RLG00000034596

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0013644
Physical Location & Seq
Forward (+)
45743663 .. 45747154
3492 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034596

Sequence Viewer

Length: 2769 bp
ATGGCATCCTCTAGAGATGATGCATTGGCCACCATGGCTGTCAATAGGGTGAATCAACTTATGGAGGAAATAGGCACTGCAACCACCGACTTTCGTGTACTCATCCCTCATTCGAATTCTCAGCACTTTGTCTTAGGTCCAGCACTCAAATCTGACAATAGCTTCCCTGACATTTATAGTGATTTTCCCAAAACGAAAACTGAGGATTTTCTTATACATGATCAAAATGCCAAGTTCTATGAATGTGCTCTGGTAGGACTTAGACCATGTGGTGCCCAATTTGATGCTGTCGTTGCTGATTCCATCTGCATCCCGGAGGATAATTATGGCATTGACGTTAATCAGTTCTCCAGTTTTCCTTCATTTATTAGGGAACATAACAATATTGAAGGAGCTGTGACAGATGAAGAGCATGTAGCATTTCTTCACTATTGGCTTTGCCGTTACCTTCTTTGTTCTCCATCATTCAAGATCATCAAAACCAATTTGCCTTTGGCTGTGGCTTTGTCTAGGGGTGAGTTGTACGCCTTAGGACCCCTGGTTCTTGCCTACTTGTATAGAGGCATCAAGGACTTGTTGCATTCTCAGCTAAATACTACAGGTGGACCAATATGGATTCTTCAACTTTGGCTTCATGCATACTTTCCCAAAATGCGTCCAGATTGTTTTGCAATTCCCAACCTCTCCTGTCATGGACTAAAATATGTTTCTTTCAAACAGCCTAAACTTTTGTTTTATGATTGTTTATTGTATATGAGCTACTTAGACAGAGAAGAGAATTTCAACTTCAATCCATATTCTAAGTTGGATGCTTTACCTCCATGGTTAATATTTCCTTGGACTGAAATGACGGAAACTGAATTTTCTACACTCAAGGACATGTGGGCTAGCTTTCTTGTTAGTCGTGATCTTCCTGTAGGTATAGCTCTTCCAAAATTTGGAAACAAGACGTTTGGTTTTGAAGCATATTGCCCAAATCTTTGTGCACGCCAGTTCGGGCTGATTCAAGCCATTCCTACTCCCCCTTTCTTCTCTCTTAATACCCATTTCCCAGAAAAGATAATTGTTCGCAGTTTTGTAGAACGACTCCAGGTGCTTAAAGTTACTACAGCTCATTTGTTCACAAAACTTGAACTTTCTTCATATTCATCACTACCTAGTACCACCTCATCCTTCAAATCTTGGTGGACCAAATACTATAAGCACACCTTTCCTCAAGATTTGAACTATCTTGAAAAGCTTGATGACTTGACCCGAAACAGAATGCCTCGCCAAGAGCCATCAGAGAGAGGAAGAAAGAATGCTTTGAGGAAGCGCAAAGGGGTAATCACCATTCAAGACCCCAGTTCTAATCAACAGCGAGTACCAGAGAGTGGTACATCAAGAAAAAGGATTAGGTATGTAACTAAGCAAGGAATCTGTTCAAGTGTGACGGACGGAAAAGGAATGCTGCCTATGATTCAATGCCTACGTGGACAGGGCAGAGTTCATAGCAAGACAAGAATGACTATTAAAGCATGCCATATTTTGAGAAGTATAAGAAAGGGAAATTATTTATGTCACACCAAGTTCGAGGAAGCTGCTACTAAGACAAAGAGGTCGACAGTGTGTAAGAACAAACAAGCTAATTGCTCATCCAAAAATCAATTCCAGAGTGGGCAAGGGAAAAGTTCTGGCAACACACCGAAAGGAGAAGTGCATTGTTATTTGATAAATCTGACACATTCCCATTCTCAGTCTCTCTCTGAGGCCACCAAAGCCACCTTCCAAAAGAAAACATGTCCTCAGTCAAAGCATCAAGACTCTGATGCTGTATGTGGACTCGTTGTTGAATCAACTGAAGATAACATTAATTTTCAGGTTAATGATCCTCCACTAACAGAGACTATGGATGCTTCAAATGAGAAGCTACCTGGTCAAATTTCATCTCCGCCAACGGAAGCAGCTGAGCCTCAGACTCCTCAAGAGCCAAGCATTCAATTCCCATTCCATGCACCTTCATCTCATTGCAACCCTTCCTGTTCTCATACCATATGTGGCCGTGAGGTGTCAAAGCCTACAAATTCTATACGAGCGTTGGAGTTTCTGGAACGTTATCTACACATGCATTCAGATATTGGTATCAAAACTGAAGAAACTCCCATTCCTGAATCTGAAGAAATTTCTCAAGCCAAGGTCAAGATCCAAAGTATTTCAACACTTCCTCTGGATAAAGTCATGGAAACTGAATGTTTGCAAAGCTTCAAATTATCACTGGAAACTTTGCTCAGATCTAATGACCAAACTGCAGTGCAGTTGGCAAACATTGAAGATATCCTGAGAAAGCTTGCTTTCTTGGAGTCGAAGTACCCCTCAGCTAGTGTAATCACAGCTGAAGTTAACAAAGCTTTTGTTCAGAAAGTACAGCTGGAACAGGAGGTGGAAGTCTACACTGGCCAAATTTCTGAAGCTAAAAAAGAAGAGGCAAAGTTTTTCGAGTGTGTAAGTATACAGAAGTCAAGAGTTGAGGAACTTGAGACAAAATTGGCTGAAGAGAAAGCTACTTTAATTGCATTGGAGAAGTACCATGCCACCTACAAAAGCAAAATGGATGAATTGAATTACAAGTGTGAGCAATTGCAGCAGATGCTCTGTCATCATAGTATTAATGAGAGAACTTTGGTGAACAAAGCTTTGCAAGCAAGAGGTGATTTTAAATCGATAGAAGCAACTTGGGTTCAGATCCAGCATCTTGTTTCCACAATTGGTGGCAGCAGCAAGCGGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-CCHC_4 zf-RVT

Protein Analysis

923

Amino Acids

104.46

Weight (kDa)

8.22

Isoelectric Point (pI)

50.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 127 - 347 1.8e-28 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013644)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g26742 FvH4_3g26742
malus_domestica MD11G1175200.v1.1
pyrus_communis pycom11g15030
rosa_chinensis RchiOBHm_Chr5g0049171
rosa_laevigata RLG00000034596
rosa_multiflora Rmu_sc0001677.1_g000029
rosa_roxburghii Rroxscaffold_1G00032560
rosa_rugosa Rorug05G0244500 Rorug05G0244600 Rorug05G0244700 Rorug05G0244800 Rorug05G0244900
rosa_samantha Rh5AG323200 Rh5BG333700 Rh5CG358800 Rh5DG345200
rosa_wichuraiana Rw5G030510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1597
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 2 cut(s) 938, 1373
AccI GTMKAC 3 cut(s) 1601, 2427, 2488
AciI CCGC 2 cut(s) 1931, 2761
AclI AACGTT 1 cut(s) 2092
AclWI GGATC 3 cut(s) 1862, 2176, 2716
AcoI YGGCCR 3 cut(s) 27, 2038, 2434
AcsI RAATTY 8 cut(s) 115, 778, 860, 935, 1920, 2062, 2160, 2439
AcuI CTGAAG 6 cut(s) 1860, 2151, 2175, 2394, 2466, 2550
AfaI GTAC 8 cut(s) 99, 524, 1162, 1365, 1378, 2348, 2403, 2564
AfiI CCNNNNNNNGG 2 cut(s) 938, 1373
AflIII ACRYGT 2 cut(s) 879, 1778
AjnI CCWGG 3 cut(s) 537, 1089, 1912
AjuI GAANNNNNNNTTGG 4 cut(s) 1631, 1663, 1748, 1780
AloI GAACNNNNNNTCC 2 cut(s) 525, 557
Alw21I GWGCWC 2 cut(s) 250, 988
Alw26I GTCTC 3 cut(s) 1743, 1877, 2510
Alw44I GTGCAC 1 cut(s) 984
AlwI GGATC 3 cut(s) 1862, 2176, 2716
AoxI GGCC 4 cut(s) 27, 1749, 2038, 2434
