Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009527

Physical Location & Seq

Genomic Coordinates Reverse (-)

21569187 .. 21572862

Gene Structure 3676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAAGATACCCAGCAAGCCCCGGCACCTCTCGCCAACGTTCCCACCGCCGGACTCAGATCTTCACCTCCACAGACCCCCCACCACCCGCAAGAAGACCCGGGCACCCGGTTCGGCCCGGTTGAAGCGGGCCGGACTTCCGACCGGAAAGCGGAGCCGACCCGAGACGCCTTTGCTCAAGTGGAAGATTGACGAAGGCCCAGAAGAGCGCCAGGGGCACGGGGAGAGGCGAAAGGACCAAAATGCCCGTGAGGAGGAAAGAGAGGACGGAGTGAGGAGAAAGGGCAGGAAGGGAAGAGAGGCCCCCTTGTCGGCCAGGAAGCTTGCCGCTGGTCTGTGGCGGCTGCAGTTACCGGAGACGGGTTCCAGTGTACCTGGACGTAATGGGAAGCTAGGGTTTCAGCCTGACGTTGGCCATATTGGGGTACCATTTCTCCGTAATCGTAACAGCAAAGGATATGCTTCTGAAGCAAATGATCTTTTACAAAGCCCTAGGTCAACCTCAAGGAATGGGTTCTTGTCCAAGTTATCCAACTCTGTCATGGAGGGGCAAACAAAATGGGATCCAGTCTGCTTGAAAACATCAGATGAGGTACGGCAAATTTACAGCCAAATGAAGCTTCTTGACCAACAAGCAAGTGCTGTATCAGTTGTATCTGTACTTGAAGCTGAGCTAGAGCAGGCACGAGCTCGCATTCAGGAGCTTGAGATGGAACGGTGTTCCTCAAAAAAGAAACTTGAGCACTTCTTAAGGAATGTCAGTGAGGAAAGAGTTTCATGGAGGAGCCGAGAGCATGAGAAAGTCCGCGCATTTATTGATGACATGAAGTCTGAATTGAACCGGGAAAGGAAGAGTCGCCAGAGAACTGAGATAATCAATTCCAAATTGGTTAATGAGCTTGCTGATGTCAAGTTATCAGCAAAGCGATACATGCAGGAGTACGAGAAAGAAAGAAAGGCCAGAGAATTGATTGAAGAAGTATGTGATGAGCTTGCTAAGGAAATTGGAGAAGACAAGGCTGAAGTTGAAGCATTGAAGAGAGAATCCATGAAACTCAGAGAGGAAGTGGACGAGGAAAGGAAGATGTTGCAGATGGCAGAAGTCTGGCGTGAGGAACGTGTCCAAATGAAGCTGGTTGATGCAAAGGTGGCAGTTGAGGAGAAGTATTCTCTGATGAACAAGATTGTGTCAGATCTGGAGAATTTTCTGACGTCAAGAAGTGCAACACCAGATGTGAAGGAAATGAGAGAAGTAGAATATCTGCGACAGGCTGCTGCTGCTGTAAATATTCAAGACGTCAAGGACTTTTTTTATGAACCCCCCAATCCTGATGATATCTTTTCTGTGTTCGAAGAAGTTAATTTCGGTGAGCCTAATGAGAGGGAGATTGAGCAGTGTGTTGCTTACATTCCTGCTAGCCATGGTTCAAAAATTCGTACTGTGAGTCCTGAAGGCAATGGAATCAATAAGGACTGGATCCAGAGACATCCAGTTGCATTTGTTGGTCATAATGGTGATATAGAAGAAGATGAGAGTGGTTGGGAAACTGTGAGCCATCTCGAGGATCAGGGCTCAAGCTATTCGCCAGACGGGAGTGCCCCATCTGTCAATAAGAATCGCCGAGAGAGTAATGTCTCAGAGAGTGGAACAGAATGGGAAGAAGAAGTTGAGGGAACACCAATTACTGAAATCAGCGAGGTTTGCTCGGTACCAACAAAGCAGACGAAGAAGGTATCATCAATAGCAAGGCTTTGGAGGTCTGGCCAAAACAATGGGGAAAACTACAAGATAATCTCGCTAGAGGGAATAAACAGTAGGCTATCGAATGGAAGGATATCCACTAGGGGTCTGGTATCCCCCGATCGGGGTTCGGGTAAAGGCGGGCTTAGTCCCTCTGATTTAGTGGGGCAGTGGAATTCTCCTGAGACGGGGCATCACATTCGGGGTATGAAAGGGTGCATTCCGCTTGGCGCCCAGAAGCATAGTTTGAAGGCAAAGCTTTTGGAGGCAAGGTTGGACAGTCATAAGGTCCAACTGCGTCATGTGCTTAAACAGAAGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

