTTGTGGTTATGATTGGAATTTGAATGAGACTGTTTGTCACTGCCCAAATCAAACTTCCGAGCCCCGGACTTGTTCCGCCGCCAGAACAGCGGCCATAAACAATCCAGCAGCAGTGCCACTGCCACCTGCTAAAGGAAAAAAGACGGGAATCGCGATAGGTCTTGCTATAGGAGGTGCAATTCTTTTCGGCATTTTGGTTGGGTTCTATGTTTATTATTTCATCCAACGCAAGAAGAGGAAACTTGCTGCAGAGACTCAAAGCAAAGAGCAGCCTACACCCCTTACAAGCAATAGCATTACAACTCCCTTAACTAATCTCTCTCAATCTCAGAGCATCCCGTCTTATCCCTCTTTTACCTCCAAGTCTGAGTATGATAATAAGGCGAGCACTTACTTTGGAGTTAAGGTCTTCAGCTATACTGAATTAGAGGAAGCTACTGAAAATTTCAACCCCGCTAAAGAGCTTGGAGATGGAGGCTTTGGCACTGTTTACTATGGTAAGCTACATGATGGCCGTGTAGTTGCAGTGAAGCGCCTTTATGAAAACAATTTCAAACGTGTGGAGCAATTCATGAATGAGGTCGAGATCTTAACTCGTCTTGAACACCGGAACCTTGTCAAGCTGTATGGATGCACCTCAAAACGCAGCCGAGAACTTCTCCTTGTTTATGAGTATATTCCTAATGGAACAGTGGCTGACCATCTCCATGGGAAACGAGTGGAATCTGGCTTTCTTAGTTGGCCTGTTAGATTGAACATTGCCATAGAGACAGCTGATGCACTGGCTTACCTCCATCGCAATGATGTAATACACCGCGATGTCAAGAGCAACAATATTCTCCTAGAGGACGACTTTTGCGTGAAAGTGGCTGATTTTGGTCTGTCACGCTTGTTCCCCAACGATGCCACCCATGTGTCAACTGCTCCGCAAGGGACTCCCGGCTATGTTGATCCCGAGTATTACCAGTGCTACCAACTCACAGACAAGAGTGACGTATATAGCTTTGGGGTGGTCCTGATCGAGCTTTTATCGTCATTACAAGCAGTGGACACCAATAGGCATCGGCTTGACATAAATTTGGCCAACCTGGCCGTCAACAAAATCCAAAACCATTTAGTAAATGAGCTGGTCGATCCTCTTCTAGGGTTTGAAACAAACGTTTCAGTTAGAAGGATGACAACAGCTGTGGCAGAATTGGCTTTCCGGTGTTTGCAACAGGAGAAGGATATGCGACCAACCATGGACGAAGTGTTGAAGGGTTTGAAAGCAGTCCAAAACGAAGATCTTGGTTCAGAAAACGGCGAAGCAGTGGTGCTGGATATCGGAGCAGACGAGGTTGGACTTTTGAAGAGTATGCCACCCCCGCTTTCACCAGACTCGAATGGAACTGATAAATTGGTTTTTAAGAGATGGGACAATACTATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

694

Amino Acids

76.68

Weight (kDa)

5.57

Isoelectric Point (pI)

35.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	36 - 95	6.7e-15	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	162 - 234	2e-12	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	369 - 637	2.5e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	370 - 637	7.3e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66880 AT1G66880 AT1G66880 AT5G38210 AT5G38210 AT5G38210
fragaria_vesca	FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540
malus_domestica	MD00G1204100.v1.1 MD09G1255300.v1.1 MD17G1247800.v1.1 MD17G1248000.v1.1
prunus_persica	Prupe.3G146500_v2.0.a1 Prupe.3G146700_v2.0.a1
pyrus_communis	pycom09g17110 pycom17g24910 pycom17g25040
