Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0004888

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG190600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGAATTCCTTGGTGCTTTTTCCGTCCTCTTTGATTCCTTTGCTTTTGATCACTTCCTTTCTGTCGATCAATTTTCAACCAAGTGTGTGCGCCGATGATGCATATGCTAACTGCAGCCAACCTATTACCTGCGGGAGTGTCAAGAGCAACATCTCTTACCCCTTTTGGGGAGTGAACCGAGCCGATTACTGTGGCAAATCTGGGTTCGAGGTCACATGCCAAGACGATGTCCCGATGATCAGCATGCAGAAAATCAATTTCAGAATTCTTAACATGAAGAATAGCACTACTACCCTAACTCCGACTGTGACAGTTGCAAGGGAGGATTATTGGAACACTCTCTGTCCTAAGAGTTATATTGAGACAAACCTCAACTTCTCTCTGTTTGATTACACATCTGGGACTCAAAACGTGTCTTTTTACTACGGATGCGGAACTGCAACTTCAACGTTGTCAATGTTAGGATTTAATTTTTCTAGTATCTCACAAAAATGCAACGATACCGTCACAGTTTCCTTTCTCACAGAGAAGCAAATTGCTAACCTTCCGGATACAACTGCCTTGCGCTCCTGTCAACCCGTGGTTTTGGTTCCGGTGTCTGCGGCAGCTGCTGATGCGCTTGACAGCAATCAAACATCGACTATCCAGAATGCGGTAGATGGTGGTTTTGAATTGAACGTGCAGAATGATGATACTGGTCTTTGCAACAATTGCGTGGCCTCAGGGGGATTTTGTGGGCAAAACACTACTAATGCTCAGTTCATTTGCTATTGCCCGAATTCAAATTCAACAGAAACATGTACTTCAAATTCATCAACTCCAAATCCATCCGGTTCATCATCAGGAAAGAATAATCAAATACCAATAGGTCTTGCTGTTGGAGGTGCAATCCTTTTTGGCATTTTCGTGGGATTCTACACATATTTTGTCATCCAGCGAAAGAAGAAGAAACGTGCAGCAGAAGCTCAGAGCAAAGAGATTCCCACCCCACTTACAAGCAAAAGCACTGTTACTCCCTCGACTAATCTTTCTCAATCTCAAAGCATCCCTTCTTATCCTTCCTTTAACTCAAAATCAAGGTCTGACCTTGGAAAAGCCAGCACTTACTTTGGAGTTCAGGTCTTCAGCTATACTGAATTAGAGGAAGCCACTGAAAATTTCAACCCTGCTAAAGAACTTGGAGATGGAGGCTTTGGCACCGTTTACTATGGTAAGCTACATGATGGCCGTGTAGTTGCAGTGAAGCGCCTTTATGAAAACAATTTCAAACGGGTGGAGCAGTTTATGAATGAGGTTGAAATCTTAACACGTCTGGAACACCAGCATCTTGTGAAACTCTATGGATGCACCTCAAGACGTAGCCGAGAACTCCTCCTTGTCTATGAATATATTTCTAATGGAACAGTGGCTGACCATCTCCATGGAAAACGAATGGAGTCTGGCTTTCTCAGTTGGCCTGTTAGATTGAGCATTGCCATAGAGACAGCTGATGCACTGGCTTTCCTTCATCGCAATGATGTGATACACCGTGATGTCAAAACCAACAATATACTTCTGGATGACGACTTTTGTGTGAAAGTTGCTGATTTTGGTCTGTCACGGTTGTTCCCCAATGATCAGACCCATGTGTCAACTGCTCCACAAGGGACGCCGGGCTATGTTGATCCCGAGTATTACCAGTGCTATCAACTGACTGACAAAAGTGATGTTTATAGCTTTGGGGTGGTCTTGATCGAGCTTATATCATCCTTACAAGCTGTCGACACCAACAGGCACCGGCATGATATAAATTTGGCCAACATGGCTATCAACAAAATTCAAAATCATTTGGTGAATGAGTTGGTTGATCCACTTCTTGGGTATGACAAGGACTATTCTGTGAGGATAATGGCAACAGCTGTTGCAGAATTGGCCTTCCGGTGTTTGCAGCAGGAGAAAGATATGAGACCAACCATGGAAGAAGTACTGGAGGGTTTAAAAGCAATTCAAAATGAAGACCTTGGTGCACAAGAAAATGGGGAGGCAGAGGCAGTGGTCCTGGATATAGGAGCTGATGAAGTTGGGCTTTTGAGGAATTTGCCTCCCCCACTCTCACCAGACTCAGTTGTCACTGATAAATTGATTTTAAAAAGGTGGGACAGAACTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

