Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0011028

Physical Location & Seq

Genomic Coordinates Forward (+)

26497484 .. 26499964

Gene Structure 2481 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTTAGTCCAAGCAAGACTCAATCCTGAGGAGGCATATTCGGACACTTATACACATTGTGAAATCCACCCATCACTTATTTTGGGTGTTTGTGCTTCTATTATACCATTTCCTGATCATAATCAGTCTCCACGTAATACGTATCAATCTGCTATGGGGAAGCAAGCTATGGGGATTTACGTCACCAATTATCAGTTCCGGATGGATACATTGGCGTATGTTTTATACTACCCTCAGAAACCGCTTGTCACCACACGAGCCATGGAGCATCTCCACTTCCGGCAGCTTCCCGCTGGCATCAATGCTATTGTTGCCATTTCTTGTTATTCCGGTTATAACCAGGAAGATTCTGTCATTATGAATCAATCCTCTGTGGACCGTGGATTCTTCCGGTCACTATTCTATCGATCTTATAGGGACGAGGAGAAAAAGATGGGGACCCTTGTCAAAGAGGATTTTGGGCGTCCTGACAGAGCAAATACTATGGGTATGCGACATGGTTCTTATGACAAATTGGATGATGATGGTCTTGCTCCTCCTGGAACTAGGGTTTCAGGTGAGGATGTCATCATAGGAAAGACCACACCCATGGCTCAGGACGAGGCTCCAGGGCAAGCGAGTTCACGTTACACGCGGCGTGACCACAGCATAAGCTTGCGCCACAGTGAAACCGGCATAGTTGATCAGGTTCTACTGACGACCAATGCCGATGGGTTGCGGTTTGTCAAAGTAAGGGTGAGGTCTGTCAGAATACCACAGATTGGTGACAAATTCAGTAGCAGACATGGACAGAAAGGGACAGTGGGCATGACTTATACGCAGGAAGACATGCCATGGACTGTGGAAGGGGTCACACCCGATATAATCGTGAACCCACACGCTATTCCGTCTCGCATGACAATTGGTCAGCTGATCGAGTGTATCATGGGGAAGGTTGCAGCTCACATGGGAAAGGAAGGAGATGCTACTCCTTTTACAGATGTGACGGTGGACAATATCAGTAAAGCTCTTCACAGTTGTGGTTATCAAATGCGTGGATTCGAGACCATGTATAATGGTCACACGGGCAGGCGGCTCAGTGCTATGATATTCCTTGGCCCCACATATTACCAAAGACTGAAGCACATGGTCGACGACAAGATCCATTCACGTGGACGGGGCCCAGTGCAGATCCTCACAAGGCAGCCTGCTGAGGGACGGTCTCGTGATGGTGGTCTACGATTTGGAGAAATGGAACGAGATTGCATGATTGCCCATGGTGCTGCTCACTTTCTGAAAGAAAGATTGTTCGACCAGAGTGATGCATATAGGGTTCATGTCTGCGAGCGTTGTGGGTTAATAGCTATTGCAAATCTCAAGAAGAATTCGTTTGAGTGCAGGGGTTGCAAGAACAAAACTGACATTGTTCAGGTTTACATTCCTTATGCCTGCAAGCTGCTATTCCAAGAGCTCATGTCGATGGCCATAGCGCCAAGAATGCTCACAAAGGACATAAAGCCGGCCAAAAACCAAAAGAAGAAAGGAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005665 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0016591 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019222 GO:0019438 GO:0030054 GO:0030880 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034654 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169

Pfam Domains

Protein Families

RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

510

Amino Acids

57.26

Weight (kDa)

9.06

Isoelectric Point (pI)

35.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNA_pol_Rpb2_6	PF00562	31 - 402	3.6e-143	RNA polymerase Rpb2, domain 6
RNA_pol_Rpb2_7	PF04560	404 - 495	2.6e-36	RNA polymerase Rpb2, domain 7

