Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004888

Physical Location & Seq

Genomic Coordinates Forward (+)

31991630 .. 31999256

Gene Structure 7627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G016310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGACTAGATATGAGGGCCCTAATATCCTACACTTCTGGGATTACCCCCTCCTCAGCCAACCTATTACCTGCGGGGGCGTCAAAAGCAACATCTCTTACCCCTTTTGGGGAGCGAACCGAGCCGAATACTGTGGCAAATCTGGGTTTGAGGTCACATGCGAAGCCAACGTCTCAATGATCACCATGAGGAATATCAAGTTCAGAATTCTTGCCATGAGCAATAGTAGTACTGCTACAACAACTCCTACCGTAAAAGTTGCCAGGCAGGATTACTGGGAAGATATCTGTCCCTTGACATATGTTTCCACAACCCTCAACTTCTCTCTCTTCACTTACTCTTCTGGACTTCAGAACGTGTCTTTTTACTACGGATGCAATACAACCATTACATCCATAGGTAATTCGTATCCCTGCAACAGTAGCGTTACCGCTTCCTATCTTACGAGAACTAGTGCTGTCCCAGTTGATCCAGTTAGTACGGGCGCCTGTCAATATGAGGTTTTGGTTCCGGTATCTGAATCCGCTTCTGCGGCTCTGGAGAGCAAGAGTATAGATATTCAGACTGCGATAGATGGTGGTTTTGAATTGAATGTGGTAAATGCTGATACTGGCCTGTGCGACAATTGCTTGGCATCAGGGGGAGTTTGTGGGCAAAGCACTACTGGTGCCAACGAATTCATGTGCTTTTGCCAGACTACATCTTCGACAACCACATGTACTGAAAGCTCTTCACCATCTCCAAATCCAGCTCCATCCAATTCAGGAAAGAATAATCAAATACCAATAGGTCTTGCTGTTGGAGGTGCAATCCTTTTTGGCATTTTCGTGGGATTCTACGCATATTTTGTCATCCAGCGAAAGAAGAAGAAACGTGCAGCAGAAGCTCAGAGCAAAGAGATTCCCACCCCACTTACAAGCAAAAGCACTGTTACTCCCTCGACTAATCTTTCTCAATCTCAAAGCATCCCTTCTTATCCTTCCTTTAACTCAAAATCAAGGTCTGACCTTGGAAAAGCCAGCACTTACTTTGGAGTTCAGGTCTTCAGCTATGCTGAATTAGAGGAAGCCACTGAAAATTTCAACCCTGCTAAAGAACTTGGAGATGGAGGCTTTGGCACCGTTTACTATGGTAAGCTACATGATGGCCGTGTAGTTGCAGTGAAGCGCCTTTATGAAAACAATTTCAAACGGGTGGAGCAGTTTATGAATGAGGTTGAAATCTTAACACGTCTGGAACACCAGCATCTTGTGAAACTCTATGGATGCACCTCAAGACGTAGCCGAGAACTCCTCCTTGTCTATGAATATATTTCTAATGGAACAGTGGCTGACCATCTCCATGGAAAACGAATGGAGTCTGGCTTTCTCAGTTGGCCTGTTAGATTGAGCATTGCCATAGAGACAGCTGATGCACTGGCTTTCCTTCATCGCAATGATGTGATACACCGTGATGTCAAAACCAACAATATACTTCTGGATGACGACTTTTGTGTGAAAGTTGCTGATTTTGGTTTGTCACGGTTGTTCCCCAATGATCAGACCCATGTGTCAACTGCTCCACAAGGGACGCCGGGCTATGTTGATCCCGAGTATTACCAGTGCTATCAACTGACTGACAAAAGTGATGTTTATAGCTTTGGGGTGGTCTTGATCGAGCTTATATCATCCTTACAAGCTGTCGACACCAACAGGCACCGGCATGATATAAATTTGGCCAACATGGCTATTAACAAAATTCAAAATCATTTGGTGAATGAGTTGGTTGATCCACTTCTTGGGTATGACAAGGACTATTCTGTGAGGATAATGGCAACAGCTGTTGCAGAATTGGCCTTCCGGTGTTTGCAGCAGGAGAAAGATATGAGACCAACCATGGAAGAAGTACTGGAGGGTTTAAAAGCAATTCAAAATGAAGACCTTGGTGCACAAGAAAATGGGGAGGCAGAGGCAGTGGTCCTGGATATAGGAGCTGATGAAGTTGGGCTTTTGAGGAATTTGCCTCCCCCACTCTCACCAGACTCAGTTGTCACTGATAAATTGGTTAGCAGCTCTCCCACACCTAGTTCCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