716

Amino Acids

78.96

Weight (kDa)

5.17

Isoelectric Point (pI)

33.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	38 - 99	1.2e-12	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	171 - 260	6.4e-16	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	389 - 657	1.4e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	390 - 658	1.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66880 AT1G66880 AT1G66880 AT5G38210 AT5G38210 AT5G38210
fragaria_vesca	FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540
malus_domestica	MD00G1204100.v1.1 MD09G1255300.v1.1 MD17G1247800.v1.1 MD17G1248000.v1.1
prunus_persica	Prupe.3G146500_v2.0.a1 Prupe.3G146700_v2.0.a1
pyrus_communis	pycom09g17110 pycom17g24910 pycom17g25040
rosa_chinensis	RchiOBHm_Chr6g0273041
rosa_laevigata	RLG00000013645
rosa_multiflora	Rmu_ssc0000387.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195700
rosa_rugosa	Rorug06G0072500
rosa_samantha	Rh6AG188100 Rh6BG191500 Rh6CG190600 Rh6DG182000
rosa_wichuraiana	Rw6G016310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1627, 2105
Acc36I	ACCTGC	1 cut(s)	137
AccB1I	GGYRCC	2 cut(s)	1196, 1773
AccB7I	CCANNNNNTGG	1 cut(s)	1856
AccI	GTMKAC	1 cut(s)	1761
AccIII	TCCGGA	1 cut(s)	547
AciI	CCGC	4 cut(s)	132, 432, 602, 653
AclI	AACGTT	1 cut(s)	449
AclWI	GGATC	2 cut(s)	1658, 1841
AcoI	YGGCCR	2 cut(s)	1225, 1794
AcsI	RAATTY	9 cut(s)	4, 264, 778, 784, 808, 1156, 1789, 1815, 2074
AcuI	CTGAAG	1 cut(s)	1108
AcyI	GRCGYC	1 cut(s)	1649
AfaI	GTAC	2 cut(s)	802, 1965
AfiI	CCNNNNNNNGG	4 cut(s)	166, 167, 652, 1856
AflIII	ACRYGT	3 cut(s)	411, 797, 1307
AjiI	CACGTC	1 cut(s)	1310
AjnI	CCWGG	1 cut(s)	2037
Alw21I	GWGCWC	1 cut(s)	2008
Alw26I	GTCTC	3 cut(s)	356, 1475, 1939
Alw44I	GTGCAC	1 cut(s)	2004
AlwI	GGATC	2 cut(s)	1658, 1841
AlwNI	CAGNNNCTG	2 cut(s)	611, 1409
Ama87I	CYCGRG	1 cut(s)	1667
Aor13HI	TCCGGA	1 cut(s)	547
AoxI	GGCC	5 cut(s)	717, 1225, 1454, 1794, 1911
ApaLI	GTGCAC	1 cut(s)	2004
ApeKI	GCWGC	5 cut(s)	114, 605, 608, 956, 1927
ApoI	RAATTY	9 cut(s)	4, 264, 778, 784, 808, 1156, 1789, 1815, 2074
ArsI	GACNNNNNNTTYG	2 cut(s)	1064, 1096
