Protein strawberry notch
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79350 |
| fragaria_vesca | FvH4_3g13920 FvH4_3g13920 FvH4_3g13920 FvH4_3g13920 |
| malus_domestica | MD05G1239900.v1.1 MD10G1218000.v1.1 |
| prunus_persica | Prupe.4G126100_v2.0.a1 Prupe.4G126100_v2.0.a1 Prupe.4G126100_v2.0.a1 Prupe.4G126100_v2.0.a1 |
| pyrus_communis | pycom05g21600 pycom10g18380 |
| rosa_chinensis | RchiOBHm_Chr5g0023151 |
| rosa_laevigata | RLG00000032703 |
| rosa_multiflora | Rmu_co8366291.1_g000001 Rmu_sc0007300.1_g000019 Rmu_sc0015109.1_g000002 Rmu_sc0033377.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00056190 |
| rosa_rugosa | Rorug05G0077600 |
| rosa_samantha | Rh5AG163600 Rh5BG163000 Rh5CG177800 Rh5DG164200 |
| rosa_wichuraiana | Rw5G014760 Rw5G015070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 693 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 116 |
| AatII | GACGTC | 1 cut(s) | 3325 |
| Acc36I | ACCTGC | 3 cut(s) | 61, 693, 1900 |
| AccB1I | GGYRCC | 3 cut(s) | 786, 1090, 1585 |
| AccI | GTMKAC | 1 cut(s) | 2088 |
| AccII | CGCG | 3 cut(s) | 207, 326, 1669 |
| AccIII | TCCGGA | 2 cut(s) | 1721, 3356 |
| AclWI | GGATC | 8 cut(s) | 91, 254, 265, 536, 2235, 2469, 3063, 3216 |
| AcoI | YGGCCR | 1 cut(s) | 2944 |
| AcuI | CTGAAG | 2 cut(s) | 1179, 1634 |
| AcvI | CACGTG | 1 cut(s) | 3222 |
| AcyI | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| AdeI | CACNNNGTG | 1 cut(s) | 2705 |
| AflIII | ACRYGT | 4 cut(s) | 1115, 1425, 1566, 3658 |
| AgeI | ACCGGT | 1 cut(s) | 2582 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3326 |
| AjnI | CCWGG | 6 cut(s) | 186, 198, 357, 1243, 1843, 3204 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3272, 3304 |
| Alw21I | GWGCWC | 3 cut(s) | 1285, 1309, 2695 |
| Alw26I | GTCTC | 6 cut(s) | 376, 650, 673, 846, 2502, 3710 |
| AlwI | GGATC | 8 cut(s) | 91, 254, 265, 536, 2235, 2469, 3063, 3216 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 545, 1187 |
| Ama87I | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| Aor13HI | TCCGGA | 2 cut(s) | 1721, 3356 |
| ApaI | GGGCCC | 1 cut(s) | 1244 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 821, 853 |
| AsiGI | ACCGGT | 1 cut(s) | 2582 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1131 |
| AspLEI | GCGC | 5 cut(s) | 83, 209, 247, 287, 1669 |
| AsuC2I | CCSGG | 1 cut(s) | 1038 |
| AsuHPI | GGTGA | 5 cut(s) | 112, 716, 1136, 2572, 2717 |
| AsuII | TTCGAA | 2 cut(s) | 266, 3626 |
| AvaI | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| AvaII | GGWCC | 4 cut(s) | 73, 1034, 1724, 2041 |
