Rroxscaffold_7G00195700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
38263386 .. 38270879
7494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00195700.1

Sequence Viewer

Length: 1479 bp
ATGCTGATACTGGCTCCTGCAACAATTGCTTCGCATCAGGGGGGAGTTTGTGGGCAAAGCACTACTGGTGCCAACGAATTCATGTGCTTTTGCCAGACTACTTCATCTTCGACAACCACATGTACTGAAAGCTCTTCACCATCTCCAAATTCAGCTCCACCCGGTTCAGGAAACAAAAGTCAAATAGCAATAGGTCTTGCTGTAGGAGGTGCAATCCTTTTTGGCATTTTCGTGGGATTCTACACATATTATGTCATCCAGCGAAAGAAGAAGAAACGTACAGCAGAAGCTCAGAGCAAAGAGATTCCCACTCCACTTACAAGCAAAAGCACTGTTACGCCCTCAACTAATCTTTCTCAATCTCAAAGCATCCCTTCTTATCCTTCCTTTAACTCAAAATCAAGGTCTGACCTTGGAAAAGCCAGCACTTACTTTGGAGTTCAGGTATTCAGCTATGCTGAATTAGAGGAAGCCACTGAAAATTTCAACCCTGCTAAAGAACTTGGAGATGGAGGCTTTGGCACCGTTTACTATGGTAAGCTACATGATGGCCGTGTAGTTGCAGTGAAGCGCCTTTATGAAAACAATTTCAAACGGGTGGAGCAGTTTATGAATGAGGTTGAAATCTTAACACGTCTGGAACACCAGCATCTTGTGAAACTCTATGGATGCACCTCAAGACGTAGCCGAGAACTCCTCCTTGTCTATGAATATATTTCTAATGGAACAGTGGCTGACCATCTCCATGGAAAACGAATGGAGTCTGGCTTTCTCAGTTGGCCTGTTAGATTGAGCATCGCCATAGAGACAGCTGATGCACTGGCTTTCCTTCATCGCAATGATGTGATACACCGTGATGTCAAAACCAACAATATACTTCTGGATGATGACTTTTGTGTGAAAGTTGCTGATTTTGGTCTGTCACGGTTGTTCCCCAATGATCAGACCCATGTGTCAACTGCTCCACAAGGGACGCCGGGCTATGTTGATCCCGAGTATTACCAGTGCTATCAACTCACTGACAAAAGTGATGTTTATAGCTTTGGGGTGGTCTTGATCGAGCTTATATCATCCTTACAAGCTGTCGACACCAACAGGCACCGGCATGATATAAATTTGGCCAACATGGCTATCAACAAAATTCAAAATCATTTGGTGAATGAGTTGGTTGATCCACTTCTTGGGTATGACAAGGACTATTCTGTGAGGATAATGGCAACAGCTGTTGCAGAATTGGCCTTCCGGTGTTTGCAGCAGGAGAAAGATATGAGACCAACCATGGAAGAAGTACTGGAGGGTTTAAAAGCAATCCAAAATGAAGACCTTGGTGCACAAGAAAATGGGGAGGCAGAGGCAGTGGTCCTGGATATAGGAGCTGATGACGTTGGGCTTTTGAGGAATTTGCCTCCCCCACTCTCACCAGACTCAGTTGTCACTGATAAATTGGTTAGCAGCTCTCCCACACCTAGTTCCTTTTAG

Protein Analysis

492

Amino Acids

54.07

Weight (kDa)