688

Amino Acids

77.94

Weight (kDa)

8.69

Isoelectric Point (pI)

51.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50660
fragaria_vesca	FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650 FvH4_3g22650
malus_domestica	MD03G1201300.v1.1 MD11G1218700.v1.1
prunus_persica	Prupe.4G212500_v2.0.a1
pyrus_communis	pycom03g15260 pycom11g19260
rosa_chinensis	RchiOBHm_Chr5g0039421
rosa_laevigata	RLG00000033913
rosa_multiflora	Rmu_co8501983.1_g000001
rosa_roxburghii	Rroxscaffold_1G00040560 Rroxscaffold_1G00041790
rosa_rugosa	Rorug05G0179100
rosa_samantha	Rh5AG265700 Rh5BG270300 Rh5CG303300 Rh5DG278300
rosa_wichuraiana	Rw5G024900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1214, 1299
Acc65I	GGTACC	2 cut(s)	424, 1708
AccB1I	GGYRCC	5 cut(s)	24, 103, 424, 1708, 1970
AccII	CGCG	1 cut(s)	807
AciI	CCGC	9 cut(s)	47, 88, 127, 151, 327, 340, 805, 1881, 1964
AclI	AACGTT	1 cut(s)	38
AclWI	GGATC	5 cut(s)	557, 570, 1471, 1484, 1572
AcoI	YGGCCR	3 cut(s)	312, 412, 1762
AcsI	RAATTY	4 cut(s)	600, 1201, 1431, 1915
AcuI	CTGAAG	3 cut(s)	486, 1041, 1470
AcyI	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
AfaI	GTAC	7 cut(s)	372, 426, 594, 660, 941, 1438, 1710
AflII	CTTAAG	1 cut(s)	748
AflIII	ACRYGT	1 cut(s)	1117
AhdI	GACNNNNNGTC	1 cut(s)	826
AjnI	CCWGG	3 cut(s)	210, 314, 373
AjuI	GAANNNNNNNTTGG	2 cut(s)	603, 635
Alw21I	GWGCWC	2 cut(s)	691, 744
Alw26I	GTCTC	5 cut(s)	158, 350, 1477, 1639, 1919
AlwI	GGATC	5 cut(s)	557, 570, 1471, 1484, 1572
Ama87I	CYCGRG	3 cut(s)	99, 161, 1559
AoxI	GGCC	8 cut(s)	114, 129, 196, 300, 312, 412, 957, 1762
ApeKI	GCWGC	4 cut(s)	343, 1271, 1274, 1277
ApoI	RAATTY	4 cut(s)	600, 1201, 1431, 1915
Asp700I	GAANNNNTTC	1 cut(s)	512
Asp718I	GGTACC	2 cut(s)	424, 1708
AspA2I	CCTAGG	1 cut(s)	491
AspLEI	GCGC	3 cut(s)	210, 809, 1973
AspS9I	GGNCC	6 cut(s)	115, 129, 197, 235, 301, 2029
AsuC2I	CCSGG	6 cut(s)	22, 100, 101, 108, 118, 842
AsuHPI	GGTGA	3 cut(s)	56, 1379, 1526
AsuII	TTCGAA	1 cut(s)	1350
AsuNHI	GCTAGC	1 cut(s)	1415
AvaI	CYCGRG	3 cut(s)	99, 161, 1559
AvaII	GGWCC	2 cut(s)	235, 2029
