Rmu_ssc0000472.1_g000021

UDP-galactose UDP-glucose transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000472.1
Physical Location & Seq
Forward (+)
109611 .. 117687
8077 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000472.1_g000021.1.cds

Sequence Viewer

Length: 1887 bp
atggccgaaacgacgtcgctcgacggtccgcgagagcgcagcaggctatggaaaggggttttcgccgtgaccggaatcatgaccacgctcgtcacctacggcgttctacaggagaagatcatgagagtgccttacggggaagaccatgcctttttcaagtactcattgtttctggttctctgcaatcgaatcacaacgtcggcgatttccgccggagctttaatctcaagtaaaaaggctttgaatccggtagctccgttttacaaatacggccttgtatcagttaccaatatactaaccactacatgtcagtatgaggccctcaagtatgtaagctttcctgttcaaacacttgcaaaatgtgccaagatgatacctgttatgaatcactgtcccgtgaatcggggggccatggccgaaacgacgtcgctcgacggtccgcgagagcgcagcaggctatggaaaggggttttcgccgtgaccggaatcatgaccacgctcgtcacctacggcgttctacaggagaagatcatgagagtgccttacggggaagaccatgcctttttcaagtactcattgtttctggttctctgcaatcgaatcacaacgtcggcgatttccgccggagctttaatctcaagtaaaaaggctttgaatccggtagctccgttttacaaatacggccttgtatcagttaccaatatactaaccactacatgtcagtatgaggccctcaagtatgtaagctttcctgttcaaacacttgcaaaatgtgccaagatgatacctgttatgaatcactgtcccgtgaatcggggggccatggccgaaacgacgtcgctcgacggtccgcgagagcgcagcaggctatggaaaggggttttcgccgtgaccggaatcatgaccacgctcgtcacctacggcgttctacaggttccgattttctctcacgagaagatcatgagagtgccttacggggaagaccatgcctttttcaagtactcattgtttctggttctctgcaatcgaatcacaacgtcggcgatttccgccggagctttaatctcaagtaaaaaggctttgaatccggtagctccgttttacaaatacggccttgtatcagttaccaatatactaaccactacatgtcagtatgaggccctcaagtatgtaagctttcctgttcaaacacttgcaaaatgtgccaagatgatacctgttatggtttggggtaccatcattatgcaaaagaaatacaaggggcgtgactatttgtttgctgttctagttacagttggctgttcaatatttatactatatccggcagggtctgacttgggcccaactgatgcatttggtagagcaagagaaaatactatgtggggcgtctctcttatgatcggttaccttgggtttgatggctttacaagcacattccaagacaaactttttaaaggttatgatatggagatacacaatcaaatattctacacaacgttctgttcttgtgttcttagcttgagcggtctcatattacaaggacaactggttccagcaatacaatttgtttctagccacaatgattgtttctttgacatcgcactgctttcgactgtagcaacagctagccaatttttcatttcttacacaattcgcacatttggtgctctaacgtttgccactataatgaccacaagacagttggtcagcattatgctatcatgcgtgtggtttcatcacccgcttagctgggaacagtggattggagctgtggttgtctttggttccctatatgcaaaaacgtttatgagaaatgcaactccaaatccgtccccgtcagacaaagtgcaggatggaccttctagcccagtaaaggggatcccttga

Protein Analysis

628

Amino Acids

69.49

Weight (kDa)

9.36

Isoelectric Point (pI)

