pycom11g15580

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0014823
Physical Location & Seq
Forward (+)
16338012 .. 16344619
6608 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1575 bp
ATGGATTTGTCAACCCTCCAAATCCAAATCAAATCACAATCCCAATCAAAGAGACCGCCGCCCAGTGGGTTTGGCACTGGCAGCGCCTCCGTCCGCAGCAATCGCCTTCCCTCCAAATGCCTCATCCCCTCCCTCTCCCTCCTCGCCCTCCCTTTCCTCTTCTACCTCCTCTCCACCGCCCACAAACTCCACCTCTCCCCCAAATTCGCCCACTCCCACTCCACCCTCTTCGGCATCGTCATCTCCGCCCGCCCCTCCTCCATCCGCATCCGCGTCTTCCACTTCCTCGACGGCACCGCCCCCTCCAGCTCCTCCTCCTCCCGCCTACCCCTCTCCGCCTTTGCCTCCCACCCCGACCGCGCCGGCCCCTCCCTCGGCCCCTTGCTCCGCTTCGCCACCCTCCAGGTGCCCAAGAAAGAGCGCCCCAACACCAAGCTCCTCTTCTTTTCGGGCTCTGAGCTTGACTCCCTCGGCTCCGACGTCTCCGAGAAGCTTCTCGAGTCGTGCCGGAAGGCGCTCAGGTCGTCCGGGTTTTGGTTCAAAGACGAGTGGGCCCGAGTCATTCCAGGTGAGGAACAAGGTGTTTATGCCTGGGTGAGTGCCAATTATGCCCTTGGAACTTTGACGAGTGAGCCTCAGGAAACCACTGGGGTTGTTGAACTTGGTGGGACTTCTTTGCAGGTTACGTTTGCTGCAAAACAATCACGACAAGTGAATTCCTCCCCATCTCGAATCATCAAGTTGTTTGGAGTTACTTACCACCTTTACAGTCAAGGCTTGCCGCTATTTGGCCAGGATGCAGCTTGGGAATCACTATATGAGTTGCAGAAGTCCAGAGAGTTGACGCCTTTTTCAAATTCTATGGAGAGAAGTCTTGGTAACCCTTGTATTCCTAGAGGATATAAGCTGACAGTGAATGCTAGTGATGCACAACTTCTAGTTTCCTCAATGGGTGGAAACTTTTCTGCATGCAAATCTGAGGCTTTGGCATCATTAAAGAAAAGACAAGATAAATGCATTGGTGCACCTTGCAAAATTGTCTCATCCTTTCCTTTTGAGTTACGAGGCAAGCCCGTTTCTACCCAGAACTTCTTATTTACTTCTGAGCTTTTTGGGCTGGTGCCAACGGCTTCTTTGTTTGAATTAGAGGCAGCAGGTCAACATTATTGCGAAGATGATTGGGAGAAACAGAAAAATCAGCATCATAGCATTGTTGATTCAGATCTGTTGAAATATTGTTTTTCATCTGCATATATGGTGGCGCTATTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATATGCAAATGAGACCGGAAACATTCTCCTTGATTGGACACTGGGTGCTTTCCTTGTTGAAACAATGCTGGAGCCCCTTGAATGGGAACTTGATAATATCGGCCAGATTGTTGGAAACGAGTCAGTCACTTATTTCTCTTTCTTTGCTTTCCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTACTGCAATCCCGGAAACCACAAATAAAGACTATATACGATTTAGAGAAGGGACGGTATATAATCACCCGTGTACCTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

525

Amino Acids

57.97

Weight (kDa)

8.74

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 72 - 463 4.4e-49 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014823)

Species Orthologous Gene IDs
malus_domestica MD11G1180600.v1.1
prunus_persica Prupe.6G153100_v2.0.a1
