Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Reverse (-)

8177419 .. 8187478

Gene Structure 10060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGAAGGCCTTGAATAGCATAGAGGATCTGATCGAGGAGATAAAGCTTCGAGTGGTTTGGTGGGCCCTGTTTGTCTTCTGTGTTACCTACTTCCTTTCCTATTCGAGTAAATCAATGTGGATGAATTTACCCTTATCAATTGTATTGGTTTCGATGTTACGTATTCTATTGAATAATGTGGAATTCCGTTGGAAGGGTCAAAAACCTGTTCGCCCACAGTCATACTTGTCTCATCTGGAGAAGAAACAGTTGTCCTTGAATGATCCACGACTTTCTACTGGGCCTCCACCACCAAAGTGGAAAAGGAAAATTGGTTCTCCAATTGTAGAGGACGCAATGAAAGATTTCATTGACAAACTTTTGAAGGATTTCGTGACTGATTTGTGGTACTCAGATATTACTCCGGACAAGGAGGCTCCAGAGCAGATACGCGCGATAATCATGGATGCTCTGGGTGAAGTTTCCAGAAGAGTTAAAGAGATAAACCTTGTTGACTTGCTAACAAGGGATATTATTGATTTAATAGGGGATCATATAGAACTTTTTAGAAGAAACCAAGCAGCTATAGGCGTTGATGTTATGAAAACGTTGTCTTCAGAGGAGAGAGATGAAAGGTTAAAACATCATCTCATGGCTTCAAAGGAGCTCCATCCTGCATTGATTTCACCTGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGGGTGGGGTATTAGCTGTGGTGCTAAGACCACGAGAAGCTCAATGTCCAGTGAAAGAGAGAGTTAGATCTATTGCCAGAGAACTTCTAACAAGCTTAGTAATTCAACCTATTTTGAATTTTGCGAGCCCTGGGTATATCAATGAATTGATAGAATATATTTTGCTAGCCGTTAAAGAGGAAATCAGTAAAGTGGTAAGTGGGGACCAGTCAGCTGCAGGGAGTGTACATGATCAAGATTCTCCGTTGAGGAAATATGCAACCTTTAATCAAAACACTGATTTGACATTGGCTGAAGTTGACAATCAGAGAGAAGTGTTTTCAGATTATAATAAATCCCCGGAAGATCCTTTGCAGCCACGGCCTGCTGACTGGGCACGAGTTTTGGAGGCTGCAACACAGAGAAGGACTGAAGTTCTTGCTCCTGAAAATCTAGAAAATATGTGGACAAAAGGGAGAAATTACAAACGTAAAGAGCACAAGAAAAAGATAAGAGGAGTTCAGGAACCTATACCTGAGTGTTCTGGAATAGATAGTGCTGTTCCTGCTAGAAATCTGGGGAAAGAAATGGTGGCTGACAGGCATGAAATTTCTACAGGAATAGAAGATAGATCTATTGTGAAGCTAAAATGTGAATTAAGTTTAGACACTCAATTAAGTACTGGGACCAAAAAGGAGATGCAGTTCTCATTGGACCCCAGTAAAGAATCATTTACTGATCCAGGGCATCTTGTTAATAAATTGGAGGACATTGGAAACCTTGCGTCTGATGGAAGTAAAAGTAGGCTTAAAAGATCAAATAGCACTTCTGCTTTGAAAATCCAACAAGACACAAAAATAGCATTGACAGAAGGTGGAGGGTCTATCATATCAGAGTTCTATAGCCCTGGGTTTGGCGGGCATAGAGAAGACCATATTAGTAAGAGTGCCTCAGATATGGTAGTCCACAGTGTGGGACAACAAGTTCCCAAGCTCAGGTGCCGGGTTATGGGAGCATACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTTACAGATTCAGAAAACAGAACTTGGTTTGTGAAAAGAAGATATAGAAATTTTGAACGACTGCATCGCCATCTTAAAGACATTCCAAATTACACATTACATCTACCACCCAAAAGAATATTCTCGTCAAGCACAGAGGATGCTTTTGTTCATCAGCGATGTATTCAGCTAGACAAATATCTACAGGATCTATTGTCAATAGCTAATGTTGCTGAACAGCATGAAGTGTGGGATTTTTTAAGTGGTTCGTCAAAGAATTACTCGTTTGGAAAATCCCCCTCCGTGATGAGAACTCTTGCAGTCAATGTGGATGATGCTGTGGATGACATCGTACGCCAGTTCAAAGGGGTTTCAGATGGGTTAATGCGTAAGGTTGTTGGTCCCACAGCCGAGTCCTCGTCTTTAATTCCTGGATGGAACTTGTCCGCGAATGCAGATGAGACAGGTGTACTTGCTTTTAGGCAAAATACAGCAGAGTCAACAAATAGCTTTTCAGATAACGAGGAAGGTGATAAAGATAGAAGTTGTGACCCTGTAGAAAATGGGTGGCATTCAGACAATGAATTGAATTCCAAGAGCTATCCACCTCGGGTTGTACATACAAGGAGCTTAGGTTTGGAGAAAGCTTATTTAGTTGGCGAGGGTGGCTTTCTGGAGGATCCAGTTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGCGTGCCTCTGTTGAATCTAGTGGACAAGGTGTTTCAACTAAAAAAAAGGGGCTGGCTGAGAAGACAGGTCTTTTGGATGTCAAAACAAATACTGCAGTTAATGATGGAGGATGCTATTGATGACTGGCTCATGAGGCAGATTCATTGGCTTCGGAGGGAGGATGTTATTGCTTCGGGAATTTATTGGCTTAAAGATGTTCTGTGGCCCAATGGCACATTCTTCCTTAGAATCGGCAATGTTCAAGATGACAACCAAAACCCTCTTCATAATGCAAGTCAGCTTGGTGGAAGTAAGGCTGGTAAACCGGGGTCTTTTGAGCAGCAGCTTGAGGCTGCTCGTAGAGCTAGTGACATCAAGAAAATGCTCTTTGATGGAACTCCGACGGCCTTGGTCAGCTTAATTGGGCATAAGCAGTACAGACGTTGTGCAAGAGACATTTATTATTTCACTCAGTCTACTATCTGCATAAAGCAACTTGCATATGCAGTACTTGAACTGTCACTTGTTTCAATTTTCCCTGAGCTGCGGGATCTTGTTGTTGATATTCATCAAAAGATGGGTGTTGATCAAACTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1008

Amino Acids

114.25

Weight (kDa)

7.11

Isoelectric Point (pI)

46.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PXA	PF02194	106 - 287	9.6e-40	PXA domain
PX	PF00787	585 - 662	1.6e-13	PX domain
Nexin_C	PF08628	833 - 967	3.9e-25	Sorting nexin C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1029
AccB1I	GGYRCC	1 cut(s)	1677
AccB7I	CCANNNNNTGG	1 cut(s)	1651
AccI	GTMKAC	1 cut(s)	2900
AccII	CGCG	3 cut(s)	432, 434, 2171
AccIII	TCCGGA	1 cut(s)	403
AciI	CCGC	4 cut(s)	694, 1596, 2169, 2971
AclI	AACGTT	1 cut(s)	587
AclWI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
AcsI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
AcuI	CTGAAG	4 cut(s)	579, 674, 1014, 1131
AdeI	CACNNNGTG	1 cut(s)	1651
AfaI	GTAC	9 cut(s)	389, 680, 927, 1360, 2076, 2193, 2340, 2861, 2934
AfiI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
AjnI	CCWGG	4 cut(s)	829, 1420, 1585, 2152
AjuI	GAANNNNNNNTTGG	6 cut(s)	1847, 1879, 2645, 2677, 2691, 2723
AleI	CACNNNNGTG	2 cut(s)	295, 2422
AloI	GAACNNNNNNTCC	6 cut(s)	298, 330, 1367, 1399, 1647, 1679
Alw21I	GWGCWC	2 cut(s)	648, 1179
Alw26I	GTCTC	3 cut(s)	234, 2177, 2871
AlwI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
Ama87I	CYCGRG	1 cut(s)	2331
Aor13HI	TCCGGA	1 cut(s)	403
AoxI	GGCC	6 cut(s)	6, 63, 281, 1061, 2648, 2829
ApaI	GGGCCC	1 cut(s)	67
ApeKI	GCWGC	8 cut(s)	560, 914, 1054, 1091, 2764, 2767, 2777, 2968
ApoI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
ArsI	GACNNNNNNTTYG	2 cut(s)	2499, 2531
Asp700I	GAANNNNTTC	2 cut(s)	344, 368
AspLEI	GCGC	1 cut(s)	434
AspS9I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
AsuC2I	CCSGG	3 cut(s)	1040, 1682, 2751
AsuHPI	GGTGA	3 cut(s)	467, 657, 2264
AsuNHI	GCTAGC	1 cut(s)	865
AvaI	CYCGRG	1 cut(s)	2331
AvaII	GGWCC	4 cut(s)	904, 1365, 1393, 2123
BaeGI	GKGCMC	2 cut(s)	67, 1078
BamHI	GGATCC	1 cut(s)	2401
BanI	GGYRCC	1 cut(s)	1677
BanII	GRGCYC	3 cut(s)	67, 648, 830
BauI	CACGAG	2 cut(s)	732, 1077
BbsI	GAAGAC	4 cut(s)	67, 585, 1614, 2512
Bbv12I	GWGCWC	2 cut(s)	648, 1179
BbvI	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
BccI	CCATC	8 cut(s)	657, 1463, 1821, 2093, 2151, 2542, 2810, 2995
BceAI	ACGGC	3 cut(s)	854, 1076, 2844
BciT130I	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BclI	TGATCA	2 cut(s)	931, 3010
BcnI	CCSGG	3 cut(s)	1040, 1682, 2751
BcoDI	GTCTC	3 cut(s)	234, 2177, 2871
