pycom11g02920

oligopeptide transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2302812 .. 2310723
7912 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g02920.7

Sequence Viewer

Length: 5817 bp
ATGGGTTCACTTGGGATCATTTCATGCTCAGTTCTTGCCTTTGTCAACCAGTTTTTCGGGTATCGCCAGAATCAGCTTTACGTTTCTTCAGTCTCAGCGCAAATTCTTGTCCTGCCTCTTGGGAAGCTGATGGCTGCTACTCTTCCGAAGAGAAGAATCCGACTTCCGTATAGAAATTGGTCTTTTTCATTGAATCCGGGGCCTTTCAACTTGAAAGAACATGTGTTGATCACTATATTTGCCAACTCAGGATCGAACAGTGTTTATGCTGTTAACATTATCACGATTGTCATGGCTTTCTACCACAGACCAATGCATCCTGCAGCTGCCTTCTTGTTAGCACAAACCACTCAGCGAAATTCATACTTTCTGGAATGTGTGAAAACTTTTCAGATGCTTGGGTATGGATGGGCTGGCATTTTCAGAAAATACCTTGTTGACTCTCCTTACATGTGGTGGCCTTCAAATCTTGTTCAAGTCTCTCTTTTCAGGGCACTGCACGAAAAGGAAAACAGACCGAAGGGAGGCCGAACCAGGCTGCAGTTCTTCTTCATGGTTTTCATCTGCAGCTTTGCTTACTACATTGTTCCGAGTTTTCTTTTCCCCTCCATTTCCGCTTTCTCCTTTGTTTGCTGGATATATAAGGATTCCATCACCGCGCAACAGATTGGTTCCGGCATGCATGGCCTTGGCATTGGCTCATTTGGCTTTGATTGGTCCACTGTTGCCGGTTTCTTAGGCAGCCCCTTAGCTACGCCTGGATTCGCAACCATTAACATCTTAATCGGTTTTGTCTTGATTGTCTACATTGTTACCCCCATTGCTTATTGGAACAATGCCTACGATGCTCAAAAGTTTCCAATCATTACGTCTCACACTTTCGACTCCACTGGCCAGAGCTATAACATTTCCAGAGTACTGGATCAGAAAAATTTCGACATTAACATGGTAGGGTATAACGGTTACAGTAAACTCTATCTCAGTACCTTCTTTGCCTTCTCTTATGGACTGAGCTTTGCCACTTTGACGGCTACTATTTCGCACGTTGCTCTCTTCCACGGAAGAACAATCTGGAAGATGTGGAAAAAAACAACTAGTGCAGTGAAAGATCAGATCGGTGACATCCACACCCGACTGATGAAGAAGAACTATGATGCAGTGCCTCAATGGTGGTTTCAAATCATCCTTGTTTCAATGGTTGCTCTTGCTATCTATACTTGCGAAGGTTTCGGAAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGCGGCATTGCCCTATTTTTCACCTTACCTATCGGCATTATTCAAGCCACAACGAACCAGCAACCAGGGCTTAATGTGATCACGGAGCTACTCATTGGGTACATTTATCCGGGGAAGCCTGTTGCTAATGTGGCTTTCAAGACCTATGGATATATCAGTATGTCACAGGCACTCAATTTTCTTGGTGACTTCAAATTAGGCCACTATATGAAGATCCCTCCTAAGTCCATGTTTGTTGTGCAGTTAGTTGGAACGCTAGTAGCTTCAAGTGTCTACTTTGGCACATCCTGGTGGCTTATCACAAGCATCGAGTACATCTGTGATCCATTGAAGCTGCCAACGGGAAGTCCATGGACATGCCCGGGAGATGATGTGTTCTACAATGCTTCAATCATATGGGGGGTCATAGGCCCCCTCAGGATGTTCGCAGGCAAAGGTATCTACCCGGAAATGAACTGGTTCTTCCTCATTGGTTTGCTTGCACCTGTTCCAATTTGGTTCCTCTCCAAAAAATTCCCCAACCAGAAGTGGATTAAGCTCATAAACATGCCGATAATTCTAGGGGCAACGGGCTCCATGCCGCCTGCTAGGGCTGTGAACTACTTGACATGGCTTTCAGTTGGGATTTTCTTCAACTTTTATGTGTACAGAAAGTACAAGGGGTGGTGGGCTAGGCATAACTACATACTATCTGCTGCTTTGGATGCTGGTGTGGCCTTCACAGCAGTTCTTCTGTATTTTACCCTTCAATCCAAGAATATTATGGGGCCCGGCTGGTGGGGTCTCGAAGCGGATGACCATTGTCCGTTGGCCGAGTGCCCCACGGCGCCAGGTGTAGTTGCCAAAGGCTGTCCGGTTCTCTATAATTGTGCAAAATCATATATATATATATATATATATATATATATAGGCCAATTCTGGCAGATTGGTAATGAAATATATGAATCTGTACAGTTAAGTGATTATAAACAAGTTGTTTTTAGTTTTCATAATTTGAAACTGGTGGATGCAAACAAACTTTTATGTAACAACATAATATTATCAAATATGAGGCTAGCAACTCAAATGGTTAGTAGCATTCACCGTTACGGACAACGTTTTATTATGAACAGTACTATAAGAAATATACACGCTGACGTCTTTAATGTCAAGTTTACATTAAGTCAAAACTTTTCCAATCATACTTCATTACAAAGAAGTGTTGCTATTTGGACCACAATTTTTTCTCACCCTATCTCCGCTGGTCAGATTTCAAATAGAAGAAGTGACACCAATGGACGAGTAATTCTCAACTCTATAAAATTCGACGTAAGTGTGTGCTCACTGATGACAGTGAACTACAACGATGACATCCCTGGCGGGAAGTCTCACTTCAACATCGACTATTGTGATTCACTACTTACAGATATATCGGAGTTTAACATGATTTTTATTTTTATTTTATGCTTTTATACAAGTAATCTAACGGTTCTGACCACCGATGACCCGTCGGAGCCAACCATGACGTTTTGGATGTGGGTTCTTGGCCAATTATCTTGCGTTACTCTCGCTTTCGTGAACCAATTTTTTGGGTACTGGAAAAACCAGCTATACGTTTCTTCAGCGTCAGCACAAAACTTAGGCGTCCCACTCAGAAAGTTGATGGCTGCGGTCCTTCCGGCGACAGAATTCCAAGTTCCGTTTACAAGGCCATTCTGTGTTGATACTATATTTGCAAACTCTGGATCAAACAGTGTTTATGCAAACATTATCACAATTGTCAAGGCTTACTACCACAGAAATATTCATGTCATGGCAGCCTTCTGTTATCTCAAACAACTCAGGCGGGCTCCGCTTGTAGAAAAACTTGAGACTAGACCTCCCATATATGGCGGAATGAGTGACAAATGTTGTCTACTAGGTCTCAGCTGGAACATAACTCAAAGTCTCAAACTGACGCATGGTGGGGTGAATACAATTTTTCGTGAATACCTACAAGCACTTTGTGCCAACACATGTTTGACCTTTAGGTTTGACCCAGCAGCCTCACTTGATCAGTTTAACTCGTTGAATCAAATTCAATGGTCAAATATAGAGGGAAGTCCGTGGACATGTCCCGGAGATGATGTGCTCTACAATCCTTCAATGATATGGAGATTGAACCAATTCTTTCTCCTTGGCTTTTTGTTGCCTATTCCCAGTTGGCTACTCCATAAAAAGTTCCCCGATAAAAAGTGGATTCAGCACATAATCATGCCTATACTTCTTGGATCAACAGGTTCATTACCACCGGCAAAAGCCGAAAACTATTTGTCATGGTTTGCATTTGGACTTGTCTTCAACTTTTATGTTCACAGAAACTGCTTTGGATGCCAGTGTGGCCTTTACAGCAGTTATCCTATATGTCACACTCCAATCCAGGGATATTGTCCAAAGTGGTTGGGTCTGGAACAAGACAACCATTGTCCGTTGGCCAAGTGTCCGACAGCACCAGTGATAGAGACTAAAGGGTCAAACCATAGCCCAGTTGTTCTAATTTTGACGATGGTGATGATATTCACCATCGTGGCTGGTTCGGAAAGATGTAGCGTCTTGTGCACTGAAATAGTTTGTTTATTTTTCATAATTTGGAGTCAGTTGAACCGTATAATGTTCTTAATTAGGAGTCTAGATCCTCTTACCAGTAATCCTTGCAGGAATAAGTTTGAAAGCAGCATGACAGTCCTCACAAACACGAAGATTCTTCAGAATTCGAATTGGTTTTCTCGCTGTGACGATAGACAAATTTTTCCTTCTGGTCCTCTTCTATCTTCATTTTCTCAACTAGTTTCTCCCACATTTGGACAATCTCCTGAGCTTGCGGATGGGTTTCATCCCCAGCAACAAACTCATAAACTACTCCATCCACCCTCATTAACTTTCTCACTCTTGCTGTGTCTTCCCACCGTTGTGCTTCGGCATAAATTCAGAAAGGTGCTTTGTTGCTTCTTCAGCCAGTTCAATGTTTTTGTGAACTTTGCATCCGCCAAGGAGAGCTCCCCATACGACACTATTGGGCTTGATAGGCATGTTAATGATAAACTCGTGAGCCTCTTGAAGGAGCCCTGCCCTACTCAAAAGATCAACCATGCAACCGTAGTGCTCAATTTTAGGAACTATACCATAATCGTTAGTCATGCTGGTGAAGAATTCACGACCCTGATCCACATACCCAATGTGGCTACAAGCATGCAACAGTCCTACAAAGGTTACATCATTCGGATCCATGCCTTTCTCAATCATCTCAGAGAAAAGTCTCAAAGCTTCCTCAGCTTGTCCATGCACGGCAAGCCCTGCAATCATCGCATCCTCCAAGCATCCACATTTGACATACATTTCAATCAAAGTATTGGAAACGCGAACATTTCTACTAAACCCACTTTGGTTCGAGTACTCATGAATTCTCCTACCCAAATCCAAGTCCCCCAAATCAGCACATGCAGCAAGAACAGCCACTACGGTCACCTCATTTGGCTTCACGCCAGCCTCTTCCATCTCCAAAAACAAACCAATAGCCTCCTTAGGCTTCCCGCATTGAACAAACCCCGAAATCATCAACTCATACGCCCCCTTAATTTCACCCCTCTTTACCAACTGGGTTATCATTATATTCCACGTCACAACATCCCTCTGCGGCATTTTATCAAACACCAACCGCGCATCTCGCTCTCCGCCACACAAAGTATACAAATTCAGAATCATATTCATCAGAAACAAATTCGACTGAAATCCAAGTTTCTCTACATACCCATGTATCCCTCTGCCTTTGGAAACGTCCAACAAACGTGTACACGCCTTCAGAACGAAAGAAAGTGTAAAACTATCCGGCGAAACACAAAAGCTCTGCAACTGGTTAAAAAGCAGAATTGCATCAATGGGGTCGTTGCCTTCGGCGAAGGCTTTCAGGCACGAGTTCCAGGCTTCTGTCTCGGGGGTTTCGAGATGTTGGAAGAGTTTCCGGGCGTAGGAGAAGCTGGAGTTGAGAGAGCAAACGAAGGCGATTCGAGAGGGAGGGAGGGAAGTGAGAGGAGAGTTGGTTTTGATGAGGTGGAGTCTGTATTGTGGTTCAGAGGAGGAAGATGGAGGCAAGTGACCGTTGAAAGCATTGAGACTTTTCAAAAGGTCGTTGCCTTTCAACGGTTTTTCTTCACTTTTGATTCTCTGAAGCGTCGGCCTTGGGTTTTATATAAGGCGCTTCTAAAGCTTTGGGGTTTGGCATTTGGTTTTAAAAACGTCAACGGTATCAAAAATTCGTTCATAAAATTGGGAGAGCCTATTGACTATGAAATCTTAAATGCTTTTAACCACTTGAACTATAATTTTCTTACGAGTTTGAATTTCGTGGATGACGAATTCGATACCAAATTATGTTGTCCATTATGTGACTTAGCCGAACTCCCCCTCCTCTTAGTACAAAATATATCTTTTAGGCCTCGCAATTTCTACATTATTGGATCACCCTTTAAAAATAATTTAACAAGTCTGGTCACTATCACAGGCATAAAAATTTCTTGTATAATCTGTTAA

Protein Analysis

1939

Amino Acids

220.19

Weight (kDa)

9.31

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2238
AasI GACNNNNNNGTC 1 cut(s) 3760
AatII GACGTC 1 cut(s) 2412
AccB1I GGYRCC 1 cut(s) 2098
AccI GTMKAC 4 cut(s) 804, 1545, 3166, 4975
AccII CGCG 3 cut(s) 659, 4649, 4948
AclI AACGTT 1 cut(s) 2368
AcoI YGGCCR 4 cut(s) 892, 2082, 2797, 3723
AcuI CTGAAG 6 cut(s) 72, 2856, 3980, 4225, 5072, 5474
AcyI GRCGYC 3 cut(s) 2099, 2409, 2895
AdeI CACNNNGTG 1 cut(s) 3257
AfiI CCNNNNNNNGG 9 cut(s) 524, 1256, 2049, 3140, 3671, 4091, 4348, 5255, 5427