pyrus_communis pycom11g15580
rosa_chinensis RchiOBHm_Chr5g0049751
rosa_laevigata RLG00000034644
rosa_multiflora Rmu_sc0016686.1_g000002 Rmu_sc0020783.1_g000001
rosa_roxburghii Rroxscaffold_1G00031680
rosa_rugosa Rorug05G0250800 Rorug05G0250800 Rorug05G0250900
rosa_samantha Rh5AG326900 Rh5BG338000 Rh5CG362600 Rh5DG350200
rosa_wichuraiana Rw0G018430 Rw5G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 483
Acc36I ACCTGC 2 cut(s) 670, 1145
AccB1I GGYRCC 3 cut(s) 293, 406, 1120
AccII CGCG 2 cut(s) 273, 360
AcoI YGGCCR 2 cut(s) 790, 1411
AcsI RAATTY 3 cut(s) 203, 715, 856
AcyI GRCGYC 2 cut(s) 480, 845
AdeI CACNNNGTG 1 cut(s) 1355
AfaI GTAC 2 cut(s) 1494, 1566
AfiI CCNNNNNNNGG 6 cut(s) 65, 374, 534, 788, 1392, 1393
AgsI TTSAA 7 cut(s) 541, 659, 855, 1142, 1231, 1370, 1391
AjnI CCWGG 4 cut(s) 402, 565, 590, 792
AjuI GAANNNNNNNTTGG 2 cut(s) 425, 457
AluBI AGCT 8 cut(s) 309, 436, 460, 493, 803, 907, 1108, 1472
AluI AGCT 8 cut(s) 309, 436, 460, 493, 803, 907, 1108, 1472
Alw21I GWGCWC 1 cut(s) 1027
Alw26I GTCTC 4 cut(s) 46, 487, 1045, 1316
Alw44I GTGCAC 1 cut(s) 1023
Ama87I CYCGRG 2 cut(s) 497, 555
AoxI GGCC 5 cut(s) 364, 376, 552, 790, 1411
ApaI GGGCCC 1 cut(s) 556
ApaLI GTGCAC 1 cut(s) 1023
ApeKI GCWGC 5 cut(s) 81, 96, 692, 800, 1151
ApoI RAATTY 3 cut(s) 203, 715, 856
Asp700I GAANNNNTTC 1 cut(s) 961
AspA2I CCTAGG 1 cut(s) 1568
AspLEI GCGC 5 cut(s) 86, 362, 423, 517, 1264
AspS9I GGNCC 4 cut(s) 365, 377, 552, 553
AsuC2I CCSGG 2 cut(s) 529, 1504
AsuHPI GGTGA 3 cut(s) 581, 607, 1549
AvaI CYCGRG 2 cut(s) 497, 555
AvrII CCTAGG 1 cut(s) 1568
AxyI CCTNAGG 1 cut(s) 636
BaeGI GKGCMC 3 cut(s) 411, 556, 1027
BaeI ACNNNNGTAYC 1 cut(s) 1548
BalI TGGCCA 1 cut(s) 792
BanI GGYRCC 3 cut(s) 293, 406, 1120
BanII GRGCYC 3 cut(s) 455, 556, 1386
BbsI GAAGAC 1 cut(s) 268
Bbv12I GWGCWC 1 cut(s) 1027
BbvI GCAGC 5 cut(s) 93, 108, 679, 812, 1163
BccI CCATC 2 cut(s) 269, 733
BceAI ACGGC 2 cut(s) 307, 1143
BciT130I CCWGG 4 cut(s) 404, 567, 592, 794
BcnI CCSGG 2 cut(s) 529, 1504
BcoDI GTCTC 4 cut(s) 46, 487, 1045, 1316
BfaI CTAG 5 cut(s) 894, 921, 938, 1280, 1569
BfoI RGCGCY 4 cut(s) 87, 424, 518, 1265
