pycom11g15030

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0013644
Physical Location & Seq
Reverse (-)
15436257 .. 15439675
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3042 bp
ATGGCTCTTACATCCACCAGCAATGAATCGGCTGACGCTGACGCCAACGCCAAGGCTCTTGACAGATTGAACCACCTGAAGGAGCAAATAGGCACTGAAACTACAAATTTTCAAGTACTTATCCCTGATTCGACTTCCCAACACTTTATCTTAGGTCCTGCTCTGAAATCCACAAAAAGGTTACCTGATTGTTATAATAGTGAGTTTCCTAAGCGGAAAACTGAAGAGTTTCTTATAAACAATCAAAATGCCAAATTCTACGAAAGGTTTTATGAACACCGTGGTTTGTGGCCTACTAACGACCCTAATTGGGTCCCTTGGTTTGAAAGAGTCGAAGATCAAAAAGGGTACATTTGGCATAAAGCGGGAATATATGATATTCTCCAATTCTCTAAGTTTGCCATCCCTTTCAATCGTTCCTTAGTACTTGCTGCACTCTGCTTTTGGTCAACTTCCACAAACTCTTTTCATCTTCGTCATGGTCCCCTTACTATTACTCTGTTAGATCTTAGTGCTTTGCTAGGACTTAGACCAGATGGTCCCCAGTTTGATGCTCTCGTTGCTAATTCCATCTCCATTCCGGATGATAACTTTGGCATTCGAATTACAAAGAACTCCTCTTTTTCTTCCTTTATTAAAGAACATAACAAAATTGAGGGCCTTGTGACAGATGAAGAGCATATAGCATTTCTTCACTACTGGCTTTGTCGTTACCTACTTTGTTCTCGTTCGTTCAAGATTGTTACATCCAATTTACCCTTGGCTGTGGCTTTATCTAGGGGTGAGCCGTACGCTTTAGGACCCCTTGTTCTTGGTTACTTGTATAGAGGGATAAAGGACTTGCTTGATTCAGAGTTGGGTGCTTCTGGTGGTCCGATTTGGATTCTTCAACTTTGGCTTCACACATACTTTCCTAAAGTACGTCCCAGTTGCATTTCAGTTCCCAACCTCACTTGTGAAGGACTGAAATATGTATTTTTCGAAGGACCTGAGTTTTCCTTTCACGATTGTTTATTGTACCTGTGCCACTTAGACACAGAAGAGAACTTTAACTTCATGCCATATTCAAAGTCAGATGCTTTACCTCGATGGTTGATCTTTCCTCAGTCTGAAATGACCAAAACTGGAATTTCTACAATCCTGGACATGTGGGCAAGCTTTCTGGTTAGCCGTGATCTTCCTGGTTGTATCACTTGTGGAAAATCTGGAAAAAAAATTTGTGGTGTGGAAGCATATTGCCCAAATCTCTGTGCCCGTCAGTTCGGCTTGATTCAGGACATTCCTGCTCCCCCTTTCTTTTCTTTCAATACCGACTTTTCTGAGAGGACAGTGTTTCAAAGTTCTGAACAATTCCAGGAGCTTGAGGCTACCACATCTCACTTGTTCAAGAAACTTAAATTTGTTCCATTTTCACTTCTACCTAGAGCCACCTCATCGTTCAAAGGCTGGTGGGCAAAATACTATGAGGAAGTGTTTCCTCGTGATCAAGATTTAATCCATCTTTTCAAGCTTCATGACTTGGACCAGAACAGACCACTTCCTCCCCTTAAGTCAAATGATGCTTTGAAGAAGCGTAAAGAGTCAACCCTTATACAAACTGAACGCCCCAGTTCTGATCGACTGCAAGTACACCCACCAGAAAAAAGAATCAAATGTGTGGCTCCGCAAGTTGAGGATGGAAAAGAAGCAAATCCTCTGCCTATTTTTCAATGCTTGAGTGGACGAGGGAGAGCTCATTGTAAGAAAAGAACGACCAAAAAAGCATTTCAGTTTTTGAGAAGTATAATAAAGGGGAATTATCTATCTCATGCCAACCCAACTGAGGCAAAGGTTTTGGCAAGCCAAGGAACCACTCATCAATCCAAAAATGAATCCGAGATTAGACGAGGCAAAAGTTTTCAAAAGACAAGGATAACCAAAGAAGAAGTGCACCGGCTTTTGATTAATCTAACAAAGTCCGATTCTGAATTCTATTCTCAGGCTAAGCAAGCCATCTATGAGAAAAGCATGAGTACTCCTCTGTCAAAAAGACAACAATCTGATATAGATATGCAACACATTGCTGAAGTAACTGAATATAACAGTACTCCTAAGCTGGAAGATGTGCCACCTACTGAGGTTGCGGATGCTTCAAATGCAAAGCTTCCTAGTCAAATTTCATCTCCTCCCAGTGAAGAATCAGCTGAATCTCGGCCTCCTCAAGTAACTCAATCCCTGCTTCAAGTAGTGTCACCTCATCCAAATACTATAAGTAAAGAAAGTGGTTCCTACCGCTCCCGTTTTCATGACAATCTTGATGTCAAGATGTCAAAGCCCCTGCATTCTGCCCGAGCTTTGGACTTTCTGGATACTTATCTCCATCATCATCCAGATGCTTGTCTCTTGGCTATAACTGAAGATGCTCCCATTCCTGATTCCTATGAGATTTCTCAAGCCAAGGCCAAGATCCAAAGTATCACCACACTCTCTCTGGATGAAGTCATGGAAATTGAATGTTTACGGAACTTGAAGTCATCATTGGAAATCTTGCTAAACGCCTATGGCCAAACTGGAGTTGAGTATGCGAACATTGAAAATGTCCAGGTGAAGCTTGCTTCTGTGAAGTCCAAGTACCACAAGGCCAATGGAACCGTAGCTGAAGTTAGAAAAAAATTTAATCAGAAGGTAGCACTGGAACAAGAAGTAGAAGTCTACAATCGCCTTTTTTCAAAAGCTCAAGCGGATGAAGAAAAGTTGCAAGCTTGCATCATTGTGCAAAAATCAAGGGTTGAAGAGCTTGAGAAAAAATTGTTTGAAGAAAAAGCTAATTTGGAGAAATTGGAGGAGTTAAATTCCAACCACAAAACCGAAATGGATGAGTTCCGTTGCAAGCTTGAGCACAGCCAGAAGCTGCTTCTGGATCATTGTATGCATGATAAAACTTGGGTGAAGAAAGCTATGCAGGCCAAAAACGATTTTAAATCGATGGAAGCAACTTGGGTTCAGATCCAACAATTGCTTTCCTTAATTAGTGTTCAGAAAACGGGGGAAGCAAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

1014

Amino Acids

115.42

Weight (kDa)

7.36

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 123 - 484 7.5e-47 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013644)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g26742 FvH4_3g26742
malus_domestica MD11G1175200.v1.1
pyrus_communis pycom11g15030
rosa_chinensis RchiOBHm_Chr5g0049171
rosa_laevigata RLG00000034596
rosa_multiflora Rmu_sc0001677.1_g000029
rosa_roxburghii Rroxscaffold_1G00032560
rosa_rugosa Rorug05G0244500 Rorug05G0244600 Rorug05G0244700 Rorug05G0244800 Rorug05G0244900
rosa_samantha Rh5AG323200 Rh5BG333700 Rh5CG358800 Rh5DG345200
rosa_wichuraiana Rw5G030510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 195, 236
AasI GACNNNNNNGTC 1 cut(s) 537
AccBSI CCGCTC 1 cut(s) 2274
AccI GTMKAC 1 cut(s) 2691
AccIII TCCGGA 1 cut(s) 580
AciI CCGC 6 cut(s) 214, 365, 1664, 2123, 2272, 2720
AclWI GGATC 3 cut(s) 2440, 2907, 2980
AcoI YGGCCR 1 cut(s) 2542
AcsI RAATTY 9 cut(s) 106, 254, 1128, 1215, 1397, 1967, 2154, 2651, 2830
AcuI CTGAAG 5 cut(s) 98, 243, 2085, 2415, 2658