690

Amino Acids

75.67

Weight (kDa)

5.18

Isoelectric Point (pI)

40.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	23 - 77	2.2e-11	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	157 - 231	6.1e-12	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	362 - 630	1.2e-48	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	363 - 631	1.1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004888)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66880 AT1G66880 AT1G66880 AT5G38210 AT5G38210 AT5G38210
fragaria_vesca	FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540 FvH4_2g12540
malus_domestica	MD00G1204100.v1.1 MD09G1255300.v1.1 MD17G1247800.v1.1 MD17G1248000.v1.1
prunus_persica	Prupe.3G146500_v2.0.a1 Prupe.3G146700_v2.0.a1
pyrus_communis	pycom09g17110 pycom17g24910 pycom17g25040
rosa_chinensis	RchiOBHm_Chr6g0273041
rosa_laevigata	RLG00000013645
rosa_multiflora	Rmu_ssc0000387.1_g000003
rosa_roxburghii	Rroxscaffold_7G00195700
rosa_rugosa	Rorug06G0072500
rosa_samantha	Rh6AG188100 Rh6BG191500 Rh6CG190600 Rh6DG182000
rosa_wichuraiana	Rw6G016310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1546, 2024
Acc36I	ACCTGC	1 cut(s)	77
AccB1I	GGYRCC	4 cut(s)	482, 665, 1115, 1692
AccB7I	CCANNNNNTGG	1 cut(s)	1775
AccI	GTMKAC	1 cut(s)	1680
AciI	CCGC	4 cut(s)	72, 429, 522, 530
AclWI	GGATC	3 cut(s)	461, 1577, 1760
AcoI	YGGCCR	2 cut(s)	1144, 1713
AcsI	RAATTY	6 cut(s)	204, 674, 1075, 1708, 1734, 1993
AcuI	CTGAAG	2 cut(s)	332, 1027
AcyI	GRCGYC	3 cut(s)	78, 483, 1568
AfaI	GTAC	4 cut(s)	229, 478, 718, 1884
AfiI	CCNNNNNNNGG	3 cut(s)	106, 107, 1775
AflIII	ACRYGT	3 cut(s)	354, 713, 1226
AgsI	TTSAA	7 cut(s)	584, 589, 1081, 1186, 1217, 1739, 1907
AhlI	ACTAGT	1 cut(s)	449
AjiI	CACGTC	1 cut(s)	1229
AjnI	CCWGG	2 cut(s)	260, 1956
Alw21I	GWGCWC	1 cut(s)	1927
Alw26I	GTCTC	3 cut(s)	175, 1394, 1858
Alw44I	GTGCAC	1 cut(s)	1923
AlwI	GGATC	3 cut(s)	461, 1577, 1760
AlwNI	CAGNNNCTG	1 cut(s)	1328
Ama87I	CYCGRG	1 cut(s)	1586
AoxI	GGCC	6 cut(s)	16, 610, 1144, 1373, 1713, 1830
ApaI	GGGCCC	1 cut(s)	20
ApaLI	GTGCAC	1 cut(s)	1923
ApeKI	GCWGC	3 cut(s)	875, 1846, 2046
ApoI	RAATTY	6 cut(s)	204, 674, 1075, 1708, 1734, 1993
ArsI	GACNNNNNNTTYG	6 cut(s)	153, 185, 685, 717, 983, 1015
