Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0011028

Physical Location & Seq

Genomic Coordinates Forward (+)

26497484 .. 26499964

Gene Structure 2481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g24720.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTTAGTCCAAGCAAGACTCAATCCTGAGGAGGCATATTCGGACACTTATACACATTGTGAAATCCACCCATCACTTATTTTGGGTGTTTGTGCTTCTATTATACCATTTCCTGATCATAATCAGTCTCCACGTAATACGTATCAATCTGCTATGGGGAAGCAAGCTATGGGGATTTACGTCACCAATTATCAGTTCCGGATGGATACATTGGCGTATGTTTTATACTACCCTCAGAAACCGCTTGTCACCACACGAGCCATGGAGCATCTCCACTTCCGGCAGCTTCCCGCTGGCATCAATGCTATTGTTGCCATTTCTTGTTATTCCGGTTATAACCAGGAAGATTCTGTCATTATGAATCAATCCTCTGTGGACCGTGGATTCTTCCGGTCACTATTCTATCGATCTTATAGGGACGAGGAGAAAAAGATGGGGACCCTTGTCAAAGAGGATTTTGGGCGTCCTGACAGAGCAAATACTATGGGTATGCGACATGGTTCTTATGACAAATTGGATGATGATGGTCTTGCTCCTCCTGGAACTAGGGTTTCAGGTGAGGATGTCATCATAGGAAAGACCACACCCATGGCTCAGGACGAGGCTCCAGGGCAAGCGAGTTCACGTTACACGCGGCGTGACCACAGCATAAGCTTGCGCCACAGTGAAACCGGCATAGTTGATCAGGTTCTACTGACGACCAATGCCGATGGGTTGCGGTTTGTCAAAGTAAGGGTGAGGTCTGTCAGAATACCACAGATTGGTGACAAATTCAGTAGCAGACATGGACAGAAAGGGACAGTGGGCATGACTTATACGCAGGAAGACATGCCATGGACTGTGGAAGGGGTCACACCCGATATAATCGTGAACCCACACGCTATTCCGTCTCGCATGACAATTGGTCAGCTGATCGAGTGTATCATGGGGAAGGTTGCAGCTCACATGGGAAAGGAAGGAGATGCTACTCCTTTTACAGATGTGACGGTGGACAATATCAGTAAAGCTCTTCACAGTTGTGGTTATCAAATGCGTGGATTCGAGACCATGTATAATGGTCACACGGGCAGGCGGCTCAGTGCTATGATATTCCTTGGCCCCACATATTACCAAAGACTGAAGCACATGGTCGACGACAAGATCCATTCACGTGGACGGGGCCCAGTGCAGATCCTCACAAGGCAGCCTGCTGAGGGACGGTCTCGTGATGGTGGTCTACGATTTGGAGAAATGGAACGAGATTGCATGATTGCCCATGGTGCTGCTCACTTTCTGAAAGAAAGATTGTTCGACCAGAGTGATGCATATAGGGTTCATGTCTGCGAGCGTTGTGGGTTAATAGCTATTGCAAATCTCAAGAAGAATTCGTTTGAGTGCAGGGGTTGCAAGAACAAAACTGACATTGTTCAGGTTTACATTCCTTATGCCTGCAAGCTGCTATTCCAAGAGCTCATGTCGATGGCCATAGCGCCAAGAATGCTCACAAAGGACATAAAGCCGGCCAAAAACCAAAAGAAGAAAGGAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0016591 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019222 GO:0019438 GO:0030054 GO:0030880 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034654 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

510

Amino Acids

57.26

Weight (kDa)

9.06

Isoelectric Point (pI)

