Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0004888

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG182000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGAATTCCTTTGTGCTACTTCAGTCCTCTTTGATTCCTTTGCTTTTGATCACTTCCTTTCTGTCGATCAATTTTCAATTGAGTGTGTGCGCCGATGATACAGTGGAATATGCCAACTGCAGCCAACTTATTACCTGCGGGAGCGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGCGAACCGACCCGAATACTGTGGCAAATCTGGGTTTGAGGTCACATGCGAAGCCAACGTCCCAGTGATCACCATGAGGAATATCAAGTTCAGAATTCTTGACATGAGCAATAGTAGTACTACTACAACAACTCCTACCGTAAAAGTTGCTAGGCAGGATTACTGGGAAGATATCTGTCCCTCGACATATGTTTCCACAACCCTCGACTTCTCTCTCTTCGCTTACTCTTCTGGGCTTCTGAACGTGTCTATTTGGTACGGATGCAATGCAACCGTAACAGTCACAGGTAATTCGTATCCCTGCAACAGTAGCATCGCTGCTTCCTATCTCACACAGACGAGAGCTATTAATGTCCCAATTGATCCAGTTACTACGGGAGCCTGTCAATATAAGGTTTTAGTTCCGGTATTTGAATCCGCTTCTGAGGCTCTGGACAACAATGCTACAGATATTGAGACTGCCATAGATGGTGGTTTTGAATTGGATGTGCTAGATGCTGATAATGGCCTTTGCACCGGTTGCTTGTCATCAGGGGGAGTTTGTGGGCAAGACACTACTGTTACCAACGAATTCAAGTGCTTTTGCCAGACTACTTCATCTTCGACAACCACATGTATTGAAAGCTCTTCACCATCTCCAACTTCAGCTCCATCAGGAAAGAATAATCAAATACCAATAGGTCTTGCTGTTGGAGGTGCAATCCTTTTTGGCATTTTCGTGGGATTCTACGCATATTTTGTCATCCAGCGAAAGAAGAAGAAACGTGCAGCAGAAGCTCAGAGCAAAGAGATTCCCACCCCACTTACAAGCAAAAGCACTGTTACTCCCTCGACTAATCTTTCTCAATCTCAAAGCATCCCTTCGTATCCTTCCTTTAACTCAAAATCAAGGTCTGACCTTGGAAAAGCCAGCACTTACTTTGGAGTTCAGGTCTTCAGCTATGCTGAATTAGAGGAAGCCACTGAAAATTTCAACCCTGCTAAAGAACTTGGAGATGGAGGCTTTGGCACCGTTTACTATGGTAAGCTACATGATGGCCGTGTAGTTGCAGTGAAGCGCCTTTATGAAAACAATTTCAAACGGGTGGAGCAGTTTATGAATGAGGTTGAAATCTTAACACGTCTGGAACACCAGAATCTTGTGAAACTCTATGGATGCACCTCAAGACGTAGCCGAGAACTCCTCCTTGTCTATGAATATATTTCTAATGGAACAGTGGCTGACCATCTCCATGGAAAACGAATGGAGTCTGGCTTTCTCAGTTGGCCTGTTAGACTGAGCATCGCCATAGAGACAGCTGATGCACTGGCTTTCCTTCATCGCAATGATGTGATACACCGTGATGTCAAAACCAACAATATACTTCTGGATGATGACTTTTGTGTGAAAGTTGCTGATTTTGGTCTGTCACGGTTGTTCCCCAATGATCAGACCCATGTGTCAACTGCTCCACAAGGGACGCCGGGCTATGTTGATCCCGAGTATTACCAGTGCTATCAACTCACTGACAAAAGTGATGTTTATAGCTTTGGGGTCGTCTTGATCGAGCTTATATCATCCTTACAAGCTGTTGACACCAACAGGCACCGGCATGATATAAATTTGGCCAACATGGCTATCAACAAAATTCAAAATCATTTGGTGAATGAGTTGGTTGATCCACTTCTTGGGTATGACAAGGACTATTCTGTGAGGATAATGGCAACAGCTGTTGCAGAATTGGCCTTCCGGTGTTTGCAGCAGGAGAAAGATATGAGACCAACCATGGAAGAAGTACTGGAGGGTTTAAAAGCAATCCAAAATGAAGACCTTGGTGCACAAGAAAATGGGGAGGCAGAGGCAGTGGTCCTGGATATAGGGGCTGATGAAGTTGGGCTTTTGAGGAATTTGCCTCCCCCACTCTCACCAGACTCGGTTGTCACTGATAAATTGATTTTAAAAAGGTGGGACAGAACTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

