Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004782

Physical Location & Seq

Genomic Coordinates Reverse (-)

11079691 .. 11089059

Gene Structure 9369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3099 bp

ATGTTGAACTTCGGTGGAAAATATGAGAATTATTTTTCCAGACATCGTGTCACACATATCATTTGCAGTAATCTGCCTGACAGCAAAATTAAAAATTTGAGGTCTTTTAGTGGAGGTCTCCCAGTGGTGAAACCCTCCTGGATATTAGATTCAGTTGCTGCTAACAAACTCTTGAGTTGGGTTCCTTACCAACTTGAACAGATTGCTTGCAACCAACCATTGCTGTCAGCCTTCTTTTCCCCAAAAGTAATCCCGGACTCTGGCGATCCTTTGGGAGATGCTGCTAATCAAGTAACATATGAAAGTGAGGTTACATTGCTGGTGGGAGCCATAGTGGAAGATGCTACTGGATCTGATGTGGGCAGATCCACAGAACATAGAGGGCAAATTAGTGGAGAATCTGATAACATTATGTTTGAGAACGACAATGGAGAACCTGGTCAGGTGCCGTATGTAAGTAGTGAAAAAGATTGTGAAGTGCAAATTGCAGATATGACTACTTTGGACGCAGAAGTGCATGACAGTGTAAAAGATGAACTTCAGTGTGGTACCCACCAAACATCAGCTTCCGATTGCAGCTACCACTTGCCAAGCTCTTCAAATGTCGGGTCTAGTAGAAGTCATTCAACTCTTGGGGATTCCAATTTCGTGGAAAACTATTTTAAGAGCTCAAGGCTGCACTTCATAGGAACATGGAGAAATCGGTATCGTAAACGTTTTCCGAGTTCCTTTAAAGGGTTTAAGAGCACAGAGCCTAATCTTAGTGCTTCGACGAGTTTTCAGAAGGCTGCCATTATACATATTGACATGGACTGTTTTTTCGTGTCAGTGGTCATCAGGAAACGTCCTGAGTTTAAGGATAGGCCTGTAGCTGTATGCCATTCTGATAATCCAAAGGGAACTGCTGAAATTTCATCTGCAAACTACCCTGCTCGAAATTATGGAGTGAAGGCTGGGATGTTTGTTAGAGATGCCAAGGCTATTTGTCCAAACCTTGTCATTATTCCATATGATTTTGAAGCTTATGAGGAGGTAGCTGATCAGTTCTATGACATCTTGCATAAGCACTGCAATAAAGTACAGGCAGTAAGCTGTGATGAAGCATTTTTAGATGTCACAGATGTGGAAGGGGTAGATCCTGAGGTGTTAGCTTCAATTGTAAGAAAAGAGATCTTTGAGACAACTGGATGCTCTGCAAGTGCTGGCTTAGCCATAAATATGCTTATGGCTCGCCTTGCCACTAAAACTGCTAAGCCGGATGGTCAATGCTATATTCCTACTGAAAAGCTTGTAATATGGATTATGGACAAGTCATGGAATGCTCTTTGCTGTACACACTTACATTGTTTTTTAGTACATCAGGTGGATGAGTATTTACATCAACTTCCTATCAAGGAACTTCCAGGAATAGGACACACTTTAGAGCAGAAGTTGAAGAAACAAAATGTTCAGACGTGTGGACAATTGCGTATGATTTCAAAGGACTCTCTTCAAAAGAACTTTGGGATGAAAACTGGGGTGATGTTGTGGAATCATAGTAGGGGCATTGATAACCGGCTAGTTGGGGTGATTCAGGATAGCAAGTCTATTGGTGCTGAAGTGAATTGGGGCGTGAGGTTCAAGGATTTGAAAGATAGTCAACACTTCCTCTCAACTCTGTGCAAAGAGGTGTCTTTACGCTTGCAAGGATGTGGGGTGCTGGGCCGTACTTTTACCCTTAAGATTAAAAAAAGATGTAAAGATGCAGGGGAGCCAGTGAAGTATATGGGCTGCGGAGAATGTGAAAACTTGAGCCACTCTGTAACGGTTCCAGCTGCTACTGATGATGTGGAAGTTCTTCAAAGAATAGTGAATCAGCTCTTTGGGTCTTTCTCTATAGATGTTAAGGAGATCCGTGGTATTGGCTTGCAAGTTTCCAAGCTTGAGAGCACAGACACTCCAAAGCAAGGATTTGGCACAAAATCTTTAAAGTCGTGGCTCACATCAGCCTCAGGGAGTACCGAAAAGAAATCTAATTTTCATTCTATATCTAGTGTGAAGGTGAATGTAGATTGTGAGGATCGGAGAAGTGGTGGAACTTCAGGCCTGGTTGGCAACGATTCACATGGTATTCAAACTCCAGTGCTCAATAGTCTGTCTAGTGGTGAACCTTCTCTGGACCAGGTTTCTGAGCCACCACCTTTATGTCATCTTGATTTGGGAGTTATTGAGAGTCTTCCTCCAGAATTATTTACGGAACTAAATGGAATCTATGGTGGGAAGTTAGTTGATTATGTTGCTAAAAATAAACGAGAAAATTCCAGTGCTACTGTACCACATGAACAAGTACACGGTGCAAGGATTGGGGTTGAGAGACCACTCGTTAATGATGTGGTCCCCAAGAACAAAGCATCAGTAGAAATCAGGCATACAATAGTAGAAAAAGAAGCAATTCCTTCTGCTGTGGTGGGAGGGAACCATCATATGGAAGTTTCTACATCAGGTCTTGGAAACACTGATATAATGCCGTCATCTTTAAGTCAAATAGATACCTCAGTGTTGCAACAGTTGCCTCAAGAACTGAGAGTTGACATACTCGGGCAGCTTCCTGCACACAGGAAAAATGACGTATCTTCAAGTGCTTCCTTGGGCCCTCCTGCAGAAAAGCCTCCGGAATTATTAGGTCCAAGTAACAAGGATCATTCGGGACCAAGTGATCCTGCTTTGAACCACAAACTTTGGATTGGAAGTCCTCCTGGGTGGGTTGATGAGTTCAAATCCAGCAAGTGCATGGTGTTAAATGTTTTTGCTGAGTTGTATTACAAATCAGGGTCAAGTCAAAATTTATCCACCATTCTCCGAAATACTATTTTGGAATCTCAAGATCCTCCGGATCCAAGTTCTGACAGCTGGATTGAAGCTGTATACAGCTTCTCTGAGCTTCTCAGGGAGTATATTAACTTAAAGATTGACTCAGATATTGAAGAGATCTATGTTTGTTTTCGTCTTCTTAGAAGGTTTACAATGAAATCAAAATTGTTCTTACAAGTATACAACGATGTCTTTCCTTACCTTCAGGCATCTGTCGCTGAGAGTTATGGAGGAAACTTGCACATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000731 GO:0002200 GO:0002206 GO:0002376 GO:0002377 GO:0002440 GO:0002520 GO:0002565 GO:0003674 GO:0003824 GO:0003887 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0016043 GO:0016444 GO:0016445 GO:0016740 GO:0016772 GO:0016779 GO:0017125 GO:0018130 GO:0019438 GO:0019985 GO:0031974 GO:0031981 GO:0032042 GO:0032501 GO:0032502 GO:0033554 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0035822 GO:0035861 GO:0042276 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043504 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0070013 GO:0070987 GO:0071704 GO:0071840 GO:0071897 GO:0090304 GO:0090734 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

BRCT_2 IMS IMS_C IMS_HHH LIG3_BRCT

Protein Analysis

1033

Amino Acids

113.74

Weight (kDa)

5.96

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IMS	PF00817	268 - 415	3e-44	impB/mucB/samB family
POLH-Rev1_HhH	PF21704	462 - 516	4.7e-06	DNApol eta/Rev1, HhH motif
IMS_HHH_1	PF21999	465 - 517	1.8e-20	DNA polymerase-iota, thumb domain
IMS_C	PF11799	527 - 646	4.4e-19	impB/mucB/samB family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44750 AT5G44750