AcyI GRCGYC 1 cut(s) 42
AfiI CCNNNNNNNGG 5 cut(s) 79, 177, 310, 1822, 2335
AflII CTTAAG 1 cut(s) 1547
AflIII ACRYGT 1 cut(s) 1146
AjnI CCWGG 4 cut(s) 1140, 1180, 1353, 2580
AjuI GAANNNNNNNTTGG 2 cut(s) 2501, 2533
AloI GAACNNNNNNTCC 2 cut(s) 792, 824
Alw21I GWGCWC 3 cut(s) 1735, 1932, 2880
Alw26I GTCTC 1 cut(s) 2384
Alw44I GTGCAC 1 cut(s) 1928
AlwI GGATC 3 cut(s) 2440, 2907, 2980
AlwNI CAGNNNCTG 1 cut(s) 2890
Ama87I CYCGRG 1 cut(s) 2328
Aor13HI TCCGGA 1 cut(s) 580
AoxI GGCC 7 cut(s) 290, 658, 2192, 2439, 2542, 2619, 2943
ApaLI GTGCAC 1 cut(s) 1928
ApeKI GCWGC 2 cut(s) 431, 2890
ApoI RAATTY 9 cut(s) 106, 254, 1128, 1215, 1397, 1967, 2154, 2651, 2830
AseI ATTAAT 1 cut(s) 1944
Asp700I GAANNNNTTC 2 cut(s) 228, 1473
AspS9I GGNCC 9 cut(s) 155, 313, 482, 539, 658, 800, 872, 986, 1522
AsuHPI GGTGA 5 cut(s) 794, 2223, 2449, 2596, 2938
AsuII TTCGAA 2 cut(s) 601, 981
AvaI CYCGRG 1 cut(s) 2328
AvaII GGWCC 8 cut(s) 155, 313, 482, 539, 800, 872, 986, 1522
BaeGI GKGCMC 2 cut(s) 1255, 1932
BalI TGGCCA 1 cut(s) 2544
BanII GRGCYC 1 cut(s) 1735
BarI GAAGNNNNNNTAC 2 cut(s) 2594, 2626
BauI CACGAG 1 cut(s) 1479
Bbv12I GWGCWC 3 cut(s) 1735, 1932, 2880
BbvI GCAGC 2 cut(s) 418, 2877
BccI CCATC 9 cut(s) 410, 530, 578, 1083, 1506, 1670, 2000, 2367, 2959
BceAI ACGGC 2 cut(s) 772, 1155
BciT130I CCWGG 4 cut(s) 1142, 1182, 1355, 2582
BciVI GTATCC 1 cut(s) 2341
BclI TGATCA 1 cut(s) 1483
BcoDI GTCTC 1 cut(s) 2384
BfaI CTAG 4 cut(s) 521, 777, 1422, 2148
BfrI CTTAAG 1 cut(s) 1547
BfuI GTATCC 1 cut(s) 2341
BglII AGATCT 1 cut(s) 505
BisI GCNGC 2 cut(s) 432, 2891
BlpI GCTNAGC 1 cut(s) 1983
BlsI GCNGC 2 cut(s) 433, 2892
BmcAI AGTACT 4 cut(s) 117, 426, 2014, 2086
Bme1390I CCNGG 4 cut(s) 1142, 1182, 1355, 2582
Bme18I GGWCC 8 cut(s) 155, 313, 482, 539, 800, 872, 986, 1522
BmeT110I CYCGRG 1 cut(s) 2328
BmgT120I GGNCC 9 cut(s) 155, 313, 482, 539, 658, 800, 872, 986, 1522
BmiI GGNNCC 9 cut(s) 314, 315, 484, 541, 802, 1662, 1849, 2266, 2629
BmrFI CCNGG 4 cut(s) 1142, 1182, 1355, 2582
BmrI ACTGGG 4 cut(s) 538, 921, 1602, 2163
BmsI GCATC 7 cut(s) 541, 1066, 1549, 2116, 2362, 2389, 2754
BmuI ACTGGG 4 cut(s) 538, 921, 1602, 2163
BplI GAGNNNNNCTC 2 cut(s) 2002, 2034
