Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0006487

Physical Location & Seq

Genomic Coordinates Forward (+)

29222547 .. 29227348

Gene Structure 4802 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGTTTAGCGGTTCTTCTAGTGCCGATTTTGACTTGACTGGCTGCATTTCTAAGATAGTTGACGAGCAAAGGGAAATCAGACAACTTCTTCACAATTTTGATCCTCCAATGTTGATATCAACTAGACGACAACGTCGACAAGCATTTAAAGAAAAACTGCAACAAGGAATTCTACGTCCTGATGATATTGATGTCTCATTCGAAAGTTTTCCATATTACCTAAGATCATCATATGATACTGAACTAGCTTCCCTTATTGTGATTGGTCCATATGTAGTTGGACTCTTATTGGTAAATTCTGCGCTCAGACCTTTCCTCATTTTTCATTTTTACAGTGAAACAACAAAGAAGGTTCTGATTGCATCCACCCTCCCGAATTTGAGGTGTAGCAAGTTTGGAAAATATTTTTCATCACTTCCTACCGCGAGCCCGCGCATATTATTATCTGGTCCAGCAGGTTCTGAGATATATCAGGAAACCTTGGCAAAGGCACTCGCGAAACATTTTGGTGCTAGATTACTAATTGTAGATTCTCTTCTCCTGCCTGGTGTTCAGGCACCACCGCCCAAGGATTCTGATTCTGTTAAAGAAGTGCCAAGGCATGAAAGTGTTTCCACTCATGCAATCGGCGAACTTCGTCTTGAGGTACTCGTCTCCTTGTATGGTTCTGGAGGTGATGATATTGACAGTCTTTCAATCGGTGAAGTTCTTGAGGTAGCAACCAATATCTGCACCAATGTTGAACAGGTGGCAACCAATGAGAGTAAAAGTCTTCCTTTGATAGTGTTTTTGAAAGATATAGAAAAGGTTATGGCAGGTAACCCCAATGCATATAGTGTCTTGAAGAGTAAGCTTTCAAACTTGCCAGAGAATGTTGTTGTGATCGGCTCTCATACCCAGTTGGACAATCGCAAGGAAAAGGATAACCTTGGTGGTAGGCTGCATGATAGGAGCAAAGAAACTTCTAAAACTATGAAGCAAGTTCAACTCTCTCGGATTTTCCCCAACAAAGTGACCATGCCCCAGGATGAGGCTTTACTTTCGGACTGGAAGCAGCAGTTTGAACGTGATGTTGAAACTTTGAAATCGCAGTCTAATATTGTTACCATTCGCTCAGTTCTTAACCGAGTTTCTGTGGATTGCCCTGACCTTGAAAGTCTGTGCATTAAAGATCTAGTGCTTACAACTGAAAGTGTTGATAAAGTAGTAGGCTGGGCTGTTAGTCACCATCTTATGCATTGTTCAGACGCTTTAGTTAAAGATGACAAACTTGTTATTTCTACTGAAAGTCTTAAGAATGGACTAAACATTCTACAAGGCATTCAAAACGAAAACAAGAGCATAAAGAAATCACTTAAGGATGTGGTTACTGGAAATGAATTTGAGAAAAAACTTCTTGCTGATGTTATTCCACCAAGCGATATTGGGGTTACTTTTGATGACATCGGGGCCTTGGAAAATGTGAAGGACACCCTAAAGGAGTTGACTATGCTTGCAAAGGCTGTTGCAACTGAAGCTGGTGCAAACTTTATTAACGTATCAATGTCAAGTATTACTTCAGAGTGGTTTGGGGAAGGAGAGAAGTACGTTAAAGCGGTGTTCTCCTTGGCTAGTAAAATTGCCCCTAGTGTTGTTTTTGTTGATGAGGTTGACAGCATGTTAGGCAGACGTGAAAATCCTGGGGAACATGAGGCTATGCGTAAAATGAAAAATGAGTTCATGGTTAACTGGGATGGTCTGCGTACAAAGGAGAAAGAACGTGTATTGGTACTTGCTGCTACTAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCGAGGAGATTGATGGTGAACTTGCCAGATGCCCAGAACAGAGAAAAAATACTGAGAGTTGTATTGGCCAAAGAAGATTTGGAACCTGACGTTGATTTGGAAGCAGTTGCAAATATGACAGATGGGTATTCGGGAAGTGACTTAAAGAATCTATGTGTTGCTGCAGCTCACCTCCCCATTAGGGAAATTTTAGAGAAAGAGAGAAAGGAGAGAAGTTTAGCTTTGGCGGAGAACAGACCTGTACCGGAGTTGTACTGCAGTACCGACATTCGTCCCTTGAAGATGGAGGACTTCAAACATGCGCATGAGCAGGTGTTTGCAAGTGTGTCATCGGAGTCGACAAATATGCGTGAGCTCCTCCAATGGAATGACCTATACGGCGAAGGCGGATCAAGAAAGAAGACGTATCTCAGCTATTTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003008 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0007610 GO:0007611 GO:0007612 GO:0007613 GO:0008150 GO:0009893 GO:0010604 GO:0010646 GO:0010648 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0023051 GO:0023057 GO:0030100 GO:0031323 GO:0031325 GO:0032501 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044456 GO:0044459 GO:0044464 GO:0045202 GO:0045211 GO:0045807 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050804 GO:0050805 GO:0050877 GO:0050890 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051966 GO:0051967 GO:0060255 GO:0060627 GO:0065007 GO:0071944 GO:0097060 GO:0098590 GO:0098794 GO:0099177

