Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0011028

Physical Location & Seq

Genomic Coordinates Forward (+)

26493419 .. 26496791

Gene Structure 3373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGAGGACGACGACGAAGACGAAATCACGCAGGAGGACGCGTGGGCCGTCATCTCCGCCTACTTCGAGGAGAAGGGCTTGGTGCGCCAGCAGCTCGACTCGTTCGACGAGTTCATTCAGAACACAATGCAGGAGATTGTCGACGAGTCTGCGGATATTGAGATTCGGCCTGAGTCGCAGCACAACCCGGGGCACCAGCCCGATTTCGCCGAGACTGTATGCAAGATTAGCTTTGGTCAGATTTATTTGAGTAAGCCCATGATGACCGAATCTGATGGAGAAACTGCAACCTTATTTCCCAAAGCTGCAAGGCTGAGAAATCTGACGTACTCAGCACCCTTGTATGTGGATGTCTCAAAGAGGATGATAAAGAAAGGACACGATGGCGAAGAACTCACCGAGACCCAGGATTTCACCAAAGTATTCATTGGGAAGGTTCCTATAATGCTTCGGTCTAGTTATTGCACACTGTACCAGAATTCAGAGAAAGATTTAACTGAGCTGGGAGAGTGTCCATACGATCAAGGTGGATATTTTATTATAAATGGGAGTGAAAAGGTTCTTATTGCTCAAGAGAAGATGAGTACCAATCATGTCTATGTGTTCAAGAAGAGGCAGCCGAACAAGTACGCCTATGTGGCTGAAGTTCGGTCTATGGCGGAGTCTCAAAACAGGCCGCCCAGTACCATGTTTGTTCGGATGCTTGCCCGGACTAGTTCTAAAGGGGGTTCTTCGGGACAGTATATCAAAGCTACACTTCCTTATATTAAAGGGGAAATTCCTATTATTATCGTTTTCCGGGCTCTTGGGTTTGTTGCCGATAAAGACATCCTCGAGCACATATGTTATGACTTTTCTGATACTCAAATGATGGAGTTGCTCAGACCTTCTTTGGAAGAAGCATTTGTGATTCAGAATCAACAGGTTGCACTAGATTATATTGGAAAGAGAGGTGCAAATGTTGGTGTGAGTAGAGACAAGAGAATCAAGTATGCGAAAGAGATTCTACAAAAGGAAATGCTTCCACACGTTGGTGTTGGAGAATTTTGTGAGACAAAGAAAGCTTACTATTTTGGATATATCGTTCACAGGCTTCTACTCTGTGCACTTGGTCGGAGGCCAGAGGATGACAGGGATCATTATGGTAACAAGCGGCTTGATCTTGCTGGTCCCTTACTTGGAGGCTTGTTTAGAAATCTATTCAGGAAGTTGACTAAGGATGTGAGAGCTTATGCACAGAAGTGTGTTGACAATGGAAAGGATCTTAATCTGCAATTTGCCATCAAAGCTAAAACCATCACGAGTGGCCTCAAATATTCACTTGCCACTGGAAACTGGGGACAAGCAAATGCAGCTGGTACAAGGGCTGGCGTGTCGCAGGTGTTAAATCGTTTGACATACGCATCCACCCTCTCACACTTGAGAAGACTGAATTCTCCAATAGGGCGTGAAGGGAAATTGGCTAAACCACGTCAGCTGCATAATTCGCAATGGGGAATGATGTGCCCAGCTGAAACACCCGAAGGCCAAGTGAGCGTGCGGGCTTGTCAAGAATCTTGCATTGATGGTATACATAACGGTAGGATCGATCTGCATATCCAATCTTGGAATTTTTGGAAGAATGGGGTACAGAAAACTTTGAGGAAATTTCTCCTGCGGTTATACCCCAAGCTACAAAAATTTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0016591 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019222 GO:0019438 GO:0030054 GO:0030880 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034654 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

563

Amino Acids

63.86

Weight (kDa)

8.57

Isoelectric Point (pI)