BpmI CTGGAG 1 cut(s) 2571
Bpu10I CCTNAGC 2 cut(s) 210, 2091
Bpu1102I GCTNAGC 1 cut(s) 1983
Bpu14I TTCGAA 2 cut(s) 601, 981
BpuEI CTTGAG 7 cut(s) 1382, 1735, 2184, 2415, 2700, 2798, 2894
Bsa29I ATCGAT 1 cut(s) 2963
BsaBI GATNNNNATC 1 cut(s) 2352
BsaHI GRCGYC 1 cut(s) 42
BsaJI CCNNGG 6 cut(s) 51, 280, 317, 759, 1843, 2436
BsaWI WCCGGW 1 cut(s) 580
Bsc4I CCNNNNNNNGG 5 cut(s) 79, 177, 310, 1822, 2335
Bse118I RCCGGY 1 cut(s) 1932
Bse1I ACTGG 8 cut(s) 544, 704, 927, 1129, 1608, 2169, 2554, 2676
Bse3DI GCAATG 2 cut(s) 28, 2058
Bse8I GATNNNNATC 1 cut(s) 2352
BseAI TCCGGA 1 cut(s) 580
BseBI CCWGG 4 cut(s) 1142, 1182, 1355, 2582
BseCI ATCGAT 1 cut(s) 2963
BseDI CCNNGG 6 cut(s) 51, 280, 317, 759, 1843, 2436
BseJI GATNNNNATC 1 cut(s) 2352
BseLI CCNNNNNNNGG 5 cut(s) 79, 177, 310, 1822, 2335
BseMI GCAATG 2 cut(s) 28, 2058
BseMII CTCAG 6 cut(s) 981, 1118, 1311, 1812, 1991, 2106
BseNI ACTGG 8 cut(s) 544, 704, 927, 1129, 1608, 2169, 2554, 2676
BseRI GAGGAG 5 cut(s) 607, 2007, 2154, 2187, 2837
BseSI GKGCMC 2 cut(s) 1255, 1932
BseXI GCAGC 2 cut(s) 418, 2877
BsgI GTGCAG 1 cut(s) 417
BshFI GGCC 7 cut(s) 292, 660, 2194, 2441, 2544, 2621, 2945
BshVI ATCGAT 1 cut(s) 2963
BsiHKAI GWGCWC 3 cut(s) 1735, 1932, 2880
BsiHKCI CYCGRG 1 cut(s) 2328
BsiSI CCGG 2 cut(s) 581, 1933
BsiWI CGTACG 1 cut(s) 789
BslFI GGGAC 4 cut(s) 299, 468, 525, 909
BslI CCNNNNNNNGG 5 cut(s) 79, 177, 310, 1822, 2335
BsmAI GTCTC 1 cut(s) 2384
BsmFI GGGAC 4 cut(s) 299, 468, 525, 909
BsmI GAATGC 2 cut(s) 597, 2320
BsnI GGCC 7 cut(s) 292, 660, 2194, 2441, 2544, 2621, 2945
BsoBI CYCGRG 1 cut(s) 2328
Bsp119I TTCGAA 2 cut(s) 601, 981
Bsp1286I GDGCHC 4 cut(s) 1255, 1735, 1932, 2880
Bsp13I TCCGGA 1 cut(s) 580
Bsp143I GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
Bsp1720I GCTNAGC 1 cut(s) 1983
BspACI CCGC 6 cut(s) 214, 365, 1664, 2123, 2272, 2720
BspANI GGCC 7 cut(s) 292, 660, 2194, 2441, 2544, 2621, 2945
BspCNI CTCAG 6 cut(s) 982, 1117, 1312, 1813, 1990, 2107
BspDI ATCGAT 1 cut(s) 2963
BspEI TCCGGA 1 cut(s) 580
BspHI TCATGA 2 cut(s) 1513, 2284
BspLI GGNNCC 9 cut(s) 314, 315, 484, 541, 802, 1662, 1849, 2266, 2629
BspPI GGATC 3 cut(s) 2440, 2907, 2980