AspLEI	GCGC	2 cut(s)	485, 1167
AspS9I	GGNCC	3 cut(s)	16, 17, 1954
AsuC2I	CCSGG	1 cut(s)	1572
AsuHPI	GGTGA	4 cut(s)	172, 723, 1762, 2004
AvaI	CYCGRG	1 cut(s)	1586
AvaII	GGWCC	1 cut(s)	1954
BaeGI	GKGCMC	2 cut(s)	20, 1927
BalI	TGGCCA	1 cut(s)	1715
BanI	GGYRCC	4 cut(s)	482, 665, 1115, 1692
BanII	GRGCYC	1 cut(s)	20
BbsI	GAAGAC	2 cut(s)	1033, 1920
Bbv12I	GWGCWC	1 cut(s)	1927
BbvCI	CCTCAGC	1 cut(s)	53
BbvI	GCAGC	3 cut(s)	887, 1858, 2058
BccI	CCATC	6 cut(s)	566, 742, 760, 1097, 1136, 1341
BceAI	ACGGC	1 cut(s)	1131
BciT130I	CCWGG	2 cut(s)	262, 1958
BciVI	GTATCC	1 cut(s)	417
BclI	TGATCA	2 cut(s)	177, 1534
BcnI	CCSGG	1 cut(s)	1572
BcoDI	GTCTC	3 cut(s)	175, 1394, 1858
BcuI	ACTAGT	1 cut(s)	449
BfaI	CTAG	3 cut(s)	6, 450, 2061
BfoI	RGCGCY	2 cut(s)	486, 1168
BfuAI	ACCTGC	1 cut(s)	77
BfuI	GTATCC	1 cut(s)	417
BglI	GCCNNNNNGGC	1 cut(s)	1721
BisI	GCNGC	4 cut(s)	531, 876, 1847, 2047
BlsI	GCNGC	4 cut(s)	532, 877, 1848, 2048
BmcAI	AGTACT	2 cut(s)	229, 1884
Bme1390I	CCNGG	3 cut(s)	262, 1572, 1958
Bme18I	GGWCC	1 cut(s)	1954
BmeT110I	CYCGRG	1 cut(s)	1586
BmgBI	CACGTC	1 cut(s)	1229
BmgT120I	GGNCC	3 cut(s)	16, 17, 1954
BmiI	GGNNCC	6 cut(s)	18, 484, 507, 667, 1117, 1694
BmrFI	CCNGG	3 cut(s)	262, 1572, 1958
BmrI	ACTGGG	2 cut(s)	283, 455
BmsI	GCATC	6 cut(s)	362, 641, 972, 1252, 1253, 1399
BmuI	ACTGGG	2 cut(s)	283, 455
BpiI	GAAGAC	2 cut(s)	1033, 1920
BplI	GAGNNNNNCTC	2 cut(s)	1275, 1307
BpmI	CTGGAG	2 cut(s)	557, 1907
Bpu10I	CCTNAGC	1 cut(s)	53
BpuEI	CTTGAG	1 cut(s)	1255
BpuMI	CCSGG	1 cut(s)	1572
BsaHI	GRCGYC	3 cut(s)	78, 483, 1568
BsaI	GGTCTC	1 cut(s)	1858
BsaJI	CCNNGG	4 cut(s)	1006, 1339, 1872, 1918
BsaWI	WCCGGW	2 cut(s)	508, 1836
BsaXI	ACNNNNNCTCC	6 cut(s)	226, 256, 916, 946, 1023, 1053
Bsc4I	CCNNNNNNNGG	3 cut(s)	106, 107, 1775
Bse118I	RCCGGY	1 cut(s)	1695
Bse1I	ACTGG	8 cut(s)	278, 461, 470, 613, 667, 1419, 1597, 1890
Bse3DI	GCAATG	2 cut(s)	1389, 1438
BseBI	CCWGG	2 cut(s)	262, 1958
BseDI	CCNNGG	4 cut(s)	1006, 1339, 1872, 1918
BseGI	GGATG	8 cut(s)	377, 389, 752, 849, 963, 1268, 1483, 1664
BseLI	CCNNNNNNNGG	3 cut(s)	106, 107, 1775
BseMI	GCAATG	2 cut(s)	1389, 1438
BseMII	CTCAG	4 cut(s)	67, 899, 1381, 2034
BseNI	ACTGG	8 cut(s)	278, 461, 470, 613, 667, 1419, 1597, 1890
BseRI	GAGGAG	2 cut(s)	41, 1280
BseSI	GKGCMC	2 cut(s)	20, 1927
BseXI	GCAGC	3 cut(s)	887, 1858, 2058
BsgI	GTGCAG	1 cut(s)	894