44.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNA_pol_Rpb2_1	PF04563	26 - 435	4.6e-78	RNA polymerase beta subunit
RNA_pol_Rpb2_2	PF04561	196 - 387	2.6e-54	RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_3	PF04565	460 - 510	2.8e-17	RNA polymerase Rpb2, domain 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21710
fragaria_vesca	FvH4_3g09270
malus_domestica	MD05G1313100.v1.1 MD10G1295300.v1.1
prunus_persica	Prupe.4G046700_v2.0.a1
pyrus_communis	pycom05g29100 pycom05g29110 pycom10g24710 pycom10g24720
rosa_chinensis	RchiOBHm_Chr5g0008301
rosa_laevigata	RLG00000031560
rosa_multiflora	Rmu_sc0021840.1_g000003
rosa_roxburghii	Rroxscaffold_1G00068160
rosa_rugosa	Rorug04G0434800
rosa_samantha	Rh5AG063600 Rh5BG060100 Rh5CG070400 Rh5CG070500 Rh5DG059600
rosa_wichuraiana	Rw5G005730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	542
AarI	CACCTGC	1 cut(s)	1369
Acc36I	ACCTGC	1 cut(s)	1369
AccB1I	GGYRCC	1 cut(s)	192
AccB7I	CCANNNNNTGG	1 cut(s)	1031
AccI	GTMKAC	2 cut(s)	141, 1570
AccII	CGCG	1 cut(s)	41
AciI	CCGC	7 cut(s)	57, 152, 659, 677, 1153, 1540, 1657
AclWI	GGATC	3 cut(s)	1143, 1269, 1592
AcsI	RAATTY	7 cut(s)	478, 777, 1043, 1432, 1609, 1646, 1679
AcuI	CTGAAG	1 cut(s)	663
AfaI	GTAC	7 cut(s)	329, 473, 586, 629, 685, 1360, 1629
AfiI	CCNNNNNNNGG	2 cut(s)	1031, 1178
AflIII	ACRYGT	2 cut(s)	39, 1027
AgsI	TTSAA	1 cut(s)	607
AhlI	ACTAGT	1 cut(s)	713
AjiI	CACGTC	1 cut(s)	1472
AjnI	CCWGG	1 cut(s)	405
AleI	CACNNNNGTG	2 cut(s)	1032, 1240
AloI	GAACNNNNNNTCC	2 cut(s)	1068, 1100
Alw21I	GWGCWC	2 cut(s)	840, 1108
Alw26I	GTCTC	6 cut(s)	206, 358, 395, 669, 969, 1046
Alw44I	GTGCAC	1 cut(s)	1104
AlwI	GGATC	3 cut(s)	1143, 1269, 1592
Ama87I	CYCGRG	2 cut(s)	187, 833
AoxI	GGCC	6 cut(s)	45, 167, 674, 1118, 1306, 1525
ApaLI	GTGCAC	1 cut(s)	1104
ApeKI	GCWGC	6 cut(s)	91, 178, 305, 616, 1352, 1477
ApoI	RAATTY	7 cut(s)	478, 777, 1043, 1432, 1609, 1646, 1679
Asp700I	GAANNNNTTC	2 cut(s)	558, 1020
AspLEI	GCGC	1 cut(s)	87
AspS9I	GGNCC	2 cut(s)	45, 1169
AsuC2I	CCSGG	4 cut(s)	188, 189, 709, 800
AsuHPI	GGTGA	2 cut(s)	388, 406
AvaI	CYCGRG	2 cut(s)	187, 833
AvaII	GGWCC	1 cut(s)	1169
BaeGI	GKGCMC	3 cut(s)	195, 1108, 1508
BanI	GGYRCC	1 cut(s)	192
BanII	GRGCYC	1 cut(s)	805
BauI	CACGAG	1 cut(s)	1300
BbsI	GAAGAC	2 cut(s)	24, 1432
Bbv12I	GWGCWC	2 cut(s)	840, 1108
BbvI	GCAGC	6 cut(s)	103, 190, 292, 628, 1364, 1464
BccI	CCATC	6 cut(s)	269, 377, 865, 1289, 1304, 1559
BceAI	ACGGC	1 cut(s)	32
BcgI	CGANNNNNNTGC	2 cut(s)	131, 165
BciT130I	CCWGG	1 cut(s)	407
