Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009479

Physical Location & Seq

Genomic Coordinates Forward (+)

22234508 .. 22237685

Gene Structure 3178 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGCAGCAGCAGCCTCCGGTAGCGCCTCCACTACTTGCAAAACCCACTGCCTAATCGCCCCGCCGCTCGCAAAACCCTACTCCTCCTCCACGCAACTACCCTTCAAGTTCTGCAAATTTACCTCCCGCGCCACCGCTGCCCCTACTTCCATCTCCTGCACTCTCACCCGGGAATCTGCCGCTATTCAGATGGACGAAAAGAACGACAACGGCGCCTTCCAGGTTCTGCCTCGCCCCGATTCGTTCGGCCGGTTCGGAAAGTATGGCGGCAAGTACGTCCCCGAGACCTTAATGCACGCGCTCACCGAGCTCGAGGCCGCGTTTCACGCTCTCGCTGATGACGAAGGCTTTCAGAACGAATTGAATGGAATTTTGAAGGACTATGTTGGCAGGGAGACTCCACTCTACTTTGCGGAGCGGCTGACTGAGCACTACAAACGCCCCAATGGCGAAGGGCCTCACGTTTACCTGAAGAGGGAAGATCTTAACCATACTGGGGCTCATAAGATCAACAATGCCGTTGCCCAGGCATTGCTTGCTAAGAAATTGGGCAAGAAACGTATTATTGCTGAAACTGGAGCGGGACAACACGGCGTTGCCACTGCCACAGTTTGTGCTCGGTTTGGATTGCAGTGTATCATCTACATGGGTGCCCAAGATATGGAAAGGCAATCCCTCAATGTTTTCAGAATGCGGCTTCTAGGGGCTGAGGTTAGACCAGTCCATTCTGGGACAGCCACATTGAAGGATGCTACTTCAGAAGCAATAAGGGACTGGGTGACTAATGTAGAGACAACTCACTATATTTTGGGCTCTGTTGCTGGTCCACATCCATACCCTATGATGGTTCGTGATTTCCACAAGGTGATTGGTAGAGAAACAAGAAAACAAGCGCTGGAAAAGTGGGGAGGGAAACCAGATGTGTTGGTAGCTTGTGTTGGTGGAGGTTCAAATGCCATGGGACTCTTCCATGAGTTTGTTGACGATAAAGATGTCCGGCTGATTGGGGTGGAGGCTGCAGGCTTTGGATTGGACAGTGGGAAGCATGCTGCAACTTTGACCAAAGGGGAAGTCGGGGTCTTGCATGGAGCTATGAGTTACCTGTTACAGGATGATGATGGACAGATTATTGAGCCTCATTCTATAAGTGCAGGCCTGGATTACCCTGGAGTTGGTCCGGAGCATAGTTTTCTGAAAGACATGGGACGGGCTGAATACTATAGCATTACTGATGAAGAAGCATTAGAAGCTTTTAAACGATTATCTAGACTGGAGGGGATAATTCCAGCTCTGGAGACTTCTCATGCGCTGGCGTACTTAGAGAAGCTGTGCCCTACTCTCCCTGACGGGGCCAAAGTCGTGCTTAACTGCAGTGGCAGAGGGGATAAGGATGTTCAAACCGCCATCAAGCACTTGAAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004834 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009941 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019752 GO:0019904 GO:0031967 GO:0031975 GO:0032787 GO:0034641 GO:0034754 GO:0042401 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00400 ko01100 ko01110 ko01130 ko01230 map00260 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PALP

Protein Analysis

475

Amino Acids

51.42

Weight (kDa)

6.68

Isoelectric Point (pI)

