pycom10g24520

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0010260
Physical Location & Seq
Reverse (-)
26360885 .. 26362574
1690 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1644 bp
ATGGTCGAAGGTTTCGAAGTCGGCGGCGTCCCTTTCAACCCCGACGGGTGGGGCCCACCTGAGAGCACCACCACCTCCAATTTGCCCCAAAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGAGAAGCTCGGCCGGATCGCCGACTGGACCCGCACCTTCAACAATCCAGCCCGCTCCAAGAACCCATCCGACGCCGTCTTCGACTTCTCCAACGGTGAGTCGTTCCCCGGCTCCGCCGATGACGACGCGTCGTTCCGTCTCGTCGATGGAAAGCCCCCGCCGCGCCCCAGATTCGGCCCCAAGTGGCGGTTCCAGCAGCAGCGACAGCTCCCCCACCGCCGCGACGAGGAGGTCGAGGCCAAGAAGCGCGAGGCCGAGAAGGAGCGAGCCCGCCGTGACCGCCAGTACAACATGAACCGGTCCAACGTCAATGCCCCGCGCCGAGAAGCTGCGGTTTTCAAATCTTCCGTCGATATCCAACCTGAGTGGAACATGCTCGAACAGATCCCCTTCTCCACATTCTCGAAGCTCTCGTTTTCGGTTCCGGAGCCGGAGGATCTCCTCTTCTGCGGCGGACTCGAGTTCTACGATCGCTCTGTCGATCGAATCACCCCCAAGAACGAGAGGCGGCTCGAGCGGTTCAAGAACAGGAACTTCTTCAAGGATAAAGCCACAGTCTTTGCCACAGACACCATTCTCTCGACTCTTATGTGCGCACCCAGGTCAGTTTACTCTTGGGATATTGTTGTTCAGAAAGTTGGGAACAAATTATTCTTTGATAAACGTGATGGGTCGCAATTGGATTTGCTTTCGGTTCACGAGACATCTCAGGAGCCATTGCCTGAAGCTAAGGATGATATCAATTCAGCTTATTCGTTGAGTGTCGAGGCTGCTTATATCAATCAGAACTTTTCACAGCAGGTTTTGGTTAGGGATGGGAATAAGGTCACATTCGATGAGCCTAACCCGTTTGCAAACGAAGGAGAGGAGGTTGCTGCCGTTGCTTATCGCTACCGAAGGTGGAAGCTTGAGGAGGGAATGTATCTGGTTGCGAGGTGTGAGGTGCAAAGTGTTATGGAGGTGAATAATCAGAGGTCGTTTTTGACCCTGAATGCGCTTAATGAGTTTGATCCCAAGTATTCGGGTGTCGATTGGAGGCAGAAATTGGAGACTCAGAGGGGTGCTGTATTGGCAACTGAGCTTAAGAACAATGCCAACAAGTTGGCTAAATGGACTGCCCAAGCCCTCTTGGCCAGTGCCGATTTGATGAAGTTGGGTTACGTTTCGAGGGTTCATCCTCGTGATCACTTTAACCATGTGATTTTGGCTGTGGTAGGATACAAGCCCAAGGAGTTTGCCTCGCAGATTAATCTCAACCAAAACAGTATGTGGGGGATTGTGAAGTCGATTGTGGACTTGTGTATGAAGTTAAATGAGGGCAAGTATGTGCTTGTTAAGGACCCGTCGAAGCCCCAAGTTAGAATCTATGAGGTGCCTCCAGATGCTTTTGAGAATGATTATGTGGAGGAACCACTGCCCGAGGATGAGCAAGTTCAGCCACCCACGGAGGAAGGCCAAGGTGCTGAGCCGAATGTTGCTGCTAATGATGTTGAGGATAAGCCGGCTGATGCTGTTGCCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

548

Amino Acids

62.23

Weight (kDa)

5.34

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 7 - 497 2.6e-181 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 350
Acc16I TGCGCA 1 cut(s) 715
Acc36I ACCTGC 1 cut(s) 910