35.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21710
fragaria_vesca	FvH4_3g09270
malus_domestica	MD05G1313100.v1.1 MD10G1295300.v1.1
prunus_persica	Prupe.4G046700_v2.0.a1
pyrus_communis	pycom05g29100 pycom05g29110 pycom10g24710 pycom10g24720
rosa_chinensis	RchiOBHm_Chr5g0008301
rosa_laevigata	RLG00000031560
rosa_multiflora	Rmu_sc0021840.1_g000003
rosa_roxburghii	Rroxscaffold_1G00068160
rosa_rugosa	Rorug04G0434800
rosa_samantha	Rh5AG063600 Rh5BG060100 Rh5CG070400 Rh5CG070500 Rh5DG059600
rosa_wichuraiana	Rw5G005730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	2 cut(s)	1131, 1216
AccII	CGCG	1 cut(s)	634
AccIII	TCCGGA	1 cut(s)	198
AciI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
AclWI	GGATC	2 cut(s)	1135, 1165
AcoI	YGGCCR	2 cut(s)	1461, 1500
AcsI	RAATTY	2 cut(s)	770, 1363
AcuI	CTGAAG	1 cut(s)	1139
AcvI	CACGTG	1 cut(s)	1151
AcyI	GRCGYC	1 cut(s)	463
AdeI	CACNNNGTG	1 cut(s)	59
AfiI	CCNNNNNNNGG	2 cut(s)	761, 1193
AhdI	GACNNNNNGTC	1 cut(s)	903
AjnI	CCWGG	3 cut(s)	339, 538, 607
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AleI	CACNNNNGTG	1 cut(s)	1017
AluBI	AGCT	9 cut(s)	167, 286, 654, 910, 941, 1007, 1343, 1435, 1450
AluI	AGCT	9 cut(s)	167, 286, 654, 910, 941, 1007, 1343, 1435, 1450
Alw21I	GWGCWC	1 cut(s)	1452
Alw26I	GTCTC	4 cut(s)	132, 894, 1037, 1206
AlwI	GGATC	2 cut(s)	1135, 1165
Aor13HI	TCCGGA	1 cut(s)	198
AoxI	GGCC	4 cut(s)	1096, 1159, 1461, 1500
ApaI	GGGCCC	1 cut(s)	1163
ApeKI	GCWGC	5 cut(s)	283, 938, 1183, 1262, 1435
ApoI	RAATTY	2 cut(s)	770, 1363
AspLEI	GCGC	2 cut(s)	660, 1471
AspS9I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
AsuHPI	GGTGA	5 cut(s)	175, 241, 569, 748, 776
AvaII	GGWCC	2 cut(s)	376, 438
AxyI	CCTNAGG	1 cut(s)	27
BaeGI	GKGCMC	1 cut(s)	1163
BalI	TGGCCA	1 cut(s)	1463
BanII	GRGCYC	2 cut(s)	1163, 1452
BauI	CACGAG	2 cut(s)	255, 1203
BbrPI	CACGTG	1 cut(s)	1151
BbsI	GAAGAC	1 cut(s)	831
Bbv12I	GWGCWC	1 cut(s)	1452
BbvCI	CCTCAGC	1 cut(s)	1191
BbvI	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BccI	CCATC	7 cut(s)	79, 196, 427, 518, 704, 1202, 1453
BciT130I	CCWGG	3 cut(s)	341, 540, 609
BciVI	GTATCC	1 cut(s)	199
BclI	TGATCA	2 cut(s)	115, 682
BcoDI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BfaI	CTAG	1 cut(s)	546
BfoI	RGCGCY	1 cut(s)	1472
BfuI	GTATCC	1 cut(s)	199
BisI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
BlsI	GCNGC	7 cut(s)	285, 636, 940, 1074, 1185, 1264, 1437
Bme1390I	CCNGG	3 cut(s)	341, 540, 609
Bme18I	GGWCC	2 cut(s)	376, 438
BmeRI	GACNNNNNGTC	1 cut(s)	903
BmgT120I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
BmiI	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
BmrFI	CCNGG	3 cut(s)	341, 540, 609
BmrI	ACTGGG	1 cut(s)	1157
BmsI	GCATC	4 cut(s)	277, 306, 952, 1291
BmuI	ACTGGG	1 cut(s)	1157
BoxI	GACNNNNGTC	1 cut(s)	443