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21710
fragaria_vesca	FvH4_3g09270
malus_domestica	MD05G1313100.v1.1 MD10G1295300.v1.1
prunus_persica	Prupe.4G046700_v2.0.a1
pyrus_communis	pycom05g29100 pycom05g29110 pycom10g24710 pycom10g24720
rosa_chinensis	RchiOBHm_Chr5g0008301
rosa_laevigata	RLG00000031560
rosa_multiflora	Rmu_sc0021840.1_g000003
rosa_roxburghii	Rroxscaffold_1G00068160
rosa_rugosa	Rorug04G0434800
rosa_samantha	Rh5AG063600 Rh5BG060100 Rh5CG070400 Rh5CG070500 Rh5DG059600
rosa_wichuraiana	Rw5G005730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	2 cut(s)	1131, 1216
AccII	CGCG	1 cut(s)	634
AccIII	TCCGGA	1 cut(s)	198
AciI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
AclWI	GGATC	2 cut(s)	1135, 1165
AcoI	YGGCCR	2 cut(s)	1461, 1500
AcsI	RAATTY	2 cut(s)	770, 1363
AcuI	CTGAAG	1 cut(s)	1139
AcvI	CACGTG	1 cut(s)	1151
AcyI	GRCGYC	1 cut(s)	463
AdeI	CACNNNGTG	1 cut(s)	59
AfiI	CCNNNNNNNGG	2 cut(s)	761, 1193
AhdI	GACNNNNNGTC	1 cut(s)	903
AjnI	CCWGG	3 cut(s)	339, 538, 607
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AleI	CACNNNNGTG	1 cut(s)	1017
AluBI	AGCT	9 cut(s)	167, 286, 654, 910, 941, 1007, 1343, 1435, 1450
AluI	AGCT	9 cut(s)	167, 286, 654, 910, 941, 1007, 1343, 1435, 1450
Alw21I	GWGCWC	1 cut(s)	1452
Alw26I	GTCTC	4 cut(s)	132, 894, 1037, 1206
AlwI	GGATC	2 cut(s)	1135, 1165
Aor13HI	TCCGGA	1 cut(s)	198
AoxI	GGCC	4 cut(s)	1096, 1159, 1461, 1500
ApaI	GGGCCC	1 cut(s)	1163
ApeKI	GCWGC	5 cut(s)	283, 938, 1183, 1262, 1435
ApoI	RAATTY	2 cut(s)	770, 1363
AspLEI	GCGC	2 cut(s)	660, 1471
AspS9I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
AsuHPI	GGTGA	5 cut(s)	175, 241, 569, 748, 776
AvaII	GGWCC	2 cut(s)	376, 438
AxyI	CCTNAGG	1 cut(s)	27
BaeGI	GKGCMC	1 cut(s)	1163
BalI	TGGCCA	1 cut(s)	1463
BanII	GRGCYC	2 cut(s)	1163, 1452
BauI	CACGAG	2 cut(s)	255, 1203
BbrPI	CACGTG	1 cut(s)	1151
BbsI	GAAGAC	1 cut(s)	831
Bbv12I	GWGCWC	1 cut(s)	1452
BbvCI	CCTCAGC	1 cut(s)	1191
BbvI	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BccI	CCATC	7 cut(s)	79, 196, 427, 518, 704, 1202, 1453
BciT130I	CCWGG	3 cut(s)	341, 540, 609
BciVI	GTATCC	1 cut(s)	199
BclI	TGATCA	2 cut(s)	115, 682
BcoDI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BfaI	CTAG	1 cut(s)	546
BfoI	RGCGCY	1 cut(s)	1472
BfuI	GTATCC	1 cut(s)	199
BisI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
BlsI	GCNGC	7 cut(s)	285, 636, 940, 1074, 1185, 1264, 1437
Bme1390I	CCNGG	3 cut(s)	341, 540, 609
Bme18I	GGWCC	2 cut(s)	376, 438
BmeRI	GACNNNNNGTC	1 cut(s)	903
BmgT120I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
BmiI	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
BmrFI	CCNGG	3 cut(s)	341, 540, 609
BmrI	ACTGGG	1 cut(s)	1157
BmsI	GCATC	4 cut(s)	277, 306, 952, 1291
BmuI	ACTGGG	1 cut(s)	1157