rosa_chinensis	RchiOBHm_Chr6g0273041
rosa_laevigata	RLG00000013645
rosa_multiflora	Rmu_ssc0000387.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195700
rosa_rugosa	Rorug06G0072500
rosa_samantha	Rh6AG188100 Rh6BG191500 Rh6CG190600 Rh6DG182000
rosa_wichuraiana	Rw6G016310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	787
AatII	GACGTC	1 cut(s)	378
Acc36I	ACCTGC	2 cut(s)	475, 787
AccI	GTMKAC	1 cut(s)	550
AccII	CGCG	3 cut(s)	449, 806, 1470
AccIII	TCCGGA	1 cut(s)	175
AciI	CCGC	7 cut(s)	729, 732, 743, 1107, 1468, 1580, 2018
AclI	AACGTT	2 cut(s)	101, 1812
AclWI	GGATC	3 cut(s)	518, 1598, 1781
AcoI	YGGCCR	4 cut(s)	744, 1165, 1734, 1743
AcsI	RAATTY	5 cut(s)	4, 303, 670, 1096, 1729
AcuI	CTGAAG	2 cut(s)	203, 1048
AcyI	GRCGYC	1 cut(s)	375
AfaI	GTAC	2 cut(s)	83, 465
AfiI	CCNNNNNNNGG	6 cut(s)	143, 320, 416, 717, 785, 1796
AflIII	ACRYGT	1 cut(s)	1210
AhdI	GACNNNNNGTC	1 cut(s)	687
AjnI	CCWGG	2 cut(s)	8, 1740
AjuI	GAANNNNNNNTTGG	2 cut(s)	691, 723
AleI	CACNNNNGTG	2 cut(s)	125, 1565
Alw21I	GWGCWC	1 cut(s)	1043
Alw26I	GTCTC	3 cut(s)	674, 899, 1415
AlwI	GGATC	3 cut(s)	518, 1598, 1781
AlwNI	CAGNNNCTG	2 cut(s)	467, 1349
Ama87I	CYCGRG	2 cut(s)	478, 1607
Aor13HI	TCCGGA	1 cut(s)	175
AoxI	GGCC	7 cut(s)	11, 155, 744, 1165, 1394, 1734, 1743
ApeKI	GCWGC	7 cut(s)	458, 470, 575, 761, 899, 922, 1299
ApoI	RAATTY	5 cut(s)	4, 303, 670, 1096, 1729
AspLEI	GCGC	1 cut(s)	1188
AspS9I	GGNCC	1 cut(s)	1666
AsuC2I	CCSGG	4 cut(s)	479, 480, 718, 1593
AsuHPI	GGTGA	3 cut(s)	303, 610, 2016
AvaI	CYCGRG	2 cut(s)	478, 1607
AvaII	GGWCC	1 cut(s)	1666
BaeGI	GKGCMC	2 cut(s)	431, 485
BalI	TGGCCA	1 cut(s)	1736
BanII	GRGCYC	1 cut(s)	717
BbsI	GAAGAC	1 cut(s)	1054
Bbv12I	GWGCWC	1 cut(s)	1043
BbvI	GCAGC	7 cut(s)	445, 482, 562, 773, 886, 934, 1311
BccI	CCATC	6 cut(s)	143, 1118, 1157, 1362, 1455, 2058
BceAI	ACGGC	3 cut(s)	1152, 1730, 1969
BciT130I	CCWGG	2 cut(s)	10, 1742
BcnI	CCSGG	4 cut(s)	479, 480, 718, 1593
BcoDI	GTCTC	3 cut(s)	674, 899, 1415
BfaI	CTAG	3 cut(s)	402, 1496, 1796
BfmI	CTRYAG	6 cut(s)	459, 468, 528, 576, 819, 900
BfoI	RGCGCY	1 cut(s)	1189
BfuAI	ACCTGC	2 cut(s)	475, 787
BglI	GCCNNNNNGGC	1 cut(s)	1742
BglII	AGATCT	2 cut(s)	1239, 1936
BisI	GCNGC	9 cut(s)	459, 471, 576, 732, 744, 762, 900, 923, 1300