712

Amino Acids

78.33

Weight (kDa)

4.96

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	40 - 100	9e-14	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	183 - 255	8.2e-12	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	385 - 653	6.4e-49	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	386 - 654	9.2e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66880 AT1G66880 AT1G66880 AT5G38210 AT5G38210 AT5G38210
fragaria_vesca	FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540
malus_domestica	MD00G1204100.v1.1 MD09G1255300.v1.1 MD17G1247800.v1.1 MD17G1248000.v1.1
prunus_persica	Prupe.3G146500_v2.0.a1 Prupe.3G146700_v2.0.a1
pyrus_communis	pycom09g17110 pycom17g24910 pycom17g25040
rosa_chinensis	RchiOBHm_Chr6g0273041
rosa_laevigata	RLG00000013645
rosa_multiflora	Rmu_ssc0000387.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195700
rosa_rugosa	Rorug06G0072500
rosa_samantha	Rh6AG188100 Rh6BG191500 Rh6CG190600 Rh6DG182000
rosa_wichuraiana	Rw6G016310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1615, 2093
Acc36I	ACCTGC	1 cut(s)	143
AccB1I	GGYRCC	2 cut(s)	1184, 1761
AccB7I	CCANNNNNTGG	1 cut(s)	1844
AciI	CCGC	2 cut(s)	138, 594
AclWI	GGATC	3 cut(s)	533, 1646, 1829
AcoI	YGGCCR	2 cut(s)	1213, 1782
AcsI	RAATTY	7 cut(s)	4, 270, 746, 1144, 1777, 1803, 2062
AcuI	CTGAAG	3 cut(s)	5, 804, 1096
AcyI	GRCGYC	1 cut(s)	1637
AfaI	GTAC	3 cut(s)	295, 434, 1953
AfiI	CCNNNNNNNGG	3 cut(s)	172, 173, 1844
AflIII	ACRYGT	3 cut(s)	420, 788, 1295
AgeI	ACCGGT	1 cut(s)	692
AgsI	TTSAA	9 cut(s)	77, 590, 656, 751, 797, 1150, 1255, 1286, 1808
AjiI	CACGTC	1 cut(s)	1298
AjnI	CCWGG	1 cut(s)	2025
Alw21I	GWGCWC	1 cut(s)	1996
Alw26I	GTCTC	3 cut(s)	626, 1463, 1927
Alw44I	GTGCAC	1 cut(s)	1992
AlwI	GGATC	3 cut(s)	533, 1646, 1829
AlwNI	CAGNNNCTG	1 cut(s)	1397
Ama87I	CYCGRG	1 cut(s)	1655
AoxI	GGCC	5 cut(s)	682, 1213, 1442, 1782, 1899
ApaLI	GTGCAC	1 cut(s)	1992
ApeKI	GCWGC	4 cut(s)	120, 494, 944, 1915