BfaI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
BfmI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
BglII	AGATCT	2 cut(s)	767, 1310
BisI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
BlsI	GCNGC	9 cut(s)	562, 696, 916, 1056, 1093, 2766, 2769, 2779, 2970
BmcAI	AGTACT	2 cut(s)	1360, 2934
Bme1390I	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
Bme18I	GGWCC	4 cut(s)	904, 1365, 1393, 2123
BmeT110I	CYCGRG	1 cut(s)	2331
BmgT120I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
BmiI	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
BmrFI	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
BmrI	ACTGGG	4 cut(s)	288, 1081, 1371, 1392
BmsI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
BmtI	GCTAGC	1 cut(s)	869
BmuI	ACTGGG	4 cut(s)	288, 1081, 1371, 1392
BpiI	GAAGAC	4 cut(s)	67, 585, 1614, 2512
BpmI	CTGGAG	3 cut(s)	257, 402, 2417
Bpu10I	CCTNAGC	3 cut(s)	1673, 2353, 2964
BpuEI	CTTGAG	1 cut(s)	2792
BpuMI	CCSGG	3 cut(s)	1040, 1682, 2751
BsaAI	YACGTR	1 cut(s)	161
BsaBI	GATNNNNATC	1 cut(s)	2991
BsaWI	WCCGGW	1 cut(s)	403
BsaXI	ACNNNNNCTCC	6 cut(s)	268, 298, 1367, 1397, 2341, 2371
Bsc4I	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
Bse1I	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
Bse3DI	GCAATG	2 cut(s)	342, 2686
Bse8I	GATNNNNATC	1 cut(s)	2991
BseAI	TCCGGA	1 cut(s)	403
BseBI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BseJI	GATNNNNATC	1 cut(s)	2991
BseLI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
BseMI	GCAATG	2 cut(s)	342, 2686
BseMII	CTCAG	9 cut(s)	405, 660, 1206, 1644, 1687, 2412, 2492, 2909, 2955
BseNI	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
BseRI	GAGGAG	3 cut(s)	50, 614, 1209
BseSI	GKGCMC	2 cut(s)	67, 1078
BseXI	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
Bsh1236I	CGCG	3 cut(s)	432, 434, 2171
BshFI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BshNI	GGYRCC	1 cut(s)	1677
BsiHKAI	GWGCWC	2 cut(s)	648, 1179
BsiHKCI	CYCGRG	1 cut(s)	2331
BsiSI	CCGG	4 cut(s)	404, 1040, 1681, 2750
BsiWI	CGTACG	1 cut(s)	2074
BslFI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
BslI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
BsmAI	GTCTC	3 cut(s)	234, 2177, 2871
BsmFI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
BsmI	GAATGC	3 cut(s)	2179, 2293, 2418
BsnI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BsoBI	CYCGRG	1 cut(s)	2331
Bsp120I	GGGCCC	1 cut(s)	63
Bsp1286I	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
Bsp13I	TCCGGA	1 cut(s)	403
Bsp1407I	TGTACA	2 cut(s)	925, 2338
BspACI	CCGC	4 cut(s)	694, 1596, 2169, 2971
BspANI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BspCNI	CTCAG	9 cut(s)	404, 661, 1207, 1643, 1686, 2413, 2493, 2908, 2956
BspEI	TCCGGA	1 cut(s)	403
BspFNI	CGCG	3 cut(s)	432, 434, 2171
BspHI	TCATGA	1 cut(s)	2574
