Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0008570

Physical Location & Seq

Genomic Coordinates Forward (+)

7903231 .. 7907823

Gene Structure 4593 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGGACTGTGTCATGGCCTTGGCCCTGCAGATTGTCGGCTTGAAGTTTGTGGGAGAGGCTGCTGACGTGTCCACACTTTTCAAAAGCCAGGGAAACAACAGTCTTCCACACAACACACATTACAGAGAAATCGCCGCCGGCAATTCCGATACGCTGGTCGCCGCTGCTGCTAAATCCGCCACGTGTCCCCCTAGCTCTCTCCCTACTCTATTTGATCCCAACTCTCGGGCCCCGCGCCATTTATCCGGCGACCTAACGGCACCGTATTCGACACAAGCTCCCAGGCGAACTCCACTCAGCTACACTCTTCCCCATCGTGCTATGGCCGAAACGACGCCGTTGCCGGGCGCTCCGCAGCCGAGCAAGCTGTGGAAAGGGGTTTTCGCGGTGGCCGGCATCATGACCACGCTCGTCACCTACGGCGTTCTCCAGGAGAAGATCATGAGAGTGCCGTACGGCGACGACAAGGCGTTTTTCAAGTACTCGCTTTTCCTCGTCTTCTGCAACCGCATCATGACGTCGGCGGTCTCCGCCGGTGCTTTGTTGGCGAGAAAGAAGGCTCTGGATCCCGTCGCTCCGGTTCACAAGTACTGCCTTGTATCGATTTCGAACATACTAACGACTACATGTCAATATGAGGCTCTCAAATATGTCAGCTTTCCGGTTCAAACGCTTGCGAAATGCGCCAAGATGATACCTGTGATGGTTTGGGGCACTATCATTATGCAAAAGAAATATAGGGGACCGGACTATTTTTTGGCATTTCTAGTGACAGTGGGCTGTTCAATATTCATTCTATATCCGGCAGGATCTGCTGACATTGGTCCATCTGATATATACGGTAGAGGAAGAGAAAATACCATTTGGGGCATTTCCCTTATGGTTGGTTATCTTGGGTTTGATGGATTTACAAGCACATTCCAAGATAAGCTGTTTAAGGGCTATGATATGGAGATACACAATCAAATATTTTACACCACTTTCTGTTCTTGTGTTCTCAGCCTGACAGGTCTTCTATTACAAGGTCAACTTCTGCCAGCAATTCATTTTGTTTCTAGCCACAATGATTGTTTCTTCGACATTGCATTGCTTTCCACCGTAGCAACAGCGAGCCAGTTTTTTATTTCTTACACAATTCGCACTTTTGGTGCTCTCACATTTGCCACAATAATGACCACAAGACAGCTGGCCAGCATTTTGCTATCGTGCCTGTGGTTTTCGCACCCCCTTAGCTGGGAACAGTGGATGGGAGCTGTTGTTGTCTTTGGTTCCCTATATGCGAAAAGCTTCATGAGAACGAAGCCTTCACCTTCCCAACAAATTCAGAATGGAGCTTTGAGTCCAGTGAAGGGGATCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0006810 GO:0006811 GO:0006820 GO:0006862 GO:0008150 GO:0008509 GO:0008514 GO:0012505 GO:0015075 GO:0015215 GO:0015216 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0022857 GO:0030173 GO:0030176 GO:0031090 GO:0031224 GO:0031227 GO:0031228 GO:0031300 GO:0031301 GO:0031984 GO:0034220 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046963 GO:0046964 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0071702 GO:0071705 GO:0072348 GO:0072530 GO:0098588 GO:0098656 GO:0098791 GO:0098827 GO:1901264 GO:1901505 GO:1901679 GO:1901682 GO:1902559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UAA