27.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PALP	PF00291	130 - 459	2.4e-46	Pyridoxal-phosphate dependent enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27070 AT5G54810
fragaria_vesca	FvH4_2g15220 FvH4_3g22100
malus_domestica	MD03G1208800.v1.1 MD11G1223500.v1.1
prunus_persica	Prupe.4G207900_v2.0.a1
pyrus_communis	pycom03g15780 pycom11g19710
rosa_chinensis	RchiOBHm_Chr5g0037911 RchiOBHm_Chr6g0277971
rosa_laevigata	RLG00000033822
rosa_multiflora	Rmu_sc0001474.1_g000007 Rmu_sc0005416.1_g000042
rosa_roxburghii	Rroxscaffold_1G00042990 Rroxscaffold_7G00190640
rosa_rugosa	Rorug05G0169100
rosa_samantha	Rh5AG257600 Rh6CG230100 Rh6DG220900
rosa_wichuraiana	Rw5G023880 Rw6G019520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	212, 650
AccB7I	CCANNNNNTGG	1 cut(s)	661
AccBSI	CCGCTC	3 cut(s)	67, 418, 581
AccII	CGCG	3 cut(s)	129, 299, 320
AccIII	TCCGGA	1 cut(s)	1177
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	2 cut(s)	116, 369
AcuI	CTGAAG	2 cut(s)	491, 741
AcyI	GRCGYC	1 cut(s)	213
AdeI	CACNNNGTG	1 cut(s)	865
AfaI	GTAC	2 cut(s)	275, 1316
AfeI	AGCGCT	1 cut(s)	894
AfiI	CCNNNNNNNGG	7 cut(s)	475, 496, 661, 844, 1108, 1172, 1348
AgsI	TTSAA	7 cut(s)	106, 364, 376, 745, 951, 1397, 1417
AjnI	CCWGG	4 cut(s)	219, 525, 1155, 1165
AluBI	AGCT	7 cut(s)	310, 932, 1091, 1250, 1289, 1327, 1420
AluI	AGCT	7 cut(s)	310, 932, 1091, 1250, 1289, 1327, 1420
Alw21I	GWGCWC	3 cut(s)	312, 432, 619
Alw26I	GTCTC	4 cut(s)	278, 389, 785, 1289
AlwNI	CAGNNNCTG	1 cut(s)	226
Ama87I	CYCGRG	3 cut(s)	168, 281, 311
Aor13HI	TCCGGA	1 cut(s)	1177
Aor51HI	AGCGCT	1 cut(s)	894
AoxI	GGCC	5 cut(s)	247, 315, 455, 1153, 1350
ApeKI	GCWGC	6 cut(s)	5, 8, 11, 137, 1016, 1049
ApoI	RAATTY	2 cut(s)	116, 369
ArsI	GACNNNNNNTTYG	2 cut(s)	1056, 1088
Asp700I	GAANNNNTTC	1 cut(s)	348
AspLEI	GCGC	6 cut(s)	26, 131, 215, 301, 895, 1309
AspS9I	GGNCC	4 cut(s)	455, 824, 1175, 1350
AsuC2I	CCSGG	2 cut(s)	169, 170
AsuHPI	GGTGA	4 cut(s)	157, 295, 790, 877
AvaI	CYCGRG	3 cut(s)	168, 281, 311
AvaII	GGWCC	2 cut(s)	824, 1175
BaeGI	GKGCMC	2 cut(s)	655, 1334
BanI	GGYRCC	2 cut(s)	212, 650
BanII	GRGCYC	3 cut(s)	312, 502, 815
Bbv12I	GWGCWC	3 cut(s)	312, 432, 619
BbvCI	CCTCAGC	1 cut(s)	708
BbvI	GCAGC	6 cut(s)	17, 20, 23, 124, 1003, 1036