| BaeGI | GKGCMC | 2 cut(s) | 1244, 3608 |
| BanI | GGYRCC | 3 cut(s) | 786, 1090, 1585 |
| BanII | GRGCYC | 3 cut(s) | 187, 591, 1244 |
| BauI | CACGAG | 1 cut(s) | 1164 |
| BbrPI | CACGTG | 1 cut(s) | 3222 |
| BbsI | GAAGAC | 3 cut(s) | 2146, 3325, 3562 |
| Bbv12I | GWGCWC | 3 cut(s) | 1285, 1309, 2695 |
| BceAI | ACGGC | 5 cut(s) | 268, 1341, 2434, 2931, 3653 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1301, 1335, 3223, 3257 |
| BciT130I | CCWGG | 6 cut(s) | 188, 200, 359, 1245, 1845, 3206 |
| BclI | TGATCA | 1 cut(s) | 2260 |
| BcnI | CCSGG | 1 cut(s) | 1038 |
| BcoDI | GTCTC | 6 cut(s) | 376, 650, 673, 846, 2502, 3710 |
| BfaI | CTAG | 6 cut(s) | 1277, 1406, 1515, 1604, 2825, 3300 |
| BfmI | CTRYAG | 3 cut(s) | 1593, 1817, 3560 |
| BfuAI | ACCTGC | 3 cut(s) | 61, 693, 1900 |
| BlpI | GCTNAGC | 1 cut(s) | 1149 |
| BmcAI | AGTACT | 1 cut(s) | 1657 |
| Bme1390I | CCNGG | 7 cut(s) | 188, 200, 359, 1038, 1245, 1845, 3206 |
| Bme18I | GGWCC | 4 cut(s) | 73, 1034, 1724, 2041 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3326 |
| BmeT110I | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| BmiI | GGNNCC | 7 cut(s) | 55, 332, 788, 1092, 1241, 1242, 1587 |
| BmrFI | CCNGG | 7 cut(s) | 188, 200, 359, 1038, 1245, 1845, 3206 |
| BmsI | GCATC | 8 cut(s) | 22, 832, 992, 1202, 1490, 2333, 2666, 2902 |
| BoxI | GACNNNNGTC | 1 cut(s) | 662 |
| BpiI | GAAGAC | 3 cut(s) | 2146, 3325, 3562 |
| BpmI | CTGGAG | 3 cut(s) | 365, 1680, 3195 |
| Bpu10I | CCTNAGC | 3 cut(s) | 585, 1581, 1938 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1149 |
| Bpu14I | TTCGAA | 2 cut(s) | 266, 3626 |
| BpuEI | CTTGAG | 2 cut(s) | 1307, 3266 |
| BpuMI | CCSGG | 1 cut(s) | 1038 |
| BsaAI | YACGTR | 4 cut(s) | 1007, 1118, 3222, 3659 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2656, 2680, 2833 |
| BsaHI | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| BsaI | GGTCTC | 1 cut(s) | 3710 |
| BsaWI | WCCGGW | 5 cut(s) | 333, 1721, 2582, 2845, 3356 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 57, 87, 726, 756, 3381, 3411 |
| Bse118I | RCCGGY | 3 cut(s) | 83, 1588, 2582 |
| Bse1I | ACTGG | 7 cut(s) | 26, 1126, 1192, 1663, 2043, 2096, 2302 |
| Bse3DI | GCAATG | 1 cut(s) | 978 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2656, 2680, 2833 |
| BseAI | TCCGGA | 2 cut(s) | 1721, 3356 |
| BseBI | CCWGG | 6 cut(s) | 188, 200, 359, 1245, 1845, 3206 |
| BseJI | GATNNNNATC | 3 cut(s) | 2656, 2680, 2833 |
| BseMI | GCAATG | 1 cut(s) | 978 |
