Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0011077

Physical Location & Seq

Genomic Coordinates Reverse (-)

28058901 .. 28062372

Gene Structure 3472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGCGCCGGTGAGCTTCTCCTCAATGTTGGCCAACGGCTGCCGGAGTTTCAGTGCGCCGGCGGCCCTTGTGCGCACGTTAGCACTCACCCACGTTGCTCTCAGTGAACACTCCAACAGCTACAGGCACGTTAAGGTGGCATGGTTTTCTCGGAGTTCGAATAAACGAAAATCTGCACGTCAGTCCCTGAAACAAGATGTTTCGCAGCCAACTTCCGTTTCTTCTGCAAATGGCTACCCTGAATATACTCGGTTGCTTCCATGTCCCTCAGACAACGGACCACCAAGAATTGAGCACTTGGTTGTTTCAGAAGGGGGGCCTGTTCTAGAATATATCTGCAAAGTTCTGGATCGTCCTCTTCAGTTTGTTGCAGATCTCATCCATTTTGGAGCTGTATATTATGCCCTTGTCTGTCCACGGCCTCCTCCAACTGCAACCCAAGAGCAGATGAGGGTATTTAAAGAAGTTACAGCACCATCAGTACTAAAAGATAGAACTTCCATCAAAGGAAAAACTGTAAGAGAAGCACAGAAGACTTTCCGCATAACACATCCAGACCAATTTGTTGAAACCGGAACCTACTTACGTGTTCATGTACACCCAAAGCGTTTTCCTAGGTGCTATGAAATTGACTGGAAATCAAGAATTGTAGCTGTAACTGATGAATTCGTGGTTTTGGACAAACCTGCTGGTACAACAGTAGGAGGAACTACAGACAACATTGAAGAAAGTTGTGCAACCTTTGCCACTCGTGCCTTGGGACTAACAACGTCCCTGATGACTACACATCAGATTGATAATTGTACAGAAGGATGTGTTGTCTTAGCTAGAACCAAGGAGTATTGCTCAGTTTTTCACGGAAAAATCAGAGAGAAAAAGGTGAAGAAGCATTATCTTGCTCTTGCCGCTGCCCCTGTGCCAATTGGAACAATTACTCACTACATGCGTCCAATTAACATGGCTCCAAGACTCACTTCAGAAGATTTCATGGAACGGTGGAGTTTGTGTCAACTTGAAGTCATGGAATGCAAGGAGGTTCCCTGGCCAAGTTCTGTTGTGGAAAAGAAATATTGTATTGAAGACTGTGGGTGGCCTTCAAAAGAATATGCATATGAGTGTAAAATCAACCTTCTGACTGGGCGGACTCATCAGGTTCGAGCACAACTGGCAGCGCTTGGTGCACCAATAGTTGGCGATTCCATGTACATGCCAGCTGCAGTTGCAGAAATGGCAAGTCCTGGGCGGAACCCCTTTGGCAAATATAAGAAGCATTATACTCATGTAACTGATAAAGAAGTAGCGATTGAAGAGTGGAGTGCACAGCATGGAAAGGAACCTGGTGTTGCTATTGGTCTTCAAGCATGTCAGATATCATGGGATGATGGGAAGTACACTTTTGAGGCTGGAGCTCCTTGGTGGAGGTGCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006139 GO:0006206 GO:0006213 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009119 GO:0009451 GO:0009982 GO:0009987 GO:0016070 GO:0016853 GO:0016866 GO:0018130 GO:0019438 GO:0019858 GO:0034641 GO:0034654 GO:0043094 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0046087 GO:0046131 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090304 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2

Protein Analysis

477

Amino Acids

53.18

Weight (kDa)

