Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g26742 FvH4_3g26742 |
| malus_domestica | MD11G1175200.v1.1 |
| pyrus_communis | pycom11g15030 |
| rosa_chinensis | RchiOBHm_Chr5g0049171 |
| rosa_laevigata | RLG00000034596 |
| rosa_multiflora | Rmu_sc0001677.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00032560 |
| rosa_rugosa | Rorug05G0244500 Rorug05G0244600 Rorug05G0244700 Rorug05G0244800 Rorug05G0244900 |
| rosa_samantha | Rh5AG323200 Rh5BG333700 Rh5CG358800 Rh5DG345200 |
| rosa_wichuraiana | Rw5G030510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 24 |
| AccII | CGCG | 1 cut(s) | 76 |
| AciI | CCGC | 3 cut(s) | 46, 76, 81 |
| AcoI | YGGCCR | 2 cut(s) | 60, 99 |
| AfaI | GTAC | 1 cut(s) | 172 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 62, 144 |
| AluBI | AGCT | 2 cut(s) | 161, 185 |
| AluI | AGCT | 2 cut(s) | 161, 185 |
| AoxI | GGCC | 2 cut(s) | 60, 99 |
| AsuC2I | CCSGG | 1 cut(s) | 64 |
| BcnI | CCSGG | 1 cut(s) | 64 |
| BfaI | CTAG | 1 cut(s) | 20 |
| BglII | AGATCT | 1 cut(s) | 194 |
| Bme1390I | CCNGG | 1 cut(s) | 64 |
| BmrFI | CCNGG | 1 cut(s) | 64 |
| BpuMI | CCSGG | 1 cut(s) | 64 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 81, 111 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 62, 144 |
| Bse118I | RCCGGY | 1 cut(s) | 55 |
| Bse1I | ACTGG | 1 cut(s) | 149 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 62, 144 |
| BseNI | ACTGG | 1 cut(s) | 149 |
| BseRI | GAGGAG | 1 cut(s) | 46 |
| Bsh1236I | CGCG | 1 cut(s) | 76 |
| BshFI | GGCC | 2 cut(s) | 62, 101 |
| BsiSI | CCGG | 2 cut(s) | 56, 63 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 62, 144 |
| BsnI | GGCC | 2 cut(s) | 62, 101 |
| Bsp143I | GATC | 1 cut(s) | 194 |
| BspACI | CCGC | 3 cut(s) | 46, 76, 81 |
| BspANI | GGCC | 2 cut(s) | 62, 101 |
| BspFNI | CGCG | 1 cut(s) | 76 |
| BsrFI | RCCGGY | 1 cut(s) | 55 |
| BsrI | ACTGG | 1 cut(s) | 149 |
| BssAI | RCCGGY | 1 cut(s) | 55 |
| BssMI | GATC | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 2 cut(s) | 53, 83 |
| BstDEI | CTNAG | 1 cut(s) | 191 |
| BstFNI | CGCG | 1 cut(s) | 76 |
| BstKTI | GATC | 1 cut(s) | 197 |
| BstMBI | GATC | 1 cut(s) | 194 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 52, 82, 98 |
| BstSCI | CCNGG | 1 cut(s) | 62 |
| BstUI | CGCG | 1 cut(s) | 76 |
| BstX2I | RGATCY | 1 cut(s) | 194 |
| BstYI | RGATCY | 1 cut(s) | 194 |
| BsuRI | GGCC | 2 cut(s) | 62, 101 |
| Cac8I | GCNNGC | 2 cut(s) | 53, 83 |
| Cfr10I | RCCGGY | 1 cut(s) | 55 |
| Csp6I | GTAC | 1 cut(s) | 171 |
| CviAII | CATG | 1 cut(s) | 69 |
| CviJI | RGCY | 5 cut(s) | 55, 62, 101, 161, 185 |
| CviKI_1 | RGCY | 5 cut(s) | 55, 62, 101, 161, 185 |
| CviQI | GTAC | 1 cut(s) | 171 |
| DdeI | CTNAG | 1 cut(s) | 191 |
| DpnI | GATC | 1 cut(s) | 196 |
| DpnII | GATC | 1 cut(s) | 194 |
| EaeI | YGGCCR | 2 cut(s) | 60, 99 |
| EciI | GGCGGA | 1 cut(s) | 61 |
| FaeI | CATG | 1 cut(s) | 72 |
| FaiI | YATR | 2 cut(s) | 70, 167 |
| FatI | CATG | 1 cut(s) | 68 |
| FauI | CCCGC | 1 cut(s) | 74 |
| FblI | GTMKAC | 1 cut(s) | 24 |
| FspBI | CTAG | 1 cut(s) | 20 |
| HaeIII | GGCC | 2 cut(s) | 62, 101 |
| HapII | CCGG | 2 cut(s) | 56, 63 |
| Hin1II | CATG | 1 cut(s) | 72 |
| HpaII | CCGG | 2 cut(s) | 56, 63 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 171 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 171 |
| Hpy99I | CGWCG | 1 cut(s) | 121 |
| HpyAV | CCTTC | 3 cut(s) | 31, 148, 184 |
| HpyCH4IV | ACGT | 1 cut(s) | 132 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 52, 82, 98 |
| HpyF3I | CTNAG | 1 cut(s) | 191 |
| HpySE526I | ACGT | 1 cut(s) | 132 |
| Hsp92II | CATG | 1 cut(s) | 72 |
| Kzo9I | GATC | 1 cut(s) | 194 |
| LmnI | GCTCC | 3 cut(s) | 48, 89, 182 |
| LpnPI | CCDG | 4 cut(s) | 41, 69, 76, 130 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MaeII | ACGT | 1 cut(s) | 132 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 1 cut(s) | 196 |
| MboI | GATC | 1 cut(s) | 194 |
| MflI | RGATCY | 1 cut(s) | 194 |
| MnlI | CCTC | 3 cut(s) | 24, 27, 114 |
| MspI | CCGG | 2 cut(s) | 56, 63 |
| MspR9I | CCNGG | 1 cut(s) | 64 |
| MvnI | CGCG | 1 cut(s) | 76 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 52, 82, 98 |
| NciI | CCSGG | 1 cut(s) | 64 |
| NdeII | GATC | 1 cut(s) | 194 |
| NlaIII | CATG | 1 cut(s) | 72 |
| PsuI | RGATCY | 1 cut(s) | 194 |
| RsaI | GTAC | 1 cut(s) | 172 |
| RsaNI | GTAC | 1 cut(s) | 171 |
| Sau3AI | GATC | 1 cut(s) | 194 |
| ScrFI | CCNGG | 1 cut(s) | 64 |
| SetI | ASST | 6 cut(s) | 42, 125, 135, 163, 176, 187 |
| SsiI | CCGC | 3 cut(s) | 46, 76, 81 |
| SspMI | CTAG | 1 cut(s) | 20 |
| StyD4I | CCNGG | 1 cut(s) | 62 |
| TaiI | ACGT | 1 cut(s) | 135 |
| TaqI | TCGA | 1 cut(s) | 116 |
| XmiI | GTMKAC | 1 cut(s) | 24 |
| XspI | CTAG | 1 cut(s) | 20 |