BfuAI ACCTGC 2 cut(s) 670, 1145
BglII AGATCT 1 cut(s) 1222
BisI GCNGC 7 cut(s) 59, 82, 97, 693, 782, 801, 1152
BlnI CCTAGG 1 cut(s) 1568
BlsI GCNGC 7 cut(s) 60, 83, 98, 694, 783, 802, 1153
Bme1390I CCNGG 6 cut(s) 404, 529, 567, 592, 794, 1504
BmeT110I CYCGRG 2 cut(s) 497, 555
BmgT120I GGNCC 4 cut(s) 365, 377, 552, 553
BmiI GGNNCC 8 cut(s) 295, 367, 379, 408, 475, 554, 1122, 1383
BmrFI CCNGG 6 cut(s) 404, 529, 567, 592, 794, 1504
BmrI ACTGGG 3 cut(s) 57, 657, 1361
BmsI GCATC 6 cut(s) 243, 276, 787, 916, 998, 1210
BmuI ACTGGG 3 cut(s) 57, 657, 1361
BpiI GAAGAC 1 cut(s) 268
BplI GAGNNNNNCTC 4 cut(s) 449, 481, 619, 651
BpmI CTGGAG 3 cut(s) 289, 386, 1400
Bpu10I CCTNAGC 1 cut(s) 518
BpuMI CCSGG 2 cut(s) 529, 1504
BsaBI GATNNNNATC 1 cut(s) 1221
BsaHI GRCGYC 2 cut(s) 480, 845
BsaI GGTCTC 2 cut(s) 46, 1316
BsaJI CCNNGG 6 cut(s) 373, 469, 591, 613, 1290, 1568
BsaWI WCCGGW 1 cut(s) 1325
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 203, 233
Bsc4I CCNNNNNNNGG 6 cut(s) 65, 374, 534, 788, 1392, 1393
Bse118I RCCGGY 1 cut(s) 362
Bse1I ACTGG 4 cut(s) 63, 82, 652, 1356
Bse21I CCTNAGG 1 cut(s) 636
Bse8I GATNNNNATC 1 cut(s) 1221
BseBI CCWGG 4 cut(s) 404, 567, 592, 794
BseDI CCNNGG 6 cut(s) 373, 469, 591, 613, 1290, 1568
BseGI GGATG 6 cut(s) 123, 261, 267, 802, 1043, 1300
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 6 cut(s) 65, 374, 534, 788, 1392, 1393
BseMII CTCAG 5 cut(s) 447, 532, 650, 969, 1095
BseNI ACTGG 4 cut(s) 63, 82, 652, 1356
BseRI GAGGAG 7 cut(s) 131, 158, 247, 301, 304, 307, 428
BseSI GKGCMC 3 cut(s) 411, 556, 1027
BseXI GCAGC 5 cut(s) 93, 108, 679, 812, 1163
Bsh1236I CGCG 2 cut(s) 273, 360
Bsh1285I CGRYCG 1 cut(s) 358
BshFI GGCC 5 cut(s) 366, 378, 554, 792, 1413
BshNI GGYRCC 3 cut(s) 293, 406, 1120
BsiEI CGRYCG 1 cut(s) 358
BsiHKAI GWGCWC 1 cut(s) 1027
BsiHKCI CYCGRG 2 cut(s) 497, 555
BsiSI CCGG 5 cut(s) 363, 508, 528, 1326, 1504
BslFI GGGAC 2 cut(s) 682, 1557
BslI CCNNNNNNNGG 6 cut(s) 65, 374, 534, 788, 1392, 1393
BsmAI GTCTC 4 cut(s) 46, 487, 1045, 1316
BsmBI CGTCTC 1 cut(s) 487
BsmFI GGGAC 2 cut(s) 682, 1557
BsmI GAATGC 1 cut(s) 922
BsnI GGCC 5 cut(s) 366, 378, 554, 792, 1413
