pycom10g20890

Ferredoxin-NADP reductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
23643170 .. 23645206
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g20890.3

Sequence Viewer

Length: 1137 bp
ATGTCTCATTTGGCTCTCTCTCAGGGTTCACTGACTGTGACTGTTCCGCTTGGAAGTGATTTCTCCCTCCGAAGATCTGTGTTCAAGGCACGAAGTGTTAACTTTAATGATAAATCATGGGCTCCTATACCTTTGGACTTCAAAACGAAAAAGGGACGGCTGAGAAATCAGCGCATTCTATGCATGTCAGTGCAACAAGCAAGTGCGCCTAAAGTTAATGTAGCTCCTCTACAACTTGAGGATGCTAATGAGCCCCCATTAAATACATACAAGCCTAAGGAGCCTTATACTGCAACCATTCTTTCTGTTGAGAGGATTGTCGGCCCAAATGCTCCTGGAGAGACTTGCCATATTGTGATTGATCATGGTGGTAATGTGCCTTACTGGGAAGGGCAAAGTTATGGTGTCATCCCTCCGGGGGAAAACCCAAAGAAACCTGGGGCTCCGCACAATGTTCGCCTTTACTCAATTGCATCGACAAGGTATGGAGACTATTTTGATGGCAAGACAACTAGTTTGTGTGTTCGTCGTGCTGTCTATTACGACCCTGAGACAGGAAAGGAGGATCGATCCAAGAATGGTGTATGCAGCAACTTTTTATGCAACTCCAAACCTGGTGATAAAATTAAGATCACAGGGCCTGCTGGCAAGATCATGCTTTTGCCTGAAGACAACCCAAATGCCACCCACATTATGATTGCAACTGGCACTGGTATTGCCCCGTACAGAGGTTACCTCCGTCGCATGTTCATGGAATCTGTTCCCAAATTCAAGTTTGGCGGCCTTGCATGGCTATTCCTTGGTGTGGCCAACACTGATAGTCTCCTATATGATGAAGAATTCACCAAGTATCTCAAGGACTACCCCGATAATTTCCGGTACGACATAGCACTTAGCAGAGAACAGAAGAACCAGAGAGGAGGGAAGATGTATGTTCAGGATAAAATCGAGGAGTACAGTGACGAGATCTTTAAGCTATTGGACAACGGGGCCCACATATACTTCTGCGGGCTCAAGGGAATGATGCCCGGGATTCAAGAAACCTTGAAGAGGGTTGCGGTTGAAAGAGGGGAGAGCTGGGAGGAGAAGCTTTCACAGCTGAAAAAGAACAAGCAATGGCATGTGGAAGTCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

379

Amino Acids

42.58

Weight (kDa)

