pycom10g15510

Protein BREAST CANCER SUSCEPTIBILITY 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0007909
Physical Location & Seq
Reverse (-)
18751832 .. 18753600
1769 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 840 bp
ATGTCGGTGAGGCCGAACAGCAGTTTTCTATGGAACTCTCTGAGTTTCCGAACCTTCGTTTCAATGGCGGACGCAAACCCTAACCCTAAGTGCAGCGACAGTAGCAGTACCAGGTCGACGATGAACCCATGGGTTCTTCATTTTCAGAAACTGGGCCTCGAGCTCAAGTGCCCGCTCTGGTCCTGCATACCCAGTTCGAGTTGCCCTGTTTGTAAAGCTGAGGTTGCGGATCGAGATCTCAGGCCTGTGCCATTCATGGAAAACATAGTAGCCATCTATAAAAGCTTGGATGCGTCTTTCTGCGCCAATTTGTTGCAGCCCGTTTCTTCTGATGTTAGAACCATTTTGGAACAAAACCCCATTTCGCCTTTTATCAGTTTTGCTGGCACAATTGCTAAAGAACCATTTGACAATGACCAGGGCGGTAATTCAAACAGTGGACAATCCGTCTATTCGTCGAGTGCTCATGAACGAGTTTGGGCTCCTTGTAGTCTGAATCGTTCTGTTGCTGATGGAATTGGCAAGAATGGCAAATTAGAAAACTGTAGCATGCCAATAGATGCTAATGGCAAGGTATTAGATTTTGCTAGAAGCGGAATGGGAAATACCATTTTACAACTACCAAGTTCTCAAATAAGAGCTGGTGGACTTGAAGAGTGCATGACTGTAGAAAGAGGCATGAATCACGCAGCACAGTCATTGCCCAACAGTCCTCCTTCATTTGGTGATGCCAAATGTTCAGATAATGATAGCTGTGGTCGGCGCTGTGAGCAAATTTCAGAAAATTCTTTGGTCAGGAGATCGATCTCTGTTCAAGCAACATTGATGATAGTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0000152 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009653 GO:0009888 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009934 GO:0009987 GO:0010015 GO:0010073 GO:0010074 GO:0010078 GO:0010212 GO:0010332 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010565 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0018022 GO:0018023 GO:0018193 GO:0018205 GO:0019216 GO:0019217 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019827 GO:0022603 GO:0022607 GO:0022622 GO:0031056 GO:0031057 GO:0031058 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031400 GO:0031401 GO:0031436 GO:0032259 GO:0032268 GO:0032269 GO:0032270 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034622 GO:0034641 GO:0034968 GO:0035065 GO:0035066 GO:0035067 GO:0036211 GO:0042127 GO:0042304 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045717 GO:0045787 GO:0045833 GO:0045892 GO:0045893 GO:0045922 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0046890 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051055 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051254 GO:0051276 GO:0051568 GO:0051716 GO:0051726 GO:0060255 GO:0062012 GO:0062014 GO:0065003 GO:0065004 GO:0065007 GO:0070531 GO:0070647 GO:0071156 GO:0071158 GO:0071214 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071824 GO:0071840 GO:0071944 GO:0080090 GO:0080182 GO:0090068 GO:0090304 GO:0097159 GO:0098727 GO:0099402 GO:0104004 GO:0140096 GO:1901360 GO:1901363 GO:1901564 GO:1901983 GO:1901984 GO:1901985 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:1905268 GO:1905269 GO:1905392 GO:1990234 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2000758 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03440 ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map03440 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
BRCT BRCT_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-HC5HC2H zf-RING_UBOX

Protein Analysis

280

Amino Acids

30.24

Weight (kDa)

5.98

Isoelectric Point (pI)