BcnI	CCSGG	4 cut(s)	188, 189, 709, 800
BcoDI	GTCTC	6 cut(s)	206, 358, 395, 669, 969, 1046
BcuI	ACTAGT	1 cut(s)	713
BfaI	CTAG	3 cut(s)	456, 714, 932
BfuAI	ACCTGC	1 cut(s)	1369
BglI	GCCNNNNNGGC	1 cut(s)	638
BisI	GCNGC	8 cut(s)	92, 179, 306, 617, 677, 1154, 1353, 1478
BlsI	GCNGC	8 cut(s)	93, 180, 307, 618, 678, 1155, 1354, 1479
Bme1390I	CCNGG	5 cut(s)	188, 189, 407, 709, 800
Bme18I	GGWCC	1 cut(s)	1169
BmeT110I	CYCGRG	2 cut(s)	187, 833
BmgBI	CACGTC	1 cut(s)	1472
BmgT120I	GGNCC	2 cut(s)	45, 1169
BmiI	GGNNCC	3 cut(s)	194, 438, 1171
BmrFI	CCNGG	5 cut(s)	188, 189, 407, 709, 800
BmrI	ACTGGG	2 cut(s)	675, 1345
BmsI	GCATC	2 cut(s)	690, 1412
BmuI	ACTGGG	2 cut(s)	675, 1345
BpiI	GAAGAC	2 cut(s)	24, 1432
BpuEI	CTTGAG	2 cut(s)	555, 1441
BpuMI	CCSGG	4 cut(s)	188, 189, 709, 800
Bsa29I	ATCGAT	1 cut(s)	1587
BsaBI	GATNNNNATC	1 cut(s)	1266
BsaI	GGTCTC	1 cut(s)	395
BsaJI	CCNNGG	3 cut(s)	187, 188, 405
BsaXI	ACNNNNNCTCC	2 cut(s)	26, 56
Bsc4I	CCNNNNNNNGG	2 cut(s)	1031, 1178
Bse1I	ACTGG	3 cut(s)	681, 1333, 1340
Bse3DI	GCAATG	1 cut(s)	1496
Bse8I	GATNNNNATC	1 cut(s)	1266
BseBI	CCWGG	1 cut(s)	407
BseCI	ATCGAT	1 cut(s)	1587
BseDI	CCNNGG	3 cut(s)	187, 188, 405
BseGI	GGATG	7 cut(s)	355, 369, 705, 828, 1132, 1225, 1403
BseJI	GATNNNNATC	1 cut(s)	1266
BseLI	CCNNNNNNNGG	2 cut(s)	1031, 1178
BseMI	GCAATG	1 cut(s)	1496
BseMII	CTCAG	5 cut(s)	162, 305, 345, 489, 895
BseNI	ACTGG	3 cut(s)	681, 1333, 1340
BseRI	GAGGAG	1 cut(s)	83
BseSI	GKGCMC	3 cut(s)	195, 1108, 1508
BseXI	GCAGC	6 cut(s)	103, 190, 292, 628, 1364, 1464
BseYI	CCCAGC	2 cut(s)	502, 1507
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	6 cut(s)	47, 169, 676, 1120, 1308, 1527
BshNI	GGYRCC	1 cut(s)	192
BshVI	ATCGAT	1 cut(s)	1587
BsiHKAI	GWGCWC	2 cut(s)	840, 1108
BsiHKCI	CYCGRG	2 cut(s)	187, 833
BsiSI	CCGG	3 cut(s)	188, 709, 799
BslFI	GGGAC	3 cut(s)	750, 1155, 1353
BslI	CCNNNNNNNGG	2 cut(s)	1031, 1178
BsmAI	GTCTC	6 cut(s)	206, 358, 395, 669, 969, 1046
BsmFI	GGGAC	3 cut(s)	750, 1155, 1353
BsnI	GGCC	6 cut(s)	47, 169, 676, 1120, 1308, 1527
Bso31I	GGTCTC	1 cut(s)	395
BsoBI	CYCGRG	2 cut(s)	187, 833
Bsp1286I	GDGCHC	5 cut(s)	195, 805, 840, 1108, 1508
Bsp143I	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
BspACI	CCGC	7 cut(s)	57, 152, 659, 677, 1153, 1540, 1657
BspANI	GGCC	6 cut(s)	47, 169, 676, 1120, 1308, 1527
BspCNI	CTCAG	5 cut(s)	163, 306, 344, 490, 894
BspDI	ATCGAT	1 cut(s)	1587
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	3 cut(s)	194, 438, 1171
BspMI	ACCTGC	1 cut(s)	1369
BspPI	GGATC	3 cut(s)	1143, 1269, 1592