BspQI GCTCTTC 2 cut(s) 669, 2766
BspT104I TTCGAA 2 cut(s) 601, 981
BspTI CTTAAG 1 cut(s) 1547
BsrBI CCGCTC 1 cut(s) 2274
BsrDI GCAATG 2 cut(s) 28, 2058
BsrFI RCCGGY 1 cut(s) 1932
BsrI ACTGG 8 cut(s) 544, 704, 927, 1129, 1608, 2169, 2554, 2676
BssAI RCCGGY 1 cut(s) 1932
BssECI CCNNGG 6 cut(s) 51, 280, 317, 759, 1843, 2436
BssMI GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
BssNI GRCGYC 1 cut(s) 42
BssSI CACGAG 1 cut(s) 1479
BssT1I CCWWGG 5 cut(s) 51, 317, 759, 1843, 2436
Bst2BI CACGAG 1 cut(s) 1479
Bst2UI CCWGG 4 cut(s) 1142, 1182, 1355, 2582
Bst4CI ACNGT 4 cut(s) 281, 1330, 2084, 2632
Bst6I CTCTTC 4 cut(s) 219, 669, 1035, 2766
BstACI GRCGYC 1 cut(s) 42
BstAFI CTTAAG 1 cut(s) 1547
BstBI TTCGAA 2 cut(s) 601, 981
BstC8I GCNNGC 8 cut(s) 1156, 1840, 1989, 2592, 2739, 2743, 2870, 2943
BstDSI CCRYGG 1 cut(s) 280
BstEII GGTNACC 1 cut(s) 180
BstKTI GATC 9 cut(s) 340, 508, 1098, 1177, 1486, 1618, 2448, 2902, 2988
BstMAI GTCTC 1 cut(s) 2384
BstMBI GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
BstMWI GCNNNNNNNGC 4 cut(s) 560, 1988, 2135, 2942
BstNI CCWGG 4 cut(s) 1142, 1182, 1355, 2582
BstNSI RCATGY 1 cut(s) 1150
BstPI GGTNACC 1 cut(s) 180
BstSCI CCNGG 4 cut(s) 1140, 1180, 1353, 2580
BstSLI GKGCMC 2 cut(s) 1255, 1932
BstV1I GCAGC 2 cut(s) 418, 2877
BstX2I RGATCY 3 cut(s) 505, 2445, 2985
BstYI RGATCY 3 cut(s) 505, 2445, 2985
Bsu15I ATCGAT 1 cut(s) 2963
BsuI GTATCC 1 cut(s) 2341
BsuRI GGCC 7 cut(s) 292, 660, 2194, 2441, 2544, 2621, 2945
BsuTUI ATCGAT 1 cut(s) 2963
BtgI CCRYGG 1 cut(s) 280
BtsIMutI CAGTG 4 cut(s) 93, 1335, 2176, 2669
Cac8I GCNNGC 8 cut(s) 1156, 1840, 1989, 2592, 2739, 2743, 2870, 2943
CaiI CAGNNNCTG 1 cut(s) 2890
CciI TCATGA 2 cut(s) 1513, 2284
Cfr10I RCCGGY 1 cut(s) 1932
Cfr13I GGNCC 9 cut(s) 155, 313, 482, 539, 658, 800, 872, 986, 1522
ClaI ATCGAT 1 cut(s) 2963
CseI GACGC 2 cut(s) 44, 50
CviAII CATG 9 cut(s) 479, 1057, 1147, 1514, 1808, 2008, 2285, 2482, 2912
DpnI GATC 9 cut(s) 339, 507, 1097, 1176, 1485, 1617, 2447, 2901, 2987
DpnII GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
DraI TTTAAA 1 cut(s) 2959
DrdI GACNNNNNNGTC 1 cut(s) 537
DseDI GACNNNNNNGTC 1 cut(s) 537
EaeI YGGCCR 1 cut(s) 2542