5.45

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 164 - 432 5.5e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 165 - 433 4.8e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 952, 1430
AccB1I GGYRCC 3 cut(s) 68, 521, 1098
AccB7I CCANNNNNTGG 1 cut(s) 1181
AccI GTMKAC 1 cut(s) 1086
AclWI GGATC 2 cut(s) 983, 1166
AcoI YGGCCR 2 cut(s) 550, 1119
AcsI RAATTY 6 cut(s) 77, 148, 481, 1114, 1140, 1399
AcyI GRCGYC 1 cut(s) 974
AfaI GTAC 3 cut(s) 124, 280, 1290
AfiI CCNNNNNNNGG 2 cut(s) 167, 1181
AflIII ACRYGT 2 cut(s) 119, 632
AgsI TTSAA 4 cut(s) 487, 592, 623, 1145
AjiI CACGTC 1 cut(s) 635
AjnI CCWGG 1 cut(s) 1362
Alw21I GWGCWC 1 cut(s) 1333
Alw26I GTCTC 2 cut(s) 800, 1264
Alw44I GTGCAC 1 cut(s) 1329
AlwI GGATC 2 cut(s) 983, 1166
AlwNI CAGNNNCTG 1 cut(s) 734
Ama87I CYCGRG 1 cut(s) 992
AoxI GGCC 4 cut(s) 550, 779, 1119, 1236
ApaLI GTGCAC 1 cut(s) 1329
ApeKI GCWGC 2 cut(s) 1252, 1452
ApoI RAATTY 6 cut(s) 77, 148, 481, 1114, 1140, 1399
ArsI GACNNNNNNTTYG 2 cut(s) 389, 421
AspLEI GCGC 1 cut(s) 573
AspS9I GGNCC 1 cut(s) 1360
AsuC2I CCSGG 2 cut(s) 162, 978
AsuHPI GGTGA 3 cut(s) 129, 1168, 1410
AvaI CYCGRG 1 cut(s) 992
AvaII GGWCC 1 cut(s) 1360
BaeGI GKGCMC 1 cut(s) 1333
BalI TGGCCA 1 cut(s) 1121
BanI GGYRCC 3 cut(s) 68, 521, 1098
BbsI GAAGAC 1 cut(s) 1326
Bbv12I GWGCWC 1 cut(s) 1333
BbvI GCAGC 2 cut(s) 1264, 1464
BccI CCATC 4 cut(s) 148, 503, 542, 747
BceAI ACGGC 1 cut(s) 537
BciT130I CCWGG 1 cut(s) 1364
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 2 cut(s) 162, 978
BcoDI GTCTC 2 cut(s) 800, 1264
BfaI CTAG 1 cut(s) 1467
BfmI CTRYAG 1 cut(s) 201
BfoI RGCGCY 1 cut(s) 574
BglI GCCNNNNNGGC 1 cut(s) 1127
BisI GCNGC 2 cut(s) 1253, 1453
BlsI GCNGC 2 cut(s) 1254, 1454
BmcAI AGTACT 1 cut(s) 1290
Bme1390I CCNGG 3 cut(s) 162, 978, 1364
Bme18I GGWCC 1 cut(s) 1360
BmeT110I CYCGRG 1 cut(s) 992
BmgBI CACGTC 1 cut(s) 635
BmgT120I GGNCC 1 cut(s) 1360
BmiI GGNNCC 4 cut(s) 15, 70, 523, 1100
BmrFI CCNGG 3 cut(s) 162, 978, 1364
BmsI GCATC 6 cut(s) 43, 378, 658, 659, 804, 805
BpiI GAAGAC 1 cut(s) 1326
BplI GAGNNNNNCTC 2 cut(s) 681, 713
BpmI CTGGAG 1 cut(s) 1313
BpuEI CTTGAG 1 cut(s) 661
BpuMI CCSGG 2 cut(s) 162, 978
BsaHI GRCGYC 1 cut(s) 974
BsaI GGTCTC 1 cut(s) 1264
BsaJI CCNNGG 4 cut(s) 412, 745, 1278, 1324
BsaWI WCCGGW 1 cut(s) 1242
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bsc4I CCNNNNNNNGG 2 cut(s) 167, 1181
Bse118I RCCGGY 1 cut(s) 1101
Bse1I ACTGG 5 cut(s) 15, 70, 825, 1003, 1296
Bse3DI GCAATG 1 cut(s) 844
BseBI CCWGG 1 cut(s) 1364
BseDI CCNNGG 4 cut(s) 412, 745, 1278, 1324
BseGI GGATG 5 cut(s) 255, 369, 674, 889, 1070
BseLI CCNNNNNNNGG 2 cut(s) 167, 1181
BseMI GCAATG 1 cut(s) 844