fragaria_vesca	FvH4_1g23540 FvH4_2g04972
malus_domestica	MD05G1091100.v1.1 MD10G1098400.v1.1
prunus_persica	Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1 Prupe.8G136700_v2.0.a1
pyrus_communis	pycom10g08430
rosa_chinensis	RchiOBHm_Chr6g0254741
rosa_laevigata	RLG00000014893
rosa_multiflora	Rmu_sc0007716.1_g000003
rosa_roxburghii	Rroxscaffold_7G00210560
rosa_rugosa	Rorug05G0554600
rosa_samantha	Rh6AG071600 Rh6BG063800 Rh6CG063200 Rh6DG060300
rosa_wichuraiana	Rw6G006270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	548
AccB1I	GGYRCC	2 cut(s)	445, 548
AccB7I	CCANNNNNTGG	1 cut(s)	2464
AccI	GTMKAC	2 cut(s)	2904, 3030
AccIII	TCCGGA	2 cut(s)	2650, 2869
AciI	CCGC	1 cut(s)	1773
AclI	AACGTT	1 cut(s)	715
AcsI	RAATTY	4 cut(s)	94, 909, 2296, 2821
AcuI	CTGAAG	4 cut(s)	524, 1617, 2064, 3038
AfaI	GTAC	8 cut(s)	550, 1080, 1333, 1356, 1708, 1999, 2313, 2328
AfiI	CCNNNNNNNGG	5 cut(s)	260, 735, 1409, 1946, 2464
AflII	CTTAAG	1 cut(s)	1718
AflIII	ACRYGT	1 cut(s)	1454
AhdI	GACNNNNNGTC	1 cut(s)	47
AjiI	CACGTC	1 cut(s)	1455
AjnI	CCWGG	6 cut(s)	137, 436, 1402, 2085, 2160, 2734
AleI	CACNNNNGTG	1 cut(s)	1121
Alw21I	GWGCWC	4 cut(s)	671, 749, 1931, 2127
Alw26I	GTCTC	3 cut(s)	122, 1172, 2347
AlwNI	CAGNNNCTG	1 cut(s)	158
Ama87I	CYCGRG	1 cut(s)	2576
Aor13HI	TCCGGA	2 cut(s)	2650, 2869
AoxI	GGCC	4 cut(s)	863, 1702, 2083, 2629
ApaI	GGGCCC	1 cut(s)	2633
ApeKI	GCWGC	8 cut(s)	158, 281, 576, 676, 788, 1770, 1814, 2581
ApoI	RAATTY	4 cut(s)	94, 909, 2296, 2821
ArsI	GACNNNNNNTTYG	4 cut(s)	593, 625, 803, 835
Asp700I	GAANNNNTTC	3 cut(s)	622, 1836, 2430
Asp718I	GGTACC	1 cut(s)	548
AspS9I	GGNCC	7 cut(s)	1702, 2158, 2374, 2629, 2630, 2663, 2687
AsuC2I	CCSGG	1 cut(s)	254
AsuHPI	GGTGA	5 cut(s)	139, 1531, 1579, 2053, 2156
AvaI	CYCGRG	1 cut(s)	2576
AvaII	GGWCC	4 cut(s)	2158, 2374, 2663, 2687
AxyI	CCTNAGG	2 cut(s)	1140, 1990
BaeGI	GKGCMC	1 cut(s)	2633
BaeI	ACNNNNGTAYC	2 cut(s)	2520, 2553
BamHI	GGATCC	1 cut(s)	2872
BanI	GGYRCC	2 cut(s)	445, 548
BanII	GRGCYC	2 cut(s)	671, 2633
BbsI	GAAGAC	2 cut(s)	2207, 2978
Bbv12I	GWGCWC	4 cut(s)	671, 749, 1931, 2127
BbvI	GCAGC	8 cut(s)	145, 268, 588, 663, 775, 1757, 1801, 2593
BccI	CCATC	2 cut(s)	1253, 2466
BceAI	ACGGC	3 cut(s)	433, 1689, 2491