ApaLI GTGCAC 1 cut(s) 984
ApeKI GCWGC 6 cut(s) 1450, 1580, 1943, 2620, 2751, 2754
ApoI RAATTY 8 cut(s) 115, 778, 860, 935, 1920, 2062, 2160, 2439
AseI ATTAAT 2 cut(s) 1851, 2646
Asp700I GAANNNNTTC 1 cut(s) 1420
AspLEI GCGC 1 cut(s) 1317
AspS9I GGNCC 4 cut(s) 137, 533, 605, 1188
AsuC2I CCSGG 1 cut(s) 314
AsuHPI GGTGA 5 cut(s) 61, 527, 1321, 2674, 2699
AsuII TTCGAA 1 cut(s) 113
AsuNHI GCTAGC 1 cut(s) 887
AvaII GGWCC 4 cut(s) 137, 533, 605, 1188
AxyI CCTNAGG 1 cut(s) 529
BaeGI GKGCMC 2 cut(s) 277, 988
BalI TGGCCA 2 cut(s) 29, 2436
BanI GGYRCC 1 cut(s) 272
BarI GAAGNNNNNNTAC 2 cut(s) 408, 440
Bbv12I GWGCWC 2 cut(s) 250, 988
BbvCI CCTCAGC 1 cut(s) 2353
BbvI GCAGC 5 cut(s) 1437, 1567, 1955, 2632, 2763
BccI CCATC 3 cut(s) 311, 469, 1288
BceAI ACGGC 2 cut(s) 426, 2025
BcgI CGANNNNNNTGC 2 cut(s) 1562, 1596
BciT130I CCWGG 3 cut(s) 539, 1091, 1914
BclI TGATCA 1 cut(s) 220
BcnI CCSGG 1 cut(s) 314
BcoDI GTCTC 3 cut(s) 1743, 1877, 2510
BfaI CTAG 5 cut(s) 12, 510, 888, 1158, 2358
BfmI CTRYAG 4 cut(s) 597, 915, 1107, 2286
BglI GCCNNNNNGGC 1 cut(s) 35
BglII AGATCT 1 cut(s) 2270
BisI GCNGC 6 cut(s) 1451, 1581, 1944, 2621, 2752, 2755
BlpI GCTNAGC 1 cut(s) 1947
BlsI GCNGC 6 cut(s) 1452, 1582, 1945, 2622, 2753, 2756
Bme1390I CCNGG 4 cut(s) 314, 539, 1091, 1914
Bme18I GGWCC 4 cut(s) 137, 533, 605, 1188
BmgT120I GGNCC 4 cut(s) 137, 533, 605, 1188
BmiI GGNNCC 2 cut(s) 274, 535
BmrFI CCNGG 4 cut(s) 314, 539, 1091, 1914
BmrI ACTGGG 1 cut(s) 1338
BmtI GCTAGC 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 1338
BpmI CTGGAG 2 cut(s) 334, 1073
Bpu10I CCTNAGC 1 cut(s) 2353
Bpu1102I GCTNAGC 1 cut(s) 1947
Bpu14I TTCGAA 1 cut(s) 113
BpuEI CTTGAG 5 cut(s) 857, 1200, 1947, 2151, 2534
BpuMI CCSGG 1 cut(s) 314
Bsa29I ATCGAT 1 cut(s) 2699
BsaAI YACGTR 1 cut(s) 1472
BsaJI CCNNGG 5 cut(s) 33, 537, 821, 836, 2172
BsaXI ACNNNNNCTCC 2 cut(s) 2330, 2360
Bsc4I CCNNNNNNNGG 2 cut(s) 938, 1373
Bse1I ACTGG 5 cut(s) 351, 991, 1344, 2259, 2437
Bse21I CCTNAGG 1 cut(s) 529
Bse3DI GCAATG 1 cut(s) 2005
BseBI CCWGG 3 cut(s) 539, 1091, 1914
BseCI ATCGAT 1 cut(s) 2699
BseDI CCNNGG 5 cut(s) 33, 537, 821, 836, 2172
BseGI GGATG 8 cut(s) 5, 102, 309, 814, 1169, 1634, 1897, 2596
BseLI CCNNNNNNNGG 2 cut(s) 938, 1373
BseMI GCAATG 1 cut(s) 2005
BseNI ACTGG 5 cut(s) 351, 991, 1344, 2259, 2437
BseRI GAGGAG 1 cut(s) 1950