BshFI	GGCC	6 cut(s)	18, 612, 1146, 1375, 1715, 1832
BshNI	GGYRCC	4 cut(s)	482, 665, 1115, 1692
BsiHKAI	GWGCWC	1 cut(s)	1927
BsiHKCI	CYCGRG	1 cut(s)	1586
BsiSI	CCGG	4 cut(s)	509, 1571, 1696, 1837
BslFI	GGGAC	3 cut(s)	273, 443, 1579
BslI	CCNNNNNNNGG	3 cut(s)	106, 107, 1775
BsmAI	GTCTC	3 cut(s)	175, 1394, 1858
BsmBI	CGTCTC	1 cut(s)	175
BsmFI	GGGAC	3 cut(s)	273, 443, 1579
BsnI	GGCC	6 cut(s)	18, 612, 1146, 1375, 1715, 1832
Bso31I	GGTCTC	1 cut(s)	1858
BsoBI	CYCGRG	1 cut(s)	1586
Bsp120I	GGGCCC	1 cut(s)	16
Bsp1286I	GDGCHC	2 cut(s)	20, 1927
Bsp143I	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
Bsp19I	CCATGG	2 cut(s)	1339, 1872
BspACI	CCGC	4 cut(s)	72, 429, 522, 530
BspANI	GGCC	6 cut(s)	18, 612, 1146, 1375, 1715, 1832
BspCNI	CTCAG	4 cut(s)	66, 898, 1380, 2033
BspLI	GGNNCC	6 cut(s)	18, 484, 507, 667, 1117, 1694
BspMI	ACCTGC	1 cut(s)	77
BspPI	GGATC	3 cut(s)	461, 1577, 1760
BspQI	GCTCTTC	1 cut(s)	733
BspT107I	GGYRCC	4 cut(s)	482, 665, 1115, 1692
BspTNI	GGTCTC	1 cut(s)	1858
BsrDI	GCAATG	2 cut(s)	1389, 1438
BsrFI	RCCGGY	1 cut(s)	1695
BsrI	ACTGG	8 cut(s)	278, 461, 470, 613, 667, 1419, 1597, 1890
BssAI	RCCGGY	1 cut(s)	1695
BssECI	CCNNGG	4 cut(s)	1006, 1339, 1872, 1918
BssMI	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
BssNI	GRCGYC	3 cut(s)	78, 483, 1568
BssT1I	CCWWGG	4 cut(s)	1006, 1339, 1872, 1918
Bst2UI	CCWGG	2 cut(s)	262, 1958
Bst4CI	ACNGT	8 cut(s)	131, 250, 419, 928, 1120, 1324, 1448, 1521
Bst6I	CTCTTC	3 cut(s)	332, 343, 733
BstACI	GRCGYC	3 cut(s)	78, 483, 1568
BstC8I	GCNNGC	1 cut(s)	1018
BstDEI	CTNAG	4 cut(s)	53, 885, 1367, 2020
BstDSI	CCRYGG	2 cut(s)	1339, 1872
BstF5I	GGATG	8 cut(s)	377, 389, 752, 849, 963, 1268, 1483, 1664
BstH2I	RGCGCY	2 cut(s)	486, 1168
BstHHI	GCGC	2 cut(s)	485, 1167
BstKTI	GATC	6 cut(s)	180, 469, 1537, 1585, 1653, 1768
BstMAI	GTCTC	3 cut(s)	175, 1394, 1858
BstMBI	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
BstMWI	GCNNNNNNNGC	8 cut(s)	84, 119, 420, 530, 624, 881, 1721, 1829
BstNI	CCWGG	2 cut(s)	262, 1958
BstNSI	RCATGY	2 cut(s)	159, 717
BstSCI	CCNGG	3 cut(s)	260, 1570, 1956
BstSLI	GKGCMC	2 cut(s)	20, 1927
BstV1I	GCAGC	3 cut(s)	887, 1858, 2058
BstV2I	GAAGAC	2 cut(s)	1033, 1920
BstXI	CCANNNNNNTGG	1 cut(s)	1340
BsuI	GTATCC	1 cut(s)	417
BsuRI	GGCC	6 cut(s)	18, 612, 1146, 1375, 1715, 1832
BtgI	CCRYGG	2 cut(s)	1339, 1872