BciT130I	CCWGG	6 cut(s)	139, 438, 1404, 2087, 2162, 2736
BclI	TGATCA	1 cut(s)	1039
BcnI	CCSGG	1 cut(s)	254
BcoDI	GTCTC	3 cut(s)	122, 1172, 2347
BfaI	CTAG	4 cut(s)	612, 1559, 2031, 2139
BfmI	CTRYAG	3 cut(s)	867, 1875, 2637
BfrI	CTTAAG	1 cut(s)	1718
BglI	GCCNNNNNGGC	1 cut(s)	2091
BglII	AGATCT	2 cut(s)	1170, 2967
BisI	GCNGC	8 cut(s)	159, 282, 577, 677, 789, 1771, 1815, 2582
BlpI	GCTNAGC	2 cut(s)	1207, 1251
BlsI	GCNGC	8 cut(s)	160, 283, 578, 678, 790, 1772, 1816, 2583
Bme1390I	CCNGG	7 cut(s)	139, 254, 438, 1404, 2087, 2162, 2736
Bme18I	GGWCC	4 cut(s)	2158, 2374, 2663, 2687
BmeRI	GACNNNNNGTC	1 cut(s)	47
BmeT110I	CYCGRG	1 cut(s)	2576
BmgBI	CACGTC	1 cut(s)	1455
BmgT120I	GGNCC	7 cut(s)	1702, 2158, 2374, 2629, 2630, 2663, 2687
BmrFI	CCNGG	7 cut(s)	139, 254, 438, 1404, 2087, 2162, 2736
BmrI	ACTGGG	2 cut(s)	116, 1524
BmsI	GCATC	7 cut(s)	268, 331, 961, 1178, 1732, 2399, 3068
BmuI	ACTGGG	2 cut(s)	116, 1524
BpiI	GAAGAC	2 cut(s)	2207, 2978
BplI	GAGNNNNNCTC	2 cut(s)	2203, 2235
BpmI	CTGGAG	2 cut(s)	2103, 2205
Bpu1102I	GCTNAGC	2 cut(s)	1207, 1251
BpuEI	CTTGAG	6 cut(s)	193, 655, 1810, 1943, 2538, 2844
BpuMI	CCSGG	1 cut(s)	254
BsaI	GGTCTC	2 cut(s)	122, 2347
BsaJI	CCNNGG	4 cut(s)	975, 1894, 2625, 2735
BsaWI	WCCGGW	2 cut(s)	2650, 2869
BsaXI	ACNNNNNCTCC	6 cut(s)	318, 348, 1921, 1951, 2056, 2086
Bsc4I	CCNNNNNNNGG	5 cut(s)	260, 735, 1409, 1946, 2464
Bse118I	RCCGGY	1 cut(s)	1554
Bse1I	ACTGG	7 cut(s)	122, 352, 1189, 1519, 1754, 2120, 2301
Bse21I	CCTNAGG	2 cut(s)	1140, 1990
Bse3DI	GCAATG	2 cut(s)	218, 314
BseAI	TCCGGA	2 cut(s)	2650, 2869
BseBI	CCWGG	6 cut(s)	139, 438, 1404, 2087, 2162, 2736
BseDI	CCNNGG	4 cut(s)	975, 1894, 2625, 2735
BseGI	GGATG	6 cut(s)	963, 1193, 1264, 1372, 1512, 1694
BseLI	CCNNNNNNNGG	5 cut(s)	260, 735, 1409, 1946, 2464
BseMI	GCAATG	2 cut(s)	218, 314
BseNI	ACTGG	7 cut(s)	122, 352, 1189, 1519, 1754, 2120, 2301
BseRI	GAGGAG	1 cut(s)	1043
BseSI	GKGCMC	1 cut(s)	2633
BseXI	GCAGC	8 cut(s)	145, 268, 588, 663, 775, 1757, 1801, 2593
BseYI	CCCAGC	2 cut(s)	953, 1699
BsgI	GTGCAG	2 cut(s)	662, 2574
BshFI	GGCC	4 cut(s)	865, 1704, 2085, 2631
BshNI	GGYRCC	2 cut(s)	445, 548
BsiHKAI	GWGCWC	4 cut(s)	671, 749, 1931, 2127
BsiHKCI	CYCGRG	1 cut(s)	2576
BsiSI	CCGG	5 cut(s)	254, 1256, 1555, 2651, 2870