BseSI GKGCMC 2 cut(s) 277, 988
BseXI GCAGC 5 cut(s) 1437, 1567, 1955, 2632, 2763
BsgI GTGCAG 1 cut(s) 2312
BshFI GGCC 4 cut(s) 29, 1751, 2040, 2436
BshNI GGYRCC 1 cut(s) 272
BshVI ATCGAT 1 cut(s) 2699
BsiHKAI GWGCWC 2 cut(s) 250, 988
BsiSI CCGG 1 cut(s) 314
BslI CCNNNNNNNGG 2 cut(s) 938, 1373
BsmAI GTCTC 3 cut(s) 1743, 1877, 2510
BsmI GAATGC 6 cut(s) 580, 1269, 1306, 1452, 1974, 2107
BsnI GGCC 4 cut(s) 29, 1751, 2040, 2436
Bsp119I TTCGAA 1 cut(s) 113
Bsp1286I GDGCHC 3 cut(s) 250, 277, 988
Bsp143I GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
Bsp1720I GCTNAGC 1 cut(s) 1947
Bsp19I CCATGG 2 cut(s) 33, 821
BspACI CCGC 2 cut(s) 1931, 2761
BspANI GGCC 4 cut(s) 29, 1751, 2040, 2436
BspDI ATCGAT 1 cut(s) 2699
BspLI GGNNCC 2 cut(s) 274, 535
BspMAI CTGCAG 1 cut(s) 2290
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 3 cut(s) 1862, 2176, 2716
BspQI GCTCTTC 2 cut(s) 402, 933
BspT104I TTCGAA 1 cut(s) 113
BspT107I GGYRCC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 2005
BsrI ACTGG 5 cut(s) 351, 991, 1344, 2259, 2437
BssECI CCNNGG 5 cut(s) 33, 537, 821, 836, 2172
BssMI GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
BssNAI GTATAC 1 cut(s) 2489
BssT1I CCWWGG 4 cut(s) 33, 821, 836, 2172
Bst1107I GTATAC 1 cut(s) 2489
Bst2UI CCWGG 3 cut(s) 539, 1091, 1914
Bst4CI ACNGT 1 cut(s) 1606
Bst6I CTCTTC 5 cut(s) 402, 768, 933, 2454, 2526
BstAPI GCANNNNNTGC 1 cut(s) 2626
BstBAI YACGTR 1 cut(s) 1472
BstBI TTCGAA 1 cut(s) 113
BstC8I GCNNGC 6 cut(s) 889, 988, 1519, 2328, 2679, 2759
BstDSI CCRYGG 2 cut(s) 33, 821
BstF5I GGATG 8 cut(s) 5, 102, 309, 814, 1169, 1634, 1897, 2596
BstHHI GCGC 1 cut(s) 1317
BstKTI GATC 7 cut(s) 223, 474, 910, 1870, 2184, 2273, 2724
BstMAI GTCTC 3 cut(s) 1743, 1877, 2510
BstMBI GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
BstMWI GCNNNNNNNGC 7 cut(s) 35, 293, 586, 1757, 2620, 2626, 2678
BstNI CCWGG 3 cut(s) 539, 1091, 1914
BstNSI RCATGY 5 cut(s) 416, 883, 1521, 1782, 2107
BstSCI CCNGG 4 cut(s) 312, 537, 1089, 1912
BstSFI CTRYAG 4 cut(s) 597, 915, 1107, 2286
BstSLI GKGCMC 2 cut(s) 277, 988
BstV1I GCAGC 5 cut(s) 1437, 1567, 1955, 2632, 2763
BstX2I RGATCY 3 cut(s) 2181, 2270, 2721
BstYI RGATCY 3 cut(s) 2181, 2270, 2721
BstZ17I GTATAC 1 cut(s) 2489
Bsu15I ATCGAT 1 cut(s) 2699
Bsu36I CCTNAGG 1 cut(s) 529
BsuRI GGCC 4 cut(s) 29, 1751, 2040, 2436