BspT107I	GGYRCC	1 cut(s)	192
BspTNI	GGTCTC	1 cut(s)	395
BsrDI	GCAATG	1 cut(s)	1496
BsrI	ACTGG	3 cut(s)	681, 1333, 1340
BssECI	CCNNGG	3 cut(s)	187, 188, 405
BssMI	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
BssNAI	GTATAC	1 cut(s)	1571
BssSI	CACGAG	1 cut(s)	1300
Bst1107I	GTATAC	1 cut(s)	1571
Bst2BI	CACGAG	1 cut(s)	1300
Bst2UI	CCWGG	1 cut(s)	407
Bst4CI	ACNGT	4 cut(s)	217, 471, 741, 1580
Bst6I	CTCTTC	1 cut(s)	605
BstC8I	GCNNGC	5 cut(s)	89, 705, 1369, 1538, 1542
BstDEI	CTNAG	6 cut(s)	171, 314, 331, 498, 881, 1215
BstF5I	GGATG	7 cut(s)	355, 369, 705, 828, 1132, 1225, 1403
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	87
BstKTI	GATC	6 cut(s)	523, 1138, 1162, 1264, 1587, 1591
BstMAI	GTCTC	6 cut(s)	206, 358, 395, 669, 969, 1046
BstMBI	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
BstMWI	GCNNNNNNNGC	9 cut(s)	84, 91, 175, 228, 638, 1286, 1352, 1486, 1533
BstNI	CCWGG	1 cut(s)	407
BstSCI	CCNGG	5 cut(s)	186, 187, 405, 707, 798
BstSLI	GKGCMC	3 cut(s)	195, 1108, 1508
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	6 cut(s)	103, 190, 292, 628, 1364, 1464
BstV2I	GAAGAC	2 cut(s)	24, 1432
BstX2I	RGATCY	1 cut(s)	1261
BstYI	RGATCY	1 cut(s)	1261
BstZ17I	GTATAC	1 cut(s)	1571
Bsu15I	ATCGAT	1 cut(s)	1587
BsuRI	GGCC	6 cut(s)	47, 169, 676, 1120, 1308, 1527
BsuTUI	ATCGAT	1 cut(s)	1587
BtrI	CACGTC	1 cut(s)	1472
BtsCI	GGATG	7 cut(s)	355, 369, 705, 828, 1132, 1225, 1403
BtsIMutI	CAGTG	2 cut(s)	467, 1326
BveI	ACCTGC	1 cut(s)	1369
Cac8I	GCNNGC	5 cut(s)	89, 705, 1369, 1538, 1542
CfoI	GCGC	1 cut(s)	87
Cfr13I	GGNCC	2 cut(s)	45, 1169
Cfr9I	CCCGGG	1 cut(s)	187
ClaI	ATCGAT	1 cut(s)	1587
CseI	GACGC	1 cut(s)	47
Csp6I	GTAC	7 cut(s)	328, 472, 585, 628, 684, 1359, 1628
CviAII	CATG	3 cut(s)	259, 593, 688
CviQI	GTAC	7 cut(s)	328, 472, 585, 628, 684, 1359, 1628
DdeI	CTNAG	6 cut(s)	171, 314, 331, 498, 881, 1215
DpnI	GATC	6 cut(s)	522, 1137, 1161, 1263, 1586, 1590
DpnII	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
Eam1104I	CTCTTC	1 cut(s)	605
EarI	CTCTTC	1 cut(s)	605
EciI	GGCGGA	2 cut(s)	46, 674
Eco24I	GRGCYC	1 cut(s)	805
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	1 cut(s)	1169
Eco57I	CTGAAG	1 cut(s)	663
Eco88I	CYCGRG	2 cut(s)	187, 833
EcoRI	GAATTC	2 cut(s)	478, 1432
EcoRII	CCWGG	1 cut(s)	405
EcoT38I	GRGCYC	1 cut(s)	805
FaeI	CATG	3 cut(s)	262, 596, 691
FalI	AAGNNNNNCTT	4 cut(s)	215, 247, 741, 773
FaqI	GGGAC	3 cut(s)	750, 1155, 1353
FatI	CATG	3 cut(s)	258, 592, 687
FauI	CCCGC	1 cut(s)	1533
FauNDI	CATATG	1 cut(s)	842