61.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 175
AccI GTMKAC 1 cut(s) 116
AciI CCGC 5 cut(s) 68, 173, 227, 423, 594
AclWI GGATC 1 cut(s) 237
AcsI RAATTY 2 cut(s) 774, 784
AfaI GTAC 1 cut(s) 109
AfiI CCNNNNNNNGG 1 cut(s) 722
AgsI TTSAA 4 cut(s) 63, 432, 653, 815
AhdI GACNNNNNGTC 1 cut(s) 446
AjnI CCWGG 2 cut(s) 110, 417
AluBI AGCT 5 cut(s) 163, 218, 285, 641, 753
AluI AGCT 5 cut(s) 163, 218, 285, 641, 753
Alw21I GWGCWC 2 cut(s) 165, 466
AlwI GGATC 1 cut(s) 237
AlwNI CAGNNNCTG 1 cut(s) 151
Ama87I CYCGRG 1 cut(s) 158
AoxI GGCC 3 cut(s) 11, 154, 242
ApeKI GCWGC 3 cut(s) 93, 316, 689
ApoI RAATTY 2 cut(s) 774, 784
AspLEI GCGC 2 cut(s) 305, 765
AspS9I GGNCC 2 cut(s) 154, 180
AsuHPI GGTGA 2 cut(s) 19, 737
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 173
BanII GRGCYC 2 cut(s) 165, 484
Bbv12I GWGCWC 2 cut(s) 165, 466
BbvCI CCTCAGC 1 cut(s) 219
BbvI GCAGC 3 cut(s) 105, 328, 701
BccI CCATC 2 cut(s) 281, 506
BciT130I CCWGG 2 cut(s) 112, 419
BfaI CTAG 1 cut(s) 588
BfmI CTRYAG 2 cut(s) 544, 666
BfoI RGCGCY 1 cut(s) 766
BglII AGATCT 1 cut(s) 235
BisI GCNGC 3 cut(s) 94, 317, 690
BlsI GCNGC 3 cut(s) 95, 318, 691
Bme1390I CCNGG 2 cut(s) 112, 419
Bme18I GGWCC 1 cut(s) 180
BmeRI GACNNNNNGTC 1 cut(s) 446
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 2 cut(s) 154, 180
BmiI GGNNCC 1 cut(s) 483
BmrFI CCNGG 2 cut(s) 112, 419
BmrI ACTGGG 2 cut(s) 161, 186
BmsI GCATC 3 cut(s) 280, 550, 718
BmuI ACTGGG 2 cut(s) 161, 186
Bpu10I CCTNAGC 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 149
Bsa29I ATCGAT 1 cut(s) 803
BsaBI GATNNNNATC 1 cut(s) 234
BsaJI CCNNGG 2 cut(s) 128, 418
Bsc4I CCNNNNNNNGG 1 cut(s) 722
Bse1I ACTGG 2 cut(s) 156, 192
Bse3DI GCAATG 1 cut(s) 698
Bse8I GATNNNNATC 1 cut(s) 234
BseBI CCWGG 2 cut(s) 112, 419
BseCI ATCGAT 1 cut(s) 803
BseDI CCNNGG 2 cut(s) 128, 418
BseGI GGATG 1 cut(s) 295
BseJI GATNNNNATC 1 cut(s) 234
BseLI CCNNNNNNNGG 1 cut(s) 722
BseMI GCAATG 1 cut(s) 698
BseMII CTCAG 3 cut(s) 32, 210, 253
BseNI ACTGG 2 cut(s) 156, 192
BseSI GKGCMC 1 cut(s) 173
BseXI GCAGC 3 cut(s) 105, 328, 701
BsgI GTGCAG 1 cut(s) 112
BshFI GGCC 3 cut(s) 13, 156, 244
BshVI ATCGAT 1 cut(s) 803
BsiHKAI GWGCWC 2 cut(s) 165, 466
BsiHKCI CYCGRG 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 722
BsnI GGCC 3 cut(s) 13, 156, 244
BsoBI CYCGRG 1 cut(s) 158
Bsp1286I GDGCHC 4 cut(s) 165, 173, 466, 484
Bsp143I GATC 4 cut(s) 229, 235, 800, 804
Bsp19I CCATGG 1 cut(s) 128
BspACI CCGC 5 cut(s) 68, 173, 227, 423, 594
BspANI GGCC 3 cut(s) 13, 156, 244
BspCNI CTCAG 3 cut(s) 33, 211, 252
BspDI ATCGAT 1 cut(s) 803
BspHI TCATGA 1 cut(s) 466
BspLI GGNNCC 1 cut(s) 483
BspPI GGATC 1 cut(s) 237
BsrBI CCGCTC 1 cut(s) 175
BsrDI GCAATG 1 cut(s) 698
BsrI ACTGG 2 cut(s) 156, 192
BssECI CCNNGG 2 cut(s) 128, 418
BssMI GATC 4 cut(s) 229, 235, 800, 804
BssT1I CCWWGG 1 cut(s) 128