BpiI	GAAGAC	1 cut(s)	831
BpmI	CTGGAG	1 cut(s)	591
Bpu10I	CCTNAGC	2 cut(s)	594, 1191
BpuEI	CTTGAG	1 cut(s)	1340
Bsa29I	ATCGAT	1 cut(s)	406
BsaAI	YACGTR	3 cut(s)	134, 141, 1151
BsaBI	GATNNNNATC	1 cut(s)	120
BsaHI	GRCGYC	1 cut(s)	463
BsaI	GGTCTC	2 cut(s)	1037, 1206
BsaJI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BsaWI	WCCGGW	3 cut(s)	198, 329, 390
Bsc4I	CCNNNNNNNGG	2 cut(s)	761, 1193
Bse118I	RCCGGY	2 cut(s)	671, 1498
Bse1I	ACTGG	1 cut(s)	1163
Bse21I	CCTNAGG	1 cut(s)	27
Bse8I	GATNNNNATC	1 cut(s)	120
BseAI	TCCGGA	1 cut(s)	198
BseBI	CCWGG	3 cut(s)	341, 540, 609
BseCI	ATCGAT	1 cut(s)	406
BseDI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BseGI	GGATG	3 cut(s)	207, 523, 568
BseJI	GATNNNNATC	1 cut(s)	120
BseLI	CCNNNNNNNGG	2 cut(s)	761, 1193
BseMII	CTCAG	5 cut(s)	18, 248, 608, 1090, 1182
BseNI	ACTGG	1 cut(s)	1163
BseRI	GAGGAG	3 cut(s)	44, 437, 525
BseSI	GKGCMC	1 cut(s)	1163
BseXI	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BsgI	GTGCAG	2 cut(s)	1187, 1396
Bsh1236I	CGCG	1 cut(s)	634
BshFI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BshVI	ATCGAT	1 cut(s)	406
BsiHKAI	GWGCWC	1 cut(s)	1452
BsiSI	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
BslFI	GGGAC	4 cut(s)	431, 451, 811, 1209
BslI	CCNNNNNNNGG	2 cut(s)	761, 1193
BsmAI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BsmBI	CGTCTC	1 cut(s)	894
BsmFI	GGGAC	4 cut(s)	431, 451, 811, 1209
BsmI	GAATGC	1 cut(s)	1482
BsnI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
Bso31I	GGTCTC	2 cut(s)	1037, 1206
Bsp120I	GGGCCC	1 cut(s)	1159
Bsp1286I	GDGCHC	2 cut(s)	1163, 1452
Bsp13I	TCCGGA	1 cut(s)	198
Bsp143I	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
Bsp19I	CCATGG	4 cut(s)	261, 588, 833, 1255
BspACI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
BspANI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BspCNI	CTCAG	5 cut(s)	19, 247, 607, 1089, 1183
BspDI	ATCGAT	1 cut(s)	406
BspEI	TCCGGA	1 cut(s)	198
BspFNI	CGCG	1 cut(s)	634
BspLI	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
BspPI	GGATC	2 cut(s)	1135, 1165
BspQI	GCTCTTC	1 cut(s)	1014
BspTNI	GGTCTC	2 cut(s)	1037, 1206
BsrFI	RCCGGY	2 cut(s)	671, 1498
BsrI	ACTGG	1 cut(s)	1163
BssAI	RCCGGY	2 cut(s)	671, 1498
BssECI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BssMI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
BssNI	GRCGYC	1 cut(s)	463
BssSI	CACGAG	2 cut(s)	255, 1203
BssT1I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Bst2BI	CACGAG	2 cut(s)	255, 1203
Bst2UI	CCWGG	3 cut(s)	341, 540, 609
Bst4CI	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
Bst6I	CTCTTC	1 cut(s)	1014
BstACI	GRCGYC	1 cut(s)	463
BstAPI	GCANNNNNTGC	1 cut(s)	1383
BstBAI	YACGTR	3 cut(s)	134, 141, 1151
BstDEI	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