9.03

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1131
AciI CCGC 5 cut(s) 47, 446, 780, 1008, 1058
AclWI GGATC 2 cut(s) 564, 573
AcoI YGGCCR 1 cut(s) 807
AcsI RAATTY 2 cut(s) 767, 839
AcuI CTGAAG 1 cut(s) 687
AdeI CACNNNGTG 1 cut(s) 95
AfaI GTAC 3 cut(s) 725, 881, 956
AfiI CCNNNNNNNGG 5 cut(s) 418, 554, 728, 805, 1050
AgsI TTSAA 6 cut(s) 85, 142, 772, 1037, 1048, 1064
AhlI ACTAGT 1 cut(s) 512
AjnI CCWGG 3 cut(s) 334, 436, 613
AluBI AGCT 5 cut(s) 224, 976, 1077, 1090, 1099
AluI AGCT 5 cut(s) 224, 976, 1077, 1090, 1099
Alw26I GTCTC 5 cut(s) 9, 335, 483, 545, 827
AlwI GGATC 2 cut(s) 564, 573
AlwNI CAGNNNCTG 1 cut(s) 641
Ama87I CYCGRG 1 cut(s) 1028
AoxI GGCC 5 cut(s) 322, 638, 781, 807, 990
ApaI GGGCCC 1 cut(s) 994
ApeKI GCWGC 1 cut(s) 588
ApoI RAATTY 2 cut(s) 767, 839
ArsI GACNNNNNNTTYG 2 cut(s) 499, 531
Asp700I GAANNNNTTC 1 cut(s) 759
AspLEI GCGC 2 cut(s) 174, 208
AspS9I GGNCC 4 cut(s) 323, 638, 990, 991
AsuC2I CCSGG 3 cut(s) 417, 1029, 1030
AsuHPI GGTGA 2 cut(s) 629, 835
AvaI CYCGRG 1 cut(s) 1028
AxyI CCTNAGG 1 cut(s) 276
BaeGI GKGCMC 1 cut(s) 994
BalI TGGCCA 1 cut(s) 809
BanII GRGCYC 5 cut(s) 124, 255, 445, 994, 1014
BbsI GAAGAC 1 cut(s) 675
BbvI GCAGC 1 cut(s) 600
BccI CCATC 1 cut(s) 494
BceAI ACGGC 1 cut(s) 173
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 3 cut(s) 336, 438, 615
BclI TGATCA 1 cut(s) 361
BcnI CCSGG 3 cut(s) 417, 1029, 1030
BcoDI GTCTC 5 cut(s) 9, 335, 483, 545, 827
BcuI ACTAGT 1 cut(s) 512
BfaI CTAG 1 cut(s) 513
BglII AGATCT 2 cut(s) 74, 966
BisI GCNGC 2 cut(s) 589, 781
BlsI GCNGC 2 cut(s) 590, 782
Bme1390I CCNGG 6 cut(s) 336, 417, 438, 615, 1029, 1030
BmeT110I CYCGRG 1 cut(s) 1028
BmgT120I GGNCC 4 cut(s) 323, 638, 990, 991
BmiI GGNNCC 5 cut(s) 123, 282, 444, 991, 992
BmrFI CCNGG 6 cut(s) 336, 417, 438, 615, 1029, 1030
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 3 cut(s) 232, 482, 1014
BmuI ACTGGG 1 cut(s) 394
BpiI GAAGAC 1 cut(s) 675
BplI GAGNNNNNCTC 2 cut(s) 720, 752
BpmI CTGGAG 1 cut(s) 357
BpuEI CTTGAG 3 cut(s) 257, 839, 998
BpuMI CCSGG 3 cut(s) 417, 1029, 1030
Bsa29I ATCGAT 1 cut(s) 568
BsaJI CCNNGG 4 cut(s) 416, 437, 799, 1028
BsaWI WCCGGW 1 cut(s) 876
Bsc4I CCNNNNNNNGG 5 cut(s) 418, 554, 728, 805, 1050
Bse1I ACTGG 3 cut(s) 389, 709, 715
Bse21I CCTNAGG 1 cut(s) 276
Bse3DI GCAATG 1 cut(s) 1121
BseBI CCWGG 3 cut(s) 336, 438, 615
BseCI ATCGAT 1 cut(s) 568
BseDI CCNNGG 4 cut(s) 416, 437, 799, 1028
BseGI GGATG 2 cut(s) 247, 408
BseLI CCNNNNNNNGG 5 cut(s) 418, 554, 728, 805, 1050
BseMI GCAATG 1 cut(s) 1121
BseMII CTCAG 3 cut(s) 35, 152, 540
BseNI ACTGG 3 cut(s) 389, 709, 715
BseRI GAGGAG 4 cut(s) 216, 933, 965, 1097
BseSI GKGCMC 1 cut(s) 994
BseXI GCAGC 1 cut(s) 600