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FHA

Protein Analysis

750

Amino Acids

83.67

Weight (kDa)

5.78

Isoelectric Point (pI)

38.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	379 - 439	9.2e-27	Domain of unknown function (DUF7751)
AAA	PF00004	496 - 615	1.5e-28	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	638 - 674	1.3e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02890 AT1G02890 AT4G02480
fragaria_vesca	FvH4_2g25490 FvH4_2g25490 FvH4_2g25490
malus_domestica	MD03G1285800.v1.1 MD11G1305200.v1.1 MD11G1305300.v1.1 MD11G1305400.v1.1
prunus_persica	Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1
pyrus_communis	pycom03g22650 pycom11g26700 pycom11g26720
rosa_chinensis	RchiOBHm_Chr6g0293701
rosa_laevigata	RLG00000011931
rosa_roxburghii	Rroxscaffold_7G00173960
rosa_rugosa	Rorug06G0237500
rosa_samantha	Rh6AG350200 Rh6BG357700 Rh6CG364500 Rh6DG351400
rosa_wichuraiana	Rw6G030490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2125
AasI	GACNNNNNNGTC	1 cut(s)	132
Acc16I	TGCGCA	1 cut(s)	2127
Acc36I	ACCTGC	3 cut(s)	446, 806, 2125
AccB1I	GGYRCC	1 cut(s)	556
AccI	GTMKAC	2 cut(s)	136, 2162
AccII	CGCG	3 cut(s)	425, 433, 497
AciI	CCGC	7 cut(s)	9, 423, 431, 563, 1595, 2051, 2211
AclWI	GGATC	2 cut(s)	95, 2221
AcoI	YGGCCR	1 cut(s)	1890
AcsI	RAATTY	5 cut(s)	168, 295, 376, 1379, 2010
AcuI	CTGAAG	2 cut(s)	1533, 1542
AfaI	GTAC	7 cut(s)	648, 1586, 1744, 1770, 2067, 2078, 2086
AfiI	CCNNNNNNNGG	3 cut(s)	1030, 1804, 2005
AflII	CTTAAG	2 cut(s)	1292, 1355
AflIII	ACRYGT	1 cut(s)	1759
AjiI	CACGTC	1 cut(s)	1670
AjnI	CCWGG	3 cut(s)	544, 1023, 1678
AluBI	AGCT	7 cut(s)	248, 853, 1517, 1991, 2045, 2179, 2238
AluI	AGCT	7 cut(s)	248, 853, 1517, 1991, 2045, 2179, 2238
Alw21I	GWGCWC	1 cut(s)	2181
Alw26I	GTCTC	2 cut(s)	199, 658
AlwI	GGATC	2 cut(s)	95, 2221
AlwNI	CAGNNNCTG	1 cut(s)	461
AoxI	GGCC	3 cut(s)	1449, 1787, 1890
ApeKI	GCWGC	6 cut(s)	42, 940, 1054, 1775, 1985, 1988
ApoI	RAATTY	5 cut(s)	168, 295, 376, 1379, 2010
Asp700I	GAANNNNTTC	1 cut(s)	207
AspLEI	GCGC	3 cut(s)	304, 435, 2128
AspS9I	GGNCC	3 cut(s)	266, 449, 1449
AsuHPI	GGTGA	5 cut(s)	686, 713, 1217, 1852, 1985
AsuII	TTCGAA	1 cut(s)	201
AvaII	GGWCC	2 cut(s)	266, 449
BaeI	ACNNNNGTAYC	2 cut(s)	2068, 2101
BalI	TGGCCA	1 cut(s)	1892
BanI	GGYRCC	1 cut(s)	556
BanII	GRGCYC	2 cut(s)	431, 2181
BarI	GAAGNNNNNNTAC	2 cut(s)	519, 551
BbsI	GAAGAC	2 cut(s)	764, 2231
Bbv12I	GWGCWC	1 cut(s)	2181
BbvI	GCAGC	6 cut(s)	29, 927, 1066, 1762, 1972, 2000
BccI	CCATC	5 cut(s)	1236, 1727, 1831, 1940, 2101