Bso31I GGTCTC 2 cut(s) 46, 1316
BsoBI CYCGRG 2 cut(s) 497, 555
Bsp120I GGGCCC 1 cut(s) 552
Bsp1286I GDGCHC 5 cut(s) 411, 455, 556, 1027, 1386
Bsp143I GATC 1 cut(s) 1222
Bsp19I CCATGG 1 cut(s) 1290
BspANI GGCC 5 cut(s) 366, 378, 554, 792, 1413
BspCNI CTCAG 5 cut(s) 448, 531, 649, 970, 1096
BspFNI CGCG 2 cut(s) 273, 360
BspLI GGNNCC 8 cut(s) 295, 367, 379, 408, 475, 554, 1122, 1383
BspMI ACCTGC 2 cut(s) 670, 1145
BspT107I GGYRCC 3 cut(s) 293, 406, 1120
BspTNI GGTCTC 2 cut(s) 46, 1316
BsrFI RCCGGY 1 cut(s) 362
BsrI ACTGG 4 cut(s) 63, 82, 652, 1356
BssAI RCCGGY 1 cut(s) 362
BssECI CCNNGG 6 cut(s) 373, 469, 591, 613, 1290, 1568
BssMI GATC 1 cut(s) 1222
BssNI GRCGYC 2 cut(s) 480, 845
BssT1I CCWWGG 3 cut(s) 613, 1290, 1568
Bst2UI CCWGG 4 cut(s) 404, 567, 592, 794
Bst4CI ACNGT 4 cut(s) 770, 913, 1277, 1548
Bst6I CTCTTC 3 cut(s) 164, 233, 446
BstACI GRCGYC 2 cut(s) 480, 845
BstC8I GCNNGC 5 cut(s) 250, 364, 779, 970, 1070
BstDEI CTNAG 5 cut(s) 456, 518, 636, 978, 1104
BstDSI CCRYGG 1 cut(s) 1290
BstEII GGTNACC 1 cut(s) 878
BstF5I GGATG 6 cut(s) 123, 261, 267, 802, 1043, 1300
BstFNI CGCG 2 cut(s) 273, 360
BstH2I RGCGCY 4 cut(s) 87, 424, 518, 1265
BstHHI GCGC 5 cut(s) 86, 362, 423, 517, 1264
BstKTI GATC 1 cut(s) 1225
BstMAI GTCTC 4 cut(s) 46, 487, 1045, 1316
BstMBI GATC 1 cut(s) 1222
BstMCI CGRYCG 1 cut(s) 358
BstMWI GCNNNNNNNGC 6 cut(s) 81, 102, 608, 926, 1114, 1478
BstNI CCWGG 4 cut(s) 404, 567, 592, 794
BstNSI RCATGY 1 cut(s) 972
BstPI GGTNACC 1 cut(s) 878
BstSCI CCNGG 6 cut(s) 402, 527, 565, 590, 792, 1502
BstSLI GKGCMC 3 cut(s) 411, 556, 1027
BstUI CGCG 2 cut(s) 273, 360
BstV1I GCAGC 5 cut(s) 93, 108, 679, 812, 1163
BstV2I GAAGAC 1 cut(s) 268
BstX2I RGATCY 1 cut(s) 1222
BstXI CCANNNNNNTGG 1 cut(s) 1421
BstYI RGATCY 1 cut(s) 1222
Bsu36I CCTNAGG 1 cut(s) 636
BsuRI GGCC 5 cut(s) 366, 378, 554, 792, 1413
BtgI CCRYGG 1 cut(s) 1290
BtsCI GGATG 6 cut(s) 123, 261, 267, 802, 1043, 1300
BtsIMutI CAGTG 5 cut(s) 70, 75, 645, 918, 1349
BveI ACCTGC 2 cut(s) 670, 1145
Cac8I GCNNGC 5 cut(s) 250, 364, 779, 970, 1070
CfoI GCGC 5 cut(s) 86, 362, 423, 517, 1264
Cfr10I RCCGGY 1 cut(s) 362
Cfr13I GGNCC 4 cut(s) 365, 377, 552, 553