BtgZI	GCGATG	1 cut(s)	1412
BtrI	CACGTC	1 cut(s)	1229
BtsCI	GGATG	8 cut(s)	377, 389, 752, 849, 963, 1268, 1483, 1664
BtsI	GCAGTG	2 cut(s)	1164, 1956
BtsIMutI	CAGTG	8 cut(s)	924, 1068, 1164, 1329, 1412, 1604, 1956, 2028
BveI	ACCTGC	1 cut(s)	77
Cac8I	GCNNGC	1 cut(s)	1018
CaiI	CAGNNNCTG	1 cut(s)	1328
CfoI	GCGC	2 cut(s)	485, 1167
Cfr10I	RCCGGY	1 cut(s)	1695
Cfr13I	GGNCC	3 cut(s)	16, 17, 1954
CseI	GACGC	2 cut(s)	67, 1576
Csp6I	GTAC	4 cut(s)	228, 477, 717, 1883
CviQI	GTAC	4 cut(s)	228, 477, 717, 1883
DdeI	CTNAG	4 cut(s)	53, 885, 1367, 2020
DinI	GGCGCC	1 cut(s)	484
DpnI	GATC	6 cut(s)	179, 468, 1536, 1584, 1652, 1767
DpnII	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
DraI	TTTAAA	1 cut(s)	1896
DrdI	GACNNNNNNGTC	2 cut(s)	1546, 2024
DseDI	GACNNNNNNGTC	2 cut(s)	1546, 2024
EaeI	YGGCCR	2 cut(s)	1144, 1713
Eam1104I	CTCTTC	3 cut(s)	332, 343, 733
EarI	CTCTTC	3 cut(s)	332, 343, 733
Eco130I	CCWWGG	4 cut(s)	1006, 1339, 1872, 1918
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	1858
Eco32I	GATATC	1 cut(s)	283
Eco47I	GGWCC	1 cut(s)	1954
Eco57I	CTGAAG	2 cut(s)	332, 1027
Eco88I	CYCGRG	1 cut(s)	1586
EcoO109I	RGGNCCY	2 cut(s)	16, 17
EcoRI	GAATTC	2 cut(s)	204, 674
EcoRII	CCWGG	2 cut(s)	260, 1956
EcoRV	GATATC	1 cut(s)	283
EcoT14I	CCWWGG	4 cut(s)	1006, 1339, 1872, 1918
EcoT38I	GRGCYC	1 cut(s)	20
EgeI	GGCGCC	1 cut(s)	484
EheI	GGCGCC	1 cut(s)	484
ErhI	CCWWGG	4 cut(s)	1006, 1339, 1872, 1918
Esp3I	CGTCTC	1 cut(s)	175
FalI	AAGNNNNNCTT	4 cut(s)	952, 984, 1968, 2000
FaqI	GGGAC	3 cut(s)	273, 443, 1579
FauI	CCCGC	1 cut(s)	65
FauNDI	CATATG	1 cut(s)	298
FbaI	TGATCA	2 cut(s)	177, 1534
FblI	GTMKAC	1 cut(s)	1680
Fnu4HI	GCNGC	4 cut(s)	531, 876, 1847, 2047
FokI	GGATG	8 cut(s)	376, 384, 739, 836, 950, 1275, 1490, 1651
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	4 cut(s)	531, 876, 1847, 2047
FspBI	CTAG	3 cut(s)	6, 450, 2061
GlaI	GCGC	2 cut(s)	484, 1166
GluI	GCNGC	4 cut(s)	531, 876, 1847, 2047
GsuI	CTGGAG	2 cut(s)	557, 1907
HaeII	RGCGCY	2 cut(s)	486, 1168
HaeIII	GGCC	6 cut(s)	18, 612, 1146, 1375, 1715, 1832
HapII	CCGG	4 cut(s)	509, 1571, 1696, 1837
HgaI	GACGC	2 cut(s)	67, 1576
HhaI	GCGC	2 cut(s)	485, 1167
Hin1I	GRCGYC	3 cut(s)	78, 483, 1568
Hin6I	GCGC	2 cut(s)	483, 1165
HinP1I	GCGC	2 cut(s)	483, 1165
HincII	GTYRAC	2 cut(s)	1551, 1681
HindII	GTYRAC	2 cut(s)	1551, 1681