Protein Analysis

454

Amino Acids

49.57

Weight (kDa)

9.13

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UAA	PF08449	126 - 429	6e-81	UAA transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46180 AT3G46180 AT5G59740
fragaria_vesca	FvH4_3g34850 FvH4_3g34850 FvH4_3g34850 FvH4_3g34850
malus_domestica	MD03G1100700.v1.1 MD05G1008500.v1.1 MD11G1114800.v1.1
prunus_persica	Prupe.6G085700_v2.0.a1
pyrus_communis	pycom03g08280 pycom11g09640
rosa_chinensis	RchiOBHm_Chr5g0062701
rosa_laevigata	RLG00000035573
rosa_multiflora	Rmu_ssc0000472.1_g000021
rosa_roxburghii	Rroxscaffold_1G00017930
rosa_rugosa	Rorug05G0351000
rosa_samantha	Rh5AG412000 Rh5BG426000 Rh5CG450100 Rh5DG439900
rosa_wichuraiana	Rw5G038730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	521
AccB1I	GGYRCC	1 cut(s)	259
AccII	CGCG	2 cut(s)	235, 386
AciI	CCGC	9 cut(s)	135, 162, 177, 233, 353, 386, 508, 524, 531
AclWI	GGATC	6 cut(s)	209, 560, 573, 817, 1348, 1361
AcoI	YGGCCR	3 cut(s)	324, 390, 1188
AcsI	RAATTY	1 cut(s)	1320
AcvI	CACGTG	1 cut(s)	183
AcyI	GRCGYC	2 cut(s)	335, 518
AfaI	GTAC	3 cut(s)	455, 482, 590
AfiI	CCNNNNNNNGG	5 cut(s)	225, 344, 1233, 1234, 1349
AflIII	ACRYGT	3 cut(s)	66, 182, 626
AgsI	TTSAA	5 cut(s)	43, 82, 478, 668, 786
AhdI	GACNNNNNGTC	1 cut(s)	627
AjiI	CACGTC	1 cut(s)	67
AjnI	CCWGG	3 cut(s)	87, 281, 429
Alw21I	GWGCWC	1 cut(s)	1153
Alw26I	GTCTC	1 cut(s)	532
AlwI	GGATC	6 cut(s)	209, 560, 573, 817, 1348, 1361
AlwNI	CAGNNNCTG	1 cut(s)	812
Ama87I	CYCGRG	1 cut(s)	225
AoxI	GGCC	6 cut(s)	15, 21, 228, 324, 390, 1188
ApaI	GGGCCC	1 cut(s)	232
ApeKI	GCWGC	4 cut(s)	59, 164, 167, 355
ApoI	RAATTY	1 cut(s)	1320
Asp700I	GAANNNNTTC	1 cut(s)	1286
AspLEI	GCGC	3 cut(s)	237, 350, 686
AspS9I	GGNCC	5 cut(s)	22, 228, 229, 743, 824
AsuC2I	CCSGG	1 cut(s)	345
AsuHPI	GGTGA	2 cut(s)	406, 1299
AsuII	TTCGAA	1 cut(s)	608
AvaI	CYCGRG	1 cut(s)	225
AvaII	GGWCC	2 cut(s)	743, 824
BaeGI	GKGCMC	2 cut(s)	232, 716
BaeI	ACNNNNGTAYC	2 cut(s)	141, 174
BalI	TGGCCA	1 cut(s)	1190
BamHI	GGATCC	2 cut(s)	565, 1353
BanI	GGYRCC	1 cut(s)	259
BanII	GRGCYC	1 cut(s)	232
BarI	GAAGNNNNNNTAC	2 cut(s)	841, 873
BbrPI	CACGTG	1 cut(s)	183
BbsI	GAAGAC	3 cut(s)	95, 490, 1004
Bbv12I	GWGCWC	1 cut(s)	1153
BbvI	GCAGC	4 cut(s)	46, 151, 154, 367