BstDSI	CCRYGG	5 cut(s)	261, 379, 588, 833, 1255
BstF5I	GGATG	3 cut(s)	207, 523, 568
BstFNI	CGCG	1 cut(s)	634
BstH2I	RGCGCY	1 cut(s)	1472
BstHHI	GCGC	2 cut(s)	660, 1471
BstKTI	GATC	6 cut(s)	118, 410, 685, 915, 1143, 1173
BstMAI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BstMBI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
BstNI	CCWGG	3 cut(s)	341, 540, 609
BstNSI	RCATGY	1 cut(s)	832
BstPAI	GACNNNNGTC	1 cut(s)	443
BstSCI	CCNGG	3 cut(s)	339, 538, 607
BstSLI	GKGCMC	1 cut(s)	1163
BstSNI	TACGTA	1 cut(s)	141
BstUI	CGCG	1 cut(s)	634
BstV1I	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	2 cut(s)	1140, 1170
BstXI	CCANNNNNNTGG	2 cut(s)	589, 1151
BstYI	RGATCY	2 cut(s)	1140, 1170
Bsu15I	ATCGAT	1 cut(s)	406
Bsu36I	CCTNAGG	1 cut(s)	27
BsuI	GTATCC	1 cut(s)	199
BsuRI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BsuTUI	ATCGAT	1 cut(s)	406
BtgI	CCRYGG	5 cut(s)	261, 379, 588, 833, 1255
BtsCI	GGATG	3 cut(s)	207, 523, 568
BtsIMutI	CAGTG	4 cut(s)	670, 807, 1084, 1170
CfoI	GCGC	2 cut(s)	660, 1471
Cfr10I	RCCGGY	2 cut(s)	671, 1498
Cfr13I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
ClaI	ATCGAT	1 cut(s)	406
CseI	GACGC	1 cut(s)	452
DdeI	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
DpnI	GATC	6 cut(s)	117, 409, 684, 914, 1142, 1172
DpnII	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
DraIII	CACNNNGTG	1 cut(s)	59
DriI	GACNNNNNGTC	1 cut(s)	903
EaeI	YGGCCR	2 cut(s)	1461, 1500
Eam1104I	CTCTTC	1 cut(s)	1014
Eam1105I	GACNNNNNGTC	1 cut(s)	903
EarI	CTCTTC	1 cut(s)	1014
Ecl136II	GAGCTC	1 cut(s)	1450
Eco105I	TACGTA	1 cut(s)	141
Eco130I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Eco24I	GRGCYC	2 cut(s)	1163, 1452
Eco31I	GGTCTC	2 cut(s)	1037, 1206
Eco47I	GGWCC	2 cut(s)	376, 438
Eco53kI	GAGCTC	1 cut(s)	1450
Eco57I	CTGAAG	1 cut(s)	1139
Eco72I	CACGTG	1 cut(s)	1151
Eco81I	CCTNAGG	1 cut(s)	27
EcoICRI	GAGCTC	1 cut(s)	1450
EcoO109I	RGGNCCY	2 cut(s)	438, 1159
EcoRI	GAATTC	1 cut(s)	1363
EcoRII	CCWGG	3 cut(s)	339, 538, 607
EcoT14I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	2 cut(s)	1163, 1452
ErhI	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Esp3I	CGTCTC	1 cut(s)	894
FaqI	GGGAC	4 cut(s)	431, 451, 811, 1209
FauI	CCCGC	1 cut(s)	298
FbaI	TGATCA	2 cut(s)	115, 682
FblI	GTMKAC	2 cut(s)	1131, 1216
Fnu4HI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
FokI	GGATG	3 cut(s)	214, 530, 575
FriOI	GRGCYC	2 cut(s)	1163, 1452
Fsp4HI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
FspBI	CTAG	1 cut(s)	546
GlaI	GCGC	2 cut(s)	659, 1470
GluI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
GsuI	CTGGAG	1 cut(s)	591
HaeII	RGCGCY	1 cut(s)	1472
HaeIII	GGCC	4 cut(s)	1098, 1161, 1463, 1502
HapII	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	660, 1471
Hin1I	GRCGYC	1 cut(s)	463