| BseMII | CTCAG | 7 cut(s) | 356, 576, 981, 1665, 1848, 1952, 1983 |
| BseNI | ACTGG | 7 cut(s) | 26, 1126, 1192, 1663, 2043, 2096, 2302 |
| BseRI | GAGGAG | 4 cut(s) | 405, 440, 2009, 3263 |
| BseSI | GKGCMC | 2 cut(s) | 1244, 3608 |
| BseYI | CCCAGC | 2 cut(s) | 58, 3471 |
| BsgI | GTGCAG | 3 cut(s) | 89, 596, 1043 |
| Bsh1236I | CGCG | 3 cut(s) | 207, 326, 1669 |
| BshNI | GGYRCC | 3 cut(s) | 786, 1090, 1585 |
| BshTI | ACCGGT | 1 cut(s) | 2582 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1285, 1309, 2695 |
| BsiHKCI | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| BslFI | GGGAC | 2 cut(s) | 14, 3698 |
| BsmAI | GTCTC | 6 cut(s) | 376, 650, 673, 846, 2502, 3710 |
| BsmBI | CGTCTC | 1 cut(s) | 2502 |
| BsmFI | GGGAC | 2 cut(s) | 14, 3698 |
| Bso31I | GGTCTC | 1 cut(s) | 3710 |
| BsoBI | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| Bsp119I | TTCGAA | 2 cut(s) | 266, 3626 |
| Bsp120I | GGGCCC | 1 cut(s) | 1240 |
| Bsp1286I | GDGCHC | 7 cut(s) | 187, 591, 1244, 1285, 1309, 2695, 3608 |
| Bsp13I | TCCGGA | 2 cut(s) | 1721, 3356 |
| Bsp1407I | TGTACA | 1 cut(s) | 3363 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1149 |
| Bsp19I | CCATGG | 2 cut(s) | 1323, 2376 |
| Bsp68I | TCGCGA | 1 cut(s) | 326 |
| BspCNI | CTCAG | 7 cut(s) | 355, 577, 982, 1666, 1847, 1951, 1984 |
| BspEI | TCCGGA | 2 cut(s) | 1721, 3356 |
| BspFNI | CGCG | 3 cut(s) | 207, 326, 1669 |
| BspLI | GGNNCC | 7 cut(s) | 55, 332, 788, 1092, 1241, 1242, 1587 |
| BspMAI | CTGCAG | 3 cut(s) | 1597, 1821, 3564 |
| BspMI | ACCTGC | 3 cut(s) | 61, 693, 1900 |
| BspPI | GGATC | 8 cut(s) | 91, 254, 265, 536, 2235, 2469, 3063, 3216 |
| BspQI | GCTCTTC | 1 cut(s) | 2487 |
| BspT104I | TTCGAA | 2 cut(s) | 266, 3626 |
| BspT107I | GGYRCC | 3 cut(s) | 786, 1090, 1585 |
| BspTNI | GGTCTC | 1 cut(s) | 3710 |
| BsrDI | GCAATG | 1 cut(s) | 978 |
| BsrFI | RCCGGY | 3 cut(s) | 83, 1588, 2582 |
| BsrGI | TGTACA | 1 cut(s) | 3363 |
| BsrI | ACTGG | 7 cut(s) | 26, 1126, 1192, 1663, 2043, 2096, 2302 |
| BssAI | RCCGGY | 3 cut(s) | 83, 1588, 2582 |
| BssNI | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| BssSI | CACGAG | 1 cut(s) | 1164 |
| BssT1I | CCWWGG | 6 cut(s) | 564, 1228, 1323, 2376, 2539, 2635 |
| Bst2BI | CACGAG | 1 cut(s) | 1164 |
| Bst2UI | CCWGG | 6 cut(s) | 188, 200, 359, 1245, 1845, 3206 |
| Bst4CI | ACNGT | 6 cut(s) | 791, 2567, 3154, 3187, 3504, 3547 |
| Bst6I | CTCTTC | 5 cut(s) | 456, 844, 1820, 2162, 2487 |
| BstACI | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1021, 1190 |