BccI	CCATC	5 cut(s)	321, 697, 835, 896, 1240
BceAI	ACGGC	5 cut(s)	273, 322, 436, 436, 472
BcgI	CGANNNNNNTGC	4 cut(s)	249, 283, 322, 356
BciT130I	CCWGG	3 cut(s)	89, 283, 431
BcnI	CCSGG	1 cut(s)	345
BcoDI	GTCTC	1 cut(s)	532
BfaI	CTAG	3 cut(s)	192, 767, 1056
BfmI	CTRYAG	1 cut(s)	26
BfoI	RGCGCY	1 cut(s)	351
BisI	GCNGC	6 cut(s)	60, 135, 162, 165, 168, 356
BlsI	GCNGC	6 cut(s)	61, 136, 163, 166, 169, 357
BmcAI	AGTACT	2 cut(s)	482, 590
Bme1390I	CCNGG	4 cut(s)	89, 283, 345, 431
Bme18I	GGWCC	2 cut(s)	743, 824
BmeRI	GACNNNNNGTC	1 cut(s)	627
BmeT110I	CYCGRG	1 cut(s)	225
BmgBI	CACGTC	1 cut(s)	67
BmgT120I	GGNCC	5 cut(s)	22, 228, 229, 743, 824
BmiI	GGNNCC	7 cut(s)	230, 231, 261, 567, 744, 1270, 1355
BmrFI	CCNGG	4 cut(s)	89, 283, 345, 431
BmsI	GCATC	2 cut(s)	405, 519
BoxI	GACNNNNGTC	1 cut(s)	822
BpiI	GAAGAC	3 cut(s)	95, 490, 1004
BpmI	CTGGAG	1 cut(s)	413
Bpu10I	CCTNAGC	1 cut(s)	1229
Bpu14I	TTCGAA	1 cut(s)	608
BpuMI	CCSGG	1 cut(s)	345
Bsa29I	ATCGAT	1 cut(s)	602
BsaAI	YACGTR	1 cut(s)	183
BsaHI	GRCGYC	2 cut(s)	335, 518
BsaI	GGTCTC	1 cut(s)	532
BsaJI	CCNNGG	3 cut(s)	18, 88, 281
BsaWI	WCCGGW	3 cut(s)	577, 661, 745
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 292, 1242, 1272
Bsc4I	CCNNNNNNNGG	5 cut(s)	225, 344, 1233, 1234, 1349
Bse118I	RCCGGY	3 cut(s)	137, 392, 533
Bse1I	ACTGG	2 cut(s)	1114, 1343
Bse3DI	GCAATG	2 cut(s)	1080, 1085
BseBI	CCWGG	3 cut(s)	89, 283, 431
BseCI	ATCGAT	1 cut(s)	602
BseDI	CCNNGG	3 cut(s)	18, 88, 281
BseGI	GGATG	1 cut(s)	1251
BseLI	CCNNNNNNNGG	5 cut(s)	225, 344, 1233, 1234, 1349
BseMI	GCAATG	2 cut(s)	1080, 1085
BseMII	CTCAG	2 cut(s)	310, 1012
BseNI	ACTGG	2 cut(s)	1114, 1343
BseSI	GKGCMC	2 cut(s)	232, 716
BseXI	GCAGC	4 cut(s)	46, 151, 154, 367
BseYI	CCCAGC	1 cut(s)	1233
Bsh1236I	CGCG	2 cut(s)	235, 386
BshFI	GGCC	6 cut(s)	17, 23, 230, 326, 392, 1190
BshNI	GGYRCC	1 cut(s)	259
BshVI	ATCGAT	1 cut(s)	602
BsiHKAI	GWGCWC	1 cut(s)	1153
BsiHKCI	CYCGRG	1 cut(s)	225
BsiSI	CCGG	9 cut(s)	138, 246, 344, 393, 534, 578, 662, 746, 803
BsiWI	CGTACG	1 cut(s)	453
BslFI	GGGAC	2 cut(s)	171, 756
BslI	CCNNNNNNNGG	5 cut(s)	225, 344, 1233, 1234, 1349
BsmAI	GTCTC	1 cut(s)	532
BsmFI	GGGAC	2 cut(s)	171, 756
BsnI	GGCC	6 cut(s)	17, 23, 230, 326, 392, 1190
Bso31I	GGTCTC	1 cut(s)	532
BsoBI	CYCGRG	1 cut(s)	225