AccB1I GGYRCC 1 cut(s) 1492
AccBSI CCGCTC 3 cut(s) 117, 174, 637
AccII CGCG 5 cut(s) 248, 283, 342, 369, 439
AccIII TCCGGA 1 cut(s) 544
AclWI GGATC 4 cut(s) 143, 499, 564, 1124
AcoI YGGCCR 2 cut(s) 130, 1251
AcuI CTGAAG 1 cut(s) 864
AcyI GRCGYC 2 cut(s) 27, 192
AfaI GTAC 1 cut(s) 407
AfiI CCNNNNNNNGG 4 cut(s) 48, 293, 306, 346
AflII CTTAAG 1 cut(s) 1202
AflIII ACRYGT 1 cut(s) 246
AgeI ACCGGT 1 cut(s) 417
AgsI TTSAA 5 cut(s) 37, 160, 460, 643, 661
AhdI GACNNNNNGTC 1 cut(s) 247
AjnI CCWGG 1 cut(s) 719
AjuI GAANNNNNNNTTGG 2 cut(s) 293, 325
AluBI AGCT 8 cut(s) 127, 328, 449, 529, 848, 869, 1027, 1201
AluI AGCT 8 cut(s) 127, 328, 449, 529, 848, 869, 1027, 1201
Alw21I GWGCWC 1 cut(s) 68
Alw26I GTCTC 3 cut(s) 263, 815, 1163
AlwI GGATC 4 cut(s) 143, 499, 564, 1124
Ama87I CYCGRG 3 cut(s) 578, 632, 1538
Aor13HI TCCGGA 1 cut(s) 544
AoxI GGCC 7 cut(s) 52, 130, 295, 357, 372, 1251, 1573
ApaI GGGCCC 1 cut(s) 56
ApeKI GCWGC 6 cut(s) 316, 319, 449, 890, 995, 1598
ArsI GACNNNNNNTTYG 4 cut(s) 182, 214, 453, 485
AseI ATTAAT 1 cut(s) 1368
AsiGI ACCGGT 1 cut(s) 417
Asp700I GAANNNNTTC 1 cut(s) 656
AspLEI GCGC 5 cut(s) 285, 369, 441, 716, 1117
AspS9I GGNCC 6 cut(s) 52, 53, 147, 296, 420, 1459
AsuC2I CCSGG 1 cut(s) 228
AsuHPI GGTGA 3 cut(s) 227, 601, 1093
AsuII TTCGAA 1 cut(s) 15
AvaI CYCGRG 3 cut(s) 578, 632, 1538
AvaII GGWCC 3 cut(s) 147, 420, 1459
BaeGI GKGCMC 1 cut(s) 56
BalI TGGCCA 1 cut(s) 1253
BanI GGYRCC 1 cut(s) 1492
BanII GRGCYC 2 cut(s) 56, 391
BarI GAAGNNNNNNTAC 2 cut(s) 1262, 1294
BauI CACGAG 2 cut(s) 818, 1299
BbsI GAAGAC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 68
BbvI GCAGC 6 cut(s) 328, 331, 436, 877, 982, 1585
BccI CCATC 4 cut(s) 193, 260, 782, 929
BceAI ACGGC 3 cut(s) 179, 378, 983
BciT130I CCWGG 1 cut(s) 721
BciVI GTATCC 1 cut(s) 1331
BclI TGATCA 1 cut(s) 1303
BcnI CCSGG 1 cut(s) 228
BcoDI GTCTC 3 cut(s) 263, 815, 1163
BfrI CTTAAG 1 cut(s) 1202
BfuAI ACCTGC 1 cut(s) 910
BfuI GTATCC 1 cut(s) 1331
BglI GCCNNNNNGGC 1 cut(s) 1250
BlpI GCTNAGC 1 cut(s) 1584
Bme1390I CCNGG 2 cut(s) 228, 721
Bme18I GGWCC 3 cut(s) 147, 420, 1459
BmeRI GACNNNNNGTC 1 cut(s) 247
BmeT110I CYCGRG 3 cut(s) 578, 632, 1538