BoxI	GACNNNNGTC	1 cut(s)	443
BpiI	GAAGAC	1 cut(s)	831
BpmI	CTGGAG	1 cut(s)	591
Bpu10I	CCTNAGC	2 cut(s)	594, 1191
BpuEI	CTTGAG	1 cut(s)	1340
Bsa29I	ATCGAT	1 cut(s)	406
BsaAI	YACGTR	3 cut(s)	134, 141, 1151
BsaBI	GATNNNNATC	1 cut(s)	120
BsaHI	GRCGYC	1 cut(s)	463
BsaI	GGTCTC	2 cut(s)	1037, 1206
BsaJI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BsaWI	WCCGGW	3 cut(s)	198, 329, 390
Bsc4I	CCNNNNNNNGG	2 cut(s)	761, 1193
Bse118I	RCCGGY	2 cut(s)	671, 1498
Bse1I	ACTGG	1 cut(s)	1163
Bse21I	CCTNAGG	1 cut(s)	27
Bse8I	GATNNNNATC	1 cut(s)	120
BseAI	TCCGGA	1 cut(s)	198
BseBI	CCWGG	3 cut(s)	341, 540, 609
BseCI	ATCGAT	1 cut(s)	406
BseDI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BseGI	GGATG	3 cut(s)	207, 523, 568
BseJI	GATNNNNATC	1 cut(s)	120
BseLI	CCNNNNNNNGG	2 cut(s)	761, 1193
BseMII	CTCAG	5 cut(s)	18, 248, 608, 1090, 1182
BseNI	ACTGG	1 cut(s)	1163
BseRI	GAGGAG	3 cut(s)	44, 437, 525
BseSI	GKGCMC	1 cut(s)	1163
BseXI	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BsgI	GTGCAG	2 cut(s)	1187, 1396
Bsh1236I	CGCG	1 cut(s)	634
BshFI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BshVI	ATCGAT	1 cut(s)	406
BsiHKAI	GWGCWC	1 cut(s)	1452
BsiSI	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
BslFI	GGGAC	4 cut(s)	431, 451, 811, 1209
BslI	CCNNNNNNNGG	2 cut(s)	761, 1193
BsmAI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BsmBI	CGTCTC	1 cut(s)	894
BsmFI	GGGAC	4 cut(s)	431, 451, 811, 1209
BsmI	GAATGC	1 cut(s)	1482
BsnI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
Bso31I	GGTCTC	2 cut(s)	1037, 1206
Bsp120I	GGGCCC	1 cut(s)	1159
Bsp1286I	GDGCHC	2 cut(s)	1163, 1452
Bsp13I	TCCGGA	1 cut(s)	198
Bsp143I	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
Bsp19I	CCATGG	4 cut(s)	261, 588, 833, 1255
BspACI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
BspANI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BspCNI	CTCAG	5 cut(s)	19, 247, 607, 1089, 1183
BspDI	ATCGAT	1 cut(s)	406
BspEI	TCCGGA	1 cut(s)	198
BspFNI	CGCG	1 cut(s)	634
BspLI	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
BspPI	GGATC	2 cut(s)	1135, 1165
BspQI	GCTCTTC	1 cut(s)	1014
BspTNI	GGTCTC	2 cut(s)	1037, 1206
BsrFI	RCCGGY	2 cut(s)	671, 1498
BsrI	ACTGG	1 cut(s)	1163
BssAI	RCCGGY	2 cut(s)	671, 1498
BssECI	CCNNGG	7 cut(s)	261, 379, 588, 608, 833, 1093, 1255
BssMI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
BssNI	GRCGYC	1 cut(s)	463
BssSI	CACGAG	2 cut(s)	255, 1203
BssT1I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Bst2BI	CACGAG	2 cut(s)	255, 1203
Bst2UI	CCWGG	3 cut(s)	341, 540, 609
Bst4CI	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
Bst6I	CTCTTC	1 cut(s)	1014
BstACI	GRCGYC	1 cut(s)	463
BstAPI	GCANNNNNTGC	1 cut(s)	1383
BstBAI	YACGTR	3 cut(s)	134, 141, 1151