BslFI	GGGAC	2 cut(s)	2360, 2700
BslI	CCNNNNNNNGG	5 cut(s)	260, 735, 1409, 1946, 2464
BsmAI	GTCTC	3 cut(s)	122, 1172, 2347
BsmFI	GGGAC	2 cut(s)	2360, 2700
BsmI	GAATGC	1 cut(s)	1324
BsnI	GGCC	4 cut(s)	865, 1704, 2085, 2631
Bso31I	GGTCTC	2 cut(s)	122, 2347
BsoBI	CYCGRG	1 cut(s)	2576
Bsp120I	GGGCCC	1 cut(s)	2629
Bsp1286I	GDGCHC	5 cut(s)	671, 749, 1931, 2127, 2633
Bsp13I	TCCGGA	2 cut(s)	2650, 2869
Bsp1407I	TGTACA	1 cut(s)	1331
Bsp1720I	GCTNAGC	2 cut(s)	1207, 1251
BspACI	CCGC	1 cut(s)	1773
BspANI	GGCC	4 cut(s)	865, 1704, 2085, 2631
BspEI	TCCGGA	2 cut(s)	2650, 2869
BspMAI	CTGCAG	1 cut(s)	2641
BspQI	GCTCTTC	1 cut(s)	601
BspT107I	GGYRCC	2 cut(s)	445, 548
BspTI	CTTAAG	1 cut(s)	1718
BspTNI	GGTCTC	2 cut(s)	122, 2347
BsrDI	GCAATG	2 cut(s)	218, 314
BsrFI	RCCGGY	1 cut(s)	1554
BsrGI	TGTACA	1 cut(s)	1331
BsrI	ACTGG	7 cut(s)	122, 352, 1189, 1519, 1754, 2120, 2301
BssAI	RCCGGY	1 cut(s)	1554
BssECI	CCNNGG	4 cut(s)	975, 1894, 2625, 2735
BssNAI	GTATAC	2 cut(s)	2905, 3031
BssT1I	CCWWGG	2 cut(s)	975, 2625
Bst1107I	GTATAC	2 cut(s)	2905, 3031
Bst2UI	CCWGG	6 cut(s)	139, 438, 1404, 2087, 2162, 2736
Bst4CI	ACNGT	6 cut(s)	524, 815, 1807, 2311, 2333, 2547
Bst6I	CTCTTC	3 cut(s)	601, 1494, 2958
BstAFI	CTTAAG	1 cut(s)	1718
BstAPI	GCANNNNNTGC	1 cut(s)	2548
BstAUI	TGTACA	1 cut(s)	1331
BstC8I	GCNNGC	5 cut(s)	208, 1204, 1231, 1682, 1907
BstDSI	CCRYGG	1 cut(s)	1894
BstF5I	GGATG	6 cut(s)	963, 1193, 1264, 1372, 1512, 1694
BstMAI	GTCTC	3 cut(s)	122, 1172, 2347
BstMWI	GCNNNNNNNGC	5 cut(s)	1208, 1235, 2091, 2548, 3065
BstNI	CCWGG	6 cut(s)	139, 438, 1404, 2087, 2162, 2736
BstSCI	CCNGG	7 cut(s)	137, 252, 436, 1402, 2085, 2160, 2734
BstSFI	CTRYAG	3 cut(s)	867, 1875, 2637
BstSLI	GKGCMC	1 cut(s)	2633
BstV1I	GCAGC	8 cut(s)	145, 268, 588, 663, 775, 1757, 1801, 2593
BstV2I	GAAGAC	2 cut(s)	2207, 2978
BstX2I	RGATCY	8 cut(s)	350, 365, 1135, 1170, 1890, 2863, 2872, 2967
BstXI	CCANNNNNNTGG	1 cut(s)	649
BstYI	RGATCY	8 cut(s)	350, 365, 1135, 1170, 1890, 2863, 2872, 2967
BstZ17I	GTATAC	2 cut(s)	2905, 3031
Bsu36I	CCTNAGG	2 cut(s)	1140, 1990
BsuRI	GGCC	4 cut(s)	865, 1704, 2085, 2631
BtgI	CCRYGG	1 cut(s)	1894
BtrI	CACGTC	1 cut(s)	1455
BtsCI	GGATG	6 cut(s)	963, 1193, 1264, 1372, 1512, 1694
BtsI	GCAGTG	1 cut(s)	1066
Cac8I	GCNNGC	5 cut(s)	208, 1204, 1231, 1682, 1907