BmgT120I GGNCC 6 cut(s) 52, 53, 147, 296, 420, 1459
BmrFI CCNGG 2 cut(s) 228, 721
BmsI GCATC 2 cut(s) 1492, 1618
BpiI GAAGAC 1 cut(s) 190
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
BpmI CTGGAG 1 cut(s) 1482
Bpu10I CCTNAGC 1 cut(s) 849
Bpu1102I GCTNAGC 1 cut(s) 1584
Bpu14I TTCGAA 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 1049
BpuMI CCSGG 1 cut(s) 228
BsaHI GRCGYC 2 cut(s) 27, 192
BsaJI CCNNGG 6 cut(s) 226, 719, 1347, 1539, 1563, 1576
BsaWI WCCGGW 2 cut(s) 417, 544
BsaXI ACNNNNNCTCC 4 cut(s) 975, 1005, 1025, 1055
Bsc4I CCNNNNNNNGG 4 cut(s) 48, 293, 306, 346
Bse118I RCCGGY 2 cut(s) 417, 1621
Bse1I ACTGG 3 cut(s) 149, 403, 1254
Bse3DI GCAATG 1 cut(s) 836
BseAI TCCGGA 1 cut(s) 544
BseBI CCWGG 1 cut(s) 721
BseDI CCNNGG 6 cut(s) 226, 719, 1347, 1539, 1563, 1576
BseGI GGATG 5 cut(s) 185, 859, 940, 1294, 1549
BseLI CCNNNNNNNGG 4 cut(s) 48, 293, 306, 346
BseMI GCAATG 1 cut(s) 836
BseMII CTCAG 6 cut(s) 51, 474, 842, 1187, 1188, 1575
BseNI ACTGG 3 cut(s) 149, 403, 1254
BseRI GAGGAG 4 cut(s) 362, 551, 1001, 1046
BseSI GKGCMC 1 cut(s) 56
BseX3I CGGCCG 1 cut(s) 130
BseXI GCAGC 6 cut(s) 328, 331, 436, 877, 982, 1585
Bsh1236I CGCG 5 cut(s) 248, 283, 342, 369, 439
Bsh1285I CGRYCG 3 cut(s) 133, 592, 604
BshFI GGCC 7 cut(s) 54, 132, 297, 359, 374, 1253, 1575
BshNI GGYRCC 1 cut(s) 1492
BshTI ACCGGT 1 cut(s) 417
BsiEI CGRYCG 3 cut(s) 133, 592, 604
BsiHKAI GWGCWC 1 cut(s) 68
BsiHKCI CYCGRG 3 cut(s) 578, 632, 1538
BsiSI CCGG 6 cut(s) 133, 228, 418, 545, 551, 1622
BslFI GGGAC 2 cut(s) 14, 80
BslI CCNNNNNNNGG 4 cut(s) 48, 293, 306, 346
BsmAI GTCTC 3 cut(s) 263, 815, 1163
BsmBI CGTCTC 1 cut(s) 263
BsmFI GGGAC 2 cut(s) 14, 80
BsmI GAATGC 1 cut(s) 1117
BsnI GGCC 7 cut(s) 54, 132, 297, 359, 374, 1253, 1575
BsoBI CYCGRG 3 cut(s) 578, 632, 1538
Bsp119I TTCGAA 1 cut(s) 15
Bsp120I GGGCCC 1 cut(s) 52
Bsp1286I GDGCHC 3 cut(s) 56, 68, 391
Bsp13I TCCGGA 1 cut(s) 544
Bsp143I GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
Bsp1720I GCTNAGC 1 cut(s) 1584
BspANI GGCC 7 cut(s) 54, 132, 297, 359, 374, 1253, 1575
BspCNI CTCAG 6 cut(s) 52, 475, 841, 1186, 1189, 1576
BspEI TCCGGA 1 cut(s) 544
BspFNI CGCG 5 cut(s) 248, 283, 342, 369, 439