BstDEI	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
BstDSI	CCRYGG	5 cut(s)	261, 379, 588, 833, 1255
BstF5I	GGATG	3 cut(s)	207, 523, 568
BstFNI	CGCG	1 cut(s)	634
BstH2I	RGCGCY	1 cut(s)	1472
BstHHI	GCGC	2 cut(s)	660, 1471
BstKTI	GATC	6 cut(s)	118, 410, 685, 915, 1143, 1173
BstMAI	GTCTC	4 cut(s)	132, 894, 1037, 1206
BstMBI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
BstNI	CCWGG	3 cut(s)	341, 540, 609
BstNSI	RCATGY	1 cut(s)	832
BstPAI	GACNNNNGTC	1 cut(s)	443
BstSCI	CCNGG	3 cut(s)	339, 538, 607
BstSLI	GKGCMC	1 cut(s)	1163
BstSNI	TACGTA	1 cut(s)	141
BstUI	CGCG	1 cut(s)	634
BstV1I	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
BstV2I	GAAGAC	1 cut(s)	831
BstX2I	RGATCY	2 cut(s)	1140, 1170
BstXI	CCANNNNNNTGG	2 cut(s)	589, 1151
BstYI	RGATCY	2 cut(s)	1140, 1170
Bsu15I	ATCGAT	1 cut(s)	406
Bsu36I	CCTNAGG	1 cut(s)	27
BsuI	GTATCC	1 cut(s)	199
BsuRI	GGCC	4 cut(s)	1098, 1161, 1463, 1502
BsuTUI	ATCGAT	1 cut(s)	406
BtgI	CCRYGG	5 cut(s)	261, 379, 588, 833, 1255
BtsCI	GGATG	3 cut(s)	207, 523, 568
BtsIMutI	CAGTG	4 cut(s)	670, 807, 1084, 1170
CfoI	GCGC	2 cut(s)	660, 1471
Cfr10I	RCCGGY	2 cut(s)	671, 1498
Cfr13I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
ClaI	ATCGAT	1 cut(s)	406
CseI	GACGC	1 cut(s)	452
DdeI	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
DpnI	GATC	6 cut(s)	117, 409, 684, 914, 1142, 1172
DpnII	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
DraIII	CACNNNGTG	1 cut(s)	59
DriI	GACNNNNNGTC	1 cut(s)	903
EaeI	YGGCCR	2 cut(s)	1461, 1500
Eam1104I	CTCTTC	1 cut(s)	1014
Eam1105I	GACNNNNNGTC	1 cut(s)	903
EarI	CTCTTC	1 cut(s)	1014
Ecl136II	GAGCTC	1 cut(s)	1450
Eco105I	TACGTA	1 cut(s)	141
Eco130I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Eco24I	GRGCYC	2 cut(s)	1163, 1452
Eco31I	GGTCTC	2 cut(s)	1037, 1206
Eco47I	GGWCC	2 cut(s)	376, 438
Eco53kI	GAGCTC	1 cut(s)	1450
Eco57I	CTGAAG	1 cut(s)	1139
Eco72I	CACGTG	1 cut(s)	1151
Eco81I	CCTNAGG	1 cut(s)	27
EcoICRI	GAGCTC	1 cut(s)	1450
EcoO109I	RGGNCCY	2 cut(s)	438, 1159
EcoRI	GAATTC	1 cut(s)	1363
EcoRII	CCWGG	3 cut(s)	339, 538, 607
EcoT14I	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	2 cut(s)	1163, 1452
ErhI	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
Esp3I	CGTCTC	1 cut(s)	894
FaqI	GGGAC	4 cut(s)	431, 451, 811, 1209
FauI	CCCGC	1 cut(s)	298
FbaI	TGATCA	2 cut(s)	115, 682
FblI	GTMKAC	2 cut(s)	1131, 1216
Fnu4HI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
FokI	GGATG	3 cut(s)	214, 530, 575
FriOI	GRGCYC	2 cut(s)	1163, 1452
Fsp4HI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
FspBI	CTAG	1 cut(s)	546
GlaI	GCGC	2 cut(s)	659, 1470
GluI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
GsuI	CTGGAG	1 cut(s)	591
HaeII	RGCGCY	1 cut(s)	1472
HaeIII	GGCC	4 cut(s)	1098, 1161, 1463, 1502