BseYI CCCAGC 1 cut(s) 1077
BshFI GGCC 5 cut(s) 324, 640, 783, 809, 992
BshVI ATCGAT 1 cut(s) 568
BsiHKCI CYCGRG 1 cut(s) 1028
BsiSI CCGG 3 cut(s) 416, 877, 1029
BslFI GGGAC 1 cut(s) 168
BslI CCNNNNNNNGG 5 cut(s) 418, 554, 728, 805, 1050
BsmAI GTCTC 5 cut(s) 9, 335, 483, 545, 827
BsmFI GGGAC 1 cut(s) 168
BsmI GAATGC 1 cut(s) 174
BsnI GGCC 5 cut(s) 324, 640, 783, 809, 992
BsoBI CYCGRG 1 cut(s) 1028
Bsp120I GGGCCC 1 cut(s) 990
Bsp1286I GDGCHC 5 cut(s) 124, 255, 445, 994, 1014
Bsp143I GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
BspACI CCGC 5 cut(s) 47, 446, 780, 1008, 1058
BspANI GGCC 5 cut(s) 324, 640, 783, 809, 992
BspCNI CTCAG 3 cut(s) 34, 153, 541
BspDI ATCGAT 1 cut(s) 568
BspLI GGNNCC 5 cut(s) 123, 282, 444, 991, 992
BspPI GGATC 2 cut(s) 564, 573
BsrDI GCAATG 1 cut(s) 1121
BsrI ACTGG 3 cut(s) 389, 709, 715
BssECI CCNNGG 4 cut(s) 416, 437, 799, 1028
BssMI GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
BssT1I CCWWGG 1 cut(s) 799
Bst2UI CCWGG 3 cut(s) 336, 438, 615
Bst4CI ACNGT 3 cut(s) 37, 43, 959
Bst6I CTCTTC 1 cut(s) 1043
BstAPI GCANNNNNTGC 1 cut(s) 180
BstC8I GCNNGC 3 cut(s) 642, 646, 1010
BstDEI CTNAG 5 cut(s) 21, 161, 276, 549, 893
BstEII GGTNACC 1 cut(s) 731
BstENI CCTNNNNNAGG 2 cut(s) 552, 1048
BstF5I GGATG 2 cut(s) 247, 408
BstHHI GCGC 2 cut(s) 174, 208
BstKTI GATC 7 cut(s) 77, 364, 568, 572, 633, 654, 969
BstMAI GTCTC 5 cut(s) 9, 335, 483, 545, 827
BstMBI GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
BstMWI GCNNNNNNNGC 3 cut(s) 180, 280, 1096
BstNI CCWGG 3 cut(s) 336, 438, 615
BstNSI RCATGY 3 cut(s) 187, 748, 1124
BstPI GGTNACC 1 cut(s) 731
BstSCI CCNGG 6 cut(s) 334, 415, 436, 613, 1027, 1028
BstSLI GKGCMC 1 cut(s) 994
BstV1I GCAGC 1 cut(s) 600
BstV2I GAAGAC 1 cut(s) 675
BstX2I RGATCY 2 cut(s) 74, 966
BstYI RGATCY 2 cut(s) 74, 966
Bsu15I ATCGAT 1 cut(s) 568
Bsu36I CCTNAGG 1 cut(s) 276
BsuRI GGCC 5 cut(s) 324, 640, 783, 809, 992
BsuTUI ATCGAT 1 cut(s) 568
BtsCI GGATG 2 cut(s) 247, 408
BtsIMutI CAGTG 5 cut(s) 29, 195, 708, 813, 964
Cac8I GCNNGC 3 cut(s) 642, 646, 1010
CaiI CAGNNNCTG 1 cut(s) 641
CfoI GCGC 2 cut(s) 174, 208
Cfr13I GGNCC 4 cut(s) 323, 638, 990, 991
Cfr9I CCCGGG 1 cut(s) 1028
ClaI ATCGAT 1 cut(s) 568
CsiI ACCWGGT 1 cut(s) 613
Csp6I GTAC 3 cut(s) 724, 880, 955
CviAII CATG 8 cut(s) 117, 184, 365, 655, 745, 751, 789, 1121
CviQI GTAC 3 cut(s) 724, 880, 955
DdeI CTNAG 5 cut(s) 21, 161, 276, 549, 893
DpnI GATC 7 cut(s) 76, 363, 567, 571, 632, 653, 968
DpnII GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
DraIII CACNNNGTG 1 cut(s) 95
EaeI YGGCCR 1 cut(s) 807
Eam1104I CTCTTC 1 cut(s) 1043
EarI CTCTTC 1 cut(s) 1043
Eco130I CCWWGG 1 cut(s) 799