BspMI ACCTGC 1 cut(s) 910
BspPI GGATC 4 cut(s) 143, 499, 564, 1124
BspT104I TTCGAA 1 cut(s) 15
BspT107I GGYRCC 1 cut(s) 1492
BspTI CTTAAG 1 cut(s) 1202
BsrBI CCGCTC 3 cut(s) 117, 174, 637
BsrDI GCAATG 1 cut(s) 836
BsrFI RCCGGY 2 cut(s) 417, 1621
BsrI ACTGG 3 cut(s) 149, 403, 1254
BssAI RCCGGY 2 cut(s) 417, 1621
BssECI CCNNGG 6 cut(s) 226, 719, 1347, 1539, 1563, 1576
BssMI GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
BssNI GRCGYC 2 cut(s) 27, 192
BssSI CACGAG 2 cut(s) 818, 1299
BssT1I CCWWGG 2 cut(s) 1347, 1576
Bst2BI CACGAG 2 cut(s) 818, 1299
Bst2UI CCWGG 1 cut(s) 721
Bst4CI ACNGT 3 cut(s) 215, 676, 1385
Bst6I CTCTTC 1 cut(s) 569
BstACI GRCGYC 2 cut(s) 27, 192
BstAFI CTTAAG 1 cut(s) 1202
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 4 cut(s) 172, 387, 391, 1623
BstDEI CTNAG 7 cut(s) 60, 483, 828, 849, 1173, 1197, 1584
BstDSI CCRYGG 1 cut(s) 1563
BstF5I GGATG 5 cut(s) 185, 859, 940, 1294, 1549
BstFNI CGCG 5 cut(s) 248, 283, 342, 369, 439
BstHHI GCGC 5 cut(s) 285, 369, 441, 716, 1117
BstKTI GATC 7 cut(s) 138, 507, 559, 592, 604, 1132, 1306
BstMAI GTCTC 3 cut(s) 263, 815, 1163
BstMBI GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
BstMCI CGRYCG 3 cut(s) 133, 592, 604
BstNI CCWGG 1 cut(s) 721
BstNSI RCATGY 1 cut(s) 496
BstSCI CCNGG 2 cut(s) 226, 719
BstSLI GKGCMC 1 cut(s) 56
BstUI CGCG 5 cut(s) 248, 283, 342, 369, 439
BstV1I GCAGC 6 cut(s) 328, 331, 436, 877, 982, 1585
BstV2I GAAGAC 1 cut(s) 190
BstX2I RGATCY 2 cut(s) 504, 556
BstXI CCANNNNNNTGG 1 cut(s) 1222
BstYI RGATCY 2 cut(s) 504, 556
BstZI CGGCCG 1 cut(s) 130
BsuI GTATCC 1 cut(s) 1331
BsuRI GGCC 7 cut(s) 54, 132, 297, 359, 374, 1253, 1575
BtgI CCRYGG 1 cut(s) 1563
BtsCI GGATG 5 cut(s) 185, 859, 940, 1294, 1549
BtsI GCAGTG 1 cut(s) 1532
BtsIMutI CAGTG 2 cut(s) 1261, 1532
BveI ACCTGC 1 cut(s) 910
Cac8I GCNNGC 4 cut(s) 172, 387, 391, 1623
CfoI GCGC 5 cut(s) 285, 369, 441, 716, 1117
Cfr10I RCCGGY 2 cut(s) 417, 1621
Cfr13I GGNCC 6 cut(s) 52, 53, 147, 296, 420, 1459
CseI GACGC 4 cut(s) 16, 200, 237, 254
Csp6I GTAC 1 cut(s) 406
CspAI ACCGGT 1 cut(s) 417
CspCI CAANNNNNGTGG 4 cut(s) 467, 502, 661, 696