AflIII ACRYGT 5 cut(s) 220, 450, 3266, 3362, 5075
AhlI ACTAGT 2 cut(s) 1094, 4075
AjiI CACGTC 1 cut(s) 4907
AjnI CCWGG 8 cut(s) 533, 757, 1336, 1559, 2101, 2626, 3669, 5206
AleI CACNNNNGTG 2 cut(s) 3815, 4199
AloI GAACNNNNNNTCC 4 cut(s) 4256, 4288, 5676, 5708
Alw21I GWGCWC 5 cut(s) 2594, 3384, 3851, 4289, 4395
Alw44I GTGCAC 1 cut(s) 3847
AlwNI CAGNNNCTG 1 cut(s) 3612
Ama87I CYCGRG 2 cut(s) 1633, 5219
ApaI GGGCCC 1 cut(s) 2043
ApaLI GTGCAC 1 cut(s) 3847
Asp700I GAANNNNTTC 5 cut(s) 932, 1730, 3416, 5190, 5244
AspLEI GCGC 5 cut(s) 100, 661, 2101, 4950, 5485
AspS9I GGNCC 8 cut(s) 200, 717, 1682, 2039, 2040, 2484, 2923, 4049
AsuC2I CCSGG 8 cut(s) 198, 1383, 1634, 1635, 1718, 2043, 3369, 5250
AsuII TTCGAA 1 cut(s) 4004
AsuNHI GCTAGC 1 cut(s) 2326
AvaI CYCGRG 2 cut(s) 1633, 5219
AvaII GGWCC 4 cut(s) 717, 2484, 2923, 4049
AxyI CCTNAGG 2 cut(s) 1688, 4811
BaeGI GKGCMC 4 cut(s) 496, 2043, 2093, 3851
BaeI ACNNNNGTAYC 2 cut(s) 5027, 5060
BalI TGGCCA 3 cut(s) 894, 2799, 3725
BamHI GGATCC 1 cut(s) 4512
BanI GGYRCC 1 cut(s) 2098
BanII GRGCYC 5 cut(s) 1847, 2043, 3103, 4289, 4356
BauI CACGAG 2 cut(s) 4334, 5199
BbsI GAAGAC 2 cut(s) 3580, 4181
Bbv12I GWGCWC 5 cut(s) 2594, 3384, 3851, 4289, 4395
BbvCI CCTCAGC 1 cut(s) 4559
BceAI ACGGC 3 cut(s) 1044, 2112, 4591
BciT130I CCWGG 8 cut(s) 535, 759, 1338, 1561, 2103, 2628, 3671, 5208
BciVI GTATCC 1 cut(s) 5055
BclI TGATCA 3 cut(s) 228, 1350, 3304
BcnI CCSGG 8 cut(s) 198, 1383, 1634, 1635, 1718, 2043, 3369, 5250
BcuI ACTAGT 2 cut(s) 1094, 4075
BfmI CTRYAG 3 cut(s) 321, 539, 565
BfoI RGCGCY 2 cut(s) 2102, 5486
BfuI GTATCC 1 cut(s) 5055
BglI GCCNNNNNGGC 1 cut(s) 3630
BmcAI AGTACT 3 cut(s) 918, 2386, 4683
Bme18I GGWCC 4 cut(s) 717, 2484, 2923, 4049
BmeT110I CYCGRG 2 cut(s) 1633, 5219
BmgBI CACGTC 1 cut(s) 4907
BmgT120I GGNCC 8 cut(s) 200, 717, 1682, 2039, 2040, 2484, 2923, 4049
BmrI ACTGGG 3 cut(s) 3444, 3770, 4895
BmtI GCTAGC 1 cut(s) 2330
BmuI ACTGGG 3 cut(s) 3444, 3770, 4895
BoxI GACNNNNGTC 1 cut(s) 2073
BpiI GAAGAC 2 cut(s) 3580, 4181
BplI GAGNNNNNCTC 2 cut(s) 2544, 2576
BpmI CTGGAG 1 cut(s) 5286
Bpu10I CCTNAGC 3 cut(s) 748, 4104, 4559
Bpu14I TTCGAA 1 cut(s) 4004
BpuEI CTTGAG 1 cut(s) 3140
BpuMI CCSGG 8 cut(s) 198, 1383, 1634, 1635, 1718, 2043, 3369, 5250