BceAI	ACGGC	1 cut(s)	2218
BcgI	CGANNNNNNTGC	2 cut(s)	2152, 2186
BciT130I	CCWGG	3 cut(s)	546, 1025, 1680
BcoDI	GTCTC	2 cut(s)	199, 658
BfaI	CTAG	7 cut(s)	18, 123, 245, 513, 1175, 1611, 1626
BfmI	CTRYAG	2 cut(s)	1986, 2080
BfrI	CTTAAG	2 cut(s)	1292, 1355
BfuAI	ACCTGC	3 cut(s)	446, 806, 2125
BglII	AGATCT	1 cut(s)	1171
BisI	GCNGC	6 cut(s)	43, 941, 1055, 1776, 1986, 1989
BlsI	GCNGC	6 cut(s)	44, 942, 1056, 1777, 1987, 1990
Bme1390I	CCNGG	3 cut(s)	546, 1025, 1680
Bme18I	GGWCC	2 cut(s)	266, 449
BmgBI	CACGTC	1 cut(s)	1670
BmgT120I	GGNCC	3 cut(s)	266, 449, 1449
BmiI	GGNNCC	3 cut(s)	558, 1450, 1908
BmrFI	CCNGG	3 cut(s)	546, 1025, 1680
BmrI	ACTGGG	2 cut(s)	892, 1738
BmsI	GCATC	2 cut(s)	371, 1843
BmuI	ACTGGG	2 cut(s)	892, 1738
BoxI	GACNNNNGTC	1 cut(s)	2094
BpiI	GAAGAC	2 cut(s)	764, 2231
BpmI	CTGGAG	1 cut(s)	690
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	2 cut(s)	662, 731
BsaJI	CCNNGG	9 cut(s)	480, 567, 596, 928, 1023, 1452, 1605, 1679, 1826
BsaWI	WCCGGW	1 cut(s)	2068
Bsc4I	CCNNNNNNNGG	3 cut(s)	1030, 1804, 2005
Bse1I	ACTGG	5 cut(s)	43, 898, 1052, 1375, 1733
BseBI	CCWGG	3 cut(s)	546, 1025, 1680
BseDI	CCNNGG	9 cut(s)	480, 567, 596, 928, 1023, 1452, 1605, 1679, 1826
BseGI	GGATG	4 cut(s)	362, 1033, 1366, 1738
BseLI	CCNNNNNNNGG	3 cut(s)	1030, 1804, 2005
BseMII	CTCAG	5 cut(s)	319, 453, 1128, 1868, 2248
BseNI	ACTGG	5 cut(s)	43, 898, 1052, 1375, 1733
BseRI	GAGGAG	2 cut(s)	1843, 2171
BseXI	GCAGC	6 cut(s)	29, 927, 1066, 1762, 1972, 2000
BseYI	CCCAGC	1 cut(s)	1212
BsgI	GTGCAG	1 cut(s)	715
Bsh1236I	CGCG	3 cut(s)	425, 433, 497
BshFI	GGCC	3 cut(s)	1451, 1789, 1892
BshNI	GGYRCC	1 cut(s)	556
BsiHKAI	GWGCWC	1 cut(s)	2181
BsiSI	CCGG	1 cut(s)	2069
BslFI	GGGAC	1 cut(s)	2082
BslI	CCNNNNNNNGG	3 cut(s)	1030, 1804, 2005
BsmAI	GTCTC	2 cut(s)	199, 658
BsmBI	CGTCTC	1 cut(s)	658
BsmFI	GGGAC	1 cut(s)	2082
BsmI	GAATGC	1 cut(s)	1320
BsnI	GGCC	3 cut(s)	1451, 1789, 1892
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	2 cut(s)	431, 2181
Bsp143I	GATC	5 cut(s)	100, 224, 882, 1171, 2213
Bsp68I	TCGCGA	1 cut(s)	497
BspACI	CCGC	7 cut(s)	9, 423, 431, 563, 1595, 2051, 2211
BspANI	GGCC	3 cut(s)	1451, 1789, 1892
BspCNI	CTCAG	5 cut(s)	318, 454, 1127, 1869, 2247
BspFNI	CGCG	3 cut(s)	425, 433, 497
BspLI	GGNNCC	3 cut(s)	558, 1450, 1908
BspMAI	CTGCAG	2 cut(s)	1990, 2084
BspMI	ACCTGC	3 cut(s)	446, 806, 2125
BspPI	GGATC	2 cut(s)	95, 2221
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	1 cut(s)	556
BspTI	CTTAAG	2 cut(s)	1292, 1355