CaiI	CAGNNNCTG	1 cut(s)	158
Cfr10I	RCCGGY	1 cut(s)	1554
Cfr13I	GGNCC	7 cut(s)	1702, 2158, 2374, 2629, 2630, 2663, 2687
CseI	GACGC	1 cut(s)	515
CsiI	ACCWGGT	2 cut(s)	436, 2160
Csp6I	GTAC	8 cut(s)	549, 1079, 1332, 1355, 1707, 1998, 2312, 2327
CspCI	CAANNNNNGTGG	2 cut(s)	2699, 2734
CviAII	CATG	7 cut(s)	518, 693, 808, 1314, 2105, 2318, 2770
CviQI	GTAC	8 cut(s)	549, 1079, 1332, 1355, 1707, 1998, 2312, 2327
DraI	TTTAAA	2 cut(s)	733, 1968
DriI	GACNNNNNGTC	1 cut(s)	47
Eam1104I	CTCTTC	3 cut(s)	601, 1494, 2958
Eam1105I	GACNNNNNGTC	1 cut(s)	47
EarI	CTCTTC	3 cut(s)	601, 1494, 2958
Ecl136II	GAGCTC	1 cut(s)	669
Eco130I	CCWWGG	2 cut(s)	975, 2625
Eco147I	AGGCCT	2 cut(s)	865, 2085
Eco24I	GRGCYC	2 cut(s)	671, 2633
Eco31I	GGTCTC	2 cut(s)	122, 2347
Eco47I	GGWCC	4 cut(s)	2158, 2374, 2663, 2687
Eco53kI	GAGCTC	1 cut(s)	669
Eco57I	CTGAAG	4 cut(s)	524, 1617, 2064, 3038
Eco81I	CCTNAGG	2 cut(s)	1140, 1990
Eco88I	CYCGRG	1 cut(s)	2576
EcoICRI	GAGCTC	1 cut(s)	669
EcoO109I	RGGNCCY	1 cut(s)	2630
EcoRII	CCWGG	6 cut(s)	137, 436, 1402, 2085, 2160, 2734
EcoT14I	CCWWGG	2 cut(s)	975, 2625
EcoT38I	GRGCYC	2 cut(s)	671, 2633
ErhI	CCWWGG	2 cut(s)	975, 2625
FaeI	CATG	7 cut(s)	521, 696, 811, 1317, 2108, 2321, 2773
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	2 cut(s)	2360, 2700
FatI	CATG	7 cut(s)	517, 692, 807, 1313, 2104, 2317, 2769
FauNDI	CATATG	3 cut(s)	298, 1009, 2463
FbaI	TGATCA	1 cut(s)	1039
FblI	GTMKAC	2 cut(s)	2904, 3030
Fnu4HI	GCNGC	8 cut(s)	159, 282, 577, 677, 789, 1771, 1815, 2582
FokI	GGATG	6 cut(s)	970, 1200, 1271, 1379, 1519, 1701
FriOI	GRGCYC	2 cut(s)	671, 2633
Fsp4HI	GCNGC	8 cut(s)	159, 282, 577, 677, 789, 1771, 1815, 2582
FspBI	CTAG	4 cut(s)	612, 1559, 2031, 2139
GluI	GCNGC	8 cut(s)	159, 282, 577, 677, 789, 1771, 1815, 2582
GsaI	CCCAGC	2 cut(s)	957, 1703
GsuI	CTGGAG	2 cut(s)	2103, 2205
HaeIII	GGCC	4 cut(s)	865, 1704, 2085, 2631
HapII	CCGG	5 cut(s)	254, 1256, 1555, 2651, 2870
HgaI	GACGC	1 cut(s)	515
Hin1II	CATG	7 cut(s)	521, 696, 811, 1317, 2108, 2321, 2773
HincII	GTYRAC	2 cut(s)	1640, 2569
HindII	GTYRAC	2 cut(s)	1640, 2569
HindIII	AAGCTT	3 cut(s)	1020, 1286, 1919
HpaII	CCGG	5 cut(s)	254, 1256, 1555, 2651, 2870
HphI	GGTGA	5 cut(s)	139, 1531, 1579, 2053, 2156
Hpy99I	CGWCG	1 cut(s)	775