31.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 17, 428, 839
Acc65I GGTACC 1 cut(s) 1232
AccB1I GGYRCC 1 cut(s) 1232
AccBSI CCGCTC 1 cut(s) 1524
AccII CGCG 3 cut(s) 31, 442, 853
AciI CCGC 8 cut(s) 29, 210, 440, 621, 851, 1050, 1524, 1742
AclI AACGTT 3 cut(s) 1496, 1673, 1802
AclWI GGATC 2 cut(s) 1873, 1886
AcoI YGGCCR 3 cut(s) 3, 414, 825
AcyI GRCGYC 4 cut(s) 14, 425, 836, 1386
AfaI GTAC 4 cut(s) 161, 572, 1001, 1234
AfiI CCNNNNNNNGG 4 cut(s) 402, 813, 1873, 1874
AflIII ACRYGT 3 cut(s) 305, 716, 1145
AhdI GACNNNNNGTC 1 cut(s) 1703
AjuI GAANNNNNNNTTGG 2 cut(s) 1746, 1778
AloI GAACNNNNNNTCC 2 cut(s) 1533, 1565
Alw21I GWGCWC 1 cut(s) 1669
Alw26I GTCTC 2 cut(s) 1393, 1532
AlwI GGATC 2 cut(s) 1873, 1886
AlwNI CAGNNNCTG 1 cut(s) 1331
ApaI GGGCCC 1 cut(s) 1343
ApeKI GCWGC 3 cut(s) 39, 450, 861
ArsI GACNNNNNNTTYG 2 cut(s) 1259, 1291
Asp718I GGTACC 1 cut(s) 1232
AspLEI GCGC 3 cut(s) 39, 450, 861
AsuHPI GGTGA 4 cut(s) 85, 496, 907, 1730
AsuNHI GCTAGC 1 cut(s) 1625
AvaII GGWCC 4 cut(s) 26, 437, 848, 1856
BaeGI GKGCMC 1 cut(s) 1343
BamHI GGATCC 1 cut(s) 1878
BanI GGYRCC 1 cut(s) 1232
BanII GRGCYC 1 cut(s) 1343
BauI CACGAG 1 cut(s) 950
BbsI GAAGAC 3 cut(s) 147, 558, 987
Bbv12I GWGCWC 1 cut(s) 1669
BbvI GCAGC 3 cut(s) 51, 462, 873
BccI CCATC 3 cut(s) 1244, 1412, 1847
BceAI ACGGC 9 cut(s) 50, 115, 286, 461, 526, 697, 872, 937, 1126
BcgI CGANNNNNNTGC 2 cut(s) 1590, 1624
BcoDI GTCTC 2 cut(s) 1393, 1532
BfaI CTAG 4 cut(s) 1286, 1572, 1626, 1863
BfmI CTRYAG 4 cut(s) 107, 518, 929, 1614
BisI GCNGC 3 cut(s) 40, 451, 862
BlpI GCTNAGC 1 cut(s) 1745
BlsI GCNGC 3 cut(s) 41, 452, 863
BmcAI AGTACT 3 cut(s) 161, 572, 1001
Bme18I GGWCC 4 cut(s) 26, 437, 848, 1856
BmeRI GACNNNNNGTC 1 cut(s) 1703
BmiI GGNNCC 8 cut(s) 409, 820, 936, 1234, 1341, 1551, 1786, 1880
BmrI ACTGGG 1 cut(s) 1862
BmsI GCATC 1 cut(s) 1339
BmtI GCTAGC 1 cut(s) 1629
BmuI ACTGGG 1 cut(s) 1862
BpiI GAAGAC 3 cut(s) 147, 558, 987
Bpu1102I GCTNAGC 1 cut(s) 1745
BpuEI CTTGAG 7 cut(s) 211, 308, 622, 719, 1051, 1148, 1540
BsaHI GRCGYC 4 cut(s) 14, 425, 836, 1386
BsaI GGTCTC 1 cut(s) 1532
BsaJI CCNNGG 3 cut(s) 411, 822, 1408
BsaWI WCCGGW 6 cut(s) 71, 247, 482, 658, 893, 1087
BsaXI ACNNNNNCTCC 2 cut(s) 1758, 1788
Bsc4I CCNNNNNNNGG 4 cut(s) 402, 813, 1873, 1874
Bse1I ACTGG 2 cut(s) 1551, 1868
BseDI CCNNGG 3 cut(s) 411, 822, 1408
BseGI GGATG 1 cut(s) 1858
BseLI CCNNNNNNNGG 4 cut(s) 402, 813, 1873, 1874
BseNI ACTGG 2 cut(s) 1551, 1868
BseSI GKGCMC 1 cut(s) 1343
BseXI GCAGC 3 cut(s) 51, 462, 873
BseYI CCCAGC 1 cut(s) 1749