BsaHI GRCGYC 3 cut(s) 2099, 2409, 2895
BsaI GGTCTC 2 cut(s) 2060, 3179
BsaWI WCCGGW 1 cut(s) 2125
Bsc4I CCNNNNNNNGG 9 cut(s) 524, 1256, 2049, 3140, 3671, 4091, 4348, 5255, 5427
Bse118I RCCGGY 2 cut(s) 728, 3541
Bse21I CCTNAGG 2 cut(s) 1688, 4811
Bse3DI GCAATG 2 cut(s) 819, 1278
BseBI CCWGG 8 cut(s) 535, 759, 1338, 1561, 2103, 2628, 3671, 5208
BseLI CCNNNNNNNGG 9 cut(s) 524, 1256, 2049, 3140, 3671, 4091, 4348, 5255, 5427
BseMI GCAATG 2 cut(s) 819, 1278
BseRI GAGGAG 3 cut(s) 5332, 5376, 5684
BseSI GKGCMC 4 cut(s) 496, 2043, 2093, 3851
BseYI CCCAGC 2 cut(s) 3289, 4128
BsgI GTGCAG 3 cut(s) 482, 1119, 1532
Bsh1236I CGCG 3 cut(s) 659, 4649, 4948
BshNI GGYRCC 1 cut(s) 2098
BsiHKAI GWGCWC 5 cut(s) 2594, 3384, 3851, 4289, 4395
BsiHKCI CYCGRG 2 cut(s) 1633, 5219
BslFI GGGAC 3 cut(s) 2882, 3351, 4697
BslI CCNNNNNNNGG 9 cut(s) 524, 1256, 2049, 3140, 3671, 4091, 4348, 5255, 5427
BsmBI CGTCTC 1 cut(s) 876
BsmFI GGGAC 3 cut(s) 2882, 3351, 4697
BsmI GAATGC 1 cut(s) 2349
Bso31I GGTCTC 2 cut(s) 2060, 3179
BsoBI CYCGRG 2 cut(s) 1633, 5219
Bsp119I TTCGAA 1 cut(s) 4004
Bsp120I GGGCCC 1 cut(s) 2039
Bsp1407I TGTACA 3 cut(s) 1917, 2221, 5078
Bsp19I CCATGG 2 cut(s) 1250, 1622
BspFNI CGCG 3 cut(s) 659, 4649, 4948
BspHI TCATGA 1 cut(s) 4686
BspMAI CTGCAG 3 cut(s) 325, 543, 569
BspOI GCTAGC 1 cut(s) 2330
BspT104I TTCGAA 1 cut(s) 4004
BspT107I GGYRCC 1 cut(s) 2098
BspTNI GGTCTC 2 cut(s) 2060, 3179
BsrDI GCAATG 2 cut(s) 819, 1278
BsrFI RCCGGY 2 cut(s) 728, 3541
BsrGI TGTACA 3 cut(s) 1917, 2221, 5078
BssAI RCCGGY 2 cut(s) 728, 3541
BssNAI GTATAC 1 cut(s) 4976
BssNI GRCGYC 3 cut(s) 2099, 2409, 2895
BssSI CACGAG 2 cut(s) 4334, 5199
BssT1I CCWWGG 6 cut(s) 688, 1250, 1622, 3427, 4278, 5465
Bst1107I GTATAC 1 cut(s) 4976
Bst2BI CACGAG 2 cut(s) 4334, 5199
Bst2UI CCWGG 8 cut(s) 535, 759, 1338, 1561, 2103, 2628, 3671, 5208
Bst6I CTCTTC 6 cut(s) 143, 147, 1058, 4059, 4784, 5235
BstACI GRCGYC 3 cut(s) 2099, 2409, 2895
BstAPI GCANNNNNTGC 2 cut(s) 3257, 4584
BstAUI TGTACA 3 cut(s) 1917, 2221, 5078
BstBI TTCGAA 1 cut(s) 4004
BstDSI CCRYGG 5 cut(s) 1057, 1250, 1622, 2094, 3356
BstEII GGTNACC 1 cut(s) 4751
BstENI CCTNNNNNAGG 1 cut(s) 4346
BstFNI CGCG 3 cut(s) 659, 4649, 4948
BstH2I RGCGCY 2 cut(s) 2102, 5486