ApoI	RAATTY	7 cut(s)	4, 270, 746, 1144, 1777, 1803, 2062
ArsI	GACNNNNNNTTYG	4 cut(s)	219, 251, 1052, 1084
AseI	ATTAAT	1 cut(s)	525
AsiGI	ACCGGT	1 cut(s)	692
AspLEI	GCGC	2 cut(s)	92, 1236
AspS9I	GGNCC	1 cut(s)	2023
AsuC2I	CCSGG	1 cut(s)	1641
AsuHPI	GGTGA	4 cut(s)	238, 798, 1831, 2073
AvaI	CYCGRG	1 cut(s)	1655
AvaII	GGWCC	1 cut(s)	2023
BaeGI	GKGCMC	1 cut(s)	1996
BalI	TGGCCA	1 cut(s)	1784
BanI	GGYRCC	2 cut(s)	1184, 1761
BbsI	GAAGAC	2 cut(s)	1102, 1989
Bbv12I	GWGCWC	1 cut(s)	1996
BbvI	GCAGC	4 cut(s)	132, 481, 956, 1927
BccI	CCATC	6 cut(s)	638, 817, 835, 1166, 1205, 1410
BceAI	ACGGC	1 cut(s)	1200
BciT130I	CCWGG	1 cut(s)	2027
BciVI	GTATCC	2 cut(s)	483, 1053
BclI	TGATCA	3 cut(s)	48, 243, 1603
BcnI	CCSGG	1 cut(s)	1641
BcoDI	GTCTC	3 cut(s)	626, 1463, 1927
BfaI	CTAG	2 cut(s)	327, 668
BfmI	CTRYAG	2 cut(s)	118, 621
BfoI	RGCGCY	1 cut(s)	1237
BfuAI	ACCTGC	1 cut(s)	143
BfuI	GTATCC	2 cut(s)	483, 1053
BglI	GCCNNNNNGGC	1 cut(s)	1790
BisI	GCNGC	4 cut(s)	121, 495, 945, 1916
BlsI	GCNGC	4 cut(s)	122, 496, 946, 1917
BmcAI	AGTACT	2 cut(s)	295, 1953
Bme1390I	CCNGG	2 cut(s)	1641, 2027
Bme18I	GGWCC	1 cut(s)	2023
BmeT110I	CYCGRG	1 cut(s)	1655
BmgBI	CACGTC	1 cut(s)	1298
BmgT120I	GGNCC	1 cut(s)	2023
BmiI	GGNNCC	3 cut(s)	556, 1186, 1763
BmrFI	CCNGG	2 cut(s)	1641, 2027
BmrI	ACTGGG	2 cut(s)	233, 349
BmsI	GCATC	7 cut(s)	428, 498, 661, 1041, 1322, 1467, 1468
BmuI	ACTGGG	2 cut(s)	233, 349
BpiI	GAAGAC	2 cut(s)	1102, 1989
BplI	GAGNNNNNCTC	2 cut(s)	1344, 1376
BpmI	CTGGAG	1 cut(s)	1976
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	1 cut(s)	1641
BsaHI	GRCGYC	1 cut(s)	1637
BsaI	GGTCTC	1 cut(s)	1927
BsaJI	CCNNGG	4 cut(s)	1075, 1408, 1941, 1987
BsaWI	WCCGGW	3 cut(s)	580, 692, 1905
BsaXI	ACNNNNNCTCC	8 cut(s)	292, 322, 808, 838, 985, 1015, 1092, 1122
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 173, 1844
Bse118I	RCCGGY	2 cut(s)	692, 1764
Bse1I	ACTGG	6 cut(s)	239, 344, 542, 1488, 1666, 1959
Bse3DI	GCAATG	2 cut(s)	448, 1507
BseBI	CCWGG	1 cut(s)	2027
BseDI	CCNNGG	4 cut(s)	1075, 1408, 1941, 1987
BseGI	GGATG	7 cut(s)	443, 667, 918, 1032, 1337, 1552, 1733
BseLI	CCNNNNNNNGG	3 cut(s)	172, 173, 1844
BseMI	GCAATG	2 cut(s)	448, 1507
BseMII	CTCAG	4 cut(s)	591, 968, 1445, 1450