| BstAUI | TGTACA | 1 cut(s) | 3363 |
| BstBAI | YACGTR | 4 cut(s) | 1007, 1118, 3222, 3659 |
| BstBI | TTCGAA | 2 cut(s) | 266, 3626 |
| BstDSI | CCRYGG | 3 cut(s) | 790, 1323, 2376 |
| BstEII | GGTNACC | 2 cut(s) | 118, 2705 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1791 |
| BstFNI | CGCG | 3 cut(s) | 207, 326, 1669 |
| BstHHI | GCGC | 5 cut(s) | 83, 209, 247, 287, 1669 |
| BstMAI | GTCTC | 6 cut(s) | 376, 650, 673, 846, 2502, 3710 |
| BstNI | CCWGG | 6 cut(s) | 188, 200, 359, 1245, 1845, 3206 |
| BstNSI | RCATGY | 6 cut(s) | 1429, 1570, 1576, 2055, 2395, 3511 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 662 |
| BstPI | GGTNACC | 2 cut(s) | 118, 2705 |
| BstSCI | CCNGG | 7 cut(s) | 186, 198, 357, 1036, 1243, 1843, 3204 |
| BstSFI | CTRYAG | 3 cut(s) | 1593, 1817, 3560 |
| BstSLI | GKGCMC | 2 cut(s) | 1244, 3608 |
| BstUI | CGCG | 3 cut(s) | 207, 326, 1669 |
| BstV2I | GAAGAC | 3 cut(s) | 2146, 3325, 3562 |
| BstX2I | RGATCY | 5 cut(s) | 96, 270, 541, 2227, 2461 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1087, 2383 |
| BstYI | RGATCY | 5 cut(s) | 96, 270, 541, 2227, 2461 |
| BtgI | CCRYGG | 3 cut(s) | 790, 1323, 2376 |
| BtgZI | GCGATG | 1 cut(s) | 1926 |
| BtsI | GCAGTG | 5 cut(s) | 32, 813, 1031, 2622, 3732 |
| BtsIMutI | CAGTG | 8 cut(s) | 32, 350, 813, 1031, 2622, 3192, 3509, 3732 |
| BtuMI | TCGCGA | 1 cut(s) | 326 |
| BveI | ACCTGC | 3 cut(s) | 61, 693, 1900 |
| CaiI | CAGNNNCTG | 2 cut(s) | 545, 1187 |
| CfoI | GCGC | 5 cut(s) | 83, 209, 247, 287, 1669 |
| Cfr10I | RCCGGY | 3 cut(s) | 83, 1588, 2582 |
| CseI | GACGC | 5 cut(s) | 119, 146, 928, 2636, 3525 |
| CspAI | ACCGGT | 1 cut(s) | 2582 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1191, 1226 |
| DraI | TTTAAA | 1 cut(s) | 630 |
| DraIII | CACNNNGTG | 1 cut(s) | 2705 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 116 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3326 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 116 |
| EaeI | YGGCCR | 1 cut(s) | 2944 |
| Eam1104I | CTCTTC | 5 cut(s) | 456, 844, 1820, 2162, 2487 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3326 |
| EarI | CTCTTC | 5 cut(s) | 456, 844, 1820, 2162, 2487 |
| EciI | GGCGGA | 2 cut(s) | 12, 201 |
| Eco130I | CCWWGG | 6 cut(s) | 564, 1228, 1323, 2376, 2539, 2635 |
| Eco147I | AGGCCT | 1 cut(s) | 2768 |
| Eco24I | GRGCYC | 3 cut(s) | 187, 591, 1244 |
| Eco31I | GGTCTC | 1 cut(s) | 3710 |
| Eco32I | GATATC | 1 cut(s) | 2254 |
| Eco47I | GGWCC | 4 cut(s) | 73, 1034, 1724, 2041 |