BccI	CCATC	5 cut(s)	158, 184, 838, 1112, 1412
BceAI	ACGGC	3 cut(s)	226, 503, 607
BciT130I	CCWGG	4 cut(s)	221, 527, 1157, 1167
BcnI	CCSGG	2 cut(s)	169, 170
BcoDI	GTCTC	4 cut(s)	278, 389, 785, 1289
BfaI	CTAG	2 cut(s)	701, 1266
BfmI	CTRYAG	3 cut(s)	1017, 1219, 1369
BfoI	RGCGCY	3 cut(s)	27, 216, 896
BglI	GCCNNNNNGGC	1 cut(s)	447
BglII	AGATCT	1 cut(s)	481
Bme1390I	CCNGG	6 cut(s)	169, 170, 221, 527, 1157, 1167
Bme18I	GGWCC	2 cut(s)	824, 1175
BmeT110I	CYCGRG	3 cut(s)	168, 281, 311
BmgT120I	GGNCC	4 cut(s)	455, 824, 1175, 1350
BmiI	GGNNCC	3 cut(s)	214, 652, 1351
BmrFI	CCNGG	6 cut(s)	169, 170, 221, 527, 1157, 1167
BmrI	ACTGGG	2 cut(s)	504, 784
BmsI	GCATC	1 cut(s)	739
BmuI	ACTGGG	2 cut(s)	504, 784
BpmI	CTGGAG	4 cut(s)	597, 1188, 1292, 1313
Bpu10I	CCTNAGC	1 cut(s)	708
BpuMI	CCSGG	2 cut(s)	169, 170
BsaHI	GRCGYC	1 cut(s)	213
BsaI	GGTCTC	1 cut(s)	278
BsaJI	CCNNGG	4 cut(s)	168, 525, 957, 1165
BsaWI	WCCGGW	2 cut(s)	17, 1177
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	7 cut(s)	475, 496, 661, 844, 1108, 1172, 1348
Bse118I	RCCGGY	1 cut(s)	249
Bse1I	ACTGG	5 cut(s)	499, 580, 719, 779, 1275
Bse3DI	GCAATG	1 cut(s)	530
BseAI	TCCGGA	1 cut(s)	1177
BseBI	CCWGG	4 cut(s)	221, 527, 1157, 1167
BseDI	CCNNGG	4 cut(s)	168, 525, 957, 1165
BseGI	GGATG	4 cut(s)	754, 829, 1117, 1396
BseLI	CCNNNNNNNGG	7 cut(s)	475, 496, 661, 844, 1108, 1172, 1348
BseMI	GCAATG	1 cut(s)	530
BseMII	CTCAG	2 cut(s)	417, 699
BseNI	ACTGG	5 cut(s)	499, 580, 719, 779, 1275
BseRI	GAGGAG	2 cut(s)	73, 76
BseSI	GKGCMC	2 cut(s)	655, 1334
BseX3I	CGGCCG	1 cut(s)	247
BseXI	GCAGC	6 cut(s)	17, 20, 23, 124, 1003, 1036
BsgI	GTGCAG	2 cut(s)	142, 1170
Bsh1236I	CGCG	3 cut(s)	129, 299, 320
Bsh1285I	CGRYCG	1 cut(s)	250
BshFI	GGCC	5 cut(s)	249, 317, 457, 1155, 1352
BshNI	GGYRCC	2 cut(s)	212, 650
BsiEI	CGRYCG	1 cut(s)	250
BsiHKAI	GWGCWC	3 cut(s)	312, 432, 619
BsiHKCI	CYCGRG	3 cut(s)	168, 281, 311
BsiSI	CCGG	5 cut(s)	18, 169, 250, 997, 1178
BslFI	GGGAC	6 cut(s)	263, 597, 745, 785, 975, 1218
BslI	CCNNNNNNNGG	7 cut(s)	475, 496, 661, 844, 1108, 1172, 1348
BsmAI	GTCTC	4 cut(s)	278, 389, 785, 1289
BsmFI	GGGAC	6 cut(s)	263, 597, 745, 785, 975, 1218
BsmI	GAATGC	1 cut(s)	696
BsnI	GGCC	5 cut(s)	249, 317, 457, 1155, 1352
Bso31I	GGTCTC	1 cut(s)	278