Eam1104I CTCTTC 4 cut(s) 219, 669, 1035, 2766
EarI CTCTTC 4 cut(s) 219, 669, 1035, 2766
Ecl136II GAGCTC 1 cut(s) 1733
Eco130I CCWWGG 5 cut(s) 51, 317, 759, 1843, 2436
Eco24I GRGCYC 1 cut(s) 1735
Eco47I GGWCC 8 cut(s) 155, 313, 482, 539, 800, 872, 986, 1522
Eco53kI GAGCTC 1 cut(s) 1733
Eco57I CTGAAG 5 cut(s) 98, 243, 2085, 2415, 2658
Eco88I CYCGRG 1 cut(s) 2328
Eco91I GGTNACC 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 1733
EcoO109I RGGNCCY 5 cut(s) 155, 313, 658, 800, 986
EcoO65I GGTNACC 1 cut(s) 180
EcoRI GAATTC 1 cut(s) 1967
EcoRII CCWGG 4 cut(s) 1140, 1180, 1353, 2580
EcoT14I CCWWGG 5 cut(s) 51, 317, 759, 1843, 2436
EcoT22I ATGCAT 1 cut(s) 2913
EcoT38I GRGCYC 1 cut(s) 1735
ErhI CCWWGG 5 cut(s) 51, 317, 759, 1843, 2436
FaeI CATG 9 cut(s) 482, 1060, 1150, 1517, 1811, 2011, 2288, 2485, 2915
FalI AAGNNNNNCTT 2 cut(s) 216, 248
FaqI GGGAC 4 cut(s) 299, 468, 525, 909
FatI CATG 9 cut(s) 478, 1056, 1146, 1513, 1807, 2007, 2284, 2481, 2911
FauI CCCGC 1 cut(s) 358
FbaI TGATCA 1 cut(s) 1483
FblI GTMKAC 1 cut(s) 2691
Fnu4HI GCNGC 2 cut(s) 432, 2891
FriOI GRGCYC 1 cut(s) 1735
Fsp4HI GCNGC 2 cut(s) 432, 2891
FspBI CTAG 4 cut(s) 521, 777, 1422, 2148
GluI GCNGC 2 cut(s) 432, 2891
GsuI CTGGAG 1 cut(s) 2571
HaeIII GGCC 7 cut(s) 292, 660, 2194, 2441, 2544, 2621, 2945
HapII CCGG 2 cut(s) 581, 1933
HgaI GACGC 2 cut(s) 44, 50
Hin1I GRCGYC 1 cut(s) 42
Hin1II CATG 9 cut(s) 482, 1060, 1150, 1517, 1811, 2011, 2288, 2485, 2915
HincII GTYRAC 2 cut(s) 450, 1584
HindII GTYRAC 2 cut(s) 450, 1584
HindIII AAGCTT 6 cut(s) 1156, 1508, 2141, 2588, 2739, 2870
HpaII CCGG 2 cut(s) 581, 1933
HphI GGTGA 5 cut(s) 794, 2223, 2449, 2596, 2938
Hpy166II GTNNAC 7 cut(s) 450, 1584, 1630, 1721, 1930, 2498, 2692
Hpy8I GTNNAC 7 cut(s) 450, 1584, 1630, 1721, 1930, 2498, 2692
HpyAV CCTTC 4 cut(s) 73, 953, 977, 2656
HpyCH4III ACNGT 4 cut(s) 281, 1330, 2084, 2632
HpyCH4IV ACGT 1 cut(s) 922
HpyF10VI GCNNNNNNNGC 4 cut(s) 560, 1988, 2135, 2942
HpySE526I ACGT 1 cut(s) 922
Hsp92I GRCGYC 1 cut(s) 42
Hsp92II CATG 9 cut(s) 482, 1060, 1150, 1517, 1811, 2011, 2288, 2485, 2915
KflI GGGWCCC 1 cut(s) 313
Kpn2I TCCGGA 1 cut(s) 580
Ksp22I TGATCA 1 cut(s) 1483
Kzo9I GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