BlsI	GCNGC	9 cut(s)	460, 472, 577, 733, 745, 763, 901, 924, 1301
Bme1390I	CCNGG	6 cut(s)	10, 479, 480, 718, 1593, 1742
Bme18I	GGWCC	1 cut(s)	1666
BmeRI	GACNNNNNGTC	1 cut(s)	687
BmeT110I	CYCGRG	2 cut(s)	478, 1607
BmgT120I	GGNCC	1 cut(s)	1666
BmiI	GGNNCC	1 cut(s)	1265
BmrFI	CCNGG	6 cut(s)	10, 479, 480, 718, 1593, 1742
BmsI	GCATC	6 cut(s)	126, 996, 1274, 1420, 1546, 1723
BpiI	GAAGAC	1 cut(s)	1054
BplI	GAGNNNNNCTC	2 cut(s)	1296, 1328
BpmI	CTGGAG	1 cut(s)	435
BpuEI	CTTGAG	1 cut(s)	52
BpuMI	CCSGG	4 cut(s)	479, 480, 718, 1593
BsaBI	GATNNNNATC	1 cut(s)	342
BsaHI	GRCGYC	1 cut(s)	375
BsaJI	CCNNGG	4 cut(s)	478, 716, 1360, 1893
BsaWI	WCCGGW	4 cut(s)	175, 362, 1260, 1857
BsaXI	ACNNNNNCTCC	2 cut(s)	1044, 1074
Bsc4I	CCNNNNNNNGG	6 cut(s)	143, 320, 416, 717, 785, 1796
Bse1I	ACTGG	2 cut(s)	1440, 1618
Bse3DI	GCAATG	2 cut(s)	1410, 1459
Bse8I	GATNNNNATC	1 cut(s)	342
BseAI	TCCGGA	1 cut(s)	175
BseBI	CCWGG	2 cut(s)	10, 1742
BseDI	CCNNGG	4 cut(s)	478, 716, 1360, 1893
BseGI	GGATG	5 cut(s)	23, 873, 987, 1289, 1833
BseJI	GATNNNNATC	1 cut(s)	342
BseLI	CCNNNNNNNGG	6 cut(s)	143, 320, 416, 717, 785, 1796
BseMI	GCAATG	2 cut(s)	1410, 1459
BseMII	CTCAG	2 cut(s)	995, 1011
BseNI	ACTGG	2 cut(s)	1440, 1618
BseSI	GKGCMC	2 cut(s)	431, 485
BseXI	GCAGC	7 cut(s)	445, 482, 562, 773, 886, 934, 1311
Bsh1236I	CGCG	3 cut(s)	449, 806, 1470
BshFI	GGCC	7 cut(s)	13, 157, 746, 1167, 1396, 1736, 1745
BsiHKAI	GWGCWC	1 cut(s)	1043
BsiHKCI	CYCGRG	2 cut(s)	478, 1607
BsiSI	CCGG	8 cut(s)	158, 176, 363, 479, 718, 1261, 1593, 1858
BslFI	GGGAC	3 cut(s)	338, 461, 1600
BslI	CCNNNNNNNGG	6 cut(s)	143, 320, 416, 717, 785, 1796
BsmAI	GTCTC	3 cut(s)	674, 899, 1415
BsmFI	GGGAC	3 cut(s)	338, 461, 1600
BsmI	GAATGC	1 cut(s)	54
BsnI	GGCC	7 cut(s)	13, 157, 746, 1167, 1396, 1736, 1745
BsoBI	CYCGRG	2 cut(s)	478, 1607
Bsp1286I	GDGCHC	4 cut(s)	431, 485, 717, 1043
Bsp13I	TCCGGA	1 cut(s)	175
Bsp143I	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
Bsp19I	CCATGG	2 cut(s)	1360, 1893
Bsp68I	TCGCGA	1 cut(s)	806
BspACI	CCGC	7 cut(s)	729, 732, 743, 1107, 1468, 1580, 2018
BspANI	GGCC	7 cut(s)	13, 157, 746, 1167, 1396, 1736, 1745
BspCNI	CTCAG	2 cut(s)	994, 1012
BspEI	TCCGGA	1 cut(s)	175
BspFNI	CGCG	3 cut(s)	449, 806, 1470
BspHI	TCATGA	1 cut(s)	1224
BspLI	GGNNCC	1 cut(s)	1265