BstHHI GCGC 5 cut(s) 100, 661, 2101, 4950, 5485
BstNI CCWGG 8 cut(s) 535, 759, 1338, 1561, 2103, 2628, 3671, 5208
BstPAI GACNNNNGTC 1 cut(s) 2073
BstPI GGTNACC 1 cut(s) 4751
BstSFI CTRYAG 3 cut(s) 321, 539, 565
BstSLI GKGCMC 4 cut(s) 496, 2043, 2093, 3851
BstUI CGCG 3 cut(s) 659, 4649, 4948
BstV2I GAAGAC 2 cut(s) 3580, 4181
BstX2I RGATCY 3 cut(s) 1485, 3922, 4512
BstXI CCANNNNNNTGG 2 cut(s) 919, 2840
BstYI RGATCY 3 cut(s) 1485, 3922, 4512
BstZ17I GTATAC 1 cut(s) 4976
Bsu36I CCTNAGG 2 cut(s) 1688, 4811
BsuI GTATCC 1 cut(s) 5055
BtgI CCRYGG 5 cut(s) 1057, 1250, 1622, 2094, 3356
BtgZI GCGATG 1 cut(s) 4577
BtrI CACGTC 1 cut(s) 4907
BtsI GCAGTG 3 cut(s) 494, 1107, 1164
CaiI CAGNNNCTG 1 cut(s) 3612
CciI TCATGA 1 cut(s) 4686
CfoI GCGC 5 cut(s) 100, 661, 2101, 4950, 5485
Cfr10I RCCGGY 2 cut(s) 728, 3541
Cfr13I GGNCC 8 cut(s) 200, 717, 1682, 2039, 2040, 2484, 2923, 4049
Cfr9I CCCGGG 1 cut(s) 1633
CseI GACGC 5 cut(s) 2865, 2884, 3217, 3829, 5447
DinI GGCGCC 1 cut(s) 2100
DraI TTTAAA 2 cut(s) 5518, 5755
DraIII CACNNNGTG 1 cut(s) 3257
DrdI GACNNNNNNGTC 1 cut(s) 3760
DseDI GACNNNNNNGTC 1 cut(s) 3760
EaeI YGGCCR 4 cut(s) 892, 2082, 2797, 3723
Eam1104I CTCTTC 6 cut(s) 143, 147, 1058, 4059, 4784, 5235
EarI CTCTTC 6 cut(s) 143, 147, 1058, 4059, 4784, 5235
EciI GGCGGA 3 cut(s) 3159, 4264, 4951
Ecl136II GAGCTC 1 cut(s) 4287
Eco130I CCWWGG 6 cut(s) 688, 1250, 1622, 3427, 4278, 5465
Eco147I AGGCCT 1 cut(s) 5722
Eco24I GRGCYC 5 cut(s) 1847, 2043, 3103, 4289, 4356
Eco31I GGTCTC 2 cut(s) 2060, 3179
Eco47I GGWCC 4 cut(s) 717, 2484, 2923, 4049
Eco53kI GAGCTC 1 cut(s) 4287
Eco57I CTGAAG 6 cut(s) 72, 2856, 3980, 4225, 5072, 5474
Eco81I CCTNAGG 2 cut(s) 1688, 4811
Eco88I CYCGRG 2 cut(s) 1633, 5219
Eco91I GGTNACC 1 cut(s) 4751
EcoICRI GAGCTC 1 cut(s) 4287
EcoNI CCTNNNNNAGG 1 cut(s) 4346
EcoO109I RGGNCCY 3 cut(s) 200, 1682, 2039
EcoO65I GGTNACC 1 cut(s) 4751
EcoRI GAATTC 5 cut(s) 2939, 4000, 4439, 4690, 5642
EcoRII CCWGG 8 cut(s) 533, 757, 1336, 1559, 2101, 2626, 3669, 5206
EcoT14I CCWWGG 6 cut(s) 688, 1250, 1622, 3427, 4278, 5465
EcoT22I ATGCAT 2 cut(s) 318, 684
EcoT38I GRGCYC 5 cut(s) 1847, 2043, 3103, 4289, 4356
EgeI GGCGCC 1 cut(s) 2100
EheI GGCGCC 1 cut(s) 2100
ErhI CCWWGG 6 cut(s) 688, 1250, 1622, 3427, 4278, 5465