CviAII CATG 3 cut(s) 412, 493, 1316
CviQI GTAC 1 cut(s) 406
DdeI CTNAG 7 cut(s) 60, 483, 828, 849, 1173, 1197, 1584
DpnI GATC 7 cut(s) 137, 506, 558, 591, 603, 1131, 1305
DpnII GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
DrdI GACNNNNNNGTC 1 cut(s) 350
DriI GACNNNNNGTC 1 cut(s) 247
DseDI GACNNNNNNGTC 1 cut(s) 350
EaeI YGGCCR 2 cut(s) 130, 1251
EagI CGGCCG 1 cut(s) 130
Eam1104I CTCTTC 1 cut(s) 569
Eam1105I GACNNNNNGTC 1 cut(s) 247
EarI CTCTTC 1 cut(s) 569
EciI GGCGGA 2 cut(s) 223, 588
EclXI CGGCCG 1 cut(s) 130
Eco130I CCWWGG 2 cut(s) 1347, 1576
Eco24I GRGCYC 2 cut(s) 56, 391
Eco32I GATATC 2 cut(s) 475, 859
Eco47I GGWCC 3 cut(s) 147, 420, 1459
Eco52I CGGCCG 1 cut(s) 130
Eco57I CTGAAG 1 cut(s) 864
Eco88I CYCGRG 3 cut(s) 578, 632, 1538
EcoO109I RGGNCCY 2 cut(s) 52, 1459
EcoRII CCWGG 1 cut(s) 719
EcoRV GATATC 2 cut(s) 475, 859
EcoT14I CCWWGG 2 cut(s) 1347, 1576
EcoT38I GRGCYC 2 cut(s) 56, 391
ErhI CCWWGG 2 cut(s) 1347, 1576
Esp3I CGTCTC 1 cut(s) 263
FaeI CATG 3 cut(s) 415, 496, 1319
FaqI GGGAC 2 cut(s) 14, 80
FatI CATG 3 cut(s) 411, 492, 1315
FauI CCCGC 6 cut(s) 122, 158, 179, 285, 398, 444
FbaI TGATCA 1 cut(s) 1303
FokI GGATG 5 cut(s) 172, 866, 947, 1281, 1556
FriOI GRGCYC 2 cut(s) 56, 391
FspAI RTGCGCAY 1 cut(s) 715
FspI TGCGCA 1 cut(s) 715
GlaI GCGC 5 cut(s) 284, 368, 440, 715, 1116
GsuI CTGGAG 1 cut(s) 1482
HaeIII GGCC 7 cut(s) 54, 132, 297, 359, 374, 1253, 1575
HapII CCGG 6 cut(s) 133, 228, 418, 545, 551, 1622
HgaI GACGC 4 cut(s) 16, 200, 237, 254
HhaI GCGC 5 cut(s) 285, 369, 441, 716, 1117
Hin1I GRCGYC 2 cut(s) 27, 192
Hin1II CATG 3 cut(s) 415, 496, 1319
Hin6I GCGC 5 cut(s) 283, 367, 439, 714, 1115
HinP1I GCGC 5 cut(s) 283, 367, 439, 714, 1115
HindIII AAGCTT 1 cut(s) 1025
HinfI GANTC 7 cut(s) 218, 291, 576, 606, 703, 1171, 1482
HpaII CCGG 6 cut(s) 133, 228, 418, 545, 551, 1622
HphI GGTGA 3 cut(s) 227, 601, 1093
Hpy166II GTNNAC 3 cut(s) 730, 817, 1414
Hpy188I TCNGA 6 cut(s) 121, 190, 753, 906, 1092, 1176
Hpy188III TCNNGA 8 cut(s) 523, 545, 643, 700, 818, 830, 1301, 1499
Hpy8I GTNNAC 3 cut(s) 730, 817, 1414
Hpy99I CGWCG 8 cut(s) 47, 194, 248, 253, 266, 347, 473, 1468
HpyAV CCTTC 8 cut(s) 109, 118, 166, 373, 520, 974, 1011, 1565