BspMAI	CTGCAG	4 cut(s)	463, 472, 580, 904
BspMI	ACCTGC	2 cut(s)	475, 787
BspPI	GGATC	3 cut(s)	518, 1598, 1781
BsrDI	GCAATG	2 cut(s)	1410, 1459
BsrI	ACTGG	2 cut(s)	1440, 1618
BssECI	CCNNGG	4 cut(s)	478, 716, 1360, 1893
BssMI	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
BssNAI	GTATAC	1 cut(s)	551
BssNI	GRCGYC	1 cut(s)	375
BssT1I	CCWWGG	2 cut(s)	1360, 1893
Bst1107I	GTATAC	1 cut(s)	551
Bst2UI	CCWGG	2 cut(s)	10, 1742
Bst4CI	ACNGT	4 cut(s)	110, 685, 1141, 1345
Bst6I	CTCTTC	3 cut(s)	881, 1797, 1997
BstACI	GRCGYC	1 cut(s)	375
BstAPI	GCANNNNNTGC	1 cut(s)	467
BstC8I	GCNNGC	5 cut(s)	189, 193, 407, 411, 1039
BstDEI	CTNAG	3 cut(s)	981, 1020, 1388
BstDSI	CCRYGG	2 cut(s)	1360, 1893
BstENI	CCTNNNNNAGG	2 cut(s)	783, 1794
BstF5I	GGATG	5 cut(s)	23, 873, 987, 1289, 1833
BstFNI	CGCG	3 cut(s)	449, 806, 1470
BstH2I	RGCGCY	1 cut(s)	1189
BstHHI	GCGC	1 cut(s)	1188
BstKTI	GATC	6 cut(s)	526, 1242, 1606, 1674, 1789, 1939
BstMAI	GTCTC	3 cut(s)	674, 899, 1415
BstMBI	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
BstMWI	GCNNNNNNNGC	7 cut(s)	455, 467, 572, 740, 1742, 1850, 2017
BstNI	CCWGG	2 cut(s)	10, 1742
BstNSI	RCATGY	1 cut(s)	195
BstSCI	CCNGG	6 cut(s)	8, 477, 478, 716, 1591, 1740
BstSFI	CTRYAG	6 cut(s)	459, 468, 528, 576, 819, 900
BstSLI	GKGCMC	2 cut(s)	431, 485
BstUI	CGCG	3 cut(s)	449, 806, 1470
BstV1I	GCAGC	7 cut(s)	445, 482, 562, 773, 886, 934, 1311
BstV2I	GAAGAC	1 cut(s)	1054
BstX2I	RGATCY	2 cut(s)	1239, 1936
BstXI	CCANNNNNNTGG	1 cut(s)	1361
BstYI	RGATCY	2 cut(s)	1239, 1936
BstZ17I	GTATAC	1 cut(s)	551
BsuRI	GGCC	7 cut(s)	13, 157, 746, 1167, 1396, 1736, 1745
BtgI	CCRYGG	2 cut(s)	1360, 1893
BtgZI	GCGATG	2 cut(s)	1433, 1485
BtsCI	GGATG	5 cut(s)	23, 873, 987, 1289, 1833
BtsI	GCAGTG	7 cut(s)	585, 691, 770, 771, 1185, 1704, 1968
BtuMI	TCGCGA	1 cut(s)	806
BveI	ACCTGC	2 cut(s)	475, 787
Cac8I	GCNNGC	5 cut(s)	189, 193, 407, 411, 1039
CaiI	CAGNNNCTG	2 cut(s)	467, 1349
CciI	TCATGA	1 cut(s)	1224
CfoI	GCGC	1 cut(s)	1188
Cfr13I	GGNCC	1 cut(s)	1666
Cfr9I	CCCGGG	1 cut(s)	478
Csp6I	GTAC	2 cut(s)	82, 464
CspCI	CAANNNNNGTGG	2 cut(s)	1821, 1856
CviAII	CATG	6 cut(s)	192, 1160, 1225, 1361, 1565, 1894
CviQI	GTAC	2 cut(s)	82, 464
DdeI	CTNAG	3 cut(s)	981, 1020, 1388
DpnI	GATC	6 cut(s)	525, 1241, 1605, 1673, 1788, 1938