BseMII CTCAG 3 cut(s) 305, 787, 1440
BseNI ACTGG 5 cut(s) 15, 70, 825, 1003, 1296
BseRI GAGGAG 1 cut(s) 686
BseSI GKGCMC 1 cut(s) 1333
BseXI GCAGC 2 cut(s) 1264, 1464
BshFI GGCC 4 cut(s) 552, 781, 1121, 1238
BshNI GGYRCC 3 cut(s) 68, 521, 1098
BsiHKAI GWGCWC 1 cut(s) 1333
BsiHKCI CYCGRG 1 cut(s) 992
BsiSI CCGG 4 cut(s) 162, 977, 1102, 1243
BslFI GGGAC 1 cut(s) 985
BslI CCNNNNNNNGG 2 cut(s) 167, 1181
BsmAI GTCTC 2 cut(s) 800, 1264
BsmFI GGGAC 1 cut(s) 985
BsnI GGCC 4 cut(s) 552, 781, 1121, 1238
Bso31I GGTCTC 1 cut(s) 1264
BsoBI CYCGRG 1 cut(s) 992
Bsp1286I GDGCHC 1 cut(s) 1333
Bsp143I GATC 4 cut(s) 940, 988, 1056, 1171
Bsp19I CCATGG 2 cut(s) 745, 1278
BspANI GGCC 4 cut(s) 552, 781, 1121, 1238
BspCNI CTCAG 3 cut(s) 304, 786, 1439
BspLI GGNNCC 4 cut(s) 15, 70, 523, 1100
BspPI GGATC 2 cut(s) 983, 1166
BspQI GCTCTTC 1 cut(s) 139
BspT107I GGYRCC 3 cut(s) 68, 521, 1098
BspTNI GGTCTC 1 cut(s) 1264
BsrDI GCAATG 1 cut(s) 844
BsrFI RCCGGY 1 cut(s) 1101
BsrI ACTGG 5 cut(s) 15, 70, 825, 1003, 1296
BssAI RCCGGY 1 cut(s) 1101
BssECI CCNNGG 4 cut(s) 412, 745, 1278, 1324
BssMI GATC 4 cut(s) 940, 988, 1056, 1171
BssNI GRCGYC 1 cut(s) 974
BssT1I CCWWGG 4 cut(s) 412, 745, 1278, 1324
Bst2UI CCWGG 1 cut(s) 1364
Bst4CI ACNGT 5 cut(s) 334, 526, 730, 854, 927
Bst6I CTCTTC 1 cut(s) 139
BstACI GRCGYC 1 cut(s) 974
BstAPI GCANNNNNTGC 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 424
BstDEI CTNAG 3 cut(s) 291, 773, 1426
BstDSI CCRYGG 2 cut(s) 745, 1278
BstF5I GGATG 5 cut(s) 255, 369, 674, 889, 1070
BstH2I RGCGCY 1 cut(s) 574
BstHHI GCGC 1 cut(s) 573
BstKTI GATC 4 cut(s) 943, 991, 1059, 1174
BstMAI GTCTC 2 cut(s) 800, 1264
BstMBI GATC 4 cut(s) 940, 988, 1056, 1171
BstMWI GCNNNNNNNGC 3 cut(s) 26, 1127, 1235
BstNI CCWGG 1 cut(s) 1364
BstNSI RCATGY 1 cut(s) 123
BstSCI CCNGG 3 cut(s) 160, 976, 1362
BstSFI CTRYAG 1 cut(s) 201
BstSLI GKGCMC 1 cut(s) 1333
BstV1I GCAGC 2 cut(s) 1264, 1464
BstV2I GAAGAC 1 cut(s) 1326
BstXI CCANNNNNNTGG 1 cut(s) 746
BsuRI GGCC 4 cut(s) 552, 781, 1121, 1238
BtgI CCRYGG 2 cut(s) 745, 1278
BtgZI GCGATG 2 cut(s) 781, 818
BtrI CACGTC 1 cut(s) 635
BtsCI GGATG 5 cut(s) 255, 369, 674, 889, 1070
BtsI GCAGTG 2 cut(s) 570, 1362
BtsIMutI CAGTG 9 cut(s) 330, 474, 570, 735, 818, 1010, 1017, 1362, 1434
Cac8I GCNNGC 1 cut(s) 424
CaiI CAGNNNCTG 1 cut(s) 734
CfoI GCGC 1 cut(s) 573
Cfr10I RCCGGY 1 cut(s) 1101
Cfr13I GGNCC 1 cut(s) 1360
CseI GACGC 1 cut(s) 982
Csp6I GTAC 3 cut(s) 123, 279, 1289
CviAII CATG 8 cut(s) 82, 120, 545, 746, 950, 1106, 1126, 1279
CviQI GTAC 3 cut(s) 123, 279, 1289
DdeI CTNAG 3 cut(s) 291, 773, 1426
DpnI GATC 4 cut(s) 942, 990, 1058, 1173
DpnII GATC 4 cut(s) 940, 988, 1056, 1171