8.8

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_2	PF00849	223 - 391	1.8e-27	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011077)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21770 AT4G21770
fragaria_vesca	FvH4_3g02480 FvH4_3g02480 FvH4_3g02480
malus_domestica	MD10G1317000.v1.1 MD10G1317600.v1.1
prunus_persica	Prupe.4G024200_v2.0.a1
pyrus_communis	pycom10g26870
rosa_chinensis	RchiOBHm_Chr5g0003731
rosa_laevigata	RLG00000031171
rosa_multiflora	Rmu_co8501515.1_g000001 Rmu_sc0000500.1_g000006 Rmu_sc0033912.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072230
rosa_rugosa	Rorug04G0406500
rosa_samantha	Rh5AG033500 Rh5BG031900 Rh5CG036200
rosa_wichuraiana	Rw5G003090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	74
Acc36I	ACCTGC	1 cut(s)	694
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	1 cut(s)	1190
AciI	CCGC	5 cut(s)	62, 541, 906, 1141, 1243
AclWI	GGATC	1 cut(s)	357
AcoI	YGGCCR	2 cut(s)	30, 1043
AcsI	RAATTY	1 cut(s)	665
AcuI	CTGAAG	2 cut(s)	344, 960
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	6 cut(s)	483, 597, 694, 805, 1205, 1391
AfeI	AGCGCT	1 cut(s)	1173
AfiI	CCNNNNNNNGG	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	586
AgsI	TTSAA	7 cut(s)	569, 725, 1016, 1079, 1098, 1307, 1358
AjiI	CACGTC	1 cut(s)	179
AjnI	CCWGG	3 cut(s)	1040, 1237, 1336
AjuI	GAANNNNNNNTTGG	4 cut(s)	202, 234, 958, 990
AluBI	AGCT	7 cut(s)	15, 120, 392, 653, 827, 1214, 1409
AluI	AGCT	7 cut(s)	15, 120, 392, 653, 827, 1214, 1409
Alw21I	GWGCWC	5 cut(s)	297, 1162, 1183, 1321, 1411
Alw44I	GTGCAC	2 cut(s)	1179, 1317
AlwI	GGATC	1 cut(s)	357
AlwNI	CAGNNNCTG	1 cut(s)	187
Aor51HI	AGCGCT	1 cut(s)	1173
AoxI	GGCC	6 cut(s)	30, 63, 317, 419, 1043, 1091
ApaLI	GTGCAC	2 cut(s)	1179, 1317
ApeKI	GCWGC	5 cut(s)	39, 205, 908, 1169, 1214
ApoI	RAATTY	1 cut(s)	665
Asp700I	GAANNNNTTC	1 cut(s)	536
AspA2I	CCTAGG	1 cut(s)	614
AspLEI	GCGC	4 cut(s)	7, 58, 75, 1174
AspS9I	GGNCC	3 cut(s)	64, 278, 317
AsuHPI	GGTGA	3 cut(s)	22, 79, 892
AsuII	TTCGAA	1 cut(s)	158
AvaII	GGWCC	1 cut(s)	278
AvrII	CCTAGG	1 cut(s)	614
BaeGI	GKGCMC	2 cut(s)	1183, 1321
BaeI	ACNNNNGTAYC	2 cut(s)	684, 717
BalI	TGGCCA	2 cut(s)	32, 1045
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1411
BauI	CACGAG	1 cut(s)	750
BbsI	GAAGAC	3 cut(s)	539, 1086, 1346
Bbv12I	GWGCWC	5 cut(s)	297, 1162, 1183, 1321, 1411
BbvI	GCAGC	5 cut(s)	26, 217, 895, 1181, 1201
BccI	CCATC	3 cut(s)	484, 509, 1376
BceAI	ACGGC	2 cut(s)	52, 434
BciT130I	CCWGG	3 cut(s)	1042, 1239, 1338
BfaI	CTAG	3 cut(s)	326, 615, 828
BfmI	CTRYAG	3 cut(s)	121, 711, 1215
BfoI	RGCGCY	2 cut(s)	8, 1175
BfuAI	ACCTGC	1 cut(s)	694
BglII	AGATCT	1 cut(s)	373