Bsp119I	TTCGAA	1 cut(s)	608
Bsp120I	GGGCCC	1 cut(s)	228
Bsp1286I	GDGCHC	3 cut(s)	232, 716, 1153
Bsp143I	GATC	5 cut(s)	214, 438, 565, 809, 1353
BspACI	CCGC	9 cut(s)	135, 162, 177, 233, 353, 386, 508, 524, 531
BspANI	GGCC	6 cut(s)	17, 23, 230, 326, 392, 1190
BspCNI	CTCAG	2 cut(s)	309, 1011
BspDI	ATCGAT	1 cut(s)	602
BspFNI	CGCG	2 cut(s)	235, 386
BspHI	TCATGA	4 cut(s)	399, 441, 513, 1290
BspLI	GGNNCC	7 cut(s)	230, 231, 261, 567, 744, 1270, 1355
BspMAI	CTGCAG	1 cut(s)	30
BspPI	GGATC	6 cut(s)	209, 560, 573, 817, 1348, 1361
BspT104I	TTCGAA	1 cut(s)	608
BspT107I	GGYRCC	1 cut(s)	259
BspTNI	GGTCTC	1 cut(s)	532
BsrDI	GCAATG	2 cut(s)	1080, 1085
BsrFI	RCCGGY	3 cut(s)	137, 392, 533
BsrI	ACTGG	2 cut(s)	1114, 1343
BssAI	RCCGGY	3 cut(s)	137, 392, 533
BssECI	CCNNGG	3 cut(s)	18, 88, 281
BssMI	GATC	5 cut(s)	214, 438, 565, 809, 1353
BssNI	GRCGYC	2 cut(s)	335, 518
BssT1I	CCWWGG	1 cut(s)	18
Bst2UI	CCWGG	3 cut(s)	89, 283, 431
Bst4CI	ACNGT	7 cut(s)	8, 101, 264, 775, 842, 1099, 1242
Bst6I	CTCTTC	2 cut(s)	312, 844
BstACI	GRCGYC	2 cut(s)	335, 518
BstAPI	GCANNNNNTGC	1 cut(s)	812
BstBAI	YACGTR	1 cut(s)	183
BstBI	TTCGAA	1 cut(s)	608
BstC8I	GCNNGC	8 cut(s)	139, 365, 394, 675, 1038, 1111, 1188, 1192
BstDEI	CTNAG	3 cut(s)	296, 998, 1229
BstF5I	GGATG	1 cut(s)	1251
BstFNI	CGCG	2 cut(s)	235, 386
BstH2I	RGCGCY	1 cut(s)	351
BstHHI	GCGC	3 cut(s)	237, 350, 686
BstKTI	GATC	5 cut(s)	217, 441, 568, 812, 1356
BstMAI	GTCTC	1 cut(s)	532
BstMBI	GATC	5 cut(s)	214, 438, 565, 809, 1353
BstMWI	GCNNNNNNNGC	7 cut(s)	167, 176, 364, 530, 545, 683, 812
BstNI	CCWGG	3 cut(s)	89, 283, 431
BstNSI	RCATGY	1 cut(s)	630
BstPAI	GACNNNNGTC	1 cut(s)	822
BstSCI	CCNGG	4 cut(s)	87, 281, 343, 429
BstSFI	CTRYAG	1 cut(s)	26
BstSLI	GKGCMC	2 cut(s)	232, 716
BstUI	CGCG	2 cut(s)	235, 386
BstV1I	GCAGC	4 cut(s)	46, 151, 154, 367
BstV2I	GAAGAC	3 cut(s)	95, 490, 1004
BstX2I	RGATCY	3 cut(s)	565, 809, 1353
BstYI	RGATCY	3 cut(s)	565, 809, 1353
Bsu15I	ATCGAT	1 cut(s)	602
BsuRI	GGCC	6 cut(s)	17, 23, 230, 326, 392, 1190
BsuTUI	ATCGAT	1 cut(s)	602
BtrI	CACGTC	1 cut(s)	67
BtsCI	GGATG	1 cut(s)	1251
BtsIMutI	CAGTG	3 cut(s)	780, 1247, 1350
Cac8I	GCNNGC	8 cut(s)	139, 365, 394, 675, 1038, 1111, 1188, 1192
CaiI	CAGNNNCTG	1 cut(s)	812
CciI	TCATGA	4 cut(s)	399, 441, 513, 1290