FblI	GTMKAC	2 cut(s)	141, 1570
Fnu4HI	GCNGC	8 cut(s)	92, 179, 306, 617, 677, 1154, 1353, 1478
FokI	GGATG	7 cut(s)	362, 376, 712, 815, 1139, 1232, 1390
FriOI	GRGCYC	1 cut(s)	805
Fsp4HI	GCNGC	8 cut(s)	92, 179, 306, 617, 677, 1154, 1353, 1478
FspBI	CTAG	3 cut(s)	456, 714, 932
GlaI	GCGC	1 cut(s)	86
GluI	GCNGC	8 cut(s)	92, 179, 306, 617, 677, 1154, 1353, 1478
GsaI	CCCAGC	2 cut(s)	506, 1511
HaeIII	GGCC	6 cut(s)	47, 169, 676, 1120, 1308, 1527
HapII	CCGG	3 cut(s)	188, 709, 799
HgaI	GACGC	1 cut(s)	47
HhaI	GCGC	1 cut(s)	87
Hin1II	CATG	3 cut(s)	262, 596, 691
Hin6I	GCGC	1 cut(s)	85
HinP1I	GCGC	1 cut(s)	85
HincII	GTYRAC	3 cut(s)	142, 1212, 1249
HindII	GTYRAC	3 cut(s)	142, 1212, 1249
HindIII	AAGCTT	1 cut(s)	1062
HpaII	CCGG	3 cut(s)	188, 709, 799
HphI	GGTGA	2 cut(s)	388, 406
Hpy166II	GTNNAC	6 cut(s)	142, 1087, 1106, 1212, 1249, 1571
Hpy188III	TCNNGA	6 cut(s)	572, 607, 735, 1204, 1300, 1550
Hpy8I	GTNNAC	6 cut(s)	142, 1087, 1106, 1212, 1249, 1571
Hpy99I	CGWCG	4 cut(s)	14, 17, 110, 146
HpyAV	CCTTC	5 cut(s)	67, 427, 897, 1445, 1517
HpyCH4III	ACNGT	4 cut(s)	217, 471, 741, 1580
HpyCH4IV	ACGT	3 cut(s)	326, 1029, 1471
HpyF10VI	GCNNNNNNNGC	9 cut(s)	84, 91, 175, 228, 638, 1286, 1352, 1486, 1533
HpyF3I	CTNAG	6 cut(s)	171, 314, 331, 498, 881, 1215
HpySE526I	ACGT	3 cut(s)	326, 1029, 1471
Hsp92II	CATG	3 cut(s)	262, 596, 691
HspAI	GCGC	1 cut(s)	85
Kzo9I	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
Lsp1109I	GCAGC	6 cut(s)	103, 190, 292, 628, 1364, 1464
LweI	GCATC	2 cut(s)	690, 1412
MaeI	CTAG	3 cut(s)	456, 714, 932
MaeII	ACGT	3 cut(s)	326, 1029, 1471
MaeIII	GTNAC	1 cut(s)	1145
MalI	GATC	6 cut(s)	522, 1137, 1161, 1263, 1586, 1590
MboI	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
MboII	GAAGA	8 cut(s)	29, 401, 589, 622, 723, 908, 1437, 1630
MflI	RGATCY	1 cut(s)	1261
MhlI	GDGCHC	5 cut(s)	195, 805, 840, 1108, 1508
MluI	ACGCGT	1 cut(s)	39
MlyI	GAGTC	4 cut(s)	92, 155, 182, 671
MmeI	TCCRAC	2 cut(s)	1018, 1094
MroXI	GAANNNNTTC	2 cut(s)	558, 1020
MseI	TTAA	4 cut(s)	494, 768, 1266, 1385
MslI	CAYNNNNRTG	3 cut(s)	597, 1032, 1240
MspA1I	CMGCKG	3 cut(s)	1355, 1477, 1511
MspI	CCGG	3 cut(s)	188, 709, 799
MspR9I	CCNGG	5 cut(s)	188, 189, 407, 709, 800
MvaI	CCWGG	1 cut(s)	407
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	9 cut(s)	84, 91, 175, 228, 638, 1286, 1352, 1486, 1533
NciI	CCSGG	4 cut(s)	188, 189, 709, 800
NdeI	CATATG	1 cut(s)	842
NdeII	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
NlaIII	CATG	3 cut(s)	262, 596, 691
NlaIV	GGNNCC	3 cut(s)	194, 438, 1171