DraI TTTAAA 1 cut(s) 1302
DrdI GACNNNNNNGTC 2 cut(s) 952, 1430
DseDI GACNNNNNNGTC 2 cut(s) 952, 1430
EaeI YGGCCR 2 cut(s) 550, 1119
Eam1104I CTCTTC 1 cut(s) 139
EarI CTCTTC 1 cut(s) 139
Eco130I CCWWGG 4 cut(s) 412, 745, 1278, 1324
Eco31I GGTCTC 1 cut(s) 1264
Eco47I GGWCC 1 cut(s) 1360
Eco88I CYCGRG 1 cut(s) 992
EcoRI GAATTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 1362
EcoT14I CCWWGG 4 cut(s) 412, 745, 1278, 1324
ErhI CCWWGG 4 cut(s) 412, 745, 1278, 1324
FaeI CATG 8 cut(s) 85, 123, 548, 749, 953, 1109, 1129, 1282
FalI AAGNNNNNCTT 2 cut(s) 358, 390
FaqI GGGAC 1 cut(s) 985
FatI CATG 8 cut(s) 81, 119, 544, 745, 949, 1105, 1125, 1278
FbaI TGATCA 1 cut(s) 940
FblI GTMKAC 1 cut(s) 1086
Fnu4HI GCNGC 2 cut(s) 1253, 1453
FokI GGATG 5 cut(s) 242, 356, 681, 896, 1057
Fsp4HI GCNGC 2 cut(s) 1253, 1453
FspBI CTAG 1 cut(s) 1467
GlaI GCGC 1 cut(s) 572
GluI GCNGC 2 cut(s) 1253, 1453
GsuI CTGGAG 1 cut(s) 1313
HaeII RGCGCY 1 cut(s) 574
HaeIII GGCC 4 cut(s) 552, 781, 1121, 1238
HapII CCGG 4 cut(s) 162, 977, 1102, 1243
HgaI GACGC 1 cut(s) 982
HhaI GCGC 1 cut(s) 573
Hin1I GRCGYC 1 cut(s) 974
Hin1II CATG 8 cut(s) 85, 123, 548, 749, 953, 1109, 1129, 1282
Hin6I GCGC 1 cut(s) 571
HinP1I GCGC 1 cut(s) 571
HincII GTYRAC 2 cut(s) 957, 1087
HindII GTYRAC 2 cut(s) 957, 1087
HinfI GANTC 4 cut(s) 237, 304, 761, 1424
HpaII CCGG 4 cut(s) 162, 977, 1102, 1243
HphI GGTGA 3 cut(s) 129, 1168, 1410
Hpy166II GTNNAC 4 cut(s) 529, 957, 1087, 1331
Hpy188I TCNGA 3 cut(s) 294, 409, 945
Hpy188III TCNNGA 6 cut(s) 168, 638, 678, 881, 992, 1054
Hpy8I GTNNAC 4 cut(s) 529, 957, 1087, 1331
HpyAV CCTTC 4 cut(s) 384, 393, 839, 1249
HpyCH4III ACNGT 5 cut(s) 334, 526, 730, 854, 927
HpyCH4IV ACGT 4 cut(s) 277, 634, 682, 1383
HpyCH4V TGCA 8 cut(s) 20, 212, 563, 672, 818, 1229, 1252, 1331
HpyF10VI GCNNNNNNNGC 3 cut(s) 26, 1127, 1235
HpyF3I CTNAG 3 cut(s) 291, 773, 1426
HpySE526I ACGT 4 cut(s) 277, 634, 682, 1383
Hsp92I GRCGYC 1 cut(s) 974
Hsp92II CATG 8 cut(s) 85, 123, 548, 749, 953, 1109, 1129, 1282
HspAI GCGC 1 cut(s) 571
Ksp22I TGATCA 1 cut(s) 940
Kzo9I GATC 4 cut(s) 940, 988, 1056, 1171
LguI GCTCTTC 1 cut(s) 139
LmnI GCTCC 5 cut(s) 19, 160, 601, 967, 1373
Lsp1109I GCAGC 2 cut(s) 1264, 1464
LweI GCATC 6 cut(s) 43, 378, 658, 659, 804, 805
MaeI CTAG 1 cut(s) 1467
MaeII ACGT 4 cut(s) 277, 634, 682, 1383
MaeIII GTNAC 3 cut(s) 334, 921, 1432
MalI GATC 4 cut(s) 942, 990, 1058, 1173
MboI GATC 4 cut(s) 940, 988, 1056, 1171
MboII GAAGA 6 cut(s) 99, 126, 280, 283, 1295, 1331
MfeI CAATTG 1 cut(s) 24
MhlI GDGCHC 1 cut(s) 1333
MlsI TGGCCA 1 cut(s) 1121
MluNI TGGCCA 1 cut(s) 1121
MlyI GAGTC 2 cut(s) 770, 1418
Mox20I TGGCCA 1 cut(s) 1121