HpyCH4III ACNGT 3 cut(s) 215, 676, 1385
HpyCH4IV ACGT 4 cut(s) 93, 426, 784, 1281
HpyCH4V TGCA 2 cut(s) 974, 1066
HpyF3I CTNAG 7 cut(s) 60, 483, 828, 849, 1173, 1197, 1584
HpySE526I ACGT 4 cut(s) 93, 426, 784, 1281
Hsp92I GRCGYC 2 cut(s) 27, 192
Hsp92II CATG 3 cut(s) 415, 496, 1319
HspAI GCGC 5 cut(s) 283, 367, 439, 714, 1115
Kpn2I TCCGGA 1 cut(s) 544
KroI GCCGGC 1 cut(s) 1621
KroNI GCCGGC 1 cut(s) 1623
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
LmnI GCTCC 7 cut(s) 122, 179, 236, 333, 382, 547, 832
Lsp1109I GCAGC 6 cut(s) 328, 331, 436, 877, 982, 1585
LweI GCATC 2 cut(s) 1492, 1618
MaeII ACGT 4 cut(s) 93, 426, 784, 1281
MaeIII GTNAC 3 cut(s) 395, 946, 1277
MalI GATC 7 cut(s) 137, 506, 558, 591, 603, 1131, 1305
MbiI CCGCTC 3 cut(s) 117, 174, 637
MboI GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
MboII GAAGA 4 cut(s) 190, 456, 556, 649
MfeI CAATTG 1 cut(s) 797
MflI RGATCY 2 cut(s) 504, 556
MhlI GDGCHC 3 cut(s) 56, 68, 391
MlsI TGGCCA 1 cut(s) 1253
MluCI AATT 5 cut(s) 79, 767, 797, 862, 1163
MluI ACGCGT 1 cut(s) 246
MluNI TGGCCA 1 cut(s) 1253
MlyI GAGTC 4 cut(s) 227, 570, 697, 1165
MmeI TCCRAC 4 cut(s) 213, 234, 447, 502
Mox20I TGGCCA 1 cut(s) 1253
MroI TCCGGA 1 cut(s) 544
MroNI GCCGGC 1 cut(s) 1621
MroXI GAANNNNTTC 1 cut(s) 656
MscI TGGCCA 1 cut(s) 1253
MseI TTAA 6 cut(s) 1119, 1203, 1311, 1368, 1430, 1455
MslI CAYNNNNRTG 1 cut(s) 1299
Msp20I TGGCCA 1 cut(s) 1253
MspCI CTTAAG 1 cut(s) 1202
MspI CCGG 6 cut(s) 133, 228, 418, 545, 551, 1622
MspR9I CCNGG 2 cut(s) 228, 721
MunI CAATTG 1 cut(s) 797
Mva1269I GAATGC 1 cut(s) 1117
MvaI CCWGG 1 cut(s) 721
MvnI CGCG 5 cut(s) 248, 283, 342, 369, 439
NaeI GCCGGC 1 cut(s) 1623
NciI CCSGG 1 cut(s) 228
NdeII GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
NgoMIV GCCGGC 1 cut(s) 1621
NlaIII CATG 3 cut(s) 415, 496, 1319
NmeAIII GCCGAG 3 cut(s) 108, 400, 467
NmuCI GTSAC 2 cut(s) 395, 946
NsbI TGCGCA 1 cut(s) 715
NspI RCATGY 1 cut(s) 496
NspV TTCGAA 1 cut(s) 15
PaeR7I CTCGAG 2 cut(s) 578, 632
PcsI WCGNNNNNNNCGW 5 cut(s) 12, 198, 351, 530, 585
PctI GAATGC 1 cut(s) 1117
PdiI GCCGGC 1 cut(s) 1623
PdmI GAANNNNTTC 1 cut(s) 656