HpyAV	CCTTC	9 cut(s)	241, 778, 943, 1121, 2032, 2160, 2445, 2988, 3062
HpyCH4III	ACNGT	6 cut(s)	524, 815, 1807, 2311, 2333, 2547
HpyCH4IV	ACGT	4 cut(s)	715, 844, 1454, 2607
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1208, 1235, 2091, 2548, 3065
HpySE526I	ACGT	4 cut(s)	715, 844, 1454, 2607
Hsp92II	CATG	7 cut(s)	521, 696, 811, 1317, 2108, 2321, 2773
Kpn2I	TCCGGA	2 cut(s)	2650, 2869
KpnI	GGTACC	1 cut(s)	552
Ksp22I	TGATCA	1 cut(s)	1039
LguI	GCTCTTC	1 cut(s)	601
LmnI	GCTCC	2 cut(s)	326, 1750
Lsp1109I	GCAGC	8 cut(s)	145, 268, 588, 663, 775, 1757, 1801, 2593
LweI	GCATC	7 cut(s)	268, 331, 961, 1178, 1732, 2399, 3068
MabI	ACCWGGT	2 cut(s)	436, 2160
MaeI	CTAG	4 cut(s)	612, 1559, 2031, 2139
MaeII	ACGT	4 cut(s)	715, 844, 1454, 2607
MaeIII	GTNAC	6 cut(s)	49, 292, 310, 1114, 1801, 2669
MboII	GAAGA	9 cut(s)	350, 588, 1447, 1481, 1829, 2207, 2604, 2975, 2978
MfeI	CAATTG	2 cut(s)	1155, 1463
MflI	RGATCY	8 cut(s)	350, 365, 1135, 1170, 1890, 2863, 2872, 2967
MhlI	GDGCHC	5 cut(s)	671, 749, 1931, 2127, 2633
MlyI	GAGTC	4 cut(s)	251, 1478, 2221, 2945
MroI	TCCGGA	2 cut(s)	2650, 2869
MroXI	GAANNNNTTC	3 cut(s)	622, 1836, 2430
MslI	CAYNNNNRTG	4 cut(s)	522, 1121, 1217, 2182
MspA1I	CMGCKG	2 cut(s)	1814, 2889
MspCI	CTTAAG	1 cut(s)	1718
MspI	CCGG	5 cut(s)	254, 1256, 1555, 2651, 2870
MspR9I	CCNGG	7 cut(s)	139, 254, 438, 1404, 2087, 2162, 2736
MunI	CAATTG	2 cut(s)	1155, 1463
Mva1269I	GAATGC	1 cut(s)	1324
MvaI	CCWGG	6 cut(s)	139, 438, 1404, 2087, 2162, 2736
MwoI	GCNNNNNNNGC	5 cut(s)	1208, 1235, 2091, 2548, 3065
NciI	CCSGG	1 cut(s)	254
NdeI	CATATG	3 cut(s)	298, 1009, 2463
NlaIII	CATG	7 cut(s)	521, 696, 811, 1317, 2108, 2321, 2773
NmuCI	GTSAC	2 cut(s)	49, 1114
OliI	CACNNNNGTG	1 cut(s)	1121
PceI	AGGCCT	2 cut(s)	865, 2085
PciSI	GCTCTTC	1 cut(s)	601
PctI	GAATGC	1 cut(s)	1324
PdmI	GAANNNNTTC	3 cut(s)	622, 1836, 2430
PfeI	GAWTC	9 cut(s)	149, 398, 638, 1531, 1570, 1852, 2099, 2247, 2855
PflMI	CCANNNNNTGG	1 cut(s)	2464
PfoI	TCCNGGA	3 cut(s)	137, 252, 1402
PkrI	GCNGC	8 cut(s)	160, 283, 578, 678, 790, 1772, 1816, 2583
PleI	GAGTC	4 cut(s)	251, 1478, 2220, 2945
PpsI	GAGTC	4 cut(s)	251, 1478, 2220, 2945
Psp124BI	GAGCTC	1 cut(s)	671
Psp1406I	AACGTT	1 cut(s)	715
Psp6I	CCWGG	6 cut(s)	137, 436, 1402, 2085, 2160, 2734
PspFI	CCCAGC	2 cut(s)	953, 1699