BseNI	ACTGG	6 cut(s)	239, 344, 542, 1488, 1666, 1959
BseRI	GAGGAG	1 cut(s)	1349
BseSI	GKGCMC	1 cut(s)	1996
BseXI	GCAGC	4 cut(s)	132, 481, 956, 1927
BsgI	GTGCAG	1 cut(s)	963
BshFI	GGCC	5 cut(s)	684, 1215, 1444, 1784, 1901
BshNI	GGYRCC	2 cut(s)	1184, 1761
BshTI	ACCGGT	1 cut(s)	692
BsiHKAI	GWGCWC	1 cut(s)	1996
BsiHKCI	CYCGRG	1 cut(s)	1655
BsiSI	CCGG	5 cut(s)	581, 693, 1640, 1765, 1906
BslFI	GGGAC	4 cut(s)	221, 339, 515, 1648
BslI	CCNNNNNNNGG	3 cut(s)	172, 173, 1844
BsmAI	GTCTC	3 cut(s)	626, 1463, 1927
BsmFI	GGGAC	4 cut(s)	221, 339, 515, 1648
BsnI	GGCC	5 cut(s)	684, 1215, 1444, 1784, 1901
Bso31I	GGTCTC	1 cut(s)	1927
BsoBI	CYCGRG	1 cut(s)	1655
Bsp1286I	GDGCHC	1 cut(s)	1996
Bsp143I	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
Bsp19I	CCATGG	2 cut(s)	1408, 1941
BspACI	CCGC	2 cut(s)	138, 594
BspANI	GGCC	5 cut(s)	684, 1215, 1444, 1784, 1901
BspCNI	CTCAG	4 cut(s)	592, 967, 1446, 1449
BspLI	GGNNCC	3 cut(s)	556, 1186, 1763
BspMAI	CTGCAG	1 cut(s)	122
BspMI	ACCTGC	1 cut(s)	143
BspPI	GGATC	3 cut(s)	533, 1646, 1829
BspQI	GCTCTTC	1 cut(s)	808
BspT107I	GGYRCC	2 cut(s)	1184, 1761
BspTNI	GGTCTC	1 cut(s)	1927
BsrDI	GCAATG	2 cut(s)	448, 1507
BsrFI	RCCGGY	2 cut(s)	692, 1764
BsrI	ACTGG	6 cut(s)	239, 344, 542, 1488, 1666, 1959
BssAI	RCCGGY	2 cut(s)	692, 1764
BssECI	CCNNGG	4 cut(s)	1075, 1408, 1941, 1987
BssMI	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
BssNI	GRCGYC	1 cut(s)	1637
BssT1I	CCWWGG	4 cut(s)	1075, 1408, 1941, 1987
Bst2UI	CCWGG	1 cut(s)	2027
Bst6I	CTCTTC	3 cut(s)	398, 409, 808
BstACI	GRCGYC	1 cut(s)	1637
BstAPI	GCANNNNNTGC	1 cut(s)	696
BstC8I	GCNNGC	1 cut(s)	1087
BstDEI	CTNAG	4 cut(s)	600, 954, 1436, 1454
BstDSI	CCRYGG	2 cut(s)	1408, 1941
BstF5I	GGATG	7 cut(s)	443, 667, 918, 1032, 1337, 1552, 1733
BstH2I	RGCGCY	1 cut(s)	1237
BstHHI	GCGC	2 cut(s)	92, 1236
BstKTI	GATC	8 cut(s)	51, 69, 246, 541, 1606, 1654, 1722, 1837
BstMAI	GTCTC	3 cut(s)	626, 1463, 1927
BstMBI	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
BstMWI	GCNNNNNNNGC	7 cut(s)	150, 486, 602, 696, 950, 1790, 1898
BstNI	CCWGG	1 cut(s)	2027
BstNSI	RCATGY	2 cut(s)	225, 792
BstSCI	CCNGG	2 cut(s)	1639, 2025
BstSFI	CTRYAG	2 cut(s)	118, 621
BstSLI	GKGCMC	1 cut(s)	1996