HapII	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	660, 1471
Hin1I	GRCGYC	1 cut(s)	463
Hin6I	GCGC	2 cut(s)	658, 1469
HinP1I	GCGC	2 cut(s)	658, 1469
HincII	GTYRAC	1 cut(s)	1132
HindII	GTYRAC	1 cut(s)	1132
HindIII	AAGCTT	1 cut(s)	652
HinfI	GANTC	5 cut(s)	18, 347, 361, 384, 1038
HpaII	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
HphI	GGTGA	5 cut(s)	175, 241, 569, 748, 776
Hpy166II	GTNNAC	8 cut(s)	376, 623, 871, 991, 1132, 1154, 1217, 1414
Hpy188I	TCNGA	4 cut(s)	43, 237, 749, 1275
Hpy188III	TCNNGA	9 cut(s)	26, 113, 199, 467, 596, 868, 1042, 1205, 1357
Hpy8I	GTNNAC	8 cut(s)	376, 623, 871, 991, 1132, 1154, 1217, 1414
Hpy99I	CGWCG	1 cut(s)	1136
HpyAV	CCTTC	3 cut(s)	839, 925, 950
HpyCH4III	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
HpyCH4IV	ACGT	5 cut(s)	133, 140, 180, 625, 1150
HpyCH4V	TGCA	8 cut(s)	938, 1168, 1245, 1304, 1349, 1377, 1386, 1431
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
HpyF3I	CTNAG	5 cut(s)	27, 234, 594, 1076, 1191
HpySE526I	ACGT	5 cut(s)	133, 140, 180, 625, 1150
Hsp92I	GRCGYC	1 cut(s)	463
HspAI	GCGC	2 cut(s)	658, 1469
KflI	GGGWCCC	1 cut(s)	438
Kpn2I	TCCGGA	1 cut(s)	198
KroI	GCCGGC	1 cut(s)	1498
KroNI	GCCGGC	1 cut(s)	1500
Ksp22I	TGATCA	2 cut(s)	115, 682
Kzo9I	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
LguI	GCTCTTC	1 cut(s)	1014
LmnI	GCTCC	3 cut(s)	265, 538, 610
Lsp1109I	GCAGC	5 cut(s)	295, 950, 1195, 1249, 1422
LweI	GCATC	4 cut(s)	277, 306, 952, 1291
MaeI	CTAG	1 cut(s)	546
MaeII	ACGT	5 cut(s)	133, 140, 180, 625, 1150
MaeIII	GTNAC	9 cut(s)	181, 247, 393, 626, 638, 764, 850, 982, 1058
MalI	GATC	6 cut(s)	117, 409, 684, 914, 1142, 1172
MboI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
MboII	GAAGA	6 cut(s)	356, 379, 836, 1001, 1372, 1528
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	2 cut(s)	1140, 1170
MhlI	GDGCHC	2 cut(s)	1163, 1452
MlsI	TGGCCA	1 cut(s)	1463
MluCI	AATT	5 cut(s)	187, 512, 770, 900, 1363
MluNI	TGGCCA	1 cut(s)	1463
MlyI	GAGTC	1 cut(s)	12
Mox20I	TGGCCA	1 cut(s)	1463
Mph1103I	ATGCAT	1 cut(s)	1306
MroI	TCCGGA	1 cut(s)	198
MroNI	GCCGGC	1 cut(s)	1498
MscI	TGGCCA	1 cut(s)	1463
MseI	TTAA	1 cut(s)	1337
MslI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
Msp20I	TGGCCA	1 cut(s)	1463
MspA1I	CMGCKG	2 cut(s)	293, 910
MspI	CCGG	6 cut(s)	199, 280, 330, 391, 672, 1499
MspR9I	CCNGG	3 cut(s)	341, 540, 609
MunI	CAATTG	1 cut(s)	900
Mva1269I	GAATGC	1 cut(s)	1482
MvaI	CCWGG	3 cut(s)	341, 540, 609
MvnI	CGCG	1 cut(s)	634
MwoI	GCNNNNNNNGC	4 cut(s)	311, 1259, 1383, 1477
NaeI	GCCGGC	1 cut(s)	1500
NcoI	CCATGG	4 cut(s)	261, 588, 833, 1255
NdeII	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
NgoMIV	GCCGGC	1 cut(s)	1498
NlaIV	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
NmuCI	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