AvrII	CCTAGG	1 cut(s)	491
BaeGI	GKGCMC	3 cut(s)	106, 219, 1600
BalI	TGGCCA	2 cut(s)	414, 1764
BamHI	GGATCC	2 cut(s)	562, 1476
BanI	GGYRCC	5 cut(s)	24, 103, 424, 1708, 1970
BanII	GRGCYC	2 cut(s)	691, 1574
BauI	CACGAG	1 cut(s)	684
BbsI	GAAGAC	2 cut(s)	101, 1017
Bbv12I	GWGCWC	2 cut(s)	691, 744
BbvI	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BccI	CCATC	4 cut(s)	703, 1087, 1563, 1609
BceAI	ACGGC	1 cut(s)	611
BcgI	CGANNNNNNTGC	4 cut(s)	93, 127, 1922, 1956
BciT130I	CCWGG	3 cut(s)	212, 316, 375
BciVI	GTATCC	1 cut(s)	1864
BcnI	CCSGG	6 cut(s)	22, 100, 101, 108, 118, 842
BcoDI	GTCTC	5 cut(s)	158, 350, 1477, 1639, 1919
BfaI	CTAG	7 cut(s)	392, 492, 674, 1416, 1799, 1842, 2062
BfmI	CTRYAG	1 cut(s)	344
BfoI	RGCGCY	2 cut(s)	211, 1974
BfrI	CTTAAG	1 cut(s)	748
BfuI	GTATCC	1 cut(s)	1864
BglII	AGATCT	3 cut(s)	58, 1192, 2058
BisI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
BlnI	CCTAGG	1 cut(s)	491
BlpI	GCTNAGC	1 cut(s)	669
BlsI	GCNGC	6 cut(s)	328, 342, 345, 1273, 1276, 1279
Bme1390I	CCNGG	9 cut(s)	22, 100, 101, 108, 118, 212, 316, 375, 842
Bme18I	GGWCC	2 cut(s)	235, 2029
BmeRI	GACNNNNNGTC	1 cut(s)	826
BmeT110I	CYCGRG	3 cut(s)	99, 161, 1559
BmgT120I	GGNCC	6 cut(s)	115, 129, 197, 235, 301, 2029
BmrFI	CCNGG	9 cut(s)	22, 100, 101, 108, 118, 212, 316, 375, 842
BmsI	GCATC	2 cut(s)	1129, 1942
BmtI	GCTAGC	1 cut(s)	1419
BpiI	GAAGAC	2 cut(s)	101, 1017
BplI	GAGNNNNNCTC	2 cut(s)	1688, 1720
BpmI	CTGGAG	1 cut(s)	1217
Bpu10I	CCTNAGC	1 cut(s)	996
Bpu1102I	GCTNAGC	1 cut(s)	669
Bpu14I	TTCGAA	1 cut(s)	1350
BpuEI	CTTGAG	5 cut(s)	161, 487, 725, 758, 1558
BpuMI	CCSGG	6 cut(s)	22, 100, 101, 108, 118, 842
BsaHI	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
BsaJI	CCNNGG	5 cut(s)	20, 99, 211, 491, 1420
BsaWI	WCCGGW	2 cut(s)	143, 352
BsaXI	ACNNNNNCTCC	4 cut(s)	417, 447, 1997, 2027
Bse1I	ACTGG	4 cut(s)	366, 566, 1478, 1490
Bse3DI	GCAATG	1 cut(s)	1462
BseBI	CCWGG	3 cut(s)	212, 316, 375
BseDI	CCNNGG	5 cut(s)	20, 99, 211, 491, 1420
BseGI	GGATG	1 cut(s)	1486
BseMI	GCAATG	1 cut(s)	1462
BseMII	CTCAG	6 cut(s)	69, 660, 858, 1069, 1650, 1914
BseNI	ACTGG	4 cut(s)	366, 566, 1478, 1490
BseRI	GAGGAG	4 cut(s)	266, 289, 796, 1172
BseSI	GKGCMC	3 cut(s)	106, 219, 1600