BsoBI	CYCGRG	3 cut(s)	168, 281, 311
Bsp1286I	GDGCHC	7 cut(s)	312, 432, 502, 619, 655, 815, 1334
Bsp13I	TCCGGA	1 cut(s)	1177
Bsp143I	GATC	2 cut(s)	481, 507
Bsp19I	CCATGG	1 cut(s)	957
BspANI	GGCC	5 cut(s)	249, 317, 457, 1155, 1352
BspCNI	CTCAG	2 cut(s)	418, 700
BspEI	TCCGGA	1 cut(s)	1177
BspFNI	CGCG	3 cut(s)	129, 299, 320
BspLI	GGNNCC	3 cut(s)	214, 652, 1351
BspMAI	CTGCAG	2 cut(s)	1021, 1373
BspT107I	GGYRCC	2 cut(s)	212, 650
BspTNI	GGTCTC	1 cut(s)	278
BsrBI	CCGCTC	3 cut(s)	67, 418, 581
BsrDI	GCAATG	1 cut(s)	530
BsrFI	RCCGGY	1 cut(s)	249
BsrI	ACTGG	5 cut(s)	499, 580, 719, 779, 1275
BssAI	RCCGGY	1 cut(s)	249
BssECI	CCNNGG	4 cut(s)	168, 525, 957, 1165
BssMI	GATC	2 cut(s)	481, 507
BssNI	GRCGYC	1 cut(s)	213
BssT1I	CCWWGG	1 cut(s)	957
Bst2UI	CCWGG	4 cut(s)	221, 527, 1157, 1167
Bst4CI	ACNGT	2 cut(s)	610, 1037
Bst6I	CTCTTC	2 cut(s)	467, 971
BstACI	GRCGYC	1 cut(s)	213
BstAPI	GCANNNNNTGC	1 cut(s)	536
BstC8I	GCNNGC	7 cut(s)	69, 297, 537, 1021, 1047, 1153, 1311
BstDEI	CTNAG	4 cut(s)	426, 540, 708, 1318
BstDSI	CCRYGG	1 cut(s)	957
BstENI	CCTNNNNNAGG	1 cut(s)	1106
BstF5I	GGATG	4 cut(s)	754, 829, 1117, 1396
BstFNI	CGCG	3 cut(s)	129, 299, 320
BstH2I	RGCGCY	3 cut(s)	27, 216, 896
BstHHI	GCGC	6 cut(s)	26, 131, 215, 301, 895, 1309
BstKTI	GATC	2 cut(s)	484, 510
BstMAI	GTCTC	4 cut(s)	278, 389, 785, 1289
BstMBI	GATC	2 cut(s)	481, 507
BstMCI	CGRYCG	1 cut(s)	250
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 137, 307, 326, 427, 447, 536, 1247, 1417
BstNI	CCWGG	4 cut(s)	221, 527, 1157, 1167
BstNSI	RCATGY	1 cut(s)	1049
BstSCI	CCNGG	6 cut(s)	167, 168, 219, 525, 1155, 1165
BstSFI	CTRYAG	3 cut(s)	1017, 1219, 1369
BstSLI	GKGCMC	2 cut(s)	655, 1334
BstUI	CGCG	3 cut(s)	129, 299, 320
BstV1I	GCAGC	6 cut(s)	17, 20, 23, 124, 1003, 1036
BstX2I	RGATCY	1 cut(s)	481
BstYI	RGATCY	1 cut(s)	481
BstZI	CGGCCG	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	249, 317, 457, 1155, 1352
BtgI	CCRYGG	1 cut(s)	957
BtsCI	GGATG	4 cut(s)	754, 829, 1117, 1396
BtsI	GCAGTG	4 cut(s)	46, 600, 638, 1378
BtsIMutI	CAGTG	5 cut(s)	46, 600, 638, 1042, 1378
Cac8I	GCNNGC	7 cut(s)	69, 297, 537, 1021, 1047, 1153, 1311
CaiI	CAGNNNCTG	1 cut(s)	226
CfoI	GCGC	6 cut(s)	26, 131, 215, 301, 895, 1309