CfoI	GCGC	3 cut(s)	237, 350, 686
Cfr10I	RCCGGY	3 cut(s)	137, 392, 533
Cfr13I	GGNCC	5 cut(s)	22, 228, 229, 743, 824
ClaI	ATCGAT	1 cut(s)	602
CseI	GACGC	1 cut(s)	343
Csp6I	GTAC	3 cut(s)	454, 481, 589
CspCI	CAANNNNNGTGG	2 cut(s)	1049, 1084
CviAII	CATG	6 cut(s)	13, 400, 442, 514, 627, 1291
CviQI	GTAC	3 cut(s)	454, 481, 589
DdeI	CTNAG	3 cut(s)	296, 998, 1229
DpnI	GATC	5 cut(s)	216, 440, 567, 811, 1355
DpnII	GATC	5 cut(s)	214, 438, 565, 809, 1353
DriI	GACNNNNNGTC	1 cut(s)	627
EaeI	YGGCCR	3 cut(s)	324, 390, 1188
Eam1104I	CTCTTC	2 cut(s)	312, 844
Eam1105I	GACNNNNNGTC	1 cut(s)	627
EarI	CTCTTC	2 cut(s)	312, 844
EciI	GGCGGA	2 cut(s)	166, 520
Eco130I	CCWWGG	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	232
Eco31I	GGTCTC	1 cut(s)	532
Eco47I	GGWCC	2 cut(s)	743, 824
Eco72I	CACGTG	1 cut(s)	183
Eco88I	CYCGRG	1 cut(s)	225
EcoO109I	RGGNCCY	1 cut(s)	229
EcoRII	CCWGG	3 cut(s)	87, 281, 429
EcoT14I	CCWWGG	1 cut(s)	18
EcoT38I	GRGCYC	1 cut(s)	232
ErhI	CCWWGG	1 cut(s)	18
FaeI	CATG	6 cut(s)	16, 403, 445, 517, 630, 1294
FalI	AAGNNNNNCTT	2 cut(s)	1014, 1046
FaqI	GGGAC	2 cut(s)	171, 756
FatI	CATG	6 cut(s)	12, 399, 441, 513, 626, 1290
FauI	CCCGC	1 cut(s)	240
Fnu4HI	GCNGC	6 cut(s)	60, 135, 162, 165, 168, 356
FokI	GGATG	1 cut(s)	1258
FriOI	GRGCYC	1 cut(s)	232
Fsp4HI	GCNGC	6 cut(s)	60, 135, 162, 165, 168, 356
FspBI	CTAG	3 cut(s)	192, 767, 1056
GlaI	GCGC	3 cut(s)	236, 349, 685
GluI	GCNGC	6 cut(s)	60, 135, 162, 165, 168, 356
GsaI	CCCAGC	1 cut(s)	1237
GsuI	CTGGAG	1 cut(s)	413
HaeII	RGCGCY	1 cut(s)	351
HaeIII	GGCC	6 cut(s)	17, 23, 230, 326, 392, 1190
HapII	CCGG	9 cut(s)	138, 246, 344, 393, 534, 578, 662, 746, 803
HgaI	GACGC	1 cut(s)	343
HhaI	GCGC	3 cut(s)	237, 350, 686
Hin1I	GRCGYC	2 cut(s)	335, 518
Hin1II	CATG	6 cut(s)	16, 403, 445, 517, 630, 1294
Hin6I	GCGC	3 cut(s)	235, 348, 684
HinP1I	GCGC	3 cut(s)	235, 348, 684
HincII	GTYRAC	1 cut(s)	1028
HindII	GTYRAC	1 cut(s)	1028
HindIII	AAGCTT	1 cut(s)	1285
HinfI	GANTC	1 cut(s)	1339
HpaII	CCGG	9 cut(s)	138, 246, 344, 393, 534, 578, 662, 746, 803
HphI	GGTGA	2 cut(s)	406, 1299
Hpy166II	GTNNAC	3 cut(s)	72, 583, 1028
Hpy188I	TCNGA	3 cut(s)	148, 832, 1326
Hpy188III	TCNNGA	5 cut(s)	400, 442, 514, 563, 1291
Hpy8I	GTNNAC	3 cut(s)	72, 583, 1028
Hpy99I	CGWCG	4 cut(s)	337, 464, 523, 575