HinfI	GANTC	5 cut(s)	518, 831, 898, 1355, 2018
HpaII	CCGG	4 cut(s)	509, 1571, 1696, 1837
HphI	GGTGA	4 cut(s)	172, 723, 1762, 2004
Hpy166II	GTNNAC	4 cut(s)	1123, 1551, 1681, 1925
Hpy188I	TCNGA	7 cut(s)	203, 351, 517, 561, 888, 1003, 1539
Hpy188III	TCNNGA	8 cut(s)	342, 536, 762, 1232, 1272, 1475, 1586, 1648
Hpy8I	GTNNAC	4 cut(s)	1123, 1551, 1681, 1925
HpyAV	CCTTC	4 cut(s)	978, 987, 1433, 1843
HpyCH4III	ACNGT	8 cut(s)	131, 250, 419, 928, 1120, 1324, 1448, 1521
HpyCH4IV	ACGT	5 cut(s)	168, 354, 871, 1228, 1276
HpyF10VI	GCNNNNNNNGC	8 cut(s)	84, 119, 420, 530, 624, 881, 1721, 1829
HpyF3I	CTNAG	4 cut(s)	53, 885, 1367, 2020
HpySE526I	ACGT	5 cut(s)	168, 354, 871, 1228, 1276
Hsp92I	GRCGYC	3 cut(s)	78, 483, 1568
HspAI	GCGC	2 cut(s)	483, 1165
KasI	GGCGCC	1 cut(s)	482
Ksp22I	TGATCA	2 cut(s)	177, 1534
Kzo9I	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
LguI	GCTCTTC	1 cut(s)	733
LmnI	GCTCC	5 cut(s)	110, 754, 1195, 1561, 1967
Lsp1109I	GCAGC	3 cut(s)	887, 1858, 2058
LweI	GCATC	6 cut(s)	362, 641, 972, 1252, 1253, 1399
MaeI	CTAG	3 cut(s)	6, 450, 2061
MaeII	ACGT	5 cut(s)	168, 354, 871, 1228, 1276
MaeIII	GTNAC	5 cut(s)	151, 424, 928, 1515, 2026
MalI	GATC	6 cut(s)	179, 468, 1536, 1584, 1652, 1767
MboI	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
MfeI	CAATTG	1 cut(s)	622
MhlI	GDGCHC	2 cut(s)	20, 1927
MlsI	TGGCCA	1 cut(s)	1715
MluNI	TGGCCA	1 cut(s)	1715
Mly113I	GGCGCC	1 cut(s)	483
MlyI	GAGTC	2 cut(s)	1364, 2012
MmeI	TCCRAC	1 cut(s)	778
Mox20I	TGGCCA	1 cut(s)	1715
MscI	TGGCCA	1 cut(s)	1715
MseI	TTAA	4 cut(s)	984, 1223, 1728, 1895
MslI	CAYNNNNRTG	5 cut(s)	824, 1338, 1431, 1449, 1698
Msp20I	TGGCCA	1 cut(s)	1715
MspA1I	CMGCKG	2 cut(s)	1406, 1817
MspI	CCGG	4 cut(s)	509, 1571, 1696, 1837
MspR9I	CCNGG	3 cut(s)	262, 1572, 1958
MunI	CAATTG	1 cut(s)	622
MvaI	CCWGG	2 cut(s)	262, 1958
MwoI	GCNNNNNNNGC	8 cut(s)	84, 119, 420, 530, 624, 881, 1721, 1829
NarI	GGCGCC	1 cut(s)	483
NciI	CCSGG	1 cut(s)	1572
NcoI	CCATGG	2 cut(s)	1339, 1872
NdeI	CATATG	1 cut(s)	298
NdeII	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
NlaIV	GGNNCC	6 cut(s)	18, 484, 507, 667, 1117, 1694
NmeAIII	GCCGAG	1 cut(s)	1307
NmuCI	GTSAC	3 cut(s)	151, 1515, 2026
NspI	RCATGY	2 cut(s)	159, 717
PciI	ACATGT	1 cut(s)	713
PciSI	GCTCTTC	1 cut(s)	733
PfeI	GAWTC	3 cut(s)	518, 831, 898
PflMI	CCANNNNNTGG	1 cut(s)	1775
PfoI	TCCNGGA	1 cut(s)	1956