AspLEI	GCGC	4 cut(s)	92, 567, 619, 1248
AspS9I	GGNCC	1 cut(s)	2035
AsuC2I	CCSGG	1 cut(s)	1653
AsuHPI	GGTGA	2 cut(s)	1843, 2085
AvaI	CYCGRG	1 cut(s)	1667
AvaII	GGWCC	1 cut(s)	2035
AxyI	CCTNAGG	1 cut(s)	721
BaeGI	GKGCMC	1 cut(s)	2008
BalI	TGGCCA	1 cut(s)	1796
BanI	GGYRCC	2 cut(s)	1196, 1773
BbsI	GAAGAC	2 cut(s)	1114, 2001
Bbv12I	GWGCWC	1 cut(s)	2008
BbvI	GCAGC	5 cut(s)	126, 595, 617, 968, 1939
BccI	CCATC	5 cut(s)	653, 835, 1178, 1217, 1422
BceAI	ACGGC	1 cut(s)	1212
BciT130I	CCWGG	1 cut(s)	2039
BciVI	GTATCC	1 cut(s)	544
BclI	TGATCA	3 cut(s)	48, 237, 1615
BcnI	CCSGG	1 cut(s)	1653
BcoDI	GTCTC	3 cut(s)	356, 1475, 1939
BfaI	CTAG	1 cut(s)	477
BfmI	CTRYAG	1 cut(s)	112
BfoI	RGCGCY	1 cut(s)	1249
BfuAI	ACCTGC	1 cut(s)	137
BfuI	GTATCC	1 cut(s)	544
BglI	GCCNNNNNGGC	1 cut(s)	1802
BisI	GCNGC	6 cut(s)	115, 603, 606, 609, 957, 1928
BlsI	GCNGC	6 cut(s)	116, 604, 607, 610, 958, 1929
BmcAI	AGTACT	1 cut(s)	1965
Bme1390I	CCNGG	2 cut(s)	1653, 2039
Bme18I	GGWCC	1 cut(s)	2035
BmeT110I	CYCGRG	1 cut(s)	1667
BmgBI	CACGTC	1 cut(s)	1310
BmgT120I	GGNCC	1 cut(s)	2035
BmiI	GGNNCC	3 cut(s)	591, 1198, 1775
BmrFI	CCNGG	2 cut(s)	1653, 2039
BmsI	GCATC	7 cut(s)	88, 419, 604, 1053, 1333, 1334, 1480
BpiI	GAAGAC	2 cut(s)	1114, 2001
BplI	GAGNNNNNCTC	2 cut(s)	1356, 1388
BpmI	CTGGAG	1 cut(s)	1988
BpuEI	CTTGAG	1 cut(s)	1336
BpuMI	CCSGG	1 cut(s)	1653
BsaHI	GRCGYC	1 cut(s)	1649
BsaI	GGTCTC	1 cut(s)	1939
BsaJI	CCNNGG	6 cut(s)	9, 579, 1087, 1420, 1953, 1999
BsaWI	WCCGGW	4 cut(s)	547, 592, 830, 1917
BsaXI	ACNNNNNCTCC	6 cut(s)	283, 313, 997, 1027, 1104, 1134
Bsc4I	CCNNNNNNNGG	4 cut(s)	166, 167, 652, 1856
Bse118I	RCCGGY	1 cut(s)	1776
Bse1I	ACTGG	4 cut(s)	700, 1500, 1678, 1971
Bse21I	CCTNAGG	1 cut(s)	721
Bse3DI	GCAATG	2 cut(s)	1470, 1519
BseAI	TCCGGA	1 cut(s)	547
BseBI	CCWGG	1 cut(s)	2039
BseDI	CCNNGG	6 cut(s)	9, 579, 1087, 1420, 1953, 1999
BseGI	GGATG	7 cut(s)	434, 827, 930, 1044, 1349, 1564, 1745
BseLI	CCNNNNNNNGG	4 cut(s)	166, 167, 652, 1856
BseMI	GCAATG	2 cut(s)	1470, 1519
BseMII	CTCAG	5 cut(s)	735, 770, 980, 1462, 2115
BseNI	ACTGG	4 cut(s)	700, 1500, 1678, 1971
BseRI	GAGGAG	1 cut(s)	1361
BseSI	GKGCMC	1 cut(s)	2008
BseXI	GCAGC	5 cut(s)	126, 595, 617, 968, 1939
BsgI	GTGCAG	2 cut(s)	701, 975
BshFI	GGCC	5 cut(s)	719, 1227, 1456, 1796, 1913