Hin6I	GCGC	2 cut(s)	658, 1469
HinP1I	GCGC	2 cut(s)	658, 1469
HincII	GTYRAC	1 cut(s)	1132
HindII	GTYRAC	1 cut(s)	1132
HindIII	AAGCTT	1 cut(s)	652
HinfI	GANTC	5 cut(s)	18, 347, 361, 384, 1038
HpaII	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
HphI	GGTGA	5 cut(s)	175, 241, 569, 748, 776
Hpy166II	GTNNAC	8 cut(s)	376, 623, 871, 991, 1132, 1154, 1217, 1414
Hpy188I	TCNGA	4 cut(s)	43, 237, 749, 1275
Hpy188III	TCNNGA	9 cut(s)	26, 113, 199, 467, 596, 868, 1042, 1205, 1357
Hpy8I	GTNNAC	8 cut(s)	376, 623, 871, 991, 1132, 1154, 1217, 1414
Hpy99I	CGWCG	1 cut(s)	1136
HpyAV	CCTTC	3 cut(s)	839, 925, 950
HpyCH4III	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
HpyCH4IV	ACGT	5 cut(s)	133, 140, 180, 625, 1150
HpyCH4V	TGCA	8 cut(s)	938, 1168, 1245, 1304, 1349, 1377, 1386, 1431
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
HpyF3I	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
HpySE526I	ACGT	5 cut(s)	133, 140, 180, 625, 1150
Hsp92I	GRCGYC	1 cut(s)	463
HspAI	GCGC	2 cut(s)	658, 1469
KflI	GGGWCCC	1 cut(s)	438
Kpn2I	TCCGGA	1 cut(s)	198
KroI	GCCGGC	1 cut(s)	1498
KroNI	GCCGGC	1 cut(s)	1500
Ksp22I	TGATCA	2 cut(s)	115, 682
Kzo9I	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
LguI	GCTCTTC	1 cut(s)	1014
LmnI	GCTCC	3 cut(s)	265, 538, 610
Lsp1109I	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
LweI	GCATC	4 cut(s)	277, 306, 952, 1291
MaeI	CTAG	1 cut(s)	546
MaeII	ACGT	5 cut(s)	133, 140, 180, 625, 1150
MaeIII	GTNAC	9 cut(s)	181, 247, 393, 626, 638, 764, 850, 982, 1058
MalI	GATC	6 cut(s)	117, 409, 684, 914, 1142, 1172
MboI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
MboII	GAAGA	6 cut(s)	356, 379, 836, 1001, 1372, 1528
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	2 cut(s)	1140, 1170
MhlI	GDGCHC	2 cut(s)	1163, 1452
MlsI	TGGCCA	1 cut(s)	1463
MluCI	AATT	5 cut(s)	187, 512, 770, 900, 1363
MluNI	TGGCCA	1 cut(s)	1463
MlyI	GAGTC	1 cut(s)	12
Mox20I	TGGCCA	1 cut(s)	1463
Mph1103I	ATGCAT	1 cut(s)	1306
MroI	TCCGGA	1 cut(s)	198
MroNI	GCCGGC	1 cut(s)	1498
MscI	TGGCCA	1 cut(s)	1463
MseI	TTAA	1 cut(s)	1337
MslI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
Msp20I	TGGCCA	1 cut(s)	1463
MspA1I	CMGCKG	2 cut(s)	293, 910
MspI	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
MspR9I	CCNGG	3 cut(s)	341, 540, 609
MunI	CAATTG	1 cut(s)	900
Mva1269I	GAATGC	1 cut(s)	1482
MvaI	CCWGG	3 cut(s)	341, 540, 609
MvnI	CGCG	1 cut(s)	634
MwoI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
NaeI	GCCGGC	1 cut(s)	1500
NcoI	CCATGG	4 cut(s)	261, 588, 833, 1255
NdeII	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
NgoMIV	GCCGGC	1 cut(s)	1498
NlaIV	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
NmuCI	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
NsiI	ATGCAT	1 cut(s)	1306