DpnII	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
DriI	GACNNNNNGTC	1 cut(s)	687
EaeI	YGGCCR	4 cut(s)	744, 1165, 1734, 1743
Eam1104I	CTCTTC	3 cut(s)	881, 1797, 1997
Eam1105I	GACNNNNNGTC	1 cut(s)	687
EarI	CTCTTC	3 cut(s)	881, 1797, 1997
EciI	GGCGGA	1 cut(s)	718
Eco130I	CCWWGG	2 cut(s)	1360, 1893
Eco24I	GRGCYC	1 cut(s)	717
Eco32I	GATATC	1 cut(s)	1975
Eco47I	GGWCC	1 cut(s)	1666
Eco57I	CTGAAG	2 cut(s)	203, 1048
Eco88I	CYCGRG	2 cut(s)	478, 1607
EcoNI	CCTNNNNNAGG	2 cut(s)	783, 1794
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	8, 1740
EcoRV	GATATC	1 cut(s)	1975
EcoT14I	CCWWGG	2 cut(s)	1360, 1893
EcoT38I	GRGCYC	1 cut(s)	717
ErhI	CCWWGG	2 cut(s)	1360, 1893
FaeI	CATG	6 cut(s)	195, 1163, 1228, 1364, 1568, 1897
FaqI	GGGAC	3 cut(s)	338, 461, 1600
FatI	CATG	6 cut(s)	191, 1159, 1224, 1360, 1564, 1893
FauI	CCCGC	2 cut(s)	1114, 2025
FblI	GTMKAC	1 cut(s)	550
Fnu4HI	GCNGC	9 cut(s)	459, 471, 576, 732, 744, 762, 900, 923, 1300
FokI	GGATG	5 cut(s)	10, 860, 974, 1296, 1840
FriOI	GRGCYC	1 cut(s)	717
Fsp4HI	GCNGC	9 cut(s)	459, 471, 576, 732, 744, 762, 900, 923, 1300
FspBI	CTAG	3 cut(s)	402, 1496, 1796
GlaI	GCGC	1 cut(s)	1187
GluI	GCNGC	9 cut(s)	459, 471, 576, 732, 744, 762, 900, 923, 1300
GsuI	CTGGAG	1 cut(s)	435
HaeII	RGCGCY	1 cut(s)	1189
HaeIII	GGCC	7 cut(s)	13, 157, 746, 1167, 1396, 1736, 1745
HapII	CCGG	8 cut(s)	158, 176, 363, 479, 718, 1261, 1593, 1858
HhaI	GCGC	1 cut(s)	1188
Hin1I	GRCGYC	1 cut(s)	375
Hin1II	CATG	6 cut(s)	195, 1163, 1228, 1364, 1568, 1897
Hin6I	GCGC	1 cut(s)	1186
HinP1I	GCGC	1 cut(s)	1186
HincII	GTYRAC	2 cut(s)	1572, 1750
HindII	GTYRAC	2 cut(s)	1572, 1750
HindIII	AAGCTT	1 cut(s)	70
HinfI	GANTC	7 cut(s)	77, 338, 801, 907, 1376, 1588, 2030
HpaII	CCGG	8 cut(s)	158, 176, 363, 479, 718, 1261, 1593, 1858
HphI	GGTGA	3 cut(s)	303, 610, 2016
Hpy166II	GTNNAC	7 cut(s)	84, 311, 551, 1144, 1572, 1702, 1750
Hpy188I	TCNGA	8 cut(s)	373, 489, 539, 712, 984, 1021, 1948, 1979
Hpy188III	TCNNGA	8 cut(s)	176, 805, 1225, 1237, 1253, 1477, 1607, 1669
Hpy8I	GTNNAC	7 cut(s)	84, 311, 551, 1144, 1572, 1702, 1750
HpyAV	CCTTC	7 cut(s)	24, 46, 147, 581, 1818, 1870, 1903
HpyCH4III	ACNGT	4 cut(s)	110, 685, 1141, 1345
HpyCH4IV	ACGT	7 cut(s)	101, 375, 380, 558, 1210, 1647, 1812