NsiI	ATGCAT	1 cut(s)	1306
NspI	RCATGY	1 cut(s)	832
OliI	CACNNNNGTG	1 cut(s)	1017
PciSI	GCTCTTC	1 cut(s)	1014
PctI	GAATGC	1 cut(s)	1482
PdiI	GCCGGC	1 cut(s)	1500
PfeI	GAWTC	4 cut(s)	347, 361, 384, 1038
PflMI	CCANNNNNTGG	1 cut(s)	761
PfoI	TCCNGGA	1 cut(s)	538
PkrI	GCNGC	7 cut(s)	285, 636, 940, 1074, 1185, 1264, 1437
PleI	GAGTC	1 cut(s)	12
PmaCI	CACGTG	1 cut(s)	1151
PmlI	CACGTG	1 cut(s)	1151
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	3 cut(s)	134, 141, 1151
PpuMI	RGGWCCY	1 cut(s)	438
PshAI	GACNNNNGTC	1 cut(s)	443
PsiI	TTATAA	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	1452
Psp5II	RGGWCCY	1 cut(s)	438
Psp6I	CCWGG	3 cut(s)	339, 538, 607
PspCI	CACGTG	1 cut(s)	1151
PspGI	CCWGG	3 cut(s)	339, 538, 607
PspN4I	GGNNCC	6 cut(s)	439, 440, 606, 1099, 1160, 1161
PspOMI	GGGCCC	1 cut(s)	1159
PspPI	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
PspPPI	RGGWCCY	1 cut(s)	438
PsuI	RGATCY	2 cut(s)	1140, 1170
PvuII	CAGCTG	1 cut(s)	910
RseI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
SacI	GAGCTC	1 cut(s)	1452
SalI	GTCGAC	1 cut(s)	1130
SapI	GCTCTTC	1 cut(s)	1014
SaqAI	TTAA	1 cut(s)	1337
SatI	GCNGC	7 cut(s)	284, 635, 939, 1073, 1184, 1263, 1436
Sau3AI	GATC	6 cut(s)	115, 407, 682, 912, 1140, 1170
Sau96I	GGNCC	5 cut(s)	376, 438, 1097, 1159, 1160
SchI	GAGTC	1 cut(s)	12
ScrFI	CCNGG	3 cut(s)	341, 540, 609
SduI	GDGCHC	2 cut(s)	1163, 1452
SfaNI	GCATC	4 cut(s)	277, 306, 952, 1291
SinI	GGWCC	2 cut(s)	376, 438
SmiMI	CAYNNNNRTG	4 cut(s)	587, 1017, 1149, 1457
SmlI	CTYRAG	1 cut(s)	1355
SmoI	CTYRAG	1 cut(s)	1355
SnaBI	TACGTA	1 cut(s)	141
Sse9I	AATT	5 cut(s)	187, 512, 770, 900, 1363
SsiI	CCGC	5 cut(s)	242, 291, 634, 718, 1072
SspMI	CTAG	1 cut(s)	546
SstI	GAGCTC	1 cut(s)	1452
StyD4I	CCNGG	3 cut(s)	339, 538, 607
StyI	CCWWGG	5 cut(s)	261, 588, 833, 1093, 1255
TaaI	ACNGT	7 cut(s)	380, 665, 802, 841, 988, 1016, 1200
TaiI	ACGT	5 cut(s)	136, 143, 183, 628, 1153
TaqI	TCGA	6 cut(s)	406, 915, 1041, 1131, 1290, 1457
TasI	AATT	5 cut(s)	187, 512, 770, 900, 1363
TauI	GCSGC	2 cut(s)	637, 1075
TfiI	GAWTC	4 cut(s)	347, 361, 384, 1038
Tru1I	TTAA	1 cut(s)	1337
Tru9I	TTAA	1 cut(s)	1337
TscAI	CASTG	4 cut(s)	670, 807, 1084, 1170
TseFI	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
TseI	GCWGC	5 cut(s)	283, 938, 1183, 1262, 1435
Tsp45I	GTSAC	8 cut(s)	181, 247, 393, 638, 764, 850, 982, 1058
TspDTI	ATGAA	2 cut(s)	374, 1304
TspGWI	ACGGA	1 cut(s)	876
TspRI	CASTG	4 cut(s)	670, 807, 1084, 1170
Van91I	CCANNNNNTGG	1 cut(s)	761
VpaK11BI	GGWCC	2 cut(s)	376, 438
XapI	RAATTY	2 cut(s)	770, 1363
XceI	RCATGY	1 cut(s)	832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	259
XmiI	GTMKAC	2 cut(s)	1131, 1216
XspI	CTAG	1 cut(s)	546
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.