CseI GACGC 2 cut(s) 262, 853
Csp6I GTAC 2 cut(s) 1493, 1565
CspCI CAANNNNNGTGG 2 cut(s) 634, 669
CviAII CATG 3 cut(s) 969, 1271, 1291
CviQI GTAC 2 cut(s) 1493, 1565
DdeI CTNAG 5 cut(s) 456, 518, 636, 978, 1104
DpnI GATC 1 cut(s) 1224
DpnII GATC 1 cut(s) 1222
DraIII CACNNNGTG 1 cut(s) 1355
EaeI YGGCCR 2 cut(s) 790, 1411
Eam1104I CTCTTC 3 cut(s) 164, 233, 446
EarI CTCTTC 3 cut(s) 164, 233, 446
EciI GGCGGA 2 cut(s) 235, 325
Eco130I CCWWGG 3 cut(s) 613, 1290, 1568
Eco24I GRGCYC 3 cut(s) 455, 556, 1386
Eco31I GGTCTC 2 cut(s) 46, 1316
Eco81I CCTNAGG 1 cut(s) 636
Eco88I CYCGRG 2 cut(s) 497, 555
Eco91I GGTNACC 1 cut(s) 878
EcoO65I GGTNACC 1 cut(s) 878
EcoRI GAATTC 1 cut(s) 715
EcoRII CCWGG 4 cut(s) 402, 565, 590, 792
EcoT14I CCWWGG 3 cut(s) 613, 1290, 1568
EcoT22I ATGCAT 1 cut(s) 1019
EcoT38I GRGCYC 3 cut(s) 455, 556, 1386
ErhI CCWWGG 3 cut(s) 613, 1290, 1568
Esp3I CGTCTC 1 cut(s) 487
FaeI CATG 3 cut(s) 972, 1274, 1294
FalI AAGNNNNNCTT 2 cut(s) 425, 457
FaqI GGGAC 2 cut(s) 682, 1557
FatI CATG 3 cut(s) 968, 1270, 1290
FauI CCCGC 2 cut(s) 257, 329
Fnu4HI GCNGC 7 cut(s) 59, 82, 97, 693, 782, 801, 1152
FokI GGATG 6 cut(s) 110, 248, 254, 809, 1030, 1307
FriOI GRGCYC 3 cut(s) 455, 556, 1386
Fsp4HI GCNGC 7 cut(s) 59, 82, 97, 693, 782, 801, 1152
FspBI CTAG 5 cut(s) 894, 921, 938, 1280, 1569
GlaI GCGC 5 cut(s) 85, 361, 422, 516, 1263
GluI GCNGC 7 cut(s) 59, 82, 97, 693, 782, 801, 1152
GsuI CTGGAG 3 cut(s) 289, 386, 1400
HaeII RGCGCY 4 cut(s) 87, 424, 518, 1265
HaeIII GGCC 5 cut(s) 366, 378, 554, 792, 1413
HapII CCGG 5 cut(s) 363, 508, 528, 1326, 1504
HgaI GACGC 2 cut(s) 262, 853
HhaI GCGC 5 cut(s) 86, 362, 423, 517, 1264
Hin1I GRCGYC 2 cut(s) 480, 845
Hin1II CATG 3 cut(s) 972, 1274, 1294
Hin6I GCGC 5 cut(s) 84, 360, 421, 515, 1262
HinP1I GCGC 5 cut(s) 84, 360, 421, 515, 1262
HincII GTYRAC 3 cut(s) 12, 843, 1160
HindII GTYRAC 3 cut(s) 12, 843, 1160
HindIII AAGCTT 1 cut(s) 491
HinfI GANTC 8 cut(s) 464, 500, 558, 732, 809, 1217, 1284, 1430
HpaII CCGG 5 cut(s) 363, 508, 528, 1326, 1504
HphI GGTGA 3 cut(s) 581, 607, 1549
Hpy166II GTNNAC 5 cut(s) 12, 843, 1025, 1160, 1565