BisI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
BlnI	CCTAGG	1 cut(s)	614
BlsI	GCNGC	7 cut(s)	41, 64, 207, 907, 910, 1171, 1216
BmcAI	AGTACT	1 cut(s)	483
Bme1390I	CCNGG	3 cut(s)	1042, 1239, 1338
Bme18I	GGWCC	1 cut(s)	278
BmgBI	CACGTC	1 cut(s)	179
BmgT120I	GGNCC	3 cut(s)	64, 278, 317
BmiI	GGNNCC	7 cut(s)	6, 318, 577, 963, 1038, 1247, 1335
BmrFI	CCNGG	3 cut(s)	1042, 1239, 1338
BmrI	ACTGGG	1 cut(s)	1146
BmuI	ACTGGG	1 cut(s)	1146
BpiI	GAAGAC	3 cut(s)	539, 1086, 1346
BplI	GAGNNNNNCTC	2 cut(s)	830, 862
BpmI	CTGGAG	1 cut(s)	1425
Bpu14I	TTCGAA	1 cut(s)	158
BsaAI	YACGTR	1 cut(s)	587
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	7 cut(s)	416, 614, 756, 834, 1040, 1238, 1412
BsaWI	WCCGGW	1 cut(s)	572
BsaXI	ACNNNNNCTCC	4 cut(s)	37, 67, 991, 1021
Bsc4I	CCNNNNNNNGG	1 cut(s)	1190
Bse118I	RCCGGY	2 cut(s)	7, 58
Bse1I	ACTGG	3 cut(s)	638, 1141, 1170
BseBI	CCWGG	3 cut(s)	1042, 1239, 1338
BseDI	CCNNGG	7 cut(s)	416, 614, 756, 834, 1040, 1238, 1412
BseGI	GGATG	4 cut(s)	378, 550, 818, 1384
BseLI	CCNNNNNNNGG	1 cut(s)	1190
BseMII	CTCAG	3 cut(s)	115, 282, 861
BseNI	ACTGG	3 cut(s)	638, 1141, 1170
BseRI	GAGGAG	2 cut(s)	10, 414
BseSI	GKGCMC	2 cut(s)	1183, 1321
BseXI	GCAGC	5 cut(s)	26, 217, 895, 1181, 1201
BsgI	GTGCAG	1 cut(s)	159
BshFI	GGCC	6 cut(s)	32, 65, 319, 421, 1045, 1093
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	5 cut(s)	297, 1162, 1183, 1321, 1411
BsiSI	CCGG	4 cut(s)	8, 43, 59, 573
BslFI	GGGAC	4 cut(s)	169, 249, 757, 774
BslI	CCNNNNNNNGG	1 cut(s)	1190
BsmFI	GGGAC	4 cut(s)	169, 249, 757, 774
BsmI	GAATGC	1 cut(s)	1031
BsnI	GGCC	6 cut(s)	32, 65, 319, 421, 1045, 1093
Bsp119I	TTCGAA	1 cut(s)	158
Bsp1286I	GDGCHC	5 cut(s)	297, 1162, 1183, 1321, 1411
Bsp1407I	TGTACA	3 cut(s)	595, 803, 1203
Bsp143I	GATC	2 cut(s)	349, 373
BspACI	CCGC	5 cut(s)	62, 541, 906, 1141, 1243
BspANI	GGCC	6 cut(s)	32, 65, 319, 421, 1045, 1093
BspCNI	CTCAG	3 cut(s)	114, 281, 860
BspLI	GGNNCC	7 cut(s)	6, 318, 577, 963, 1038, 1247, 1335
BspMAI	CTGCAG	1 cut(s)	1219
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	1 cut(s)	357
BspT104I	TTCGAA	1 cut(s)	158
BspT107I	GGYRCC	1 cut(s)	4
BsrFI	RCCGGY	2 cut(s)	7, 58
BsrGI	TGTACA	3 cut(s)	595, 803, 1203
BsrI	ACTGG	3 cut(s)	638, 1141, 1170
BssAI	RCCGGY	2 cut(s)	7, 58
BssECI	CCNNGG	7 cut(s)	416, 614, 756, 834, 1040, 1238, 1412
BssMI	GATC	2 cut(s)	349, 373
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	750
BssT1I	CCWWGG	4 cut(s)	614, 756, 834, 1412
Bst2BI	CACGAG	1 cut(s)	750
Bst2UI	CCWGG	3 cut(s)	1042, 1239, 1338
Bst4CI	ACNGT	4 cut(s)	517, 700, 996, 1085
Bst6I	CTCTTC	2 cut(s)	363, 1302
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	1 cut(s)	743