BstV1I	GCAGC	4 cut(s)	132, 481, 956, 1927
BstV2I	GAAGAC	2 cut(s)	1102, 1989
BstXI	CCANNNNNNTGG	1 cut(s)	1409
BsuI	GTATCC	2 cut(s)	483, 1053
BsuRI	GGCC	5 cut(s)	684, 1215, 1444, 1784, 1901
BtgI	CCRYGG	2 cut(s)	1408, 1941
BtgZI	GCGATG	3 cut(s)	475, 1444, 1481
BtrI	CACGTC	1 cut(s)	1298
BtsCI	GGATG	7 cut(s)	443, 667, 918, 1032, 1337, 1552, 1733
BtsI	GCAGTG	2 cut(s)	1233, 2025
BveI	ACCTGC	1 cut(s)	143
Cac8I	GCNNGC	1 cut(s)	1087
CaiI	CAGNNNCTG	1 cut(s)	1397
CfoI	GCGC	2 cut(s)	92, 1236
Cfr10I	RCCGGY	2 cut(s)	692, 1764
Cfr13I	GGNCC	1 cut(s)	2023
CseI	GACGC	2 cut(s)	133, 1645
Csp6I	GTAC	3 cut(s)	294, 433, 1952
CspAI	ACCGGT	1 cut(s)	692
CspCI	CAANNNNNGTGG	2 cut(s)	775, 810
CviQI	GTAC	3 cut(s)	294, 433, 1952
DdeI	CTNAG	4 cut(s)	600, 954, 1436, 1454
DpnI	GATC	8 cut(s)	50, 68, 245, 540, 1605, 1653, 1721, 1836
DpnII	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
DraI	TTTAAA	2 cut(s)	1965, 2115
DrdI	GACNNNNNNGTC	2 cut(s)	1615, 2093
DseDI	GACNNNNNNGTC	2 cut(s)	1615, 2093
EaeI	YGGCCR	2 cut(s)	1213, 1782
Eam1104I	CTCTTC	3 cut(s)	398, 409, 808
EarI	CTCTTC	3 cut(s)	398, 409, 808
Eco130I	CCWWGG	4 cut(s)	1075, 1408, 1941, 1987
Eco31I	GGTCTC	1 cut(s)	1927
Eco32I	GATATC	1 cut(s)	349
Eco47I	GGWCC	1 cut(s)	2023
Eco57I	CTGAAG	3 cut(s)	5, 804, 1096
Eco88I	CYCGRG	1 cut(s)	1655
EcoRI	GAATTC	3 cut(s)	4, 270, 746
EcoRII	CCWGG	1 cut(s)	2025
EcoRV	GATATC	1 cut(s)	349
EcoT14I	CCWWGG	4 cut(s)	1075, 1408, 1941, 1987
ErhI	CCWWGG	4 cut(s)	1075, 1408, 1941, 1987
FalI	AAGNNNNNCTT	4 cut(s)	1021, 1053, 2037, 2069
FaqI	GGGAC	4 cut(s)	221, 339, 515, 1648
FauI	CCCGC	1 cut(s)	131
FauNDI	CATATG	1 cut(s)	364
FbaI	TGATCA	3 cut(s)	48, 243, 1603
Fnu4HI	GCNGC	4 cut(s)	121, 495, 945, 1916
FokI	GGATG	7 cut(s)	450, 674, 905, 1019, 1344, 1559, 1720
Fsp4HI	GCNGC	4 cut(s)	121, 495, 945, 1916
FspBI	CTAG	2 cut(s)	327, 668
GlaI	GCGC	2 cut(s)	91, 1235
GluI	GCNGC	4 cut(s)	121, 495, 945, 1916
GsuI	CTGGAG	1 cut(s)	1976
HaeII	RGCGCY	1 cut(s)	1237
HaeIII	GGCC	5 cut(s)	684, 1215, 1444, 1784, 1901
HapII	CCGG	5 cut(s)	581, 693, 1640, 1765, 1906
HgaI	GACGC	2 cut(s)	133, 1645
HhaI	GCGC	2 cut(s)	92, 1236
Hin1I	GRCGYC	1 cut(s)	1637
Hin6I	GCGC	2 cut(s)	90, 1234