BsgI GTGCAG 1 cut(s) 1868
Bsh1236I CGCG 3 cut(s) 31, 442, 853
BshNI GGYRCC 1 cut(s) 1232
BsiHKAI GWGCWC 1 cut(s) 1669
BslFI GGGAC 3 cut(s) 378, 789, 1816
BslI CCNNNNNNNGG 4 cut(s) 402, 813, 1873, 1874
BsmAI GTCTC 2 cut(s) 1393, 1532
BsmBI CGTCTC 1 cut(s) 1393
BsmFI GGGAC 3 cut(s) 378, 789, 1816
Bso31I GGTCTC 1 cut(s) 1532
Bsp120I GGGCCC 1 cut(s) 1339
Bsp1286I GDGCHC 2 cut(s) 1343, 1669
Bsp143I GATC 5 cut(s) 117, 528, 957, 1398, 1878
Bsp1720I GCTNAGC 1 cut(s) 1745
Bsp19I CCATGG 2 cut(s) 411, 822
BspACI CCGC 8 cut(s) 29, 210, 440, 621, 851, 1050, 1524, 1742
BspFNI CGCG 3 cut(s) 31, 442, 853
BspHI TCATGA 6 cut(s) 78, 120, 489, 531, 900, 960
BspLI GGNNCC 8 cut(s) 409, 820, 936, 1234, 1341, 1551, 1786, 1880
BspOI GCTAGC 1 cut(s) 1629
BspPI GGATC 2 cut(s) 1873, 1886
BspT107I GGYRCC 1 cut(s) 1232
BspTNI GGTCTC 1 cut(s) 1532
BsrBI CCGCTC 1 cut(s) 1524
BsrI ACTGG 2 cut(s) 1551, 1868
BssECI CCNNGG 3 cut(s) 411, 822, 1408
BssMI GATC 5 cut(s) 117, 528, 957, 1398, 1878
BssNI GRCGYC 4 cut(s) 14, 425, 836, 1386
BssSI CACGAG 1 cut(s) 950
BssT1I CCWWGG 3 cut(s) 411, 822, 1408
Bst2BI CACGAG 1 cut(s) 950
Bst4CI ACNGT 9 cut(s) 26, 392, 437, 803, 848, 1294, 1615, 1701, 1758
BstACI GRCGYC 4 cut(s) 14, 425, 836, 1386
BstAPI GCANNNNNTGC 3 cut(s) 362, 773, 1202
BstC8I GCNNGC 4 cut(s) 44, 455, 866, 1627
BstDEI CTNAG 2 cut(s) 1514, 1745
BstDSI CCRYGG 2 cut(s) 411, 822
BstEII GGTNACC 1 cut(s) 1403
BstF5I GGATG 1 cut(s) 1858
BstFNI CGCG 3 cut(s) 31, 442, 853
BstHHI GCGC 3 cut(s) 39, 450, 861
BstKTI GATC 5 cut(s) 120, 531, 960, 1401, 1881
BstMAI GTCTC 2 cut(s) 1393, 1532
BstMBI GATC 5 cut(s) 117, 528, 957, 1398, 1878
BstNSI RCATGY 3 cut(s) 309, 720, 1149
BstPI GGTNACC 1 cut(s) 1403
BstSFI CTRYAG 4 cut(s) 107, 518, 929, 1614
BstSLI GKGCMC 1 cut(s) 1343
BstUI CGCG 3 cut(s) 31, 442, 853
BstV1I GCAGC 3 cut(s) 51, 462, 873
BstV2I GAAGAC 3 cut(s) 147, 558, 987
BstX2I RGATCY 1 cut(s) 1878
BstYI RGATCY 1 cut(s) 1878
BtgI CCRYGG 2 cut(s) 411, 822
BtgZI GCGATG 1 cut(s) 1582
BtsCI GGATG 1 cut(s) 1858
BtsI GCAGTG 1 cut(s) 1601
BtsIMutI CAGTG 4 cut(s) 388, 799, 1601, 1763
Cac8I GCNNGC 4 cut(s) 44, 455, 866, 1627
CaiI CAGNNNCTG 1 cut(s) 1331
CciI TCATGA 6 cut(s) 78, 120, 489, 531, 900, 960
CfoI GCGC 3 cut(s) 39, 450, 861
CpoI CGGWCCG 3 cut(s) 26, 437, 848
CseI GACGC 1 cut(s) 1375
Csp6I GTAC 4 cut(s) 160, 571, 1000, 1233
CspCI CAANNNNNGTGG 2 cut(s) 1565, 1600
CspI CGGWCCG 3 cut(s) 26, 437, 848
CviQI GTAC 4 cut(s) 160, 571, 1000, 1233
DdeI CTNAG 2 cut(s) 1514, 1745