BstAUI	TGTACA	3 cut(s)	595, 803, 1203
BstBAI	YACGTR	1 cut(s)	587
BstBI	TTCGAA	1 cut(s)	158
BstC8I	GCNNGC	2 cut(s)	60, 1212
BstDEI	CTNAG	4 cut(s)	101, 268, 823, 847
BstDSI	CCRYGG	1 cut(s)	416
BstF5I	GGATG	4 cut(s)	378, 550, 818, 1384
BstH2I	RGCGCY	2 cut(s)	8, 1175
BstHHI	GCGC	4 cut(s)	7, 58, 75, 1174
BstKTI	GATC	2 cut(s)	352, 376
BstMBI	GATC	2 cut(s)	349, 373
BstMWI	GCNNNNNNNGC	8 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229
BstNI	CCWGG	3 cut(s)	1042, 1239, 1338
BstNSI	RCATGY	3 cut(s)	946, 1210, 1365
BstSCI	CCNGG	3 cut(s)	1040, 1237, 1336
BstSFI	CTRYAG	3 cut(s)	121, 711, 1215
BstSLI	GKGCMC	2 cut(s)	1183, 1321
BstV1I	GCAGC	5 cut(s)	26, 217, 895, 1181, 1201
BstV2I	GAAGAC	3 cut(s)	539, 1086, 1346
BstX2I	RGATCY	1 cut(s)	373
BstYI	RGATCY	1 cut(s)	373
BsuRI	GGCC	6 cut(s)	32, 65, 319, 421, 1045, 1093
BtgI	CCRYGG	1 cut(s)	416
BtrI	CACGTC	1 cut(s)	179
BtsCI	GGATG	4 cut(s)	378, 550, 818, 1384
BtsIMutI	CAGTG	2 cut(s)	58, 109
BveI	ACCTGC	1 cut(s)	694
Cac8I	GCNNGC	2 cut(s)	60, 1212
CaiI	CAGNNNCTG	1 cut(s)	187
CfoI	GCGC	4 cut(s)	7, 58, 75, 1174
Cfr10I	RCCGGY	2 cut(s)	7, 58
Cfr13I	GGNCC	3 cut(s)	64, 278, 317
CseI	GACGC	1 cut(s)	935
CsiI	ACCWGGT	1 cut(s)	1336
Csp6I	GTAC	6 cut(s)	482, 596, 693, 804, 1204, 1390
CviQI	GTAC	6 cut(s)	482, 596, 693, 804, 1204, 1390
DdeI	CTNAG	4 cut(s)	101, 268, 823, 847
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	2 cut(s)	351, 375
DpnII	GATC	2 cut(s)	349, 373
DraI	TTTAAA	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	30, 1043
Eam1104I	CTCTTC	2 cut(s)	363, 1302
EarI	CTCTTC	2 cut(s)	363, 1302
EciI	GGCGGA	2 cut(s)	1156, 1258
Ecl136II	GAGCTC	1 cut(s)	1409
Eco130I	CCWWGG	4 cut(s)	614, 756, 834, 1412
Eco24I	GRGCYC	1 cut(s)	1411
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	1 cut(s)	278
Eco47III	AGCGCT	1 cut(s)	1173
Eco53kI	GAGCTC	1 cut(s)	1409
Eco57I	CTGAAG	2 cut(s)	344, 960
EcoICRI	GAGCTC	1 cut(s)	1409
EcoO109I	RGGNCCY	1 cut(s)	317
EcoRI	GAATTC	1 cut(s)	665
EcoRII	CCWGG	3 cut(s)	1040, 1237, 1336
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	4 cut(s)	614, 756, 834, 1412
EcoT22I	ATGCAT	1 cut(s)	1111
EcoT38I	GRGCYC	1 cut(s)	1411
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	4 cut(s)	614, 756, 834, 1412
FalI	AAGNNNNNCTT	2 cut(s)	958, 990
FaqI	GGGAC	4 cut(s)	169, 249, 757, 774
FauNDI	CATATG	1 cut(s)	1111
Fnu4HI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
FokI	GGATG	4 cut(s)	365, 537, 825, 1391
FriOI	GRGCYC	1 cut(s)	1411
Fsp4HI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
FspAI	RTGCGCAY	1 cut(s)	74
FspBI	CTAG	3 cut(s)	326, 615, 828
FspI	TGCGCA	1 cut(s)	74
GlaI	GCGC	4 cut(s)	6, 57, 74, 1173