HinP1I	GCGC	2 cut(s)	90, 1234
HincII	GTYRAC	2 cut(s)	1620, 1750
HindII	GTYRAC	2 cut(s)	1620, 1750
HinfI	GANTC	7 cut(s)	34, 590, 900, 967, 1312, 1424, 2087
HpaII	CCGG	5 cut(s)	581, 693, 1640, 1765, 1906
HphI	GGTGA	4 cut(s)	238, 798, 1831, 2073
Hpy166II	GTNNAC	4 cut(s)	1192, 1620, 1750, 1994
Hpy188I	TCNGA	6 cut(s)	269, 417, 601, 957, 1072, 1608
Hpy188III	TCNNGA	8 cut(s)	275, 608, 831, 1301, 1341, 1544, 1655, 1717
Hpy8I	GTNNAC	4 cut(s)	1192, 1620, 1750, 1994
HpyAV	CCTTC	4 cut(s)	1047, 1056, 1502, 1912
HpyCH4IV	ACGT	5 cut(s)	234, 420, 940, 1297, 1345
HpyF10VI	GCNNNNNNNGC	7 cut(s)	150, 486, 602, 696, 950, 1790, 1898
HpyF3I	CTNAG	4 cut(s)	600, 954, 1436, 1454
HpySE526I	ACGT	5 cut(s)	234, 420, 940, 1297, 1345
Hsp92I	GRCGYC	1 cut(s)	1637
HspAI	GCGC	2 cut(s)	90, 1234
Ksp22I	TGATCA	3 cut(s)	48, 243, 1603
Kzo9I	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
LguI	GCTCTTC	1 cut(s)	808
LmnI	GCTCC	6 cut(s)	141, 176, 554, 829, 1264, 1630
Lsp1109I	GCAGC	4 cut(s)	132, 481, 956, 1927
LweI	GCATC	7 cut(s)	428, 498, 661, 1041, 1322, 1467, 1468
MaeI	CTAG	2 cut(s)	327, 668
MaeII	ACGT	5 cut(s)	234, 420, 940, 1297, 1345
MaeIII	GTNAC	8 cut(s)	217, 451, 457, 544, 736, 997, 1584, 2095
MalI	GATC	8 cut(s)	50, 68, 245, 540, 1605, 1653, 1721, 1836
MboI	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
MfeI	CAATTG	2 cut(s)	77, 534
MhlI	GDGCHC	1 cut(s)	1996
MlsI	TGGCCA	1 cut(s)	1784
MluNI	TGGCCA	1 cut(s)	1784
MlyI	GAGTC	2 cut(s)	1433, 2081
MmeI	TCCRAC	2 cut(s)	839, 847
Mox20I	TGGCCA	1 cut(s)	1784
MscI	TGGCCA	1 cut(s)	1784
MseI	TTAA	5 cut(s)	525, 1053, 1292, 1964, 2114
MslI	CAYNNNNRTG	5 cut(s)	893, 1407, 1500, 1518, 1767
Msp20I	TGGCCA	1 cut(s)	1784
MspA1I	CMGCKG	2 cut(s)	1475, 1886
MspI	CCGG	5 cut(s)	581, 693, 1640, 1765, 1906
MspR9I	CCNGG	2 cut(s)	1641, 2027
MunI	CAATTG	2 cut(s)	77, 534
MvaI	CCWGG	1 cut(s)	2027
MwoI	GCNNNNNNNGC	7 cut(s)	150, 486, 602, 696, 950, 1790, 1898
NciI	CCSGG	1 cut(s)	1641
NcoI	CCATGG	2 cut(s)	1408, 1941
NdeI	CATATG	1 cut(s)	364
NdeII	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
NlaIV	GGNNCC	3 cut(s)	556, 1186, 1763
NmeAIII	GCCGAG	1 cut(s)	1376
NmuCI	GTSAC	4 cut(s)	217, 457, 1584, 2095
NspI	RCATGY	2 cut(s)	225, 792