LguI GCTCTTC 2 cut(s) 669, 2766
LmnI GCTCC 6 cut(s) 82, 1291, 1357, 1666, 2279, 2407
Lsp1109I GCAGC 2 cut(s) 418, 2877
LweI GCATC 7 cut(s) 541, 1066, 1549, 2116, 2362, 2389, 2754
MaeI CTAG 4 cut(s) 521, 777, 1422, 2148
MaeII ACGT 1 cut(s) 922
MaeIII GTNAC 8 cut(s) 180, 664, 710, 742, 815, 2068, 2203, 2229
MalI GATC 9 cut(s) 339, 507, 1097, 1176, 1485, 1617, 2447, 2901, 2987
MbiI CCGCTC 1 cut(s) 2274
MboI GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
MfeI CAATTG 1 cut(s) 2993
MflI RGATCY 3 cut(s) 505, 2445, 2985
MhlI GDGCHC 4 cut(s) 1255, 1735, 1932, 2880
MlsI TGGCCA 1 cut(s) 2544
MluNI TGGCCA 1 cut(s) 2544
MlyI GAGTC 2 cut(s) 339, 1589
MmeI TCCRAC 2 cut(s) 2859, 3013
Mox20I TGGCCA 1 cut(s) 2544
Mph1103I ATGCAT 1 cut(s) 2913
MroI TCCGGA 1 cut(s) 580
MroXI GAANNNNTTC 2 cut(s) 228, 1473
MscI TGGCCA 1 cut(s) 2544
MslI CAYNNNNRTG 2 cut(s) 2370, 2750
Msp20I TGGCCA 1 cut(s) 2544
MspA1I CMGCKG 1 cut(s) 2183
MspCI CTTAAG 1 cut(s) 1547
MspI CCGG 2 cut(s) 581, 1933
MspR9I CCNGG 4 cut(s) 1142, 1182, 1355, 2582
MunI CAATTG 1 cut(s) 2993
Mva1269I GAATGC 2 cut(s) 597, 2320
MvaI CCWGG 4 cut(s) 1142, 1182, 1355, 2582
MwoI GCNNNNNNNGC 4 cut(s) 560, 1988, 2135, 2942
NdeII GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
NlaIII CATG 9 cut(s) 482, 1060, 1150, 1517, 1811, 2011, 2288, 2485, 2915
NlaIV GGNNCC 9 cut(s) 314, 315, 484, 541, 802, 1662, 1849, 2266, 2629
NmeAIII GCCGAG 1 cut(s) 2170
NmuCI GTSAC 2 cut(s) 664, 2229
NsiI ATGCAT 1 cut(s) 2913
NspI RCATGY 1 cut(s) 1150
NspV TTCGAA 2 cut(s) 601, 981
PagI TCATGA 2 cut(s) 1513, 2284
PciI ACATGT 1 cut(s) 1146
PciSI GCTCTTC 2 cut(s) 669, 2766
PctI GAATGC 2 cut(s) 597, 2320
PdmI GAANNNNTTC 2 cut(s) 228, 1473
Pfl23II CGTACG 1 cut(s) 789
PfoI TCCNGGA 2 cut(s) 1140, 1353
PkrI GCNGC 2 cut(s) 433, 2892
PleI GAGTC 2 cut(s) 338, 1588
PpsI GAGTC 2 cut(s) 338, 1588
PpuMI RGGWCCY 4 cut(s) 155, 313, 800, 986
PscI ACATGT 1 cut(s) 1146
PshBI ATTAAT 1 cut(s) 1944
PsiI TTATAA 2 cut(s) 195, 236
Psp124BI GAGCTC 1 cut(s) 1735
Psp5II RGGWCCY 4 cut(s) 155, 313, 800, 986
Psp6I CCWGG 4 cut(s) 1140, 1180, 1353, 2580
PspEI GGTNACC 1 cut(s) 180
PspGI CCWGG 4 cut(s) 1140, 1180, 1353, 2580