DpnI GATC 5 cut(s) 119, 530, 959, 1400, 1880
DpnII GATC 5 cut(s) 117, 528, 957, 1398, 1878
DraI TTTAAA 1 cut(s) 1453
DriI GACNNNNNGTC 1 cut(s) 1703
EaeI YGGCCR 3 cut(s) 3, 414, 825
Eam1105I GACNNNNNGTC 1 cut(s) 1703
EciI GGCGGA 3 cut(s) 199, 610, 1039
Eco130I CCWWGG 3 cut(s) 411, 822, 1408
Eco24I GRGCYC 1 cut(s) 1343
Eco31I GGTCTC 1 cut(s) 1532
Eco47I GGWCC 4 cut(s) 26, 437, 848, 1856
Eco91I GGTNACC 1 cut(s) 1403
EcoO109I RGGNCCY 3 cut(s) 319, 730, 1159
EcoO65I GGTNACC 1 cut(s) 1403
EcoT14I CCWWGG 3 cut(s) 411, 822, 1408
EcoT22I ATGCAT 1 cut(s) 1354
EcoT38I GRGCYC 1 cut(s) 1343
ErhI CCWWGG 3 cut(s) 411, 822, 1408
Esp3I CGTCTC 1 cut(s) 1393
FalI AAGNNNNNCTT 2 cut(s) 1431, 1463
FaqI GGGAC 3 cut(s) 378, 789, 1816
FauI CCCGC 1 cut(s) 1749
Fnu4HI GCNGC 3 cut(s) 40, 451, 862
FokI GGATG 1 cut(s) 1865
FriOI GRGCYC 1 cut(s) 1343
Fsp4HI GCNGC 3 cut(s) 40, 451, 862
FspBI CTAG 4 cut(s) 1286, 1572, 1626, 1863
GlaI GCGC 3 cut(s) 38, 449, 860
GluI GCNGC 3 cut(s) 40, 451, 862
GsaI CCCAGC 1 cut(s) 1753
HgaI GACGC 1 cut(s) 1375
HhaI GCGC 3 cut(s) 39, 450, 861
Hin1I GRCGYC 4 cut(s) 14, 425, 836, 1386
Hin6I GCGC 3 cut(s) 37, 448, 859
HinP1I GCGC 3 cut(s) 37, 448, 859
HindIII AAGCTT 3 cut(s) 334, 745, 1174
HphI GGTGA 4 cut(s) 85, 496, 907, 1730
Hpy188I TCNGA 3 cut(s) 939, 1333, 1840
Hpy188III TCNNGA 7 cut(s) 79, 121, 490, 532, 901, 950, 961
HpyAV CCTTC 1 cut(s) 1869
HpyCH4III ACNGT 9 cut(s) 26, 392, 437, 803, 848, 1294, 1615, 1701, 1758
HpyCH4IV ACGT 9 cut(s) 14, 197, 425, 608, 836, 1037, 1496, 1673, 1802
HpyF3I CTNAG 2 cut(s) 1514, 1745
HpySE526I ACGT 9 cut(s) 14, 197, 425, 608, 836, 1037, 1496, 1673, 1802
Hsp92I GRCGYC 4 cut(s) 14, 425, 836, 1386
HspAI GCGC 3 cut(s) 37, 448, 859
KpnI GGTACC 1 cut(s) 1236
Kzo9I GATC 5 cut(s) 117, 528, 957, 1398, 1878
LmnI GCTCC 7 cut(s) 215, 259, 626, 670, 1055, 1099, 1766
Lsp1109I GCAGC 3 cut(s) 51, 462, 873
LweI GCATC 1 cut(s) 1339
MaeI CTAG 4 cut(s) 1286, 1572, 1626, 1863
MaeII ACGT 9 cut(s) 14, 197, 425, 608, 836, 1037, 1496, 1673, 1802
MalI GATC 5 cut(s) 119, 530, 959, 1400, 1880
MbiI CCGCTC 1 cut(s) 1524
MboI GATC 5 cut(s) 117, 528, 957, 1398, 1878
MboII GAAGA 6 cut(s) 127, 152, 538, 563, 967, 992
MflI RGATCY 1 cut(s) 1878
MhlI GDGCHC 2 cut(s) 1343, 1669
MluCI AATT 3 cut(s) 1562, 1631, 1650
MnlI CCTC 6 cut(s) 310, 332, 721, 743, 1150, 1172
Mph1103I ATGCAT 1 cut(s) 1354
MseI TTAA 4 cut(s) 221, 632, 1061, 1452
MslI CAYNNNNRTG 6 cut(s) 125, 536, 965, 1241, 1685, 1726
MvnI CGCG 3 cut(s) 31, 442, 853
NcoI CCATGG 2 cut(s) 411, 822