PfeI GAWTC 3 cut(s) 291, 606, 1482
PflFI GACNNNGTC 1 cut(s) 194
PinAI ACCGGT 1 cut(s) 417
Ple19I CGATCG 2 cut(s) 592, 604
PleI GAGTC 4 cut(s) 226, 570, 697, 1165
PpsI GAGTC 4 cut(s) 226, 570, 697, 1165
PpuMI RGGWCCY 1 cut(s) 1459
PshBI ATTAAT 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 1459
Psp6I CCWGG 1 cut(s) 719
PspGI CCWGG 1 cut(s) 719
PspOMI GGGCCC 1 cut(s) 52
PspPI GGNCC 6 cut(s) 52, 53, 147, 296, 420, 1459
PspPPI RGGWCCY 1 cut(s) 1459
PspXI VCTCGAGB 2 cut(s) 578, 632
PsuI RGATCY 2 cut(s) 504, 556
PsyI GACNNNGTC 1 cut(s) 194
PvuI CGATCG 2 cut(s) 592, 604
RsaI GTAC 1 cut(s) 407
RsaNI GTAC 1 cut(s) 406
RseI CAYNNNNRTG 1 cut(s) 1299
SaqAI TTAA 6 cut(s) 1119, 1203, 1311, 1368, 1430, 1455
Sau3AI GATC 7 cut(s) 135, 504, 556, 589, 601, 1129, 1303
Sau96I GGNCC 6 cut(s) 52, 53, 147, 296, 420, 1459
SchI GAGTC 4 cut(s) 227, 570, 697, 1165
ScrFI CCNGG 2 cut(s) 228, 721
SduI GDGCHC 3 cut(s) 56, 68, 391
SfaNI GCATC 2 cut(s) 1492, 1618
Sfr274I CTCGAG 2 cut(s) 578, 632
SfuI TTCGAA 1 cut(s) 15
SinI GGWCC 3 cut(s) 147, 420, 1459
SlaI CTCGAG 2 cut(s) 578, 632
SmiMI CAYNNNNRTG 1 cut(s) 1299
SmlI CTYRAG 4 cut(s) 578, 632, 1028, 1202
SmoI CTYRAG 4 cut(s) 578, 632, 1028, 1202
Sse9I AATT 5 cut(s) 79, 767, 797, 862, 1163
StyD4I CCNGG 2 cut(s) 226, 719
StyI CCWWGG 2 cut(s) 1347, 1576
TaaI ACNGT 3 cut(s) 215, 676, 1385
TaiI ACGT 4 cut(s) 96, 429, 787, 1284
TasI AATT 5 cut(s) 79, 767, 797, 862, 1163
TatI WGTACW 1 cut(s) 405
TauI GCSGC 6 cut(s) 27, 283, 342, 573, 631, 1640
TfiI GAWTC 3 cut(s) 291, 606, 1482
Tru1I TTAA 6 cut(s) 1119, 1203, 1311, 1368, 1430, 1455
Tru9I TTAA 6 cut(s) 1119, 1203, 1311, 1368, 1430, 1455
TscAI CASTG 2 cut(s) 1261, 1539
TseFI GTSAC 2 cut(s) 395, 946
TseI GCWGC 6 cut(s) 316, 319, 449, 890, 995, 1598
Tsp45I GTSAC 2 cut(s) 395, 946
TspDTI ATGAA 4 cut(s) 428, 1283, 1283, 1439
TspGWI ACGGA 3 cut(s) 245, 457, 1580
TspRI CASTG 2 cut(s) 1261, 1539
Tth111I GACNNNGTC 1 cut(s) 194
Vha464I CTTAAG 1 cut(s) 1202
VpaK11BI GGWCC 3 cut(s) 147, 420, 1459
VspI ATTAAT 1 cut(s) 1368
XceI RCATGY 1 cut(s) 496
XhoI CTCGAG 2 cut(s) 578, 632
XmnI GAANNNNTTC 1 cut(s) 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.