Bst2UI CCWGG 2 cut(s) 112, 419
Bst4CI ACNGT 6 cut(s) 101, 437, 545, 667, 696, 710
Bst6I CTCTTC 1 cut(s) 648
BstC8I GCNNGC 3 cut(s) 173, 385, 551
BstDEI CTNAG 4 cut(s) 41, 87, 219, 239
BstDSI CCRYGG 1 cut(s) 128
BstF5I GGATG 1 cut(s) 295
BstH2I RGCGCY 1 cut(s) 766
BstHHI GCGC 2 cut(s) 305, 765
BstKTI GATC 4 cut(s) 232, 238, 803, 807
BstMBI GATC 4 cut(s) 229, 235, 800, 804
BstMWI GCNNNNNNNGC 4 cut(s) 102, 224, 528, 769
BstNI CCWGG 2 cut(s) 112, 419
BstNSI RCATGY 1 cut(s) 553
BstSCI CCNGG 2 cut(s) 110, 417
BstSFI CTRYAG 2 cut(s) 544, 666
BstSLI GKGCMC 1 cut(s) 173
BstV1I GCAGC 3 cut(s) 105, 328, 701
BstX2I RGATCY 1 cut(s) 235
BstYI RGATCY 1 cut(s) 235
Bsu15I ATCGAT 1 cut(s) 803
BsuRI GGCC 3 cut(s) 13, 156, 244
BsuTUI ATCGAT 1 cut(s) 803
BtgI CCRYGG 1 cut(s) 128
BtsCI GGATG 1 cut(s) 295
BtsIMutI CAGTG 1 cut(s) 442
Cac8I GCNNGC 3 cut(s) 173, 385, 551
CaiI CAGNNNCTG 1 cut(s) 151
CciI TCATGA 1 cut(s) 466
CfoI GCGC 2 cut(s) 305, 765
Cfr13I GGNCC 2 cut(s) 154, 180
ClaI ATCGAT 1 cut(s) 803
CseI GACGC 2 cut(s) 80, 282
CsiI ACCWGGT 1 cut(s) 110
Csp6I GTAC 1 cut(s) 108
CviAII CATG 6 cut(s) 129, 256, 467, 550, 661, 679
CviQI GTAC 1 cut(s) 108
DdeI CTNAG 4 cut(s) 41, 87, 219, 239
DpnI GATC 4 cut(s) 231, 237, 802, 806
DpnII GATC 4 cut(s) 229, 235, 800, 804
DriI GACNNNNNGTC 1 cut(s) 446
Eam1104I CTCTTC 1 cut(s) 648
Eam1105I GACNNNNNGTC 1 cut(s) 446
EarI CTCTTC 1 cut(s) 648
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 163
Eco130I CCWWGG 1 cut(s) 128
Eco147I AGGCCT 1 cut(s) 244
Eco24I GRGCYC 2 cut(s) 165, 484
Eco47I GGWCC 1 cut(s) 180
Eco53kI GAGCTC 1 cut(s) 163
Eco88I CYCGRG 1 cut(s) 158
EcoICRI GAGCTC 1 cut(s) 163
EcoRII CCWGG 2 cut(s) 110, 417
EcoT14I CCWWGG 1 cut(s) 128
EcoT38I GRGCYC 2 cut(s) 165, 484
ErhI CCWWGG 1 cut(s) 128
FaeI CATG 6 cut(s) 132, 259, 470, 553, 664, 682
FatI CATG 6 cut(s) 128, 255, 466, 549, 660, 678
FauI CCCGC 1 cut(s) 180
FblI GTMKAC 1 cut(s) 116
Fnu4HI GCNGC 3 cut(s) 94, 317, 690
FokI GGATG 1 cut(s) 302
FriOI GRGCYC 2 cut(s) 165, 484
Fsp4HI GCNGC 3 cut(s) 94, 317, 690
FspBI CTAG 1 cut(s) 588
GlaI GCGC 2 cut(s) 304, 764
GluI GCNGC 3 cut(s) 94, 317, 690
HaeII RGCGCY 1 cut(s) 766
HaeIII GGCC 3 cut(s) 13, 156, 244
HgaI GACGC 2 cut(s) 80, 282
HhaI GCGC 2 cut(s) 305, 765
Hin1II CATG 6 cut(s) 132, 259, 470, 553, 664, 682
Hin6I GCGC 2 cut(s) 303, 763
HinP1I GCGC 2 cut(s) 303, 763
HincII GTYRAC 1 cut(s) 117
HindII GTYRAC 1 cut(s) 117
HindIII AAGCTT 1 cut(s) 283
HinfI GANTC 2 cut(s) 496, 682
HphI GGTGA 2 cut(s) 19, 737
Hpy166II GTNNAC 3 cut(s) 117, 440, 647
Hpy188I TCNGA 7 cut(s) 42, 50, 147, 331, 495, 742, 781
Hpy188III TCNNGA 3 cut(s) 233, 467, 796
Hpy8I GTNNAC 3 cut(s) 117, 440, 647
Hpy99I CGWCG 2 cut(s) 121, 460
HpyAV CCTTC 2 cut(s) 64, 726
HpyCH4III ACNGT 6 cut(s) 101, 437, 545, 667, 696, 710
HpyCH4V TGCA 4 cut(s) 93, 186, 316, 660