MscI TGGCCA 1 cut(s) 1121
MseI TTAA 3 cut(s) 390, 629, 1301
MslI CAYNNNNRTG 5 cut(s) 230, 744, 837, 855, 1104
Msp20I TGGCCA 1 cut(s) 1121
MspA1I CMGCKG 2 cut(s) 812, 1223
MspI CCGG 4 cut(s) 162, 977, 1102, 1243
MspR9I CCNGG 3 cut(s) 162, 978, 1364
MunI CAATTG 1 cut(s) 24
MvaI CCWGG 1 cut(s) 1364
MwoI GCNNNNNNNGC 3 cut(s) 26, 1127, 1235
NciI CCSGG 2 cut(s) 162, 978
NcoI CCATGG 2 cut(s) 745, 1278
NdeII GATC 4 cut(s) 940, 988, 1056, 1171
NlaIII CATG 8 cut(s) 85, 123, 548, 749, 953, 1109, 1129, 1282
NlaIV GGNNCC 4 cut(s) 15, 70, 523, 1100
NmeAIII GCCGAG 1 cut(s) 713
NmuCI GTSAC 2 cut(s) 921, 1432
NspI RCATGY 1 cut(s) 123
PciI ACATGT 1 cut(s) 119
PciSI GCTCTTC 1 cut(s) 139
PfeI GAWTC 2 cut(s) 237, 304
PflMI CCANNNNNTGG 1 cut(s) 1181
PfoI TCCNGGA 1 cut(s) 1362
PkrI GCNGC 2 cut(s) 1254, 1454
PleI GAGTC 2 cut(s) 769, 1418
PpsI GAGTC 2 cut(s) 769, 1418
PscI ACATGT 1 cut(s) 119
Psp6I CCWGG 1 cut(s) 1362
PspGI CCWGG 1 cut(s) 1362
PspN4I GGNNCC 4 cut(s) 15, 70, 523, 1100
PspPI GGNCC 1 cut(s) 1360
PstNI CAGNNNCTG 1 cut(s) 734
PvuII CAGCTG 2 cut(s) 812, 1223
RsaI GTAC 3 cut(s) 124, 280, 1290
RsaNI GTAC 3 cut(s) 123, 279, 1289
RseI CAYNNNNRTG 5 cut(s) 230, 744, 837, 855, 1104
SalI GTCGAC 1 cut(s) 1085
SapI GCTCTTC 1 cut(s) 139
SaqAI TTAA 3 cut(s) 390, 629, 1301
SatI GCNGC 2 cut(s) 1253, 1453
Sau3AI GATC 4 cut(s) 940, 988, 1056, 1171
Sau96I GGNCC 1 cut(s) 1360
ScaI AGTACT 1 cut(s) 1290
SchI GAGTC 2 cut(s) 770, 1418
ScrFI CCNGG 3 cut(s) 162, 978, 1364
SduI GDGCHC 1 cut(s) 1333
SfaNI GCATC 6 cut(s) 43, 378, 658, 659, 804, 805
SfcI CTRYAG 1 cut(s) 201
SinI GGWCC 1 cut(s) 1360
SmiMI CAYNNNNRTG 5 cut(s) 230, 744, 837, 855, 1104
SmlI CTYRAG 1 cut(s) 676
SmoI CTYRAG 1 cut(s) 676
SspMI CTAG 1 cut(s) 1467
StyD4I CCNGG 3 cut(s) 160, 976, 1362
StyI CCWWGG 4 cut(s) 412, 745, 1278, 1324
TaaI ACNGT 5 cut(s) 334, 526, 730, 854, 927
TaiI ACGT 4 cut(s) 280, 637, 685, 1386
TaqI TCGA 3 cut(s) 110, 1059, 1086
TatI WGTACW 2 cut(s) 122, 1288
TfiI GAWTC 2 cut(s) 237, 304
Tru1I TTAA 3 cut(s) 390, 629, 1301
Tru9I TTAA 3 cut(s) 390, 629, 1301
TscAI CASTG 9 cut(s) 337, 481, 570, 735, 825, 1010, 1024, 1362, 1441
TseFI GTSAC 2 cut(s) 921, 1432
TseI GCWGC 2 cut(s) 1252, 1452
Tsp45I GTSAC 2 cut(s) 921, 1432
TspDTI ATGAA 7 cut(s) 70, 93, 594, 626, 723, 821, 1332
TspRI CASTG 9 cut(s) 337, 481, 570, 735, 825, 1010, 1024, 1362, 1441
Van91I CCANNNNNTGG 1 cut(s) 1181
VneI GTGCAC 1 cut(s) 1329
VpaK11BI GGWCC 1 cut(s) 1360
XapI RAATTY 6 cut(s) 77, 148, 481, 1114, 1140, 1399
XceI RCATGY 1 cut(s) 123
XmiI GTMKAC 1 cut(s) 1086
XspI CTAG 1 cut(s) 1467
ZrmI AGTACT 1 cut(s) 1290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.