Cfr10I	RCCGGY	1 cut(s)	249
Cfr13I	GGNCC	4 cut(s)	455, 824, 1175, 1350
Cfr9I	CCCGGG	1 cut(s)	168
Csp6I	GTAC	2 cut(s)	274, 1315
CviAII	CATG	7 cut(s)	646, 958, 971, 1046, 1085, 1201, 1304
CviQI	GTAC	2 cut(s)	274, 1315
DdeI	CTNAG	4 cut(s)	426, 540, 708, 1318
DinI	GGCGCC	1 cut(s)	214
DpnI	GATC	2 cut(s)	483, 509
DpnII	GATC	2 cut(s)	481, 507
DraI	TTTAAA	1 cut(s)	1255
DraIII	CACNNNGTG	1 cut(s)	865
EaeI	YGGCCR	1 cut(s)	247
EagI	CGGCCG	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	467, 971
EarI	CTCTTC	2 cut(s)	467, 971
Ecl136II	GAGCTC	1 cut(s)	310
EclXI	CGGCCG	1 cut(s)	247
Eco130I	CCWWGG	1 cut(s)	957
Eco147I	AGGCCT	1 cut(s)	1155
Eco24I	GRGCYC	3 cut(s)	312, 502, 815
Eco31I	GGTCTC	1 cut(s)	278
Eco47I	GGWCC	2 cut(s)	824, 1175
Eco47III	AGCGCT	1 cut(s)	894
Eco52I	CGGCCG	1 cut(s)	247
Eco53kI	GAGCTC	1 cut(s)	310
Eco57I	CTGAAG	2 cut(s)	491, 741
Eco88I	CYCGRG	3 cut(s)	168, 281, 311
EcoICRI	GAGCTC	1 cut(s)	310
EcoNI	CCTNNNNNAGG	1 cut(s)	1106
EcoO109I	RGGNCCY	1 cut(s)	455
EcoRII	CCWGG	4 cut(s)	219, 525, 1155, 1165
EcoT14I	CCWWGG	1 cut(s)	957
EcoT38I	GRGCYC	3 cut(s)	312, 502, 815
EgeI	GGCGCC	1 cut(s)	214
EheI	GGCGCC	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	957
FaeI	CATG	7 cut(s)	649, 961, 974, 1049, 1088, 1204, 1307
FalI	AAGNNNNNCTT	2 cut(s)	1347, 1379
FaqI	GGGAC	6 cut(s)	263, 597, 745, 785, 975, 1218
FatI	CATG	7 cut(s)	645, 957, 970, 1045, 1084, 1200, 1303
FauI	CCCGC	3 cut(s)	69, 134, 574
FokI	GGATG	4 cut(s)	761, 816, 1124, 1403
FriOI	GRGCYC	3 cut(s)	312, 502, 815
FspBI	CTAG	2 cut(s)	701, 1266
GlaI	GCGC	6 cut(s)	25, 130, 214, 300, 894, 1308
GsuI	CTGGAG	4 cut(s)	597, 1188, 1292, 1313
HaeII	RGCGCY	3 cut(s)	27, 216, 896
HaeIII	GGCC	5 cut(s)	249, 317, 457, 1155, 1352
HapII	CCGG	5 cut(s)	18, 169, 250, 997, 1178
HhaI	GCGC	6 cut(s)	26, 131, 215, 301, 895, 1309
Hin1I	GRCGYC	1 cut(s)	213
Hin1II	CATG	7 cut(s)	649, 961, 974, 1049, 1088, 1204, 1307
Hin6I	GCGC	6 cut(s)	24, 129, 213, 299, 893, 1307
HinP1I	GCGC	6 cut(s)	24, 129, 213, 299, 893, 1307
HincII	GTYRAC	1 cut(s)	982
HindII	GTYRAC	1 cut(s)	982
HindIII	AAGCTT	2 cut(s)	1248, 1418
HinfI	GANTC	4 cut(s)	173, 239, 397, 963
HpaII	CCGG	5 cut(s)	18, 169, 250, 997, 1178
HphI	GGTGA	4 cut(s)	157, 295, 790, 877