| Eco57I | CTGAAG | 2 cut(s) | 1179, 1634 |
| Eco72I | CACGTG | 1 cut(s) | 3222 |
| Eco88I | CYCGRG | 4 cut(s) | 167, 180, 422, 1728 |
| Eco91I | GGTNACC | 2 cut(s) | 118, 2705 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1791 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1240, 1241, 2273 |
| EcoO65I | GGTNACC | 2 cut(s) | 118, 2705 |
| EcoRI | GAATTC | 1 cut(s) | 125 |
| EcoRII | CCWGG | 6 cut(s) | 186, 198, 357, 1243, 1843, 3204 |
| EcoRV | GATATC | 1 cut(s) | 2254 |
| EcoT14I | CCWWGG | 6 cut(s) | 564, 1228, 1323, 2376, 2539, 2635 |
| EcoT22I | ATGCAT | 3 cut(s) | 2397, 2970, 3513 |
| EcoT38I | GRGCYC | 3 cut(s) | 187, 591, 1244 |
| ErhI | CCWWGG | 6 cut(s) | 564, 1228, 1323, 2376, 2539, 2635 |
| Esp3I | CGTCTC | 1 cut(s) | 2502 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1119, 1151, 2753, 2785, 2871, 2903 |
| FaqI | GGGAC | 2 cut(s) | 14, 3698 |
| FauI | CCCGC | 3 cut(s) | 212, 237, 402 |
| FbaI | TGATCA | 1 cut(s) | 2260 |
| FblI | GTMKAC | 1 cut(s) | 2088 |
| FriOI | GRGCYC | 3 cut(s) | 187, 591, 1244 |
| FspBI | CTAG | 6 cut(s) | 1277, 1406, 1515, 1604, 2825, 3300 |
| GlaI | GCGC | 5 cut(s) | 82, 208, 246, 286, 1668 |
| GsaI | CCCAGC | 2 cut(s) | 62, 3475 |
| GsuI | CTGGAG | 3 cut(s) | 365, 1680, 3195 |
| HgaI | GACGC | 5 cut(s) | 119, 146, 928, 2636, 3525 |
| HhaI | GCGC | 5 cut(s) | 83, 209, 247, 287, 1669 |
| Hin1I | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| Hin6I | GCGC | 5 cut(s) | 81, 207, 245, 285, 1667 |
| HinP1I | GCGC | 5 cut(s) | 81, 207, 245, 285, 1667 |
| HincII | GTYRAC | 1 cut(s) | 355 |
| HindII | GTYRAC | 1 cut(s) | 355 |
| HindIII | AAGCTT | 3 cut(s) | 1151, 2181, 3527 |
| HphI | GGTGA | 5 cut(s) | 112, 716, 1136, 2572, 2717 |
| Hpy166II | GTNNAC | 7 cut(s) | 355, 647, 889, 1004, 1034, 2089, 2389 |
| Hpy8I | GTNNAC | 7 cut(s) | 355, 647, 889, 1004, 1034, 2089, 2389 |
| Hpy99I | CGWCG | 2 cut(s) | 140, 2652 |
| HpyCH4III | ACNGT | 6 cut(s) | 791, 2567, 3154, 3187, 3504, 3547 |
| HpyCH4IV | ACGT | 7 cut(s) | 309, 1006, 1117, 2980, 3221, 3322, 3658 |
| HpySE526I | ACGT | 7 cut(s) | 309, 1006, 1117, 2980, 3221, 3322, 3658 |
| Hsp92I | GRCGYC | 3 cut(s) | 138, 939, 3322 |
| HspAI | GCGC | 5 cut(s) | 81, 207, 245, 285, 1667 |
| Kpn2I | TCCGGA | 2 cut(s) | 1721, 3356 |
| KroI | GCCGGC | 2 cut(s) | 83, 1588 |
| KroNI | GCCGGC | 2 cut(s) | 85, 1590 |
| Ksp22I | TGATCA | 1 cut(s) | 2260 |
| LguI | GCTCTTC | 1 cut(s) | 2487 |
| LweI | GCATC | 8 cut(s) | 22, 832, 992, 1202, 1490, 2333, 2666, 2902 |
| MaeI | CTAG | 6 cut(s) | 1277, 1406, 1515, 1604, 2825, 3300 |