PciI	ACATGT	1 cut(s)	788
PciSI	GCTCTTC	1 cut(s)	808
PcsI	WCGNNNNNNNCGW	1 cut(s)	1719
PfeI	GAWTC	5 cut(s)	34, 590, 900, 967, 1312
PflMI	CCANNNNNTGG	1 cut(s)	1844
PfoI	TCCNGGA	1 cut(s)	2025
PinAI	ACCGGT	1 cut(s)	692
PkrI	GCNGC	4 cut(s)	122, 496, 946, 1917
PleI	GAGTC	2 cut(s)	1432, 2081
PpsI	GAGTC	2 cut(s)	1432, 2081
PscI	ACATGT	1 cut(s)	788
PshBI	ATTAAT	1 cut(s)	525
Psp6I	CCWGG	1 cut(s)	2025
PspGI	CCWGG	1 cut(s)	2025
PspN4I	GGNNCC	3 cut(s)	556, 1186, 1763
PspPI	GGNCC	1 cut(s)	2023
PstI	CTGCAG	1 cut(s)	122
PstNI	CAGNNNCTG	1 cut(s)	1397
PvuII	CAGCTG	2 cut(s)	1475, 1886
RsaI	GTAC	3 cut(s)	295, 434, 1953
RsaNI	GTAC	3 cut(s)	294, 433, 1952
RseI	CAYNNNNRTG	5 cut(s)	893, 1407, 1500, 1518, 1767
SapI	GCTCTTC	1 cut(s)	808
SaqAI	TTAA	5 cut(s)	525, 1053, 1292, 1964, 2114
SatI	GCNGC	4 cut(s)	121, 495, 945, 1916
Sau3AI	GATC	8 cut(s)	48, 66, 243, 538, 1603, 1651, 1719, 1834
Sau96I	GGNCC	1 cut(s)	2023
ScaI	AGTACT	2 cut(s)	295, 1953
SchI	GAGTC	2 cut(s)	1433, 2081
ScrFI	CCNGG	2 cut(s)	1641, 2027
SduI	GDGCHC	1 cut(s)	1996
SfaNI	GCATC	7 cut(s)	428, 498, 661, 1041, 1322, 1467, 1468
SfcI	CTRYAG	2 cut(s)	118, 621
SinI	GGWCC	1 cut(s)	2023
SmiMI	CAYNNNNRTG	5 cut(s)	893, 1407, 1500, 1518, 1767
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
SsiI	CCGC	2 cut(s)	138, 594
SspMI	CTAG	2 cut(s)	327, 668
StyD4I	CCNGG	2 cut(s)	1639, 2025
StyI	CCWWGG	4 cut(s)	1075, 1408, 1941, 1987
TaiI	ACGT	5 cut(s)	237, 423, 943, 1300, 1348
TaqI	TCGA	6 cut(s)	65, 359, 381, 779, 1007, 1722
TatI	WGTACW	2 cut(s)	293, 1951
TfiI	GAWTC	5 cut(s)	34, 590, 900, 967, 1312
Tru1I	TTAA	5 cut(s)	525, 1053, 1292, 1964, 2114
Tru9I	TTAA	5 cut(s)	525, 1053, 1292, 1964, 2114
TseFI	GTSAC	4 cut(s)	217, 457, 1584, 2095
TseI	GCWGC	4 cut(s)	120, 494, 944, 1915
Tsp45I	GTSAC	4 cut(s)	217, 457, 1584, 2095
TspDTI	ATGAA	8 cut(s)	17, 762, 1257, 1289, 1386, 1484, 1995, 2058
TspGWI	ACGGA	1 cut(s)	450
Van91I	CCANNNNNTGG	1 cut(s)	1844
VneI	GTGCAC	1 cut(s)	1992
VpaK11BI	GGWCC	1 cut(s)	2023
VspI	ATTAAT	1 cut(s)	525
XapI	RAATTY	7 cut(s)	4, 270, 746, 1144, 1777, 1803, 2062
XceI	RCATGY	2 cut(s)	225, 792
XspI	CTAG	2 cut(s)	327, 668
ZrmI	AGTACT	2 cut(s)	295, 1953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.