HpyAV	CCTTC	4 cut(s)	550, 1314, 1320, 1342
HpyCH4III	ACNGT	7 cut(s)	8, 101, 264, 775, 842, 1099, 1242
HpyCH4IV	ACGT	3 cut(s)	66, 182, 518
HpyCH4V	TGCA	4 cut(s)	28, 504, 727, 1085
HpyF10VI	GCNNNNNNNGC	7 cut(s)	167, 176, 364, 530, 545, 683, 812
HpyF3I	CTNAG	3 cut(s)	296, 998, 1229
HpySE526I	ACGT	3 cut(s)	66, 182, 518
Hsp92I	GRCGYC	2 cut(s)	335, 518
Hsp92II	CATG	6 cut(s)	16, 403, 445, 517, 630, 1294
HspAI	GCGC	3 cut(s)	235, 348, 684
KroI	GCCGGC	2 cut(s)	137, 392
KroNI	GCCGGC	2 cut(s)	139, 394
Kzo9I	GATC	5 cut(s)	214, 438, 565, 809, 1353
LmnI	GCTCC	5 cut(s)	283, 355, 580, 1250, 1331
Lsp1109I	GCAGC	4 cut(s)	46, 151, 154, 367
LweI	GCATC	2 cut(s)	405, 519
MaeI	CTAG	3 cut(s)	192, 767, 1056
MaeII	ACGT	3 cut(s)	66, 182, 518
MaeIII	GTNAC	2 cut(s)	412, 769
MalI	GATC	5 cut(s)	216, 440, 567, 811, 1355
MboI	GATC	5 cut(s)	214, 438, 565, 809, 1353
MboII	GAAGA	7 cut(s)	95, 299, 448, 490, 861, 1004, 1066
MflI	RGATCY	3 cut(s)	565, 809, 1353
MhlI	GDGCHC	3 cut(s)	232, 716, 1153
MlsI	TGGCCA	1 cut(s)	1190
MluCI	AATT	4 cut(s)	142, 1041, 1134, 1320
MluNI	TGGCCA	1 cut(s)	1190
MlyI	GAGTC	1 cut(s)	1348
MnlI	CCTC	4 cut(s)	49, 503, 631, 839
Mox20I	TGGCCA	1 cut(s)	1190
MroNI	GCCGGC	2 cut(s)	137, 392
MroXI	GAANNNNTTC	1 cut(s)	1286
MscI	TGGCCA	1 cut(s)	1190
MseI	TTAA	1 cut(s)	936
MslI	CAYNNNNRTG	2 cut(s)	446, 1169
Msp20I	TGGCCA	1 cut(s)	1190
MspA1I	CMGCKG	2 cut(s)	164, 1186
MspI	CCGG	9 cut(s)	138, 246, 344, 393, 534, 578, 662, 746, 803
MspR9I	CCNGG	4 cut(s)	89, 283, 345, 431
MvaI	CCWGG	3 cut(s)	89, 283, 431
MvnI	CGCG	2 cut(s)	235, 386
MwoI	GCNNNNNNNGC	7 cut(s)	167, 176, 364, 530, 545, 683, 812
NaeI	GCCGGC	2 cut(s)	139, 394
NciI	CCSGG	1 cut(s)	345
NdeII	GATC	5 cut(s)	214, 438, 565, 809, 1353
NgoMIV	GCCGGC	2 cut(s)	137, 392
NlaIII	CATG	6 cut(s)	16, 403, 445, 517, 630, 1294
NlaIV	GGNNCC	7 cut(s)	230, 231, 261, 567, 744, 1270, 1355
NmeAIII	GCCGAG	1 cut(s)	384
NmuCI	GTSAC	2 cut(s)	412, 769
NspI	RCATGY	1 cut(s)	630
NspV	TTCGAA	1 cut(s)	608
PagI	TCATGA	4 cut(s)	399, 441, 513, 1290
PciI	ACATGT	1 cut(s)	626
PdiI	GCCGGC	2 cut(s)	139, 394
PdmI	GAANNNNTTC	1 cut(s)	1286
Pfl23II	CGTACG	1 cut(s)	453
PflFI	GACNNNGTC	1 cut(s)	8
PfoI	TCCNGGA	1 cut(s)	429
PkrI	GCNGC	6 cut(s)	61, 136, 163, 166, 169, 357
PleI	GAGTC	1 cut(s)	1347