PspLI CGTACG 1 cut(s) 789
PspN4I GGNNCC 9 cut(s) 314, 315, 484, 541, 802, 1662, 1849, 2266, 2629
PspPI GGNCC 9 cut(s) 155, 313, 482, 539, 658, 800, 872, 986, 1522
PspPPI RGGWCCY 4 cut(s) 155, 313, 800, 986
PstNI CAGNNNCTG 1 cut(s) 2890
PsuI RGATCY 3 cut(s) 505, 2445, 2985
PvuII CAGCTG 1 cut(s) 2183
RseI CAYNNNNRTG 2 cut(s) 2370, 2750
SacI GAGCTC 1 cut(s) 1735
SapI GCTCTTC 2 cut(s) 669, 2766
SatI GCNGC 2 cut(s) 432, 2891
Sau3AI GATC 9 cut(s) 337, 505, 1095, 1174, 1483, 1615, 2445, 2899, 2985
Sau96I GGNCC 9 cut(s) 155, 313, 482, 539, 658, 800, 872, 986, 1522
ScaI AGTACT 4 cut(s) 117, 426, 2014, 2086
SchI GAGTC 2 cut(s) 339, 1589
ScrFI CCNGG 4 cut(s) 1142, 1182, 1355, 2582
SduI GDGCHC 4 cut(s) 1255, 1735, 1932, 2880
SfaNI GCATC 7 cut(s) 541, 1066, 1549, 2116, 2362, 2389, 2754
SfuI TTCGAA 2 cut(s) 601, 981
SinI GGWCC 8 cut(s) 155, 313, 482, 539, 800, 872, 986, 1522
SmiMI CAYNNNNRTG 2 cut(s) 2370, 2750
SmlI CTYRAG 8 cut(s) 1361, 1547, 1714, 2199, 2430, 2715, 2777, 2873
SmoI CTYRAG 8 cut(s) 1361, 1547, 1714, 2199, 2430, 2715, 2777, 2873
SsiI CCGC 6 cut(s) 214, 365, 1664, 2123, 2272, 2720
SspMI CTAG 4 cut(s) 521, 777, 1422, 2148
SstI GAGCTC 1 cut(s) 1735
StyD4I CCNGG 4 cut(s) 1140, 1180, 1353, 2580
StyI CCWWGG 5 cut(s) 51, 317, 759, 1843, 2436
TaaI ACNGT 4 cut(s) 281, 1330, 2084, 2632
TaiI ACGT 1 cut(s) 925
TaqI TCGA 7 cut(s) 131, 333, 601, 981, 1087, 1618, 2963
TatI WGTACW 5 cut(s) 115, 424, 1627, 2012, 2084
TscAI CASTG 4 cut(s) 100, 1335, 2176, 2676
TseFI GTSAC 2 cut(s) 664, 2229
TseI GCWGC 2 cut(s) 431, 2890
Tsp45I GTSAC 2 cut(s) 664, 2229
TspGWI ACGGA 2 cut(s) 2515, 2852
TspRI CASTG 4 cut(s) 100, 1335, 2176, 2676
Vha464I CTTAAG 1 cut(s) 1547
VneI GTGCAC 1 cut(s) 1928
VpaK11BI GGWCC 8 cut(s) 155, 313, 482, 539, 800, 872, 986, 1522
VspI ATTAAT 1 cut(s) 1944
XapI RAATTY 9 cut(s) 106, 254, 1128, 1215, 1397, 1967, 2154, 2651, 2830
XceI RCATGY 1 cut(s) 1150
XcmI CCANNNNNNNNNTGG 3 cut(s) 757, 2467, 2621
XmiI GTMKAC 1 cut(s) 2691
XmnI GAANNNNTTC 2 cut(s) 228, 1473
XspI CTAG 4 cut(s) 521, 777, 1422, 2148
ZrmI AGTACT 4 cut(s) 117, 426, 2014, 2086
Zsp2I ATGCAT 1 cut(s) 2913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.