BseXI	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BseYI	CCCAGC	1 cut(s)	11
Bsh1236I	CGCG	1 cut(s)	807
Bsh1285I	CGRYCG	2 cut(s)	144, 1864
BshFI	GGCC	8 cut(s)	116, 131, 198, 302, 314, 414, 959, 1764
BshNI	GGYRCC	5 cut(s)	24, 103, 424, 1708, 1970
BsiEI	CGRYCG	2 cut(s)	144, 1864
BsiHKAI	GWGCWC	2 cut(s)	691, 744
BsiHKCI	CYCGRG	3 cut(s)	99, 161, 1559
BsiSI	CCGG	9 cut(s)	22, 50, 100, 108, 118, 132, 144, 353, 841
BslFI	GGGAC	1 cut(s)	1875
BsmAI	GTCTC	5 cut(s)	158, 350, 1477, 1639, 1919
BsmBI	CGTCTC	3 cut(s)	158, 350, 1919
BsmFI	GGGAC	1 cut(s)	1875
BsmI	GAATGC	2 cut(s)	693, 1959
BsnI	GGCC	8 cut(s)	116, 131, 198, 302, 314, 414, 959, 1764
BsoBI	CYCGRG	3 cut(s)	99, 161, 1559
Bsp119I	TTCGAA	1 cut(s)	1350
Bsp1286I	GDGCHC	6 cut(s)	106, 219, 691, 744, 1574, 1600
Bsp143I	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
Bsp1720I	GCTNAGC	1 cut(s)	669
Bsp19I	CCATGG	1 cut(s)	1420
BspACI	CCGC	9 cut(s)	47, 88, 127, 151, 327, 340, 805, 1881, 1964
BspANI	GGCC	8 cut(s)	116, 131, 198, 302, 314, 414, 959, 1764
BspCNI	CTCAG	6 cut(s)	68, 661, 859, 1068, 1649, 1915
BspFNI	CGCG	1 cut(s)	807
BspMAI	CTGCAG	1 cut(s)	348
BspOI	GCTAGC	1 cut(s)	1419
BspPI	GGATC	5 cut(s)	557, 570, 1471, 1484, 1572
BspQI	GCTCTTC	1 cut(s)	198
BspT104I	TTCGAA	1 cut(s)	1350
BspT107I	GGYRCC	5 cut(s)	24, 103, 424, 1708, 1970
BspTI	CTTAAG	1 cut(s)	748
BsrDI	GCAATG	1 cut(s)	1462
BsrI	ACTGG	4 cut(s)	366, 566, 1478, 1490
BssECI	CCNNGG	5 cut(s)	20, 99, 211, 491, 1420
BssMI	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
BssNI	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
BssSI	CACGAG	1 cut(s)	684
BssT1I	CCWWGG	2 cut(s)	491, 1420
Bst2BI	CACGAG	1 cut(s)	684
Bst2UI	CCWGG	3 cut(s)	212, 316, 375
Bst4CI	ACNGT	5 cut(s)	717, 1441, 1549, 1814, 2021
Bst6I	CTCTTC	4 cut(s)	198, 289, 845, 1031
BstACI	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
BstAFI	CTTAAG	1 cut(s)	748
BstBI	TTCGAA	1 cut(s)	1350
BstC8I	GCNNGC	9 cut(s)	17, 129, 324, 681, 691, 900, 993, 1417, 1883
BstDEI	CTNAG	8 cut(s)	55, 669, 867, 996, 1055, 1636, 1886, 1923
BstDSI	CCRYGG	1 cut(s)	1420
BstF5I	GGATG	1 cut(s)	1486
BstFNI	CGCG	1 cut(s)	807
BstH2I	RGCGCY	2 cut(s)	211, 1974
BstHHI	GCGC	3 cut(s)	210, 809, 1973