GluI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
GsuI	CTGGAG	1 cut(s)	1425
HaeII	RGCGCY	2 cut(s)	8, 1175
HaeIII	GGCC	6 cut(s)	32, 65, 319, 421, 1045, 1093
HapII	CCGG	4 cut(s)	8, 43, 59, 573
HgaI	GACGC	1 cut(s)	935
HhaI	GCGC	4 cut(s)	7, 58, 75, 1174
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	4 cut(s)	5, 56, 73, 1172
HinP1I	GCGC	4 cut(s)	5, 56, 73, 1172
HincII	GTYRAC	1 cut(s)	1010
HindII	GTYRAC	1 cut(s)	1010
HinfI	GANTC	3 cut(s)	969, 1144, 1196
HpaII	CCGG	4 cut(s)	8, 43, 59, 573
HphI	GGTGA	3 cut(s)	22, 79, 892
Hpy166II	GTNNAC	7 cut(s)	107, 416, 598, 1010, 1181, 1319, 1392
Hpy188I	TCNGA	8 cut(s)	153, 271, 310, 792, 869, 979, 1134, 1368
Hpy188III	TCNNGA	4 cut(s)	326, 347, 554, 642
Hpy8I	GTNNAC	7 cut(s)	107, 416, 598, 1010, 1181, 1319, 1392
HpyAV	CCTTC	4 cut(s)	305, 803, 1104, 1139
HpyCH4III	ACNGT	4 cut(s)	517, 700, 996, 1085
HpyCH4IV	ACGT	6 cut(s)	77, 93, 129, 178, 586, 770
HpyF10VI	GCNNNNNNNGC	8 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229
HpyF3I	CTNAG	4 cut(s)	101, 268, 823, 847
HpySE526I	ACGT	6 cut(s)	77, 93, 129, 178, 586, 770
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	4 cut(s)	5, 56, 73, 1172
KasI	GGCGCC	1 cut(s)	4
KroI	GCCGGC	1 cut(s)	58
KroNI	GCCGGC	1 cut(s)	60
Kzo9I	GATC	2 cut(s)	349, 373
LmnI	GCTCC	4 cut(s)	389, 967, 1406, 1414
Lsp1109I	GCAGC	5 cut(s)	26, 217, 895, 1181, 1201
MabI	ACCWGGT	1 cut(s)	1336
MaeI	CTAG	3 cut(s)	326, 615, 828
MaeII	ACGT	6 cut(s)	77, 93, 129, 178, 586, 770
MaeIII	GTNAC	3 cut(s)	466, 655, 1282
MalI	GATC	2 cut(s)	351, 375
MboI	GATC	2 cut(s)	349, 373
MboII	GAAGA	9 cut(s)	213, 350, 544, 737, 895, 992, 1091, 1319, 1346
MfeI	CAATTG	1 cut(s)	921
MflI	RGATCY	1 cut(s)	373
MhlI	GDGCHC	5 cut(s)	297, 1162, 1183, 1321, 1411
MlsI	TGGCCA	2 cut(s)	32, 1045
MluNI	TGGCCA	2 cut(s)	32, 1045
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	963, 1138
MmeI	TCCRAC	2 cut(s)	138, 452
Mox20I	TGGCCA	2 cut(s)	32, 1045
Mph1103I	ATGCAT	1 cut(s)	1111
MreI	CGCCGGCG	1 cut(s)	58
MroNI	GCCGGC	1 cut(s)	58
MroXI	GAANNNNTTC	1 cut(s)	536
MscI	TGGCCA	2 cut(s)	32, 1045
MseI	TTAA	4 cut(s)	132, 459, 954, 1429
MslI	CAYNNNNRTG	2 cut(s)	1114, 1205
Msp20I	TGGCCA	2 cut(s)	32, 1045
MspA1I	CMGCKG	2 cut(s)	908, 1214
MspI	CCGG	4 cut(s)	8, 43, 59, 573
MspR9I	CCNGG	3 cut(s)	1042, 1239, 1338
MunI	CAATTG	1 cut(s)	921
Mva1269I	GAATGC	1 cut(s)	1031
MvaI	CCWGG	3 cut(s)	1042, 1239, 1338
MwoI	GCNNNNNNNGC	8 cut(s)	62, 743, 752, 905, 1166, 1178, 1220, 1229
NaeI	GCCGGC	1 cut(s)	60
NarI	GGCGCC	1 cut(s)	5
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	2 cut(s)	349, 373
NgoMIV	GCCGGC	1 cut(s)	58
NlaIV	GGNNCC	7 cut(s)	6, 318, 577, 963, 1038, 1247, 1335