Hpy188I TCNGA 6 cut(s) 457, 478, 487, 979, 1105, 1222
Hpy188III TCNNGA 5 cut(s) 497, 638, 705, 729, 834
Hpy8I GTNNAC 5 cut(s) 12, 843, 1025, 1160, 1565
Hpy99I CGWCG 2 cut(s) 293, 482
HpyAV CCTTC 3 cut(s) 116, 505, 1534
HpyCH4III ACNGT 4 cut(s) 770, 913, 1277, 1548
HpyCH4IV ACGT 2 cut(s) 480, 686
HpyF10VI GCNNNNNNNGC 6 cut(s) 81, 102, 608, 926, 1114, 1478
HpyF3I CTNAG 5 cut(s) 456, 518, 636, 978, 1104
HpySE526I ACGT 2 cut(s) 480, 686
Hsp92I GRCGYC 2 cut(s) 480, 845
Hsp92II CATG 3 cut(s) 972, 1274, 1294
HspAI GCGC 5 cut(s) 84, 360, 421, 515, 1262
KroI GCCGGC 1 cut(s) 362
KroNI GCCGGC 1 cut(s) 364
Kzo9I GATC 1 cut(s) 1222
LmnI GCTCC 5 cut(s) 314, 390, 441, 479, 1381
Lsp1109I GCAGC 5 cut(s) 93, 108, 679, 812, 1163
LweI GCATC 6 cut(s) 243, 276, 787, 916, 998, 1210
MaeI CTAG 5 cut(s) 894, 921, 938, 1280, 1569
MaeII ACGT 2 cut(s) 480, 686
MaeIII GTNAC 5 cut(s) 682, 751, 878, 1059, 1435
MalI GATC 1 cut(s) 1224
MboI GATC 1 cut(s) 1222
MboII GAAGA 5 cut(s) 151, 220, 268, 433, 1184
MflI RGATCY 1 cut(s) 1222
MhlI GDGCHC 5 cut(s) 411, 455, 556, 1027, 1386
MlsI TGGCCA 1 cut(s) 792
MluCI AATT 6 cut(s) 203, 604, 715, 856, 1035, 1142
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 4 cut(s) 458, 509, 567, 1439
MmeI TCCRAC 3 cut(s) 501, 1288, 1402
Mox20I TGGCCA 1 cut(s) 792
Mph1103I ATGCAT 1 cut(s) 1019
MroNI GCCGGC 1 cut(s) 362
MroXI GAANNNNTTC 1 cut(s) 961
MscI TGGCCA 1 cut(s) 792
MseI TTAA 2 cut(s) 995, 1466
Msp20I TGGCCA 1 cut(s) 792
MspI CCGG 5 cut(s) 363, 508, 528, 1326, 1504
MspR9I CCNGG 6 cut(s) 404, 529, 567, 592, 794, 1504
Mva1269I GAATGC 1 cut(s) 922
MvaI CCWGG 4 cut(s) 404, 567, 592, 794
MvnI CGCG 2 cut(s) 273, 360
MwoI GCNNNNNNNGC 6 cut(s) 81, 102, 608, 926, 1114, 1478
NaeI GCCGGC 1 cut(s) 364
NciI CCSGG 2 cut(s) 529, 1504
NcoI CCATGG 1 cut(s) 1290
NdeII GATC 1 cut(s) 1222
NgoMIV GCCGGC 1 cut(s) 362
NlaIII CATG 3 cut(s) 972, 1274, 1294
NlaIV GGNNCC 8 cut(s) 295, 367, 379, 408, 475, 554, 1122, 1383
NmeAIII GCCGAG 2 cut(s) 354, 450
NmuCI GTSAC 1 cut(s) 1435
NsiI ATGCAT 1 cut(s) 1019
NspI RCATGY 1 cut(s) 972
PaeI GCATGC 1 cut(s) 972
PaeR7I CTCGAG 1 cut(s) 497
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PctI GAATGC 1 cut(s) 922