Eco24I GRGCYC 5 cut(s) 124, 255, 445, 994, 1014
Eco57I CTGAAG 1 cut(s) 687
Eco81I CCTNAGG 1 cut(s) 276
Eco88I CYCGRG 1 cut(s) 1028
Eco91I GGTNACC 1 cut(s) 731
EcoNI CCTNNNNNAGG 2 cut(s) 552, 1048
EcoO109I RGGNCCY 2 cut(s) 638, 990
EcoO65I GGTNACC 1 cut(s) 731
EcoRI GAATTC 1 cut(s) 839
EcoRII CCWGG 3 cut(s) 334, 436, 613
EcoT14I CCWWGG 1 cut(s) 799
EcoT22I ATGCAT 1 cut(s) 185
EcoT38I GRGCYC 5 cut(s) 124, 255, 445, 994, 1014
ErhI CCWWGG 1 cut(s) 799
FaeI CATG 8 cut(s) 120, 187, 368, 658, 748, 754, 792, 1124
FaqI GGGAC 1 cut(s) 168
FatI CATG 8 cut(s) 116, 183, 364, 654, 744, 750, 788, 1120
FauI CCCGC 1 cut(s) 1001
FbaI TGATCA 1 cut(s) 361
FblI GTMKAC 1 cut(s) 1131
Fnu4HI GCNGC 2 cut(s) 589, 781
FokI GGATG 2 cut(s) 254, 395
FriOI GRGCYC 5 cut(s) 124, 255, 445, 994, 1014
Fsp4HI GCNGC 2 cut(s) 589, 781
FspBI CTAG 1 cut(s) 513
GlaI GCGC 2 cut(s) 173, 207
GluI GCNGC 2 cut(s) 589, 781
GsaI CCCAGC 1 cut(s) 1081
GsuI CTGGAG 1 cut(s) 357
HaeIII GGCC 5 cut(s) 324, 640, 783, 809, 992
HapII CCGG 3 cut(s) 416, 877, 1029
HhaI GCGC 2 cut(s) 174, 208
Hin1II CATG 8 cut(s) 120, 187, 368, 658, 748, 754, 792, 1124
Hin6I GCGC 2 cut(s) 172, 206
HinP1I GCGC 2 cut(s) 172, 206
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HindIII AAGCTT 1 cut(s) 1088
HinfI GANTC 2 cut(s) 755, 1033
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 3 cut(s) 416, 877, 1029
HphI GGTGA 2 cut(s) 629, 835
Hpy166II GTNNAC 3 cut(s) 29, 100, 1132
Hpy188I TCNGA 1 cut(s) 71
Hpy188III TCNNGA 2 cut(s) 938, 1037
Hpy8I GTNNAC 3 cut(s) 29, 100, 1132
Hpy99I CGWCG 2 cut(s) 531, 744
HpyAV CCTTC 1 cut(s) 383
HpyCH4III ACNGT 3 cut(s) 37, 43, 959
HpyCH4V TGCA 8 cut(s) 183, 193, 293, 473, 588, 603, 701, 788
HpyF10VI GCNNNNNNNGC 3 cut(s) 180, 280, 1096
HpyF3I CTNAG 5 cut(s) 21, 161, 276, 549, 893
Hsp92II CATG 8 cut(s) 120, 187, 368, 658, 748, 754, 792, 1124
HspAI GCGC 2 cut(s) 172, 206
Ksp22I TGATCA 1 cut(s) 361
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
LmnI GCTCC 5 cut(s) 127, 229, 280, 337, 448
Lsp1109I GCAGC 1 cut(s) 600
LweI GCATC 3 cut(s) 232, 482, 1014
MabI ACCWGGT 1 cut(s) 613
MaeI CTAG 1 cut(s) 513
MaeIII GTNAC 3 cut(s) 37, 731, 959
MalI GATC 7 cut(s) 76, 363, 567, 571, 632, 653, 968
MboI GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
MboII GAAGA 6 cut(s) 84, 680, 848, 919, 937, 1060
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 2 cut(s) 74, 966
MhlI GDGCHC 5 cut(s) 124, 255, 445, 994, 1014
MlsI TGGCCA 1 cut(s) 809
MluCI AATT 5 cut(s) 468, 624, 767, 839, 871
MluNI TGGCCA 1 cut(s) 809
Mox20I TGGCCA 1 cut(s) 809
Mph1103I ATGCAT 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 759
MscI TGGCCA 1 cut(s) 809
MseI TTAA 6 cut(s) 99, 105, 216, 260, 627, 972