BspLI	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
BspMAI	CTGCAG	2 cut(s)	919, 2541
BspOI	GCTAGC	1 cut(s)	869
BspPI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
BspT107I	GGYRCC	1 cut(s)	1677
BsrDI	GCAATG	2 cut(s)	342, 2686
BsrGI	TGTACA	2 cut(s)	925, 2338
BsrI	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
BssSI	CACGAG	2 cut(s)	732, 1077
BssT1I	CCWWGG	1 cut(s)	2832
Bst2BI	CACGAG	2 cut(s)	732, 1077
Bst2UI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
Bst4CI	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
Bst6I	CTCTTC	2 cut(s)	463, 2712
BstAUI	TGTACA	2 cut(s)	925, 2338
BstBAI	YACGTR	1 cut(s)	161
BstC8I	GCNNGC	6 cut(s)	826, 867, 1065, 1598, 2447, 2498
BstDSI	CCRYGG	1 cut(s)	1058
BstFNI	CGCG	3 cut(s)	432, 434, 2171
BstHHI	GCGC	1 cut(s)	434
BstMAI	GTCTC	3 cut(s)	234, 2177, 2871
BstMWI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
BstNI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BstSCI	CCNGG	7 cut(s)	829, 1038, 1420, 1585, 1680, 2152, 2749
BstSFI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
BstSLI	GKGCMC	2 cut(s)	67, 1078
BstSNI	TACGTA	1 cut(s)	161
BstUI	CGCG	3 cut(s)	432, 434, 2171
BstV1I	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
BstV2I	GAAGAC	4 cut(s)	67, 585, 1614, 2512
BstX2I	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
BstXI	CCANNNNNNTGG	2 cut(s)	297, 2424
BstYI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
BsuRI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BtgI	CCRYGG	1 cut(s)	1058
BtgZI	GCGATG	2 cut(s)	1793, 1915
BtsIMutI	CAGTG	3 cut(s)	756, 975, 1654
Cac8I	GCNNGC	6 cut(s)	826, 867, 1065, 1598, 2447, 2498
CciI	TCATGA	1 cut(s)	2574
CfoI	GCGC	1 cut(s)	434
Cfr13I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
CseI	GACGC	2 cut(s)	341, 1452
Csp6I	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
CviAII	CATG	6 cut(s)	442, 631, 929, 1283, 1964, 2575
CviQI	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
DraIII	CACNNNGTG	1 cut(s)	1651
Eam1104I	CTCTTC	2 cut(s)	463, 2712
EarI	CTCTTC	2 cut(s)	463, 2712
Ecl136II	GAGCTC	1 cut(s)	646
Eco105I	TACGTA	1 cut(s)	161
Eco130I	CCWWGG	1 cut(s)	2832
Eco147I	AGGCCT	1 cut(s)	8
Eco24I	GRGCYC	3 cut(s)	67, 648, 830
Eco47I	GGWCC	4 cut(s)	904, 1365, 1393, 2123
Eco53kI	GAGCTC	1 cut(s)	646
Eco57I	CTGAAG	4 cut(s)	579, 674, 1014, 1131
Eco88I	CYCGRG	1 cut(s)	2331
EcoICRI	GAGCTC	1 cut(s)	646
EcoO109I	RGGNCCY	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	182, 2311
EcoRII	CCWGG	4 cut(s)	829, 1420, 1585, 2152
EcoT14I	CCWWGG	1 cut(s)	2832
EcoT38I	GRGCYC	3 cut(s)	67, 648, 830
ErhI	CCWWGG	1 cut(s)	2832
FaeI	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
FaqI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
FatI	CATG	6 cut(s)	441, 630, 928, 1282, 1963, 2574
FauI	CCCGC	2 cut(s)	1589, 2964
FauNDI	CATATG	1 cut(s)	2926