Esp3I CGTCTC 1 cut(s) 876
FalI AAGNNNNNCTT 4 cut(s) 468, 500, 2627, 2659
FaqI GGGAC 3 cut(s) 2882, 3351, 4697
FauI CCCGC 3 cut(s) 2624, 3090, 4828
FauNDI CATATG 1 cut(s) 1667
FbaI TGATCA 3 cut(s) 228, 1350, 3304
FblI GTMKAC 4 cut(s) 804, 1545, 3166, 4975
FriOI GRGCYC 5 cut(s) 1847, 2043, 3103, 4289, 4356
GlaI GCGC 5 cut(s) 99, 660, 2100, 4949, 5484
GsaI CCCAGC 2 cut(s) 3293, 4132
GsuI CTGGAG 1 cut(s) 5286
HaeII RGCGCY 2 cut(s) 2102, 5486
HgaI GACGC 5 cut(s) 2865, 2884, 3217, 3829, 5447
HhaI GCGC 5 cut(s) 100, 661, 2101, 4950, 5485
Hin1I GRCGYC 3 cut(s) 2099, 2409, 2895
Hin6I GCGC 5 cut(s) 98, 659, 2099, 4948, 5483
HinP1I GCGC 5 cut(s) 98, 659, 2099, 4948, 5483
HincII GTYRAC 4 cut(s) 46, 274, 439, 5527
HindII GTYRAC 4 cut(s) 46, 274, 439, 5527
HindIII AAGCTT 2 cut(s) 4552, 5492
HpaI GTTAAC 1 cut(s) 274
Hpy99I CGWCG 3 cut(s) 2582, 2764, 5463
Hsp92I GRCGYC 3 cut(s) 2099, 2409, 2895
HspAI GCGC 5 cut(s) 98, 659, 2099, 4948, 5483
KasI GGCGCC 1 cut(s) 2098
Ksp22I TGATCA 3 cut(s) 228, 1350, 3304
KspAI GTTAAC 1 cut(s) 274
LmnI GCTCC 7 cut(s) 1245, 1357, 1850, 2764, 3106, 4292, 4351
MfeI CAATTG 1 cut(s) 3027
MflI RGATCY 3 cut(s) 1485, 3922, 4512
MlsI TGGCCA 3 cut(s) 894, 2799, 3725
MluNI TGGCCA 3 cut(s) 894, 2799, 3725
Mly113I GGCGCC 1 cut(s) 2099
MlyI GAGTC 5 cut(s) 434, 878, 3892, 3925, 5351
MmeI TCCRAC 7 cut(s) 184, 1267, 1501, 2742, 3758, 5092, 5217
Mox20I TGGCCA 3 cut(s) 894, 2799, 3725
Mph1103I ATGCAT 2 cut(s) 318, 684
MroXI GAANNNNTTC 5 cut(s) 932, 1730, 3416, 5190, 5244
MscI TGGCCA 3 cut(s) 894, 2799, 3725
Msp20I TGGCCA 3 cut(s) 894, 2799, 3725
MspA1I CMGCKG 3 cut(s) 326, 2513, 3180
MunI CAATTG 1 cut(s) 3027
Mva1269I GAATGC 1 cut(s) 2349
MvaI CCWGG 8 cut(s) 535, 759, 1338, 1561, 2103, 2628, 3671, 5208
MvnI CGCG 3 cut(s) 659, 4649, 4948
NarI GGCGCC 1 cut(s) 2099
NciI CCSGG 8 cut(s) 198, 1383, 1634, 1635, 1718, 2043, 3369, 5250
NcoI CCATGG 2 cut(s) 1250, 1622
NdeI CATATG 1 cut(s) 1667
NheI GCTAGC 1 cut(s) 2326
NmeAIII GCCGAG 1 cut(s) 2110
NsiI ATGCAT 2 cut(s) 318, 684
NspV TTCGAA 1 cut(s) 4004
OliI CACNNNNGTG 2 cut(s) 3815, 4199
PaeI GCATGC 2 cut(s) 682, 4483
PagI TCATGA 1 cut(s) 4686
PceI AGGCCT 1 cut(s) 5722
PciI ACATGT 4 cut(s) 220, 450, 3266, 3362