NsbI	TGCGCA	1 cut(s)	74
NsiI	ATGCAT	1 cut(s)	1111
NspI	RCATGY	3 cut(s)	946, 1210, 1365
NspV	TTCGAA	1 cut(s)	158
PctI	GAATGC	1 cut(s)	1031
PdiI	GCCGGC	1 cut(s)	60
PdmI	GAANNNNTTC	1 cut(s)	536
PfeI	GAWTC	1 cut(s)	1196
PflMI	CCANNNNNTGG	1 cut(s)	1190
PkrI	GCNGC	7 cut(s)	41, 64, 207, 907, 910, 1171, 1216
PleI	GAGTC	2 cut(s)	963, 1138
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	963, 1138
Ppu21I	YACGTR	1 cut(s)	587
Psp124BI	GAGCTC	1 cut(s)	1411
Psp6I	CCWGG	3 cut(s)	1040, 1237, 1336
PspGI	CCWGG	3 cut(s)	1040, 1237, 1336
PspN4I	GGNNCC	7 cut(s)	6, 318, 577, 963, 1038, 1247, 1335
PspPI	GGNCC	3 cut(s)	64, 278, 317
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	1 cut(s)	187
PsuI	RGATCY	1 cut(s)	373
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	6 cut(s)	483, 597, 694, 805, 1205, 1391
RsaNI	GTAC	6 cut(s)	482, 596, 693, 804, 1204, 1390
RseI	CAYNNNNRTG	2 cut(s)	1114, 1205
SacI	GAGCTC	1 cut(s)	1411
SaqAI	TTAA	4 cut(s)	132, 459, 954, 1429
SatI	GCNGC	7 cut(s)	40, 63, 206, 906, 909, 1170, 1215
Sau3AI	GATC	2 cut(s)	349, 373
Sau96I	GGNCC	3 cut(s)	64, 278, 317
ScaI	AGTACT	1 cut(s)	483
SchI	GAGTC	2 cut(s)	963, 1138
ScrFI	CCNGG	3 cut(s)	1042, 1239, 1338
SduI	GDGCHC	5 cut(s)	297, 1162, 1183, 1321, 1411
SexAI	ACCWGGT	1 cut(s)	1336
SfcI	CTRYAG	3 cut(s)	121, 711, 1215
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	158
SgrAI	CRCCGGYG	2 cut(s)	7, 58
SinI	GGWCC	1 cut(s)	278
SmiMI	CAYNNNNRTG	2 cut(s)	1114, 1205
SsiI	CCGC	5 cut(s)	62, 541, 906, 1141, 1243
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1070
SspMI	CTAG	3 cut(s)	326, 615, 828
SstI	GAGCTC	1 cut(s)	1411
StyD4I	CCNGG	3 cut(s)	1040, 1237, 1336
StyI	CCWWGG	4 cut(s)	614, 756, 834, 1412
TaaI	ACNGT	4 cut(s)	517, 700, 996, 1085
TaiI	ACGT	6 cut(s)	80, 96, 132, 181, 589, 773
TaqI	TCGA	2 cut(s)	158, 1156
TatI	WGTACW	5 cut(s)	481, 595, 803, 1203, 1389
TauI	GCSGC	2 cut(s)	65, 908
TfiI	GAWTC	1 cut(s)	1196
Tru1I	TTAA	4 cut(s)	132, 459, 954, 1429
Tru9I	TTAA	4 cut(s)	132, 459, 954, 1429
TscAI	CASTG	2 cut(s)	58, 109
TseI	GCWGC	5 cut(s)	39, 205, 908, 1169, 1214
TspDTI	ATGAA	4 cut(s)	581, 639, 678, 976
TspGWI	ACGGA	3 cut(s)	205, 291, 873
TspRI	CASTG	2 cut(s)	58, 109
Van91I	CCANNNNNTGG	1 cut(s)	1190
VneI	GTGCAC	2 cut(s)	1179, 1317
VpaK11BI	GGWCC	1 cut(s)	278
XapI	RAATTY	1 cut(s)	665
XbaI	TCTAGA	1 cut(s)	325
XceI	RCATGY	3 cut(s)	946, 1210, 1365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	754
XmaJI	CCTAGG	1 cut(s)	614
XmnI	GAANNNNTTC	1 cut(s)	536
XspI	CTAG	3 cut(s)	326, 615, 828
ZrmI	AGTACT	1 cut(s)	483
Zsp2I	ATGCAT	1 cut(s)	1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.