BsuTUI ATCGAT 1 cut(s) 2699
BtgI CCRYGG 2 cut(s) 33, 821
BtsCI GGATG 8 cut(s) 5, 102, 309, 814, 1169, 1634, 1897, 2596
BtsI GCAGTG 2 cut(s) 75, 2295
BtsIMutI CAGTG 5 cut(s) 75, 1611, 2252, 2295, 2430
Cac8I GCNNGC 6 cut(s) 889, 988, 1519, 2328, 2679, 2759
CfoI GCGC 1 cut(s) 1317
Cfr13I GGNCC 4 cut(s) 137, 533, 605, 1188
ClaI ATCGAT 1 cut(s) 2699
CseI GACGC 1 cut(s) 644
CsiI ACCWGGT 1 cut(s) 1912
Csp6I GTAC 8 cut(s) 98, 523, 1161, 1364, 1377, 2347, 2402, 2563
CviQI GTAC 8 cut(s) 98, 523, 1161, 1364, 1377, 2347, 2402, 2563
DpnI GATC 7 cut(s) 222, 473, 909, 1869, 2183, 2272, 2723
DpnII GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
DraI TTTAAA 1 cut(s) 2695
DrdI GACNNNNNNGTC 1 cut(s) 1597
DseDI GACNNNNNNGTC 1 cut(s) 1597
EaeI YGGCCR 3 cut(s) 27, 2038, 2434
Eam1104I CTCTTC 5 cut(s) 402, 768, 933, 2454, 2526
EarI CTCTTC 5 cut(s) 402, 768, 933, 2454, 2526
EciI GGCGGA 1 cut(s) 1920
Eco130I CCWWGG 4 cut(s) 33, 821, 836, 2172
Eco32I GATATC 1 cut(s) 2314
Eco47I GGWCC 4 cut(s) 137, 533, 605, 1188
Eco57I CTGAAG 6 cut(s) 1860, 2151, 2175, 2394, 2466, 2550
Eco81I CCTNAGG 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 533
EcoRI GAATTC 1 cut(s) 115
EcoRII CCWGG 3 cut(s) 537, 1089, 1912
EcoRV GATATC 1 cut(s) 2314
EcoT14I CCWWGG 4 cut(s) 33, 821, 836, 2172
EcoT22I ATGCAT 3 cut(s) 25, 640, 2109
ErhI CCWWGG 4 cut(s) 33, 821, 836, 2172
FalI AAGNNNNNCTT 2 cut(s) 1193, 1225
FauNDI CATATG 1 cut(s) 2033
FbaI TGATCA 1 cut(s) 220
FblI GTMKAC 3 cut(s) 1601, 2427, 2488
Fnu4HI GCNGC 6 cut(s) 1451, 1581, 1944, 2621, 2752, 2755
FokI GGATG 7 cut(s) 89, 296, 821, 1156, 1621, 1904, 2603
Fsp4HI GCNGC 6 cut(s) 1451, 1581, 1944, 2621, 2752, 2755
FspBI CTAG 5 cut(s) 12, 510, 888, 1158, 2358
GlaI GCGC 1 cut(s) 1316
GluI GCNGC 6 cut(s) 1451, 1581, 1944, 2621, 2752, 2755
GsuI CTGGAG 2 cut(s) 334, 1073
HaeIII GGCC 4 cut(s) 29, 1751, 2040, 2436
HapII CCGG 1 cut(s) 314
HgaI GACGC 1 cut(s) 644
HhaI GCGC 1 cut(s) 1317
Hin6I GCGC 1 cut(s) 1315
HinP1I GCGC 1 cut(s) 1315
HincII GTYRAC 2 cut(s) 1602, 2380
HindII GTYRAC 2 cut(s) 1602, 2380
HindIII AAGCTT 5 cut(s) 1238, 2239, 2324, 2385, 2670
HpaI GTTAAC 1 cut(s) 2380
HpaII CCGG 1 cut(s) 314
HphI GGTGA 5 cut(s) 61, 527, 1321, 2674, 2699
HpyAV CCTTC 7 cut(s) 369, 383, 458, 1183, 1774, 2007, 2025
HpyCH4III ACNGT 1 cut(s) 1606