HpyF10VI GCNNNNNNNGC 4 cut(s) 102, 224, 528, 769
HpyF3I CTNAG 4 cut(s) 41, 87, 219, 239
Hsp92II CATG 6 cut(s) 132, 259, 470, 553, 664, 682
HspAI GCGC 2 cut(s) 303, 763
Kzo9I GATC 4 cut(s) 229, 235, 800, 804
LmnI GCTCC 1 cut(s) 487
Lsp1109I GCAGC 3 cut(s) 105, 328, 701
LweI GCATC 3 cut(s) 280, 550, 718
MabI ACCWGGT 1 cut(s) 110
MaeI CTAG 1 cut(s) 588
MalI GATC 4 cut(s) 231, 237, 802, 806
MbiI CCGCTC 1 cut(s) 175
MboI GATC 4 cut(s) 229, 235, 800, 804
MboII GAAGA 3 cut(s) 128, 318, 665
MfeI CAATTG 1 cut(s) 390
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 4 cut(s) 165, 173, 466, 484
MluCI AATT 7 cut(s) 307, 390, 427, 516, 533, 774, 784
MnlI CCTC 5 cut(s) 3, 167, 214, 668, 723
MspR9I CCNGG 2 cut(s) 112, 419
MunI CAATTG 1 cut(s) 390
MvaI CCWGG 2 cut(s) 112, 419
MwoI GCNNNNNNNGC 4 cut(s) 102, 224, 528, 769
NcoI CCATGG 1 cut(s) 128
NdeII GATC 4 cut(s) 229, 235, 800, 804
NlaIII CATG 6 cut(s) 132, 259, 470, 553, 664, 682
NlaIV GGNNCC 1 cut(s) 483
NspI RCATGY 1 cut(s) 553
PaeI GCATGC 1 cut(s) 553
PaeR7I CTCGAG 1 cut(s) 158
PagI TCATGA 1 cut(s) 466
PceI AGGCCT 1 cut(s) 244
PcsI WCGNNNNNNNCGW 1 cut(s) 11
PfeI GAWTC 2 cut(s) 496, 682
PkrI GCNGC 3 cut(s) 95, 318, 691
Psp124BI GAGCTC 1 cut(s) 165
Psp6I CCWGG 2 cut(s) 110, 417
PspGI CCWGG 2 cut(s) 110, 417
PspN4I GGNNCC 1 cut(s) 483
PspPI GGNCC 2 cut(s) 154, 180
PspXI VCTCGAGB 1 cut(s) 158
PstNI CAGNNNCTG 1 cut(s) 151
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 1 cut(s) 109
RsaNI GTAC 1 cut(s) 108
SacI GAGCTC 1 cut(s) 165
SalI GTCGAC 1 cut(s) 115
SatI GCNGC 3 cut(s) 94, 317, 690
Sau3AI GATC 4 cut(s) 229, 235, 800, 804
Sau96I GGNCC 2 cut(s) 154, 180
ScrFI CCNGG 2 cut(s) 112, 419
SduI GDGCHC 4 cut(s) 165, 173, 466, 484
SetI ASST 9 cut(s) 56, 116, 165, 220, 225, 287, 576, 643, 755
SexAI ACCWGGT 1 cut(s) 110
SfaNI GCATC 3 cut(s) 280, 550, 718
SfcI CTRYAG 2 cut(s) 544, 666
Sfr274I CTCGAG 1 cut(s) 158
SinI GGWCC 1 cut(s) 180
SlaI CTCGAG 1 cut(s) 158
SmlI CTYRAG 2 cut(s) 158, 164
SmoI CTYRAG 2 cut(s) 158, 164
SphI GCATGC 1 cut(s) 553
Sse9I AATT 7 cut(s) 307, 390, 427, 516, 533, 774, 784
SseBI AGGCCT 1 cut(s) 244
SsiI CCGC 5 cut(s) 68, 173, 227, 423, 594
SspMI CTAG 1 cut(s) 588
SstI GAGCTC 1 cut(s) 165
StuI AGGCCT 1 cut(s) 244
StyD4I CCNGG 2 cut(s) 110, 417
StyI CCWWGG 1 cut(s) 128
TaaI ACNGT 6 cut(s) 101, 437, 545, 667, 696, 710
TaqI TCGA 6 cut(s) 116, 159, 197, 232, 458, 803
TasI AATT 7 cut(s) 307, 390, 427, 516, 533, 774, 784
TfiI GAWTC 2 cut(s) 496, 682
TscAI CASTG 1 cut(s) 442
TseI GCWGC 3 cut(s) 93, 316, 689
TspDTI ATGAA 6 cut(s) 128, 137, 244, 483, 695, 708
TspGWI ACGGA 1 cut(s) 436
TspRI CASTG 1 cut(s) 442
VpaK11BI GGWCC 1 cut(s) 180
XapI RAATTY 2 cut(s) 774, 784
XceI RCATGY 1 cut(s) 553
XhoI CTCGAG 1 cut(s) 158
XmiI GTMKAC 1 cut(s) 116
XspI CTAG 1 cut(s) 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.