PcsI WCGNNNNNNNCGW 2 cut(s) 5226, 5637
PctI GAATGC 1 cut(s) 2349
PdmI GAANNNNTTC 5 cut(s) 932, 1730, 3416, 5190, 5244
PfoI TCCNGGA 1 cut(s) 3367
PleI GAGTC 5 cut(s) 434, 878, 3891, 3924, 5350
PluTI GGCGCC 1 cut(s) 2102
PpsI GAGTC 5 cut(s) 434, 878, 3891, 3924, 5350
PscI ACATGT 4 cut(s) 220, 450, 3266, 3362
PshAI GACNNNNGTC 1 cut(s) 2073
PsiI TTATAA 1 cut(s) 2238
Psp124BI GAGCTC 1 cut(s) 4289
Psp1406I AACGTT 1 cut(s) 2368
Psp6I CCWGG 8 cut(s) 533, 757, 1336, 1559, 2101, 2626, 3669, 5206
PspEI GGTNACC 1 cut(s) 4751
PspFI CCCAGC 2 cut(s) 3289, 4128
PspGI CCWGG 8 cut(s) 533, 757, 1336, 1559, 2101, 2626, 3669, 5206
PspOMI GGGCCC 1 cut(s) 2039
PspPI GGNCC 8 cut(s) 200, 717, 1682, 2039, 2040, 2484, 2923, 4049
PsrI GAACNNNNNNTAC 4 cut(s) 824, 856, 4730, 4762
PstI CTGCAG 3 cut(s) 325, 543, 569
PstNI CAGNNNCTG 1 cut(s) 3612
PsuI RGATCY 3 cut(s) 1485, 3922, 4512
PvuII CAGCTG 2 cut(s) 326, 3180
SacI GAGCTC 1 cut(s) 4289
Sau96I GGNCC 8 cut(s) 200, 717, 1682, 2039, 2040, 2484, 2923, 4049
ScaI AGTACT 3 cut(s) 918, 2386, 4683
SchI GAGTC 5 cut(s) 434, 878, 3892, 3925, 5351
SfcI CTRYAG 3 cut(s) 321, 539, 565
SfoI GGCGCC 1 cut(s) 2100
SfuI TTCGAA 1 cut(s) 4004
SinI GGWCC 4 cut(s) 717, 2484, 2923, 4049
SmaI CCCGGG 1 cut(s) 1635
SmlI CTYRAG 1 cut(s) 3119
SmoI CTYRAG 1 cut(s) 3119
SpeI ACTAGT 2 cut(s) 1094, 4075
SphI GCATGC 2 cut(s) 682, 4483
SseBI AGGCCT 1 cut(s) 5722
SspDI GGCGCC 1 cut(s) 2098
SspI AATATT 3 cut(s) 2032, 2310, 3055
SstI GAGCTC 1 cut(s) 4289
StuI AGGCCT 1 cut(s) 5722
StyI CCWWGG 6 cut(s) 688, 1250, 1622, 3427, 4278, 5465
TaqII GACCGA 1 cut(s) 532
TatI WGTACW 9 cut(s) 916, 1584, 1917, 1926, 2221, 2384, 4681, 5078, 5701
TauI GCSGC 3 cut(s) 1278, 1855, 4927
TspGWI ACGGA 8 cut(s) 156, 1074, 1370, 2067, 2376, 2940, 3345, 3708
TspMI CCCGGG 1 cut(s) 1633
VneI GTGCAC 1 cut(s) 3847
VpaK11BI GGWCC 4 cut(s) 717, 2484, 2923, 4049
XagI CCTNNNNNAGG 1 cut(s) 4346
XbaI TCTAGA 1 cut(s) 3919
XcmI CCANNNNNNNNNTGG 1 cut(s) 2032
XmaI CCCGGG 1 cut(s) 1633
XmiI GTMKAC 4 cut(s) 804, 1545, 3166, 4975
XmnI GAANNNNTTC 5 cut(s) 932, 1730, 3416, 5190, 5244
ZraI GACGTC 1 cut(s) 2410
ZrmI AGTACT 3 cut(s) 918, 2386, 4683
Zsp2I ATGCAT 2 cut(s) 318, 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.