| MaeII | ACGT | 7 cut(s) | 309, 1006, 1117, 2980, 3221, 3322, 3658 |
| MaeIII | GTNAC | 7 cut(s) | 118, 1214, 1684, 2068, 2341, 2705, 3217 |
| MfeI | CAATTG | 2 cut(s) | 146, 3520 |
| MflI | RGATCY | 5 cut(s) | 96, 270, 541, 2227, 2461 |
| MhlI | GDGCHC | 7 cut(s) | 187, 591, 1244, 1285, 1309, 2695, 3608 |
| MlyI | GAGTC | 3 cut(s) | 3089, 3236, 3401 |
| MmeI | TCCRAC | 3 cut(s) | 1282, 2956, 3396 |
| Mph1103I | ATGCAT | 3 cut(s) | 2397, 2970, 3513 |
| MroI | TCCGGA | 2 cut(s) | 1721, 3356 |
| MroNI | GCCGGC | 2 cut(s) | 83, 1588 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1131 |
| MseI | TTAA | 5 cut(s) | 306, 629, 770, 1044, 2198 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1328, 1571, 2381 |
| MspA1I | CMGCKG | 3 cut(s) | 78, 220, 1822 |
| MspR9I | CCNGG | 7 cut(s) | 188, 200, 359, 1038, 1245, 1845, 3206 |
| MunI | CAATTG | 2 cut(s) | 146, 3520 |
| MvaI | CCWGG | 6 cut(s) | 188, 200, 359, 1245, 1845, 3206 |
| MvnI | CGCG | 3 cut(s) | 207, 326, 1669 |
| NaeI | GCCGGC | 2 cut(s) | 85, 1590 |
| NciI | CCSGG | 1 cut(s) | 1038 |
| NcoI | CCATGG | 2 cut(s) | 1323, 2376 |
| NgoMIV | GCCGGC | 2 cut(s) | 83, 1588 |
| NlaIV | GGNNCC | 7 cut(s) | 55, 332, 788, 1092, 1241, 1242, 1587 |
| NmuCI | GTSAC | 5 cut(s) | 118, 1684, 2068, 2705, 3217 |
| NruI | TCGCGA | 1 cut(s) | 326 |
| NsiI | ATGCAT | 3 cut(s) | 2397, 2970, 3513 |
| NspI | RCATGY | 6 cut(s) | 1429, 1570, 1576, 2055, 2395, 3511 |
| NspV | TTCGAA | 2 cut(s) | 266, 3626 |
| PaeI | GCATGC | 1 cut(s) | 3511 |
| PaeR7I | CTCGAG | 1 cut(s) | 1728 |
| PaqCI | CACCTGC | 1 cut(s) | 693 |
| PceI | AGGCCT | 1 cut(s) | 2768 |
| PciI | ACATGT | 2 cut(s) | 1425, 1566 |
| PciSI | GCTCTTC | 1 cut(s) | 2487 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3664 |
| PdiI | GCCGGC | 2 cut(s) | 85, 1590 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1131 |
| PinAI | ACCGGT | 1 cut(s) | 2582 |
| PleI | GAGTC | 3 cut(s) | 3089, 3235, 3400 |
| PmaCI | CACGTG | 1 cut(s) | 3222 |
| PmlI | CACGTG | 1 cut(s) | 3222 |
| PpsI | GAGTC | 3 cut(s) | 3089, 3235, 3400 |
| Ppu21I | YACGTR | 4 cut(s) | 1007, 1118, 3222, 3659 |
| PscI | ACATGT | 2 cut(s) | 1425, 1566 |
| PshAI | GACNNNNGTC | 1 cut(s) | 662 |
| Psp6I | CCWGG | 6 cut(s) | 186, 198, 357, 1243, 1843, 3204 |
| PspCI | CACGTG | 1 cut(s) | 3222 |
| PspEI | GGTNACC | 2 cut(s) | 118, 2705 |
| PspFI | CCCAGC | 2 cut(s) | 58, 3471 |
| PspGI | CCWGG | 6 cut(s) | 186, 198, 357, 1243, 1843, 3204 |
| PspN4I | GGNNCC | 7 cut(s) | 55, 332, 788, 1092, 1241, 1242, 1587 |