BshNI	GGYRCC	2 cut(s)	1196, 1773
BsiHKAI	GWGCWC	1 cut(s)	2008
BsiHKCI	CYCGRG	1 cut(s)	1667
BsiSI	CCGG	6 cut(s)	548, 593, 831, 1652, 1777, 1918
BslFI	GGGAC	3 cut(s)	215, 415, 1660
BslI	CCNNNNNNNGG	4 cut(s)	166, 167, 652, 1856
BsmAI	GTCTC	3 cut(s)	356, 1475, 1939
BsmFI	GGGAC	3 cut(s)	215, 415, 1660
BsmI	GAATGC	1 cut(s)	655
BsnI	GGCC	5 cut(s)	719, 1227, 1456, 1796, 1913
Bso31I	GGTCTC	1 cut(s)	1939
BsoBI	CYCGRG	1 cut(s)	1667
Bsp1286I	GDGCHC	1 cut(s)	2008
Bsp13I	TCCGGA	1 cut(s)	547
Bsp143I	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
Bsp19I	CCATGG	2 cut(s)	1420, 1953
BspACI	CCGC	4 cut(s)	132, 432, 602, 653
BspANI	GGCC	5 cut(s)	719, 1227, 1456, 1796, 1913
BspCNI	CTCAG	5 cut(s)	734, 769, 979, 1461, 2114
BspEI	TCCGGA	1 cut(s)	547
BspLI	GGNNCC	3 cut(s)	591, 1198, 1775
BspMAI	CTGCAG	1 cut(s)	116
BspMI	ACCTGC	1 cut(s)	137
BspPI	GGATC	2 cut(s)	1658, 1841
BspT107I	GGYRCC	2 cut(s)	1196, 1773
BspTNI	GGTCTC	1 cut(s)	1939
BsrDI	GCAATG	2 cut(s)	1470, 1519
BsrFI	RCCGGY	1 cut(s)	1776
BsrI	ACTGG	4 cut(s)	700, 1500, 1678, 1971
BssAI	RCCGGY	1 cut(s)	1776
BssECI	CCNNGG	6 cut(s)	9, 579, 1087, 1420, 1953, 1999
BssMI	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
BssNI	GRCGYC	1 cut(s)	1649
BssT1I	CCWWGG	5 cut(s)	9, 1087, 1420, 1953, 1999
Bst2UI	CCWGG	1 cut(s)	2039
BstACI	GRCGYC	1 cut(s)	1649
BstAPI	GCANNNNNTGC	1 cut(s)	711
BstC8I	GCNNGC	2 cut(s)	245, 1099
BstDEI	CTNAG	6 cut(s)	348, 721, 756, 966, 1448, 2101
BstDSI	CCRYGG	3 cut(s)	579, 1420, 1953
BstF5I	GGATG	7 cut(s)	434, 827, 930, 1044, 1349, 1564, 1745
BstH2I	RGCGCY	1 cut(s)	1249
BstHHI	GCGC	4 cut(s)	92, 567, 619, 1248
BstKTI	GATC	7 cut(s)	51, 69, 240, 1618, 1666, 1734, 1849
BstMAI	GTCTC	3 cut(s)	356, 1475, 1939
BstMBI	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
BstMWI	GCNNNNNNNGC	7 cut(s)	98, 608, 614, 711, 962, 1802, 1910
BstNI	CCWGG	1 cut(s)	2039
BstNSI	RCATGY	3 cut(s)	219, 247, 801
BstSCI	CCNGG	2 cut(s)	1651, 2037
BstSFI	CTRYAG	1 cut(s)	112
BstSLI	GKGCMC	1 cut(s)	2008
BstV1I	GCAGC	5 cut(s)	126, 595, 617, 968, 1939
BstV2I	GAAGAC	2 cut(s)	1114, 2001
BstXI	CCANNNNNNTGG	1 cut(s)	1421
Bsu36I	CCTNAGG	1 cut(s)	721
BsuI	GTATCC	1 cut(s)	544
BsuRI	GGCC	5 cut(s)	719, 1227, 1456, 1796, 1913
BtgI	CCRYGG	3 cut(s)	579, 1420, 1953