PmaCI	CACGTG	1 cut(s)	183
PmlI	CACGTG	1 cut(s)	183
PpsI	GAGTC	1 cut(s)	1347
Ppu21I	YACGTR	1 cut(s)	183
PscI	ACATGT	1 cut(s)	626
PshAI	GACNNNNGTC	1 cut(s)	822
Psp6I	CCWGG	3 cut(s)	87, 281, 429
PspCI	CACGTG	1 cut(s)	183
PspFI	CCCAGC	1 cut(s)	1233
PspGI	CCWGG	3 cut(s)	87, 281, 429
PspLI	CGTACG	1 cut(s)	453
PspN4I	GGNNCC	7 cut(s)	230, 231, 261, 567, 744, 1270, 1355
PspOMI	GGGCCC	1 cut(s)	228
PspPI	GGNCC	5 cut(s)	22, 228, 229, 743, 824
PstI	CTGCAG	1 cut(s)	30
PstNI	CAGNNNCTG	1 cut(s)	812
PsuI	RGATCY	3 cut(s)	565, 809, 1353
PsyI	GACNNNGTC	1 cut(s)	8
PvuII	CAGCTG	1 cut(s)	1186
RsaI	GTAC	3 cut(s)	455, 482, 590
RsaNI	GTAC	3 cut(s)	454, 481, 589
RseI	CAYNNNNRTG	2 cut(s)	446, 1169
SaqAI	TTAA	1 cut(s)	936
SatI	GCNGC	6 cut(s)	60, 135, 162, 165, 168, 356
Sau3AI	GATC	5 cut(s)	214, 438, 565, 809, 1353
Sau96I	GGNCC	5 cut(s)	22, 228, 229, 743, 824
ScaI	AGTACT	2 cut(s)	482, 590
SchI	GAGTC	1 cut(s)	1348
ScrFI	CCNGG	4 cut(s)	89, 283, 345, 431
SduI	GDGCHC	3 cut(s)	232, 716, 1153
SfaNI	GCATC	2 cut(s)	405, 519
SfcI	CTRYAG	1 cut(s)	26
SfuI	TTCGAA	1 cut(s)	608
SgrAI	CRCCGGYG	1 cut(s)	533
SinI	GGWCC	2 cut(s)	743, 824
SmiMI	CAYNNNNRTG	2 cut(s)	446, 1169
Sse9I	AATT	4 cut(s)	142, 1041, 1134, 1320
SsiI	CCGC	9 cut(s)	135, 162, 177, 233, 353, 386, 508, 524, 531
SspI	AATATT	2 cut(s)	789, 969
SspMI	CTAG	3 cut(s)	192, 767, 1056
StyD4I	CCNGG	4 cut(s)	87, 281, 343, 429
StyI	CCWWGG	1 cut(s)	18
TaaI	ACNGT	7 cut(s)	8, 101, 264, 775, 842, 1099, 1242
TaiI	ACGT	3 cut(s)	69, 185, 521
TaqI	TCGA	4 cut(s)	269, 602, 608, 1077
TasI	AATT	4 cut(s)	142, 1041, 1134, 1320
TatI	WGTACW	2 cut(s)	480, 588
TauI	GCSGC	2 cut(s)	137, 164
Tru1I	TTAA	1 cut(s)	936
Tru9I	TTAA	1 cut(s)	936
TscAI	CASTG	3 cut(s)	780, 1247, 1350
TseFI	GTSAC	2 cut(s)	412, 769
TseI	GCWGC	4 cut(s)	59, 164, 167, 355
Tsp45I	GTSAC	2 cut(s)	412, 769
TspDTI	ATGAA	3 cut(s)	781, 1034, 1279
TspRI	CASTG	3 cut(s)	780, 1247, 1350
Tth111I	GACNNNGTC	1 cut(s)	8
VpaK11BI	GGWCC	2 cut(s)	743, 824
XapI	RAATTY	1 cut(s)	1320
XceI	RCATGY	1 cut(s)	630
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1183
XmnI	GAANNNNTTC	1 cut(s)	1286
XspI	CTAG	3 cut(s)	192, 767, 1056
ZraI	GACGTC	1 cut(s)	519
ZrmI	AGTACT	2 cut(s)	482, 590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.