FbaI	TGATCA	2 cut(s)	931, 3010
FblI	GTMKAC	1 cut(s)	2900
Fnu4HI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
FriOI	GRGCYC	3 cut(s)	67, 648, 830
Fsp4HI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
FspBI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
GlaI	GCGC	1 cut(s)	433
GluI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
GsuI	CTGGAG	3 cut(s)	257, 402, 2417
HaeIII	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
HapII	CCGG	4 cut(s)	404, 1040, 1681, 2750
HgaI	GACGC	2 cut(s)	341, 1452
HhaI	GCGC	1 cut(s)	434
Hin1II	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
Hin6I	GCGC	1 cut(s)	432
HinP1I	GCGC	1 cut(s)	432
HincII	GTYRAC	3 cut(s)	493, 1000, 2223
HindII	GTYRAC	3 cut(s)	493, 1000, 2223
HindIII	AAGCTT	3 cut(s)	44, 793, 2367
HinfI	GANTC	9 cut(s)	938, 1406, 1751, 2135, 2219, 2428, 2458, 2584, 2673
HpaII	CCGG	4 cut(s)	404, 1040, 1681, 2750
HphI	GGTGA	3 cut(s)	467, 657, 2264
Hpy99I	CGWCG	1 cut(s)	2830
HpyAV	CCTTC	5 cut(s)	187, 358, 1098, 1544, 2243
HpyCH4III	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
HpyCH4IV	ACGT	4 cut(s)	160, 587, 1168, 2866
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
HpySE526I	ACGT	4 cut(s)	160, 587, 1168, 2866
Hsp92II	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
HspAI	GCGC	1 cut(s)	432
Kpn2I	TCCGGA	1 cut(s)	403
Ksp22I	TGATCA	2 cut(s)	931, 3010
LmnI	GCTCC	6 cut(s)	421, 643, 651, 1126, 1691, 2349
Lsp1109I	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
LweI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
MaeI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
MaeII	ACGT	4 cut(s)	160, 587, 1168, 2866
MaeIII	GTNAC	7 cut(s)	82, 156, 373, 1744, 2270, 2792, 2943
MfeI	CAATTG	3 cut(s)	138, 321, 1737
MflI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
MhlI	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
MlyI	GAGTC	3 cut(s)	2144, 2228, 2422
MmeI	TCCRAC	4 cut(s)	170, 1546, 2389, 2849
MroI	TCCGGA	1 cut(s)	403
MroXI	GAANNNNTTC	2 cut(s)	344, 368
MslI	CAYNNNNRTG	2 cut(s)	295, 2422
MspA1I	CMGCKG	2 cut(s)	694, 914
MspI	CCGG	4 cut(s)	404, 1040, 1681, 2750
MspR9I	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
MunI	CAATTG	3 cut(s)	138, 321, 1737
Mva1269I	GAATGC	3 cut(s)	2179, 2293, 2418
MvaI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
MvnI	CGCG	3 cut(s)	432, 434, 2171
MwoI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
NciI	CCSGG	3 cut(s)	1040, 1682, 2751
NdeI	CATATG	1 cut(s)	2926
NheI	GCTAGC	1 cut(s)	865
NlaIII	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
NlaIV	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
NmeAIII	GCCGAG	1 cut(s)	2158
NmuCI	GTSAC	4 cut(s)	373, 2270, 2792, 2943
OliI	CACNNNNGTG	2 cut(s)	295, 2422
PagI	TCATGA	1 cut(s)	2574
PasI	CCCWGGG	2 cut(s)	830, 1586
PceI	AGGCCT	1 cut(s)	8
PctI	GAATGC	3 cut(s)	2179, 2293, 2418