BtgZI	GCGATG	1 cut(s)	1493
BtrI	CACGTC	1 cut(s)	1310
BtsCI	GGATG	7 cut(s)	434, 827, 930, 1044, 1349, 1564, 1745
BtsI	GCAGTG	2 cut(s)	1245, 2037
BtsIMutI	CAGTG	8 cut(s)	1005, 1149, 1245, 1410, 1493, 1685, 2037, 2109
BveI	ACCTGC	1 cut(s)	137
Cac8I	GCNNGC	2 cut(s)	245, 1099
CaiI	CAGNNNCTG	2 cut(s)	611, 1409
CfoI	GCGC	4 cut(s)	92, 567, 619, 1248
Cfr10I	RCCGGY	1 cut(s)	1776
Cfr13I	GGNCC	1 cut(s)	2035
CseI	GACGC	1 cut(s)	1657
Csp6I	GTAC	2 cut(s)	801, 1964
CviQI	GTAC	2 cut(s)	801, 1964
DdeI	CTNAG	6 cut(s)	348, 721, 756, 966, 1448, 2101
DpnI	GATC	7 cut(s)	50, 68, 239, 1617, 1665, 1733, 1848
DpnII	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
DraI	TTTAAA	2 cut(s)	1977, 2127
DrdI	GACNNNNNNGTC	2 cut(s)	1627, 2105
DseDI	GACNNNNNNGTC	2 cut(s)	1627, 2105
EaeI	YGGCCR	2 cut(s)	1225, 1794
Eco130I	CCWWGG	5 cut(s)	9, 1087, 1420, 1953, 1999
Eco31I	GGTCTC	1 cut(s)	1939
Eco47I	GGWCC	1 cut(s)	2035
Eco57I	CTGAAG	1 cut(s)	1108
Eco81I	CCTNAGG	1 cut(s)	721
Eco88I	CYCGRG	1 cut(s)	1667
EcoRI	GAATTC	3 cut(s)	4, 264, 778
EcoRII	CCWGG	1 cut(s)	2037
EcoT14I	CCWWGG	5 cut(s)	9, 1087, 1420, 1953, 1999
EcoT22I	ATGCAT	1 cut(s)	103
ErhI	CCWWGG	5 cut(s)	9, 1087, 1420, 1953, 1999
FalI	AAGNNNNNCTT	4 cut(s)	1033, 1065, 2049, 2081
FaqI	GGGAC	3 cut(s)	215, 415, 1660
FauI	CCCGC	1 cut(s)	125
FauNDI	CATATG	1 cut(s)	103
FbaI	TGATCA	3 cut(s)	48, 237, 1615
FblI	GTMKAC	1 cut(s)	1761
Fnu4HI	GCNGC	6 cut(s)	115, 603, 606, 609, 957, 1928
FokI	GGATG	7 cut(s)	441, 814, 917, 1031, 1356, 1571, 1732
Fsp4HI	GCNGC	6 cut(s)	115, 603, 606, 609, 957, 1928
FspBI	CTAG	1 cut(s)	477
GlaI	GCGC	4 cut(s)	91, 566, 618, 1247
GluI	GCNGC	6 cut(s)	115, 603, 606, 609, 957, 1928
GsuI	CTGGAG	1 cut(s)	1988
HaeII	RGCGCY	1 cut(s)	1249
HaeIII	GGCC	5 cut(s)	719, 1227, 1456, 1796, 1913
HapII	CCGG	6 cut(s)	548, 593, 831, 1652, 1777, 1918
HgaI	GACGC	1 cut(s)	1657
HhaI	GCGC	4 cut(s)	92, 567, 619, 1248
Hin1I	GRCGYC	1 cut(s)	1649
Hin6I	GCGC	4 cut(s)	90, 565, 617, 1246
HinP1I	GCGC	4 cut(s)	90, 565, 617, 1246
HincII	GTYRAC	3 cut(s)	575, 1632, 1762
HindII	GTYRAC	3 cut(s)	575, 1632, 1762
HinfI	GANTC	6 cut(s)	34, 403, 912, 979, 1436, 2099
HpaII	CCGG	6 cut(s)	548, 593, 831, 1652, 1777, 1918
HphI	GGTGA	2 cut(s)	1843, 2085
Hpy166II	GTNNAC	6 cut(s)	175, 575, 1204, 1632, 1762, 2006