NdeII GATC 5 cut(s) 117, 528, 957, 1398, 1878
NheI GCTAGC 1 cut(s) 1625
NlaIV GGNNCC 8 cut(s) 409, 820, 936, 1234, 1341, 1551, 1786, 1880
NmuCI GTSAC 7 cut(s) 67, 91, 478, 502, 889, 913, 1265
NsiI ATGCAT 1 cut(s) 1354
NspI RCATGY 3 cut(s) 309, 720, 1149
PagI TCATGA 6 cut(s) 78, 120, 489, 531, 900, 960
PciI ACATGT 3 cut(s) 305, 716, 1145
PkrI GCNGC 3 cut(s) 41, 452, 863
PscI ACATGT 3 cut(s) 305, 716, 1145
Psp1406I AACGTT 3 cut(s) 1496, 1673, 1802
PspEI GGTNACC 1 cut(s) 1403
PspFI CCCAGC 1 cut(s) 1749
PspN4I GGNNCC 8 cut(s) 409, 820, 936, 1234, 1341, 1551, 1786, 1880
PspOMI GGGCCC 1 cut(s) 1339
PstNI CAGNNNCTG 1 cut(s) 1331
PsuI RGATCY 1 cut(s) 1878
RsaI GTAC 4 cut(s) 161, 572, 1001, 1234
RsaNI GTAC 4 cut(s) 160, 571, 1000, 1233
RseI CAYNNNNRTG 6 cut(s) 125, 536, 965, 1241, 1685, 1726
Rsr2I CGGWCCG 3 cut(s) 26, 437, 848
RsrII CGGWCCG 3 cut(s) 26, 437, 848
SaqAI TTAA 4 cut(s) 221, 632, 1061, 1452
SatI GCNGC 3 cut(s) 40, 451, 862
Sau3AI GATC 5 cut(s) 117, 528, 957, 1398, 1878
ScaI AGTACT 3 cut(s) 161, 572, 1001
SduI GDGCHC 2 cut(s) 1343, 1669
SfaNI GCATC 1 cut(s) 1339
SfcI CTRYAG 4 cut(s) 107, 518, 929, 1614
SinI GGWCC 4 cut(s) 26, 437, 848, 1856
SmiMI CAYNNNNRTG 6 cut(s) 125, 536, 965, 1241, 1685, 1726
SmlI CTYRAG 7 cut(s) 226, 323, 637, 734, 1066, 1163, 1519
SmoI CTYRAG 7 cut(s) 226, 323, 637, 734, 1066, 1163, 1519
Sse9I AATT 3 cut(s) 1562, 1631, 1650
SsiI CCGC 8 cut(s) 29, 210, 440, 621, 851, 1050, 1524, 1742
SspI AATATT 2 cut(s) 1308, 1485
SspMI CTAG 4 cut(s) 1286, 1572, 1626, 1863
StyI CCWWGG 3 cut(s) 411, 822, 1408
TaaI ACNGT 9 cut(s) 26, 392, 437, 803, 848, 1294, 1615, 1701, 1758
TaiI ACGT 9 cut(s) 17, 200, 428, 611, 839, 1040, 1499, 1676, 1805
TaqI TCGA 7 cut(s) 21, 187, 432, 598, 843, 1027, 1610
TasI AATT 3 cut(s) 1562, 1631, 1650
TatI WGTACW 3 cut(s) 159, 570, 999
Tru1I TTAA 4 cut(s) 221, 632, 1061, 1452
Tru9I TTAA 4 cut(s) 221, 632, 1061, 1452
TscAI CASTG 4 cut(s) 395, 806, 1608, 1763
TseFI GTSAC 7 cut(s) 67, 91, 478, 502, 889, 913, 1265
TseI GCWGC 3 cut(s) 39, 450, 861
Tsp45I GTSAC 7 cut(s) 67, 91, 478, 502, 889, 913, 1265
TspDTI ATGAA 4 cut(s) 398, 809, 1627, 1724
TspGWI ACGGA 4 cut(s) 246, 657, 1086, 1818
TspRI CASTG 4 cut(s) 395, 806, 1608, 1763
VpaK11BI GGWCC 4 cut(s) 26, 437, 848, 1856
XceI RCATGY 3 cut(s) 309, 720, 1149
XcmI CCANNNNNNNNNTGG 1 cut(s) 1699
XspI CTAG 4 cut(s) 1286, 1572, 1626, 1863
ZraI GACGTC 3 cut(s) 15, 426, 837
ZrmI AGTACT 3 cut(s) 161, 572, 1001
Zsp2I ATGCAT 1 cut(s) 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.