NspI	RCATGY	1 cut(s)	832
OliI	CACNNNNGTG	1 cut(s)	1017
PciSI	GCTCTTC	1 cut(s)	1014
PctI	GAATGC	1 cut(s)	1482
PdiI	GCCGGC	1 cut(s)	1500
PfeI	GAWTC	4 cut(s)	347, 361, 384, 1038
PflMI	CCANNNNNTGG	1 cut(s)	761
PfoI	TCCNGGA	1 cut(s)	538
PkrI	GCNGC	7 cut(s)	285, 636, 940, 1074, 1185, 1264, 1437
PleI	GAGTC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	1151
PmlI	CACGTG	1 cut(s)	1151
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	3 cut(s)	134, 141, 1151
PpuMI	RGGWCCY	1 cut(s)	438
PshAI	GACNNNNGTC	1 cut(s)	443
PsiI	TTATAA	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	1452
Psp5II	RGGWCCY	1 cut(s)	438
Psp6I	CCWGG	3 cut(s)	339, 538, 607
PspCI	CACGTG	1 cut(s)	1151
PspGI	CCWGG	3 cut(s)	339, 538, 607
PspN4I	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
PspOMI	GGGCCC	1 cut(s)	1159
PspPI	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
PspPPI	RGGWCCY	1 cut(s)	438
PsuI	RGATCY	2 cut(s)	1140, 1170
PvuII	CAGCTG	1 cut(s)	910
RseI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
SacI	GAGCTC	1 cut(s)	1452
SalI	GTCGAC	1 cut(s)	1130
SapI	GCTCTTC	1 cut(s)	1014
SaqAI	TTAA	1 cut(s)	1337
SatI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
Sau3AI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
Sau96I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
SchI	GAGTC	1 cut(s)	12
ScrFI	CCNGG	3 cut(s)	341, 540, 609
SduI	GDGCHC	2 cut(s)	1163, 1452
SfaNI	GCATC	4 cut(s)	277, 306, 952, 1291
SinI	GGWCC	2 cut(s)	376, 438
SmiMI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
SmlI	CTYRAG	1 cut(s)	1355
SmoI	CTYRAG	1 cut(s)	1355
SnaBI	TACGTA	1 cut(s)	141
Sse9I	AATT	5 cut(s)	187, 512, 770, 900, 1363
SsiI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
SspMI	CTAG	1 cut(s)	546
SstI	GAGCTC	1 cut(s)	1452
StyD4I	CCNGG	3 cut(s)	339, 538, 607
StyI	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
TaaI	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
TaiI	ACGT	5 cut(s)	136, 143, 183, 628, 1153
TaqI	TCGA	6 cut(s)	406, 915, 1041, 1131, 1290, 1457
TasI	AATT	5 cut(s)	187, 512, 770, 900, 1363
TauI	GCSGC	2 cut(s)	637, 1075
TfiI	GAWTC	4 cut(s)	347, 361, 384, 1038
Tru1I	TTAA	1 cut(s)	1337
Tru9I	TTAA	1 cut(s)	1337
TscAI	CASTG	4 cut(s)	670, 807, 1084, 1170
TseFI	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
TseI	GCWGC	5 cut(s)	283, 938, 1183, 1262, 1435
Tsp45I	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
TspDTI	ATGAA	2 cut(s)	374, 1304
TspGWI	ACGGA	1 cut(s)	876
TspRI	CASTG	4 cut(s)	670, 807, 1084, 1170
Van91I	CCANNNNNTGG	1 cut(s)	761
VpaK11BI	GGWCC	2 cut(s)	376, 438
XapI	RAATTY	2 cut(s)	770, 1363
XceI	RCATGY	1 cut(s)	832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	259
XmiI	GTMKAC	2 cut(s)	1131, 1216
XspI	CTAG	1 cut(s)	546
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.