HpyCH4IV ACGT 4 cut(s) 336, 950, 1471, 2092
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 293, 586, 1757, 2620, 2626, 2678
HpySE526I ACGT 4 cut(s) 336, 950, 1471, 2092
HspAI GCGC 1 cut(s) 1315
Ksp22I TGATCA 1 cut(s) 220
KspAI GTTAAC 1 cut(s) 2380
Kzo9I GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
LguI GCTCTTC 2 cut(s) 402, 933
LmnI GCTCC 1 cut(s) 392
Lsp1109I GCAGC 5 cut(s) 1437, 1567, 1955, 2632, 2763
MabI ACCWGGT 1 cut(s) 1912
MaeI CTAG 5 cut(s) 12, 510, 888, 1158, 2358
MaeII ACGT 4 cut(s) 336, 950, 1471, 2092
MaeIII GTNAC 6 cut(s) 397, 443, 1102, 1402, 1429, 1559
MalI GATC 7 cut(s) 222, 473, 909, 1869, 2183, 2272, 2723
MboI GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
MfeI CAATTG 2 cut(s) 2615, 2742
MflI RGATCY 3 cut(s) 2181, 2270, 2721
MhlI GDGCHC 3 cut(s) 250, 277, 988
MlsI TGGCCA 2 cut(s) 29, 2436
MluNI TGGCCA 2 cut(s) 29, 2436
MlyI GAGTC 5 cut(s) 1080, 1796, 1815, 1951, 2348
MmeI TCCRAC 2 cut(s) 786, 2058
Mox20I TGGCCA 2 cut(s) 29, 2436
Mph1103I ATGCAT 3 cut(s) 25, 640, 2109
MroXI GAANNNNTTC 1 cut(s) 1420
MscI TGGCCA 2 cut(s) 29, 2436
Msp20I TGGCCA 2 cut(s) 29, 2436
MspA1I CMGCKG 3 cut(s) 1946, 2372, 2407
MspI CCGG 1 cut(s) 314
MspR9I CCNGG 4 cut(s) 314, 539, 1091, 1914
MunI CAATTG 2 cut(s) 2615, 2742
Mva1269I GAATGC 6 cut(s) 580, 1269, 1306, 1452, 1974, 2107
MvaI CCWGG 3 cut(s) 539, 1091, 1914
MwoI GCNNNNNNNGC 7 cut(s) 35, 293, 586, 1757, 2620, 2626, 2678
NciI CCSGG 1 cut(s) 314
NcoI CCATGG 2 cut(s) 33, 821
NdeI CATATG 1 cut(s) 2033
NdeII GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
NheI GCTAGC 1 cut(s) 887
NlaIV GGNNCC 2 cut(s) 274, 535
NmuCI GTSAC 3 cut(s) 397, 1429, 1559
NsiI ATGCAT 3 cut(s) 25, 640, 2109
NspI RCATGY 5 cut(s) 416, 883, 1521, 1782, 2107
NspV TTCGAA 1 cut(s) 113
PaeI GCATGC 1 cut(s) 1521
PciI ACATGT 2 cut(s) 879, 1778
PciSI GCTCTTC 2 cut(s) 402, 933
PctI GAATGC 6 cut(s) 580, 1269, 1306, 1452, 1974, 2107
PdmI GAANNNNTTC 1 cut(s) 1420
PfeI GAWTC 8 cut(s) 52, 299, 616, 1003, 1416, 1459, 1832, 2150
PflMI CCANNNNNTGG 2 cut(s) 938, 1373
PfoI TCCNGGA 1 cut(s) 312
PkrI GCNGC 6 cut(s) 1452, 1582, 1945, 2622, 2753, 2756
PleI GAGTC 5 cut(s) 1080, 1796, 1815, 1951, 2347
PpsI GAGTC 5 cut(s) 1080, 1796, 1815, 1951, 2347
Ppu21I YACGTR 1 cut(s) 1472
PpuMI RGGWCCY 1 cut(s) 533
PscI ACATGT 2 cut(s) 879, 1778