Hpy166II	GTNNAC	3 cut(s)	466, 827, 982
Hpy188I	TCNGA	6 cut(s)	189, 257, 354, 689, 760, 1194
Hpy188III	TCNNGA	4 cut(s)	851, 1178, 1266, 1292
Hpy8I	GTNNAC	3 cut(s)	466, 827, 982
HpyAV	CCTTC	6 cut(s)	112, 226, 338, 370, 446, 739
HpyCH4III	ACNGT	2 cut(s)	610, 1037
HpyCH4IV	ACGT	3 cut(s)	276, 462, 559
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 137, 307, 326, 427, 447, 536, 1247, 1417
HpyF3I	CTNAG	4 cut(s)	426, 540, 708, 1318
HpySE526I	ACGT	3 cut(s)	276, 462, 559
Hsp92I	GRCGYC	1 cut(s)	213
Hsp92II	CATG	7 cut(s)	649, 961, 974, 1049, 1088, 1204, 1307
HspAI	GCGC	6 cut(s)	24, 129, 213, 299, 893, 1307
KasI	GGCGCC	1 cut(s)	212
Kpn2I	TCCGGA	1 cut(s)	1177
Kzo9I	GATC	2 cut(s)	481, 507
LmnI	GCTCC	4 cut(s)	415, 578, 1088, 1180
Lsp1109I	GCAGC	6 cut(s)	17, 20, 23, 124, 1003, 1036
LweI	GCATC	1 cut(s)	739
MaeI	CTAG	2 cut(s)	701, 1266
MaeII	ACGT	3 cut(s)	276, 462, 559
MaeIII	GTNAC	3 cut(s)	778, 1097, 1104
MalI	GATC	2 cut(s)	483, 509
MbiI	CCGCTC	3 cut(s)	67, 418, 581
MboI	GATC	2 cut(s)	481, 507
MboII	GAAGA	4 cut(s)	484, 491, 958, 1247
MflI	RGATCY	1 cut(s)	481
MhlI	GDGCHC	7 cut(s)	312, 432, 502, 619, 655, 815, 1334
MluCI	AATT	5 cut(s)	116, 359, 369, 545, 1281
Mly113I	GGCGCC	1 cut(s)	213
MlyI	GAGTC	2 cut(s)	391, 957
MroI	TCCGGA	1 cut(s)	1177
MroXI	GAANNNNTTC	1 cut(s)	348
MseI	TTAA	5 cut(s)	290, 486, 1254, 1365, 1423
MslI	CAYNNNNRTG	1 cut(s)	644
MspA1I	CMGCKG	1 cut(s)	137
MspI	CCGG	5 cut(s)	18, 169, 250, 997, 1178
MspR9I	CCNGG	6 cut(s)	169, 170, 221, 527, 1157, 1167
Mva1269I	GAATGC	1 cut(s)	696
MvaI	CCWGG	4 cut(s)	221, 527, 1157, 1167
MvnI	CGCG	3 cut(s)	129, 299, 320
MwoI	GCNNNNNNNGC	9 cut(s)	11, 137, 307, 326, 427, 447, 536, 1247, 1417
NarI	GGCGCC	1 cut(s)	213
NciI	CCSGG	2 cut(s)	169, 170
NcoI	CCATGG	1 cut(s)	957
NdeII	GATC	2 cut(s)	481, 507
NlaIII	CATG	7 cut(s)	649, 961, 974, 1049, 1088, 1204, 1307
NlaIV	GGNNCC	3 cut(s)	214, 652, 1351
NmuCI	GTSAC	1 cut(s)	778
NspI	RCATGY	1 cut(s)	1049
PaeI	GCATGC	1 cut(s)	1049
PaeR7I	CTCGAG	1 cut(s)	311
PceI	AGGCCT	1 cut(s)	1155
PcsI	WCGNNNNNNNCGW	3 cut(s)	201, 303, 339
PctI	GAATGC	1 cut(s)	696
PdmI	GAANNNNTTC	1 cut(s)	348
PfeI	GAWTC	2 cut(s)	173, 239
PflMI	CCANNNNNTGG	1 cut(s)	661
PleI	GAGTC	2 cut(s)	391, 957
PluTI	GGCGCC	1 cut(s)	216