BstKTI	GATC	8 cut(s)	61, 478, 565, 1195, 1479, 1567, 1864, 2061
BstMAI	GTCTC	5 cut(s)	158, 350, 1477, 1639, 1919
BstMBI	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
BstMCI	CGRYCG	2 cut(s)	144, 1864
BstMWI	GCNNNNNNNGC	8 cut(s)	31, 214, 467, 931, 1148, 1277, 1701, 2044
BstNI	CCWGG	3 cut(s)	212, 316, 375
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	9 cut(s)	20, 98, 99, 106, 116, 210, 314, 373, 840
BstSFI	CTRYAG	1 cut(s)	344
BstSLI	GKGCMC	3 cut(s)	106, 219, 1600
BstUI	CGCG	1 cut(s)	807
BstV1I	GCAGC	4 cut(s)	330, 1258, 1261, 1264
BstV2I	GAAGAC	2 cut(s)	101, 1017
BstX2I	RGATCY	5 cut(s)	58, 562, 1192, 1476, 2058
BstXI	CCANNNNNNTGG	1 cut(s)	1772
BstYI	RGATCY	5 cut(s)	58, 562, 1192, 1476, 2058
BsuI	GTATCC	1 cut(s)	1864
BsuRI	GGCC	8 cut(s)	116, 131, 198, 302, 314, 414, 959, 1764
BtgI	CCRYGG	1 cut(s)	1420
BtsCI	GGATG	1 cut(s)	1486
BtsI	GCAGTG	2 cut(s)	1400, 1916
BtsIMutI	CAGTG	4 cut(s)	373, 766, 1400, 1916
Cac8I	GCNNGC	9 cut(s)	17, 129, 324, 681, 691, 900, 993, 1417, 1883
CfoI	GCGC	3 cut(s)	210, 809, 1973
Cfr13I	GGNCC	6 cut(s)	115, 129, 197, 235, 301, 2029
Cfr9I	CCCGGG	1 cut(s)	99
CseI	GACGC	2 cut(s)	175, 2027
Csp6I	GTAC	7 cut(s)	371, 425, 593, 659, 940, 1437, 1709
CviAII	CATG	8 cut(s)	541, 777, 794, 823, 931, 1048, 1421, 2042
CviQI	GTAC	7 cut(s)	371, 425, 593, 659, 940, 1437, 1709
DdeI	CTNAG	8 cut(s)	55, 669, 867, 996, 1055, 1636, 1886, 1923
DinI	GGCGCC	1 cut(s)	1972
DpnI	GATC	8 cut(s)	60, 477, 564, 1194, 1478, 1566, 1863, 2060
DpnII	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
DriI	GACNNNNNGTC	1 cut(s)	826
EaeI	YGGCCR	3 cut(s)	312, 412, 1762
Eam1104I	CTCTTC	4 cut(s)	198, 289, 845, 1031
Eam1105I	GACNNNNNGTC	1 cut(s)	826
EarI	CTCTTC	4 cut(s)	198, 289, 845, 1031
Ecl136II	GAGCTC	1 cut(s)	689
Eco130I	CCWWGG	2 cut(s)	491, 1420
Eco24I	GRGCYC	2 cut(s)	691, 1574
Eco32I	GATATC	2 cut(s)	1336, 1836
Eco47I	GGWCC	2 cut(s)	235, 2029
Eco53kI	GAGCTC	1 cut(s)	689
Eco57I	CTGAAG	3 cut(s)	486, 1041, 1470
Eco88I	CYCGRG	3 cut(s)	99, 161, 1559
EcoICRI	GAGCTC	1 cut(s)	689
EcoO109I	RGGNCCY	1 cut(s)	301
EcoRI	GAATTC	1 cut(s)	1915
EcoRII	CCWGG	3 cut(s)	210, 314, 373
EcoRV	GATATC	2 cut(s)	1336, 1836
EcoT14I	CCWWGG	2 cut(s)	491, 1420
EcoT38I	GRGCYC	2 cut(s)	691, 1574