PspGI	CCWGG	6 cut(s)	137, 436, 1402, 2085, 2160, 2734
PspOMI	GGGCCC	1 cut(s)	2629
PspPI	GGNCC	7 cut(s)	1702, 2158, 2374, 2629, 2630, 2663, 2687
PstI	CTGCAG	1 cut(s)	2641
PstNI	CAGNNNCTG	1 cut(s)	158
PsuI	RGATCY	8 cut(s)	350, 365, 1135, 1170, 1890, 2863, 2872, 2967
PvuII	CAGCTG	2 cut(s)	1814, 2889
RsaI	GTAC	8 cut(s)	550, 1080, 1333, 1356, 1708, 1999, 2313, 2328
RsaNI	GTAC	8 cut(s)	549, 1079, 1332, 1355, 1707, 1998, 2312, 2327
RseI	CAYNNNNRTG	4 cut(s)	522, 1121, 1217, 2182
SacI	GAGCTC	1 cut(s)	671
SapI	GCTCTTC	1 cut(s)	601
SatI	GCNGC	8 cut(s)	159, 282, 577, 677, 789, 1771, 1815, 2582
Sau96I	GGNCC	7 cut(s)	1702, 2158, 2374, 2629, 2630, 2663, 2687
SchI	GAGTC	4 cut(s)	251, 1478, 2221, 2945
ScrFI	CCNGG	7 cut(s)	139, 254, 438, 1404, 2087, 2162, 2736
SduI	GDGCHC	5 cut(s)	671, 749, 1931, 2127, 2633
SexAI	ACCWGGT	2 cut(s)	436, 2160
SfaNI	GCATC	7 cut(s)	268, 331, 961, 1178, 1732, 2399, 3068
SfcI	CTRYAG	3 cut(s)	867, 1875, 2637
SinI	GGWCC	4 cut(s)	2158, 2374, 2663, 2687
SmiMI	CAYNNNNRTG	4 cut(s)	522, 1121, 1217, 2182
SmlI	CTYRAG	7 cut(s)	172, 670, 1718, 1789, 1922, 2553, 2859
SmoI	CTYRAG	7 cut(s)	172, 670, 1718, 1789, 1922, 2553, 2859
SseBI	AGGCCT	2 cut(s)	865, 2085
SsiI	CCGC	1 cut(s)	1773
SspMI	CTAG	4 cut(s)	612, 1559, 2031, 2139
SstI	GAGCTC	1 cut(s)	671
StuI	AGGCCT	2 cut(s)	865, 2085
StyD4I	CCNGG	7 cut(s)	137, 252, 436, 1402, 2085, 2160, 2734
StyI	CCWWGG	2 cut(s)	975, 2625
TaaI	ACNGT	6 cut(s)	524, 815, 1807, 2311, 2333, 2547
TaiI	ACGT	4 cut(s)	718, 847, 1457, 2610
TaqI	TCGA	2 cut(s)	770, 934
TatI	WGTACW	4 cut(s)	1078, 1331, 1354, 2326
TfiI	GAWTC	9 cut(s)	149, 398, 638, 1531, 1570, 1852, 2099, 2247, 2855
TseFI	GTSAC	2 cut(s)	49, 1114
TseI	GCWGC	8 cut(s)	158, 281, 576, 676, 788, 1770, 1814, 2581
Tsp45I	GTSAC	2 cut(s)	49, 1114
TspDTI	ATGAA	9 cut(s)	315, 549, 673, 903, 1113, 1523, 2009, 2334, 3020
TspGWI	ACGGA	2 cut(s)	1883, 2249
Van91I	CCANNNNNTGG	1 cut(s)	2464
Vha464I	CTTAAG	1 cut(s)	1718
VpaK11BI	GGWCC	4 cut(s)	2158, 2374, 2663, 2687
XapI	RAATTY	4 cut(s)	94, 909, 2296, 2821
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2767
XmiI	GTMKAC	2 cut(s)	2904, 3030
XmnI	GAANNNNTTC	3 cut(s)	622, 1836, 2430
XspI	CTAG	4 cut(s)	612, 1559, 2031, 2139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.