PpsI	GAGTC	2 cut(s)	391, 957
Psp124BI	GAGCTC	1 cut(s)	312
Psp6I	CCWGG	4 cut(s)	219, 525, 1155, 1165
PspGI	CCWGG	4 cut(s)	219, 525, 1155, 1165
PspN4I	GGNNCC	3 cut(s)	214, 652, 1351
PspPI	GGNCC	4 cut(s)	455, 824, 1175, 1350
PspXI	VCTCGAGB	1 cut(s)	311
PstI	CTGCAG	2 cut(s)	1021, 1373
PstNI	CAGNNNCTG	1 cut(s)	226
PsuI	RGATCY	1 cut(s)	481
RsaI	GTAC	2 cut(s)	275, 1316
RsaNI	GTAC	2 cut(s)	274, 1315
RseI	CAYNNNNRTG	1 cut(s)	644
SacI	GAGCTC	1 cut(s)	312
SaqAI	TTAA	5 cut(s)	290, 486, 1254, 1365, 1423
Sau3AI	GATC	2 cut(s)	481, 507
Sau96I	GGNCC	4 cut(s)	455, 824, 1175, 1350
SchI	GAGTC	2 cut(s)	391, 957
ScrFI	CCNGG	6 cut(s)	169, 170, 221, 527, 1157, 1167
SduI	GDGCHC	7 cut(s)	312, 432, 502, 619, 655, 815, 1334
SfaNI	GCATC	1 cut(s)	739
SfcI	CTRYAG	3 cut(s)	1017, 1219, 1369
SfoI	GGCGCC	1 cut(s)	214
Sfr274I	CTCGAG	1 cut(s)	311
SinI	GGWCC	2 cut(s)	824, 1175
SlaI	CTCGAG	1 cut(s)	311
SmaI	CCCGGG	1 cut(s)	170
SmiMI	CAYNNNNRTG	1 cut(s)	644
SmlI	CTYRAG	1 cut(s)	311
SmoI	CTYRAG	1 cut(s)	311
SphI	GCATGC	1 cut(s)	1049
Sse9I	AATT	5 cut(s)	116, 359, 369, 545, 1281
SseBI	AGGCCT	1 cut(s)	1155
SspDI	GGCGCC	1 cut(s)	212
SspMI	CTAG	2 cut(s)	701, 1266
SstI	GAGCTC	1 cut(s)	312
StuI	AGGCCT	1 cut(s)	1155
StyD4I	CCNGG	6 cut(s)	167, 168, 219, 525, 1155, 1165
StyI	CCWWGG	1 cut(s)	957
TaaI	ACNGT	2 cut(s)	610, 1037
TaiI	ACGT	3 cut(s)	279, 465, 562
TaqI	TCGA	1 cut(s)	312
TasI	AATT	5 cut(s)	116, 359, 369, 545, 1281
TauI	GCSGC	6 cut(s)	67, 182, 270, 320, 421, 697
TfiI	GAWTC	2 cut(s)	173, 239
Tru1I	TTAA	5 cut(s)	290, 486, 1254, 1365, 1423
Tru9I	TTAA	5 cut(s)	290, 486, 1254, 1365, 1423
TscAI	CASTG	5 cut(s)	53, 607, 638, 1042, 1378
TseFI	GTSAC	1 cut(s)	778
TseI	GCWGC	6 cut(s)	5, 8, 11, 137, 1016, 1049
Tsp45I	GTSAC	1 cut(s)	778
TspDTI	ATGAA	1 cut(s)	1248
TspMI	CCCGGG	1 cut(s)	168
TspRI	CASTG	5 cut(s)	53, 607, 638, 1042, 1378
Van91I	CCANNNNNTGG	1 cut(s)	661
VpaK11BI	GGWCC	2 cut(s)	824, 1175
XagI	CCTNNNNNAGG	1 cut(s)	1106
XapI	RAATTY	2 cut(s)	116, 369
XbaI	TCTAGA	1 cut(s)	1265
XceI	RCATGY	1 cut(s)	1049
XcmI	CCANNNNNNNNNTGG	1 cut(s)	866
XhoI	CTCGAG	1 cut(s)	311
XmaI	CCCGGG	1 cut(s)	168
XmnI	GAANNNNTTC	1 cut(s)	348
XspI	CTAG	2 cut(s)	701, 1266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.