PdiI GCCGGC 1 cut(s) 364
PdmI GAANNNNTTC 1 cut(s) 961
PfeI GAWTC 4 cut(s) 732, 809, 1217, 1284
PfoI TCCNGGA 1 cut(s) 1502
PkrI GCNGC 7 cut(s) 60, 83, 98, 694, 783, 802, 1153
PleI GAGTC 4 cut(s) 458, 508, 566, 1438
PpsI GAGTC 4 cut(s) 458, 508, 566, 1438
Psp6I CCWGG 4 cut(s) 402, 565, 590, 792
PspEI GGTNACC 1 cut(s) 878
PspGI CCWGG 4 cut(s) 402, 565, 590, 792
PspN4I GGNNCC 8 cut(s) 295, 367, 379, 408, 475, 554, 1122, 1383
PspOMI GGGCCC 1 cut(s) 552
PspPI GGNCC 4 cut(s) 365, 377, 552, 553
PsuI RGATCY 1 cut(s) 1222
RsaI GTAC 2 cut(s) 1494, 1566
RsaNI GTAC 2 cut(s) 1493, 1565
SaqAI TTAA 2 cut(s) 995, 1466
SatI GCNGC 7 cut(s) 59, 82, 97, 693, 782, 801, 1152
Sau3AI GATC 1 cut(s) 1222
Sau96I GGNCC 4 cut(s) 365, 377, 552, 553
SchI GAGTC 4 cut(s) 458, 509, 567, 1439
ScrFI CCNGG 6 cut(s) 404, 529, 567, 592, 794, 1504
SduI GDGCHC 5 cut(s) 411, 455, 556, 1027, 1386
SfaNI GCATC 6 cut(s) 243, 276, 787, 916, 998, 1210
Sfr274I CTCGAG 1 cut(s) 497
SlaI CTCGAG 1 cut(s) 497
SmlI CTYRAG 1 cut(s) 497
SmoI CTYRAG 1 cut(s) 497
SphI GCATGC 1 cut(s) 972
Sse9I AATT 6 cut(s) 203, 604, 715, 856, 1035, 1142
SspI AATATT 1 cut(s) 1235
SspMI CTAG 5 cut(s) 894, 921, 938, 1280, 1569
StyD4I CCNGG 6 cut(s) 402, 527, 565, 590, 792, 1502
StyI CCWWGG 3 cut(s) 613, 1290, 1568
TaaI ACNGT 4 cut(s) 770, 913, 1277, 1548
TaiI ACGT 2 cut(s) 483, 689
TaqI TCGA 3 cut(s) 288, 498, 730
TasI AATT 6 cut(s) 203, 604, 715, 856, 1035, 1142
TatI WGTACW 1 cut(s) 1492
TauI GCSGC 2 cut(s) 61, 784
TfiI GAWTC 4 cut(s) 732, 809, 1217, 1284
Tru1I TTAA 2 cut(s) 995, 1466
Tru9I TTAA 2 cut(s) 995, 1466
TscAI CASTG 5 cut(s) 70, 82, 652, 918, 1356
TseFI GTSAC 1 cut(s) 1435
TseI GCWGC 5 cut(s) 81, 96, 692, 800, 1151
Tsp45I GTSAC 1 cut(s) 1435
TspDTI ATGAA 1 cut(s) 1233
TspGWI ACGGA 1 cut(s) 79
TspRI CASTG 5 cut(s) 70, 82, 652, 918, 1356
VneI GTGCAC 1 cut(s) 1023
XapI RAATTY 3 cut(s) 203, 715, 856
XceI RCATGY 1 cut(s) 972
XhoI CTCGAG 1 cut(s) 497
XmaJI CCTAGG 1 cut(s) 1568
XmnI GAANNNNTTC 1 cut(s) 961
XspI CTAG 5 cut(s) 894, 921, 938, 1280, 1569
ZraI GACGTC 1 cut(s) 481
Zsp2I ATGCAT 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.