EgeI	GGCGCC	1 cut(s)	1972
EheI	GGCGCC	1 cut(s)	1972
ErhI	CCWWGG	2 cut(s)	491, 1420
Esp3I	CGTCTC	3 cut(s)	158, 350, 1919
FaeI	CATG	8 cut(s)	544, 780, 797, 826, 934, 1051, 1424, 2045
FalI	AAGNNNNNCTT	2 cut(s)	1869, 1901
FaqI	GGGAC	1 cut(s)	1875
FatI	CATG	8 cut(s)	540, 776, 793, 822, 930, 1047, 1420, 2041
FauI	CCCGC	3 cut(s)	95, 120, 1874
Fnu4HI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
FokI	GGATG	1 cut(s)	1473
FriOI	GRGCYC	2 cut(s)	691, 1574
Fsp4HI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
FspBI	CTAG	7 cut(s)	392, 492, 674, 1416, 1799, 1842, 2062
GlaI	GCGC	3 cut(s)	209, 808, 1972
GluI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
GsaI	CCCAGC	1 cut(s)	15
GsuI	CTGGAG	1 cut(s)	1217
HaeII	RGCGCY	2 cut(s)	211, 1974
HaeIII	GGCC	8 cut(s)	116, 131, 198, 302, 314, 414, 959, 1764
HapII	CCGG	9 cut(s)	22, 50, 100, 108, 118, 132, 144, 353, 841
HgaI	GACGC	2 cut(s)	175, 2027
HhaI	GCGC	3 cut(s)	210, 809, 1973
Hin1I	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
Hin1II	CATG	8 cut(s)	544, 780, 797, 826, 934, 1051, 1424, 2045
Hin6I	GCGC	3 cut(s)	208, 807, 1971
HinP1I	GCGC	3 cut(s)	208, 807, 1971
HincII	GTYRAC	1 cut(s)	498
HindII	GTYRAC	1 cut(s)	498
HindIII	AAGCTT	3 cut(s)	320, 617, 1997
HinfI	GANTC	6 cut(s)	53, 853, 1043, 1444, 1461, 1615
HpaII	CCGG	9 cut(s)	22, 50, 100, 108, 118, 132, 144, 353, 841
HphI	GGTGA	3 cut(s)	56, 1379, 1526
Hpy166II	GTNNAC	3 cut(s)	371, 498, 1069
Hpy8I	GTNNAC	3 cut(s)	371, 498, 1069
HpyAV	CCTTC	7 cut(s)	188, 283, 1231, 1445, 1723, 1824, 1984
HpyCH4III	ACNGT	5 cut(s)	717, 1441, 1549, 1814, 2021
HpyCH4IV	ACGT	6 cut(s)	38, 379, 408, 1117, 1211, 1296
HpyCH4V	TGCA	7 cut(s)	346, 934, 1090, 1142, 1223, 1496, 1959
HpyF10VI	GCNNNNNNNGC	8 cut(s)	31, 214, 467, 931, 1148, 1277, 1701, 2044
HpyF3I	CTNAG	8 cut(s)	55, 669, 867, 996, 1055, 1636, 1886, 1923
HpySE526I	ACGT	6 cut(s)	38, 379, 408, 1117, 1211, 1296
Hsp92I	GRCGYC	4 cut(s)	167, 1211, 1296, 1971
Hsp92II	CATG	8 cut(s)	544, 780, 797, 826, 934, 1051, 1424, 2045
HspAI	GCGC	3 cut(s)	208, 807, 1971
KasI	GGCGCC	1 cut(s)	1970
KpnI	GGTACC	2 cut(s)	428, 1712
Kzo9I	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
LguI	GCTCTTC	1 cut(s)	198