HpyF10VI	GCNNNNNNNGC	7 cut(s)	455, 467, 572, 740, 1742, 1850, 2017
HpyF3I	CTNAG	3 cut(s)	981, 1020, 1388
HpySE526I	ACGT	7 cut(s)	101, 375, 380, 558, 1210, 1647, 1812
Hsp92I	GRCGYC	1 cut(s)	375
Hsp92II	CATG	6 cut(s)	195, 1163, 1228, 1364, 1568, 1897
HspAI	GCGC	1 cut(s)	1186
Kpn2I	TCCGGA	1 cut(s)	175
Kzo9I	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
LmnI	GCTCC	3 cut(s)	1216, 1582, 1979
Lsp1109I	GCAGC	7 cut(s)	445, 482, 562, 773, 886, 934, 1311
LweI	GCATC	6 cut(s)	126, 996, 1274, 1420, 1546, 1723
MaeI	CTAG	3 cut(s)	402, 1496, 1796
MaeII	ACGT	7 cut(s)	101, 375, 380, 558, 1210, 1647, 1812
MaeIII	GTNAC	6 cut(s)	205, 376, 626, 689, 1536, 1643
MalI	GATC	6 cut(s)	525, 1241, 1605, 1673, 1788, 1938
MboI	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
MboII	GAAGA	7 cut(s)	259, 360, 898, 1054, 1784, 1946, 2014
MfeI	CAATTG	1 cut(s)	163
MflI	RGATCY	2 cut(s)	1239, 1936
MhlI	GDGCHC	4 cut(s)	431, 485, 717, 1043
MlsI	TGGCCA	1 cut(s)	1736
MluNI	TGGCCA	1 cut(s)	1736
MlyI	GAGTC	3 cut(s)	901, 1582, 2024
MmeI	TCCRAC	2 cut(s)	901, 1972
Mox20I	TGGCCA	1 cut(s)	1736
MroI	TCCGGA	1 cut(s)	175
MscI	TGGCCA	1 cut(s)	1736
MseI	TTAA	7 cut(s)	105, 252, 962, 1056, 1244, 2058, 2080
MslI	CAYNNNNRTG	5 cut(s)	125, 1359, 1452, 1470, 1565
Msp20I	TGGCCA	1 cut(s)	1736
MspA1I	CMGCKG	5 cut(s)	413, 473, 743, 1427, 1838
MspI	CCGG	8 cut(s)	158, 176, 363, 479, 718, 1261, 1593, 1858
MspR9I	CCNGG	6 cut(s)	10, 479, 480, 718, 1593, 1742
MunI	CAATTG	1 cut(s)	163
Mva1269I	GAATGC	1 cut(s)	54
MvaI	CCWGG	2 cut(s)	10, 1742
MvnI	CGCG	3 cut(s)	449, 806, 1470
MwoI	GCNNNNNNNGC	7 cut(s)	455, 467, 572, 740, 1742, 1850, 2017
NciI	CCSGG	4 cut(s)	479, 480, 718, 1593
NcoI	CCATGG	2 cut(s)	1360, 1893
NdeII	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
NlaIII	CATG	6 cut(s)	195, 1163, 1228, 1364, 1568, 1897
NlaIV	GGNNCC	1 cut(s)	1265
NmeAIII	GCCGAG	1 cut(s)	1328
NmuCI	GTSAC	5 cut(s)	376, 626, 689, 1536, 1643
NruI	TCGCGA	1 cut(s)	806
NspI	RCATGY	1 cut(s)	195
OliI	CACNNNNGTG	2 cut(s)	125, 1565
PaeI	GCATGC	1 cut(s)	195
PagI	TCATGA	1 cut(s)	1224
PaqCI	CACCTGC	1 cut(s)	787
PcsI	WCGNNNNNNNCGW	4 cut(s)	377, 803, 1509, 1983
PctI	GAATGC	1 cut(s)	54
PfeI	GAWTC	4 cut(s)	77, 338, 801, 1376
PkrI	GCNGC	9 cut(s)	460, 472, 577, 733, 745, 763, 901, 924, 1301