PshBI ATTAAT 2 cut(s) 1851, 2646
Psp1406I AACGTT 1 cut(s) 2092
Psp5II RGGWCCY 1 cut(s) 533
Psp6I CCWGG 3 cut(s) 537, 1089, 1912
PspGI CCWGG 3 cut(s) 537, 1089, 1912
PspN4I GGNNCC 2 cut(s) 274, 535
PspPI GGNCC 4 cut(s) 137, 533, 605, 1188
PspPPI RGGWCCY 1 cut(s) 533
PsrI GAACNNNNNNTAC 2 cut(s) 2082, 2114
PstI CTGCAG 1 cut(s) 2290
PsuI RGATCY 3 cut(s) 2181, 2270, 2721
PvuII CAGCTG 3 cut(s) 1946, 2372, 2407
RsaI GTAC 8 cut(s) 99, 524, 1162, 1365, 1378, 2348, 2403, 2564
RsaNI GTAC 8 cut(s) 98, 523, 1161, 1364, 1377, 2347, 2402, 2563
SalI GTCGAC 1 cut(s) 1600
SapI GCTCTTC 2 cut(s) 402, 933
SatI GCNGC 6 cut(s) 1451, 1581, 1944, 2621, 2752, 2755
Sau3AI GATC 7 cut(s) 220, 471, 907, 1867, 2181, 2270, 2721
Sau96I GGNCC 4 cut(s) 137, 533, 605, 1188
SchI GAGTC 5 cut(s) 1080, 1796, 1815, 1951, 2348
ScrFI CCNGG 4 cut(s) 314, 539, 1091, 1914
SduI GDGCHC 3 cut(s) 250, 277, 988
SexAI ACCWGGT 1 cut(s) 1912
SfcI CTRYAG 4 cut(s) 597, 915, 1107, 2286
SfuI TTCGAA 1 cut(s) 113
SinI GGWCC 4 cut(s) 137, 533, 605, 1188
SmlI CTYRAG 5 cut(s) 872, 1215, 1962, 2166, 2513
SmoI CTYRAG 5 cut(s) 872, 1215, 1962, 2166, 2513
SphI GCATGC 1 cut(s) 1521
SsiI CCGC 2 cut(s) 1931, 2761
SspI AATATT 2 cut(s) 385, 831
SspMI CTAG 5 cut(s) 12, 510, 888, 1158, 2358
StyD4I CCNGG 4 cut(s) 312, 537, 1089, 1912
StyI CCWWGG 4 cut(s) 33, 821, 836, 2172
TaaI ACNGT 1 cut(s) 1606
TaiI ACGT 4 cut(s) 339, 953, 1474, 2095
TaqI TCGA 6 cut(s) 113, 1572, 1601, 2342, 2475, 2699
TatI WGTACW 2 cut(s) 97, 2401
TfiI GAWTC 8 cut(s) 52, 299, 616, 1003, 1416, 1459, 1832, 2150
TscAI CASTG 5 cut(s) 82, 1611, 2259, 2295, 2437
TseFI GTSAC 3 cut(s) 397, 1429, 1559
TseI GCWGC 6 cut(s) 1450, 1580, 1943, 2620, 2751, 2754
Tsp45I GTSAC 3 cut(s) 397, 1429, 1559
TspGWI ACGGA 4 cut(s) 866, 1448, 1452, 1952
TspRI CASTG 5 cut(s) 82, 1611, 2259, 2295, 2437
Van91I CCANNNNNTGG 2 cut(s) 938, 1373
VneI GTGCAC 1 cut(s) 984
VpaK11BI GGWCC 4 cut(s) 137, 533, 605, 1188
VspI ATTAAT 2 cut(s) 1851, 2646
XapI RAATTY 8 cut(s) 115, 778, 860, 935, 1920, 2062, 2160, 2439
XbaI TCTAGA 1 cut(s) 11
XceI RCATGY 5 cut(s) 416, 883, 1521, 1782, 2107
XcmI CCANNNNNNNNNTGG 1 cut(s) 490
XmiI GTMKAC 3 cut(s) 1601, 2427, 2488
XmnI GAANNNNTTC 1 cut(s) 1420
XspI CTAG 5 cut(s) 12, 510, 888, 1158, 2358
Zsp2I ATGCAT 3 cut(s) 25, 640, 2109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.