PdmI	GAANNNNTTC	2 cut(s)	344, 368
PfeI	GAWTC	6 cut(s)	938, 1406, 1751, 2458, 2584, 2673
Pfl23II	CGTACG	1 cut(s)	2074
PflMI	CCANNNNNTGG	1 cut(s)	1651
PfoI	TCCNGGA	1 cut(s)	2152
PkrI	GCNGC	9 cut(s)	562, 696, 916, 1056, 1093, 2766, 2769, 2779, 2970
PleI	GAGTC	3 cut(s)	2143, 2227, 2422
PpsI	GAGTC	3 cut(s)	2143, 2227, 2422
Ppu21I	YACGTR	1 cut(s)	161
PsiI	TTATAA	1 cut(s)	1029
Psp124BI	GAGCTC	1 cut(s)	648
Psp1406I	AACGTT	1 cut(s)	587
Psp6I	CCWGG	4 cut(s)	829, 1420, 1585, 2152
PspGI	CCWGG	4 cut(s)	829, 1420, 1585, 2152
PspLI	CGTACG	1 cut(s)	2074
PspN4I	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
PspOMI	GGGCCC	1 cut(s)	63
PspPI	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
PstI	CTGCAG	2 cut(s)	919, 2541
PsuI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
PvuII	CAGCTG	1 cut(s)	914
RsaI	GTAC	9 cut(s)	389, 680, 927, 1360, 2076, 2193, 2340, 2861, 2934
RsaNI	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
RseI	CAYNNNNRTG	2 cut(s)	295, 2422
SacI	GAGCTC	1 cut(s)	648
SatI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
Sau96I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
ScaI	AGTACT	2 cut(s)	1360, 2934
SchI	GAGTC	3 cut(s)	2144, 2228, 2422
ScrFI	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
SduI	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
SfaNI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
SfcI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
SinI	GGWCC	4 cut(s)	904, 1365, 1393, 2123
SmiMI	CAYNNNNRTG	2 cut(s)	295, 2422
SmlI	CTYRAG	1 cut(s)	2771
SmoI	CTYRAG	1 cut(s)	2771
SnaBI	TACGTA	1 cut(s)	161
SseBI	AGGCCT	1 cut(s)	8
SsiI	CCGC	4 cut(s)	694, 1596, 2169, 2971
SspI	AATATT	1 cut(s)	1863
SspMI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
SstI	GAGCTC	1 cut(s)	648
StuI	AGGCCT	1 cut(s)	8
StyD4I	CCNGG	7 cut(s)	829, 1038, 1420, 1585, 1680, 2152, 2749
StyI	CCWWGG	1 cut(s)	2832
TaaI	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
TaiI	ACGT	4 cut(s)	163, 590, 1171, 2869
TaqI	TCGA	4 cut(s)	33, 49, 104, 152
TatI	WGTACW	7 cut(s)	678, 925, 1358, 2191, 2338, 2859, 2932
TauI	GCSGC	1 cut(s)	697
TfiI	GAWTC	6 cut(s)	938, 1406, 1751, 2458, 2584, 2673
TscAI	CASTG	3 cut(s)	756, 982, 1654
TseFI	GTSAC	4 cut(s)	373, 2270, 2792, 2943
TseI	GCWGC	8 cut(s)	560, 914, 1054, 1091, 2764, 2767, 2777, 2968
Tsp45I	GTSAC	4 cut(s)	373, 2270, 2792, 2943
TspGWI	ACGGA	3 cut(s)	176, 933, 2014
TspRI	CASTG	3 cut(s)	756, 982, 1654
Van91I	CCANNNNNTGG	1 cut(s)	1651
VpaK11BI	GGWCC	4 cut(s)	904, 1365, 1393, 2123
XapI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
XbaI	TCTAGA	1 cut(s)	1132
XcmI	CCANNNNNNNNNTGG	1 cut(s)	294
XmiI	GTMKAC	1 cut(s)	2900
XmnI	GAANNNNTTC	2 cut(s)	344, 368
XspI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
ZrmI	AGTACT	2 cut(s)	1360, 2934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.