| PspOMI | GGGCCC | 1 cut(s) | 1240 |
| PstI | CTGCAG | 3 cut(s) | 1597, 1821, 3564 |
| PstNI | CAGNNNCTG | 2 cut(s) | 545, 1187 |
| PsuI | RGATCY | 5 cut(s) | 96, 270, 541, 2227, 2461 |
| RruI | TCGCGA | 1 cut(s) | 326 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1328, 1571, 2381 |
| SapI | GCTCTTC | 1 cut(s) | 2487 |
| SaqAI | TTAA | 5 cut(s) | 306, 629, 770, 1044, 2198 |
| ScaI | AGTACT | 1 cut(s) | 1657 |
| SchI | GAGTC | 3 cut(s) | 3089, 3236, 3401 |
| ScrFI | CCNGG | 7 cut(s) | 188, 200, 359, 1038, 1245, 1845, 3206 |
| SduI | GDGCHC | 7 cut(s) | 187, 591, 1244, 1285, 1309, 2695, 3608 |
| SfaNI | GCATC | 8 cut(s) | 22, 832, 992, 1202, 1490, 2333, 2666, 2902 |
| SfcI | CTRYAG | 3 cut(s) | 1593, 1817, 3560 |
| Sfr274I | CTCGAG | 1 cut(s) | 1728 |
| SfuI | TTCGAA | 2 cut(s) | 266, 3626 |
| SinI | GGWCC | 4 cut(s) | 73, 1034, 1724, 2041 |
| SlaI | CTCGAG | 1 cut(s) | 1728 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1328, 1571, 2381 |
| SmlI | CTYRAG | 3 cut(s) | 1286, 1728, 3245 |
| SmoI | CTYRAG | 3 cut(s) | 1286, 1728, 3245 |
| SphI | GCATGC | 1 cut(s) | 3511 |
| SseBI | AGGCCT | 1 cut(s) | 2768 |
| SspMI | CTAG | 6 cut(s) | 1277, 1406, 1515, 1604, 2825, 3300 |
| StuI | AGGCCT | 1 cut(s) | 2768 |
| StyD4I | CCNGG | 7 cut(s) | 186, 198, 357, 1036, 1243, 1843, 3204 |
| StyI | CCWWGG | 6 cut(s) | 564, 1228, 1323, 2376, 2539, 2635 |
| TaaI | ACNGT | 6 cut(s) | 791, 2567, 3154, 3187, 3504, 3547 |
| TaiI | ACGT | 7 cut(s) | 312, 1009, 1120, 2983, 3224, 3325, 3661 |
| TatI | WGTACW | 4 cut(s) | 886, 1655, 3363, 3542 |
| TauI | GCSGC | 4 cut(s) | 93, 166, 235, 2824 |
| Tru1I | TTAA | 5 cut(s) | 306, 629, 770, 1044, 2198 |
| Tru9I | TTAA | 5 cut(s) | 306, 629, 770, 1044, 2198 |
| TscAI | CASTG | 8 cut(s) | 39, 350, 813, 1031, 2622, 3192, 3509, 3732 |
| TseFI | GTSAC | 5 cut(s) | 118, 1684, 2068, 2705, 3217 |
| Tsp45I | GTSAC | 5 cut(s) | 118, 1684, 2068, 2705, 3217 |
| TspGWI | ACGGA | 5 cut(s) | 1256, 1446, 2371, 3365, 3724 |
| TspRI | CASTG | 8 cut(s) | 39, 350, 813, 1031, 2622, 3192, 3509, 3732 |
| VpaK11BI | GGWCC | 4 cut(s) | 73, 1034, 1724, 2041 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1791 |
| XceI | RCATGY | 6 cut(s) | 1429, 1570, 1576, 2055, 2395, 3511 |
| XhoI | CTCGAG | 1 cut(s) | 1728 |
| XmiI | GTMKAC | 1 cut(s) | 2088 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1131 |
| XspI | CTAG | 6 cut(s) | 1277, 1406, 1515, 1604, 2825, 3300 |
| ZraI | GACGTC | 1 cut(s) | 3323 |
| ZrmI | AGTACT | 1 cut(s) | 1657 |
| Zsp2I | ATGCAT | 3 cut(s) | 2397, 2970, 3513 |