LmnI	GCTCC	3 cut(s)	153, 700, 783
Lsp1109I	GCAGC	4 cut(s)	330, 1258, 1261, 1264
LweI	GCATC	2 cut(s)	1129, 1942
MaeI	CTAG	7 cut(s)	392, 492, 674, 1416, 1799, 1842, 2062
MaeII	ACGT	6 cut(s)	38, 379, 408, 1117, 1211, 1296
MaeIII	GTNAC	2 cut(s)	348, 443
MalI	GATC	8 cut(s)	60, 477, 564, 1194, 1478, 1566, 1863, 2060
MboI	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
MflI	RGATCY	5 cut(s)	58, 562, 1192, 1476, 2058
MhlI	GDGCHC	6 cut(s)	106, 219, 691, 744, 1574, 1600
MlsI	TGGCCA	2 cut(s)	414, 1764
MluNI	TGGCCA	2 cut(s)	414, 1764
Mly113I	GGCGCC	1 cut(s)	1971
MlyI	GAGTC	3 cut(s)	47, 862, 1453
MmeI	TCCRAC	4 cut(s)	164, 555, 1995, 2056
Mox20I	TGGCCA	2 cut(s)	414, 1764
MroXI	GAANNNNTTC	1 cut(s)	512
MscI	TGGCCA	2 cut(s)	414, 1764
MseI	TTAA	4 cut(s)	749, 891, 1359, 2049
MslI	CAYNNNNRTG	1 cut(s)	1512
Msp20I	TGGCCA	2 cut(s)	414, 1764
MspA1I	CMGCKG	1 cut(s)	329
MspCI	CTTAAG	1 cut(s)	748
MspI	CCGG	9 cut(s)	22, 50, 100, 108, 118, 132, 144, 353, 841
MspR9I	CCNGG	9 cut(s)	22, 100, 101, 108, 118, 212, 316, 375, 842
Mva1269I	GAATGC	2 cut(s)	693, 1959
MvaI	CCWGG	3 cut(s)	212, 316, 375
MvnI	CGCG	1 cut(s)	807
MwoI	GCNNNNNNNGC	8 cut(s)	31, 214, 467, 931, 1148, 1277, 1701, 2044
NarI	GGCGCC	1 cut(s)	1971
NciI	CCSGG	6 cut(s)	22, 100, 101, 108, 118, 842
NcoI	CCATGG	1 cut(s)	1420
NdeII	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
NheI	GCTAGC	1 cut(s)	1415
NlaIII	CATG	8 cut(s)	544, 780, 797, 826, 934, 1051, 1424, 2045
NmeAIII	GCCGAG	2 cut(s)	812, 1646
NspI	RCATGY	1 cut(s)	934
NspV	TTCGAA	1 cut(s)	1350
PaeR7I	CTCGAG	1 cut(s)	1559
PciSI	GCTCTTC	1 cut(s)	198
PctI	GAATGC	2 cut(s)	693, 1959
PdmI	GAANNNNTTC	1 cut(s)	512
PfeI	GAWTC	3 cut(s)	1043, 1461, 1615
PkrI	GCNGC	6 cut(s)	328, 342, 345, 1273, 1276, 1279
Ple19I	CGATCG	1 cut(s)	1864
PleI	GAGTC	3 cut(s)	47, 861, 1452
PluTI	GGCGCC	1 cut(s)	1974
PpsI	GAGTC	3 cut(s)	47, 861, 1452
Psp124BI	GAGCTC	1 cut(s)	691
Psp1406I	AACGTT	1 cut(s)	38
Psp6I	CCWGG	3 cut(s)	210, 314, 373
PspFI	CCCAGC	1 cut(s)	11
PspGI	CCWGG	3 cut(s)	210, 314, 373
PspPI	GGNCC	6 cut(s)	115, 129, 197, 235, 301, 2029
PsrI	GAACNNNNNNTAC	2 cut(s)	1666, 1698
PstI	CTGCAG	1 cut(s)	348
PsuI	RGATCY	5 cut(s)	58, 562, 1192, 1476, 2058
PvuI	CGATCG	1 cut(s)	1864