MslI CAYNNNNRTG 2 cut(s) 188, 749
Msp20I TGGCCA 1 cut(s) 809
MspA1I CMGCKG 1 cut(s) 1099
MspI CCGG 3 cut(s) 416, 877, 1029
MspR9I CCNGG 6 cut(s) 336, 417, 438, 615, 1029, 1030
MunI CAATTG 1 cut(s) 468
Mva1269I GAATGC 1 cut(s) 174
MvaI CCWGG 3 cut(s) 336, 438, 615
MwoI GCNNNNNNNGC 3 cut(s) 180, 280, 1096
NciI CCSGG 3 cut(s) 417, 1029, 1030
NdeII GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
NlaIII CATG 8 cut(s) 120, 187, 368, 658, 748, 754, 792, 1124
NlaIV GGNNCC 5 cut(s) 123, 282, 444, 991, 992
NmuCI GTSAC 2 cut(s) 37, 959
NsiI ATGCAT 1 cut(s) 185
NspI RCATGY 3 cut(s) 187, 748, 1124
PctI GAATGC 1 cut(s) 174
PdmI GAANNNNTTC 1 cut(s) 759
PfeI GAWTC 2 cut(s) 755, 1033
PfoI TCCNGGA 1 cut(s) 334
PkrI GCNGC 2 cut(s) 590, 782
Psp6I CCWGG 3 cut(s) 334, 436, 613
PspEI GGTNACC 1 cut(s) 731
PspFI CCCAGC 1 cut(s) 1077
PspGI CCWGG 3 cut(s) 334, 436, 613
PspN4I GGNNCC 5 cut(s) 123, 282, 444, 991, 992
PspOMI GGGCCC 1 cut(s) 990
PspPI GGNCC 4 cut(s) 323, 638, 990, 991
PstNI CAGNNNCTG 1 cut(s) 641
PsuI RGATCY 2 cut(s) 74, 966
PvuII CAGCTG 1 cut(s) 1099
RsaI GTAC 3 cut(s) 725, 881, 956
RsaNI GTAC 3 cut(s) 724, 880, 955
RseI CAYNNNNRTG 2 cut(s) 188, 749
SaqAI TTAA 6 cut(s) 99, 105, 216, 260, 627, 972
SatI GCNGC 2 cut(s) 589, 781
Sau3AI GATC 7 cut(s) 74, 361, 565, 569, 630, 651, 966
Sau96I GGNCC 4 cut(s) 323, 638, 990, 991
ScrFI CCNGG 6 cut(s) 336, 417, 438, 615, 1029, 1030
SduI GDGCHC 5 cut(s) 124, 255, 445, 994, 1014
SexAI ACCWGGT 1 cut(s) 613
SfaNI GCATC 3 cut(s) 232, 482, 1014
SmaI CCCGGG 1 cut(s) 1030
SmiMI CAYNNNNRTG 2 cut(s) 188, 749
SmlI CTYRAG 3 cut(s) 236, 854, 1013
SmoI CTYRAG 3 cut(s) 236, 854, 1013
SpeI ACTAGT 1 cut(s) 512
Sse9I AATT 5 cut(s) 468, 624, 767, 839, 871
SsiI CCGC 5 cut(s) 47, 446, 780, 1008, 1058
SspMI CTAG 1 cut(s) 513
StyD4I CCNGG 6 cut(s) 334, 415, 436, 613, 1027, 1028
StyI CCWWGG 1 cut(s) 799
TaaI ACNGT 3 cut(s) 37, 43, 959
TaqI TCGA 3 cut(s) 476, 568, 948
TasI AATT 5 cut(s) 468, 624, 767, 839, 871
TatI WGTACW 1 cut(s) 954
TauI GCSGC 1 cut(s) 783
TfiI GAWTC 2 cut(s) 755, 1033
Tru1I TTAA 6 cut(s) 99, 105, 216, 260, 627, 972
Tru9I TTAA 6 cut(s) 99, 105, 216, 260, 627, 972
TscAI CASTG 5 cut(s) 36, 195, 715, 820, 964
TseFI GTSAC 2 cut(s) 37, 959
TseI GCWGC 1 cut(s) 588
Tsp45I GTSAC 2 cut(s) 37, 959
TspDTI ATGAA 2 cut(s) 739, 849
TspGWI ACGGA 1 cut(s) 728
TspMI CCCGGG 1 cut(s) 1028
TspRI CASTG 5 cut(s) 36, 195, 715, 820, 964
XagI CCTNNNNNAGG 2 cut(s) 552, 1048
XapI RAATTY 2 cut(s) 767, 839
XceI RCATGY 3 cut(s) 187, 748, 1124
XmaI CCCGGG 1 cut(s) 1028
XmiI GTMKAC 1 cut(s) 1131
XmnI GAANNNNTTC 1 cut(s) 759
XspI CTAG 1 cut(s) 513
Zsp2I ATGCAT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.