PkrI	GCNGC	4 cut(s)	532, 877, 1848, 2048
PleI	GAGTC	2 cut(s)	1363, 2012
PluTI	GGCGCC	1 cut(s)	486
PpsI	GAGTC	2 cut(s)	1363, 2012
PscI	ACATGT	1 cut(s)	713
Psp6I	CCWGG	2 cut(s)	260, 1956
PspGI	CCWGG	2 cut(s)	260, 1956
PspN4I	GGNNCC	6 cut(s)	18, 484, 507, 667, 1117, 1694
PspOMI	GGGCCC	1 cut(s)	16
PspPI	GGNCC	3 cut(s)	16, 17, 1954
PstNI	CAGNNNCTG	1 cut(s)	1328
PvuII	CAGCTG	2 cut(s)	1406, 1817
RsaI	GTAC	4 cut(s)	229, 478, 718, 1884
RsaNI	GTAC	4 cut(s)	228, 477, 717, 1883
RseI	CAYNNNNRTG	5 cut(s)	824, 1338, 1431, 1449, 1698
SalI	GTCGAC	1 cut(s)	1679
SapI	GCTCTTC	1 cut(s)	733
SaqAI	TTAA	4 cut(s)	984, 1223, 1728, 1895
SatI	GCNGC	4 cut(s)	531, 876, 1847, 2047
Sau3AI	GATC	6 cut(s)	177, 466, 1534, 1582, 1650, 1765
Sau96I	GGNCC	3 cut(s)	16, 17, 1954
ScaI	AGTACT	2 cut(s)	229, 1884
SchI	GAGTC	2 cut(s)	1364, 2012
ScrFI	CCNGG	3 cut(s)	262, 1572, 1958
SduI	GDGCHC	2 cut(s)	20, 1927
SfaNI	GCATC	6 cut(s)	362, 641, 972, 1252, 1253, 1399
SfoI	GGCGCC	1 cut(s)	484
SinI	GGWCC	1 cut(s)	1954
SmiMI	CAYNNNNRTG	5 cut(s)	824, 1338, 1431, 1449, 1698
SmlI	CTYRAG	1 cut(s)	1270
SmoI	CTYRAG	1 cut(s)	1270
SpeI	ACTAGT	1 cut(s)	449
SsiI	CCGC	4 cut(s)	72, 429, 522, 530
SspDI	GGCGCC	1 cut(s)	482
SspMI	CTAG	3 cut(s)	6, 450, 2061
StyD4I	CCNGG	3 cut(s)	260, 1570, 1956
StyI	CCWWGG	4 cut(s)	1006, 1339, 1872, 1918
TaaI	ACNGT	8 cut(s)	131, 250, 419, 928, 1120, 1324, 1448, 1521
TaiI	ACGT	5 cut(s)	171, 357, 874, 1231, 1279
TaqI	TCGA	4 cut(s)	704, 938, 1653, 1680
TatI	WGTACW	3 cut(s)	227, 716, 1882
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	3 cut(s)	518, 831, 898
Tru1I	TTAA	4 cut(s)	984, 1223, 1728, 1895
Tru9I	TTAA	4 cut(s)	984, 1223, 1728, 1895
TscAI	CASTG	8 cut(s)	931, 1075, 1164, 1329, 1419, 1604, 1956, 2035
TseFI	GTSAC	3 cut(s)	151, 1515, 2026
TseI	GCWGC	3 cut(s)	875, 1846, 2046
Tsp45I	GTSAC	3 cut(s)	151, 1515, 2026
TspDTI	ATGAA	7 cut(s)	667, 1188, 1220, 1317, 1415, 1926, 1989
TspGWI	ACGGA	1 cut(s)	384
TspRI	CASTG	8 cut(s)	931, 1075, 1164, 1329, 1419, 1604, 1956, 2035
Van91I	CCANNNNNTGG	1 cut(s)	1775
VneI	GTGCAC	1 cut(s)	1923
VpaK11BI	GGWCC	1 cut(s)	1954
XapI	RAATTY	6 cut(s)	204, 674, 1075, 1708, 1734, 1993
XceI	RCATGY	2 cut(s)	159, 717
XmiI	GTMKAC	1 cut(s)	1680
XspI	CTAG	3 cut(s)	6, 450, 2061
ZrmI	AGTACT	2 cut(s)	229, 1884

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.