RsaI	GTAC	7 cut(s)	372, 426, 594, 660, 941, 1438, 1710
RsaNI	GTAC	7 cut(s)	371, 425, 593, 659, 940, 1437, 1709
RseI	CAYNNNNRTG	1 cut(s)	1512
SacI	GAGCTC	1 cut(s)	691
SapI	GCTCTTC	1 cut(s)	198
SaqAI	TTAA	4 cut(s)	749, 891, 1359, 2049
SatI	GCNGC	6 cut(s)	327, 341, 344, 1272, 1275, 1278
Sau3AI	GATC	8 cut(s)	58, 475, 562, 1192, 1476, 1564, 1861, 2058
Sau96I	GGNCC	6 cut(s)	115, 129, 197, 235, 301, 2029
SchI	GAGTC	3 cut(s)	47, 862, 1453
ScrFI	CCNGG	9 cut(s)	22, 100, 101, 108, 118, 212, 316, 375, 842
SduI	GDGCHC	6 cut(s)	106, 219, 691, 744, 1574, 1600
SfaNI	GCATC	2 cut(s)	1129, 1942
SfcI	CTRYAG	1 cut(s)	344
SfoI	GGCGCC	1 cut(s)	1972
Sfr274I	CTCGAG	1 cut(s)	1559
SfuI	TTCGAA	1 cut(s)	1350
SinI	GGWCC	2 cut(s)	235, 2029
SlaI	CTCGAG	1 cut(s)	1559
SmaI	CCCGGG	1 cut(s)	101
SmiMI	CAYNNNNRTG	1 cut(s)	1512
SmlI	CTYRAG	7 cut(s)	176, 502, 704, 737, 748, 1559, 1573
SmoI	CTYRAG	7 cut(s)	176, 502, 704, 737, 748, 1559, 1573
SsiI	CCGC	9 cut(s)	47, 88, 127, 151, 327, 340, 805, 1881, 1964
SspDI	GGCGCC	1 cut(s)	1970
SspI	AATATT	1 cut(s)	1288
SspMI	CTAG	7 cut(s)	392, 492, 674, 1416, 1799, 1842, 2062
SstI	GAGCTC	1 cut(s)	691
StyD4I	CCNGG	9 cut(s)	20, 98, 99, 106, 116, 210, 314, 373, 840
StyI	CCWWGG	2 cut(s)	491, 1420
TaaI	ACNGT	5 cut(s)	717, 1441, 1549, 1814, 2021
TaiI	ACGT	6 cut(s)	41, 382, 411, 1120, 1214, 1299
TaqI	TCGA	3 cut(s)	1350, 1560, 1823
TatI	WGTACW	1 cut(s)	658
TauI	GCSGC	2 cut(s)	329, 343
TfiI	GAWTC	3 cut(s)	1043, 1461, 1615
Tru1I	TTAA	4 cut(s)	749, 891, 1359, 2049
Tru9I	TTAA	4 cut(s)	749, 891, 1359, 2049
TscAI	CASTG	4 cut(s)	373, 766, 1400, 1916
TseI	GCWGC	4 cut(s)	343, 1271, 1274, 1277
TspDTI	ATGAA	9 cut(s)	17, 629, 765, 839, 1064, 1142, 1190, 1329, 1964
TspGWI	ACGGA	2 cut(s)	282, 425
TspMI	CCCGGG	1 cut(s)	99
TspRI	CASTG	4 cut(s)	373, 766, 1400, 1916
Vha464I	CTTAAG	1 cut(s)	748
VpaK11BI	GGWCC	2 cut(s)	235, 2029
XapI	RAATTY	4 cut(s)	600, 1201, 1431, 1915
XceI	RCATGY	1 cut(s)	934
XcmI	CCANNNNNNNNNTGG	2 cut(s)	538, 1846
XhoI	CTCGAG	1 cut(s)	1559
XmaI	CCCGGG	1 cut(s)	99
XmaJI	CCTAGG	1 cut(s)	491
XmnI	GAANNNNTTC	1 cut(s)	512
XspI	CTAG	7 cut(s)	392, 492, 674, 1416, 1799, 1842, 2062
ZraI	GACGTC	2 cut(s)	1212, 1297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.