Hpy188I	TCNGA	5 cut(s)	263, 303, 969, 1084, 1620
Hpy8I	GTNNAC	6 cut(s)	175, 575, 1204, 1632, 1762, 2006
HpyAV	CCTTC	5 cut(s)	554, 1059, 1068, 1514, 1924
HpyCH4IV	ACGT	6 cut(s)	411, 449, 678, 952, 1309, 1357
HpyF10VI	GCNNNNNNNGC	7 cut(s)	98, 608, 614, 711, 962, 1802, 1910
HpyF3I	CTNAG	6 cut(s)	348, 721, 756, 966, 1448, 2101
HpySE526I	ACGT	6 cut(s)	411, 449, 678, 952, 1309, 1357
Hsp92I	GRCGYC	1 cut(s)	1649
HspAI	GCGC	4 cut(s)	90, 565, 617, 1246
Kpn2I	TCCGGA	1 cut(s)	547
Ksp22I	TGATCA	3 cut(s)	48, 237, 1615
Kzo9I	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
LmnI	GCTCC	4 cut(s)	572, 1276, 1642, 2048
Lsp1109I	GCAGC	5 cut(s)	126, 595, 617, 968, 1939
LweI	GCATC	7 cut(s)	88, 419, 604, 1053, 1333, 1334, 1480
MaeI	CTAG	1 cut(s)	477
MaeII	ACGT	6 cut(s)	411, 449, 678, 952, 1309, 1357
MaeIII	GTNAC	6 cut(s)	211, 307, 505, 1009, 1596, 2107
MalI	GATC	7 cut(s)	50, 68, 239, 1617, 1665, 1733, 1848
MboI	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
MboII	GAAGA	6 cut(s)	289, 955, 958, 1114, 1970, 2006
MfeI	CAATTG	1 cut(s)	709
MhlI	GDGCHC	1 cut(s)	2008
MlsI	TGGCCA	1 cut(s)	1796
MluNI	TGGCCA	1 cut(s)	1796
MlyI	GAGTC	3 cut(s)	397, 1445, 2093
MmeI	TCCRAC	2 cut(s)	326, 859
Mox20I	TGGCCA	1 cut(s)	1796
Mph1103I	ATGCAT	1 cut(s)	103
MroI	TCCGGA	1 cut(s)	547
MscI	TGGCCA	1 cut(s)	1796
MseI	TTAA	6 cut(s)	270, 468, 1065, 1304, 1976, 2126
MslI	CAYNNNNRTG	6 cut(s)	490, 905, 1419, 1512, 1530, 1779
Msp20I	TGGCCA	1 cut(s)	1796
MspA1I	CMGCKG	3 cut(s)	608, 1487, 1898
MspI	CCGG	6 cut(s)	548, 593, 831, 1652, 1777, 1918
MspR9I	CCNGG	2 cut(s)	1653, 2039
MunI	CAATTG	1 cut(s)	709
Mva1269I	GAATGC	1 cut(s)	655
MvaI	CCWGG	1 cut(s)	2039
MwoI	GCNNNNNNNGC	7 cut(s)	98, 608, 614, 711, 962, 1802, 1910
NciI	CCSGG	1 cut(s)	1653
NcoI	CCATGG	2 cut(s)	1420, 1953
NdeI	CATATG	1 cut(s)	103
NdeII	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
NlaIV	GGNNCC	3 cut(s)	591, 1198, 1775
NmeAIII	GCCGAG	1 cut(s)	1388
NmuCI	GTSAC	5 cut(s)	211, 307, 505, 1596, 2107
NsiI	ATGCAT	1 cut(s)	103
NspI	RCATGY	3 cut(s)	219, 247, 801
PaeI	GCATGC	1 cut(s)	247
PciI	ACATGT	1 cut(s)	797
PctI	GAATGC	1 cut(s)	655
PfeI	GAWTC	3 cut(s)	34, 912, 979
PflFI	GACNNNGTC	1 cut(s)	227
PflMI	CCANNNNNTGG	1 cut(s)	1856
PfoI	TCCNGGA	1 cut(s)	2037