NmeAIII	GCCGAG	1 cut(s)	235
OliI	CACNNNNGTG	2 cut(s)	1032, 1240
PaeR7I	CTCGAG	1 cut(s)	833
PaqCI	CACCTGC	1 cut(s)	1369
PcsI	WCGNNNNNNNCGW	4 cut(s)	18, 45, 102, 1584
PdmI	GAANNNNTTC	2 cut(s)	558, 1020
PfeI	GAWTC	7 cut(s)	163, 269, 910, 916, 984, 1003, 1553
PflMI	CCANNNNNTGG	1 cut(s)	1031
PkrI	GCNGC	8 cut(s)	93, 180, 307, 618, 678, 1155, 1354, 1479
PleI	GAGTC	4 cut(s)	92, 154, 181, 670
PpsI	GAGTC	4 cut(s)	92, 154, 181, 670
PsiI	TTATAA	1 cut(s)	542
Psp6I	CCWGG	1 cut(s)	405
PspFI	CCCAGC	2 cut(s)	502, 1507
PspGI	CCWGG	1 cut(s)	405
PspN4I	GGNNCC	3 cut(s)	194, 438, 1171
PspPI	GGNCC	2 cut(s)	45, 1169
PspXI	VCTCGAGB	1 cut(s)	833
PsuI	RGATCY	1 cut(s)	1261
PvuII	CAGCTG	3 cut(s)	1355, 1477, 1511
RsaI	GTAC	7 cut(s)	329, 473, 586, 629, 685, 1360, 1629
RsaNI	GTAC	7 cut(s)	328, 472, 585, 628, 684, 1359, 1628
RseI	CAYNNNNRTG	3 cut(s)	597, 1032, 1240
SalI	GTCGAC	1 cut(s)	140
SaqAI	TTAA	4 cut(s)	494, 768, 1266, 1385
SatI	GCNGC	8 cut(s)	92, 179, 306, 617, 677, 1154, 1353, 1478
Sau3AI	GATC	6 cut(s)	520, 1135, 1159, 1261, 1584, 1588
Sau96I	GGNCC	2 cut(s)	45, 1169
SchI	GAGTC	4 cut(s)	92, 155, 182, 671
ScrFI	CCNGG	5 cut(s)	188, 189, 407, 709, 800
SduI	GDGCHC	5 cut(s)	195, 805, 840, 1108, 1508
SfaNI	GCATC	2 cut(s)	690, 1412
Sfr274I	CTCGAG	1 cut(s)	833
SinI	GGWCC	1 cut(s)	1169
SlaI	CTCGAG	1 cut(s)	833
SmaI	CCCGGG	1 cut(s)	189
SmiMI	CAYNNNNRTG	3 cut(s)	597, 1032, 1240
SmlI	CTYRAG	3 cut(s)	570, 833, 1420
SmoI	CTYRAG	3 cut(s)	570, 833, 1420
SpeI	ACTAGT	1 cut(s)	713
SsiI	CCGC	7 cut(s)	57, 152, 659, 677, 1153, 1540, 1657
SspI	AATATT	1 cut(s)	1316
SspMI	CTAG	3 cut(s)	456, 714, 932
StyD4I	CCNGG	5 cut(s)	186, 187, 405, 707, 798
TaaI	ACNGT	4 cut(s)	217, 471, 741, 1580
TaiI	ACGT	3 cut(s)	329, 1032, 1474
TaqI	TCGA	6 cut(s)	66, 96, 105, 141, 834, 1587
TaqII	GACCGA	3 cut(s)	281, 441, 639
TauI	GCSGC	2 cut(s)	679, 1156
TfiI	GAWTC	7 cut(s)	163, 269, 910, 916, 984, 1003, 1553
Tru1I	TTAA	4 cut(s)	494, 768, 1266, 1385
Tru9I	TTAA	4 cut(s)	494, 768, 1266, 1385
TscAI	CASTG	2 cut(s)	474, 1333
TseI	GCWGC	6 cut(s)	91, 178, 305, 616, 1352, 1477
TspDTI	ATGAA	2 cut(s)	103, 415
TspMI	CCCGGG	1 cut(s)	187
TspRI	CASTG	2 cut(s)	474, 1333
Van91I	CCANNNNNTGG	1 cut(s)	1031
VneI	GTGCAC	1 cut(s)	1104
VpaK11BI	GGWCC	1 cut(s)	1169
XapI	RAATTY	7 cut(s)	478, 777, 1043, 1432, 1609, 1646, 1679
XhoI	CTCGAG	1 cut(s)	833
XmaI	CCCGGG	1 cut(s)	187
XmiI	GTMKAC	2 cut(s)	141, 1570
XmnI	GAANNNNTTC	2 cut(s)	558, 1020
XspI	CTAG	3 cut(s)	456, 714, 932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.