PleI	GAGTC	3 cut(s)	901, 1582, 2024
PpsI	GAGTC	3 cut(s)	901, 1582, 2024
Psp1406I	AACGTT	2 cut(s)	101, 1812
Psp6I	CCWGG	2 cut(s)	8, 1740
PspGI	CCWGG	2 cut(s)	8, 1740
PspN4I	GGNNCC	1 cut(s)	1265
PspPI	GGNCC	1 cut(s)	1666
PstI	CTGCAG	4 cut(s)	463, 472, 580, 904
PstNI	CAGNNNCTG	2 cut(s)	467, 1349
PsuI	RGATCY	2 cut(s)	1239, 1936
PvuII	CAGCTG	4 cut(s)	413, 473, 1427, 1838
RruI	TCGCGA	1 cut(s)	806
RsaI	GTAC	2 cut(s)	83, 465
RsaNI	GTAC	2 cut(s)	82, 464
RseI	CAYNNNNRTG	5 cut(s)	125, 1359, 1452, 1470, 1565
SaqAI	TTAA	7 cut(s)	105, 252, 962, 1056, 1244, 2058, 2080
SatI	GCNGC	9 cut(s)	459, 471, 576, 732, 744, 762, 900, 923, 1300
Sau3AI	GATC	6 cut(s)	523, 1239, 1603, 1671, 1786, 1936
Sau96I	GGNCC	1 cut(s)	1666
SchI	GAGTC	3 cut(s)	901, 1582, 2024
ScrFI	CCNGG	6 cut(s)	10, 479, 480, 718, 1593, 1742
SduI	GDGCHC	4 cut(s)	431, 485, 717, 1043
SfaNI	GCATC	6 cut(s)	126, 996, 1274, 1420, 1546, 1723
SfcI	CTRYAG	6 cut(s)	459, 468, 528, 576, 819, 900
SfiI	GGCCNNNNNGGCC	1 cut(s)	1742
SinI	GGWCC	1 cut(s)	1666
SmaI	CCCGGG	1 cut(s)	480
SmiMI	CAYNNNNRTG	5 cut(s)	125, 1359, 1452, 1470, 1565
SmlI	CTYRAG	1 cut(s)	67
SmoI	CTYRAG	1 cut(s)	67
SphI	GCATGC	1 cut(s)	195
SsiI	CCGC	7 cut(s)	729, 732, 743, 1107, 1468, 1580, 2018
SspI	AATATT	2 cut(s)	543, 1489
SspMI	CTAG	3 cut(s)	402, 1496, 1796
StyD4I	CCNGG	6 cut(s)	8, 477, 478, 716, 1591, 1740
StyI	CCWWGG	2 cut(s)	1360, 1893
TaaI	ACNGT	4 cut(s)	110, 685, 1141, 1345
TaiI	ACGT	7 cut(s)	104, 378, 383, 561, 1213, 1650, 1815
TaqI	TCGA	8 cut(s)	75, 197, 336, 351, 1236, 1674, 1785, 2033
TauI	GCSGC	2 cut(s)	734, 746
TfiI	GAWTC	4 cut(s)	77, 338, 801, 1376
Tru1I	TTAA	7 cut(s)	105, 252, 962, 1056, 1244, 2058, 2080
Tru9I	TTAA	7 cut(s)	105, 252, 962, 1056, 1244, 2058, 2080
TseFI	GTSAC	5 cut(s)	376, 626, 689, 1536, 1643
TseI	GCWGC	7 cut(s)	458, 470, 575, 761, 899, 922, 1299
Tsp45I	GTSAC	5 cut(s)	376, 626, 689, 1536, 1643
TspDTI	ATGAA	5 cut(s)	17, 862, 1209, 1213, 1241
TspMI	CCCGGG	1 cut(s)	478
VpaK11BI	GGWCC	1 cut(s)	1666
XagI	CCTNNNNNAGG	2 cut(s)	783, 1794
XapI	RAATTY	5 cut(s)	4, 303, 670, 1096, 1729
XceI	RCATGY	1 cut(s)	195
XmaI	CCCGGG	1 cut(s)	478
XmiI	GTMKAC	1 cut(s)	550
XspI	CTAG	3 cut(s)	402, 1496, 1796
ZraI	GACGTC	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.