PkrI	GCNGC	6 cut(s)	116, 604, 607, 610, 958, 1929
PleI	GAGTC	3 cut(s)	397, 1444, 2093
PpsI	GAGTC	3 cut(s)	397, 1444, 2093
PscI	ACATGT	1 cut(s)	797
Psp1406I	AACGTT	1 cut(s)	449
Psp6I	CCWGG	1 cut(s)	2037
PspGI	CCWGG	1 cut(s)	2037
PspN4I	GGNNCC	3 cut(s)	591, 1198, 1775
PspPI	GGNCC	1 cut(s)	2035
PstI	CTGCAG	1 cut(s)	116
PstNI	CAGNNNCTG	2 cut(s)	611, 1409
PsyI	GACNNNGTC	1 cut(s)	227
PvuII	CAGCTG	3 cut(s)	608, 1487, 1898
RsaI	GTAC	2 cut(s)	802, 1965
RsaNI	GTAC	2 cut(s)	801, 1964
RseI	CAYNNNNRTG	6 cut(s)	490, 905, 1419, 1512, 1530, 1779
SalI	GTCGAC	1 cut(s)	1760
SaqAI	TTAA	6 cut(s)	270, 468, 1065, 1304, 1976, 2126
SatI	GCNGC	6 cut(s)	115, 603, 606, 609, 957, 1928
Sau3AI	GATC	7 cut(s)	48, 66, 237, 1615, 1663, 1731, 1846
Sau96I	GGNCC	1 cut(s)	2035
ScaI	AGTACT	1 cut(s)	1965
SchI	GAGTC	3 cut(s)	397, 1445, 2093
ScrFI	CCNGG	2 cut(s)	1653, 2039
SduI	GDGCHC	1 cut(s)	2008
SfaNI	GCATC	7 cut(s)	88, 419, 604, 1053, 1333, 1334, 1480
SfcI	CTRYAG	1 cut(s)	112
SinI	GGWCC	1 cut(s)	2035
SmiMI	CAYNNNNRTG	6 cut(s)	490, 905, 1419, 1512, 1530, 1779
SmlI	CTYRAG	1 cut(s)	1351
SmoI	CTYRAG	1 cut(s)	1351
SphI	GCATGC	1 cut(s)	247
SsiI	CCGC	4 cut(s)	132, 432, 602, 653
SspMI	CTAG	1 cut(s)	477
StyD4I	CCNGG	2 cut(s)	1651, 2037
StyI	CCWWGG	5 cut(s)	9, 1087, 1420, 1953, 1999
TaiI	ACGT	6 cut(s)	414, 452, 681, 955, 1312, 1360
TaqI	TCGA	6 cut(s)	65, 207, 638, 1019, 1734, 1761
TatI	WGTACW	2 cut(s)	800, 1963
TauI	GCSGC	1 cut(s)	605
TfiI	GAWTC	3 cut(s)	34, 912, 979
Tru1I	TTAA	6 cut(s)	270, 468, 1065, 1304, 1976, 2126
Tru9I	TTAA	6 cut(s)	270, 468, 1065, 1304, 1976, 2126
TscAI	CASTG	8 cut(s)	1012, 1156, 1245, 1410, 1500, 1685, 2037, 2116
TseFI	GTSAC	5 cut(s)	211, 307, 505, 1596, 2107
TseI	GCWGC	5 cut(s)	114, 605, 608, 956, 1927
Tsp45I	GTSAC	5 cut(s)	211, 307, 505, 1596, 2107
TspGWI	ACGGA	2 cut(s)	12, 441
TspRI	CASTG	8 cut(s)	1012, 1156, 1245, 1410, 1500, 1685, 2037, 2116
Tth111I	GACNNNGTC	1 cut(s)	227
Van91I	CCANNNNNTGG	1 cut(s)	1856
VneI	GTGCAC	1 cut(s)	2004
VpaK11BI	GGWCC	1 cut(s)	2035
XapI	RAATTY	9 cut(s)	4, 264, 778, 784, 808, 1156, 1789, 1815, 2074
XceI	RCATGY	3 cut(s)	219, 247, 801
XmiI	GTMKAC	1 cut(s)	1761
XspI	CTAG	1 cut(s)	477
ZrmI	AGTACT	1 cut(s)	1965
Zsp2I	ATGCAT	1 cut(s)	103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.