BsrI	ACTGG	5 cut(s)	43, 898, 1052, 1375, 1733
BssECI	CCNNGG	9 cut(s)	480, 567, 596, 928, 1023, 1452, 1605, 1679, 1826
BssMI	GATC	5 cut(s)	100, 224, 882, 1171, 2213
BssT1I	CCWWGG	6 cut(s)	480, 567, 596, 928, 1452, 1605
Bst2UI	CCWGG	3 cut(s)	546, 1025, 1680
Bst4CI	ACNGT	2 cut(s)	335, 689
Bst6I	CTCTTC	2 cut(s)	540, 839
BstAFI	CTTAAG	2 cut(s)	1292, 1355
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	3 cut(s)	427, 431, 1494
BstDEI	CTNAG	7 cut(s)	51, 221, 305, 462, 1114, 1877, 2234
BstEII	GGTNACC	1 cut(s)	818
BstENI	CCTNNNNNAGG	1 cut(s)	1802
BstF5I	GGATG	4 cut(s)	362, 1033, 1366, 1738
BstFNI	CGCG	3 cut(s)	425, 433, 497
BstHHI	GCGC	3 cut(s)	304, 435, 2128
BstKTI	GATC	5 cut(s)	103, 227, 885, 1174, 2216
BstMAI	GTCTC	2 cut(s)	199, 658
BstMBI	GATC	5 cut(s)	100, 224, 882, 1171, 2213
BstMWI	GCNNNNNNNGC	2 cut(s)	1514, 1662
BstNI	CCWGG	3 cut(s)	546, 1025, 1680
BstNSI	RCATGY	2 cut(s)	1660, 2126
BstPAI	GACNNNNGTC	1 cut(s)	2094
BstPI	GGTNACC	1 cut(s)	818
BstSCI	CCNGG	3 cut(s)	544, 1023, 1678
BstSFI	CTRYAG	2 cut(s)	1986, 2080
BstUI	CGCG	3 cut(s)	425, 433, 497
BstV1I	GCAGC	6 cut(s)	29, 927, 1066, 1762, 1972, 2000
BstV2I	GAAGAC	2 cut(s)	764, 2231
BstX2I	RGATCY	1 cut(s)	1171
BstYI	RGATCY	1 cut(s)	1171
BsuRI	GGCC	3 cut(s)	1451, 1789, 1892
BtrI	CACGTC	1 cut(s)	1670
BtsCI	GGATG	4 cut(s)	362, 1033, 1366, 1738
BtsIMutI	CAGTG	1 cut(s)	340
BtuMI	TCGCGA	1 cut(s)	497
BveI	ACCTGC	3 cut(s)	446, 806, 2125
Cac8I	GCNNGC	3 cut(s)	427, 431, 1494
CaiI	CAGNNNCTG	1 cut(s)	461
CfoI	GCGC	3 cut(s)	304, 435, 2128
Cfr13I	GGNCC	3 cut(s)	266, 449, 1449
CseI	GACGC	1 cut(s)	1256
Csp6I	GTAC	7 cut(s)	647, 1585, 1743, 1769, 2066, 2077, 2085
CviAII	CATG	9 cut(s)	602, 620, 944, 1018, 1657, 1688, 1720, 2123, 2129
CviQI	GTAC	7 cut(s)	647, 1585, 1743, 1769, 2066, 2077, 2085
DdeI	CTNAG	7 cut(s)	51, 221, 305, 462, 1114, 1877, 2234
DpnI	GATC	5 cut(s)	102, 226, 884, 1173, 2215
DpnII	GATC	5 cut(s)	100, 224, 882, 1171, 2213
DraI	TTTAAA	1 cut(s)	148
DrdI	GACNNNNNNGTC	1 cut(s)	132
DseDI	GACNNNNNNGTC	1 cut(s)	132
EaeI	YGGCCR	1 cut(s)	1890
Eam1104I	CTCTTC	2 cut(s)	540, 839
EarI	CTCTTC	2 cut(s)	540, 839
EciI	GGCGGA	2 cut(s)	2066, 2226
Ecl136II	GAGCTC	1 cut(s)	2179
Eco130I	CCWWGG	6 cut(s)	480, 567, 596, 928, 1452, 1605
Eco147I	AGGCCT	1 cut(s)	1789
Eco24I	GRGCYC	2 cut(s)	431, 2181
Eco32I	GATATC	1 cut(s)	117
Eco47I	GGWCC	2 cut(s)	266, 449
Eco53kI	GAGCTC	1 cut(s)	2179
Eco57I	CTGAAG	2 cut(s)	1533, 1542
Eco91I	GGTNACC	1 cut(s)	818
EcoICRI	GAGCTC	1 cut(s)	2179
EcoNI	CCTNNNNNAGG	1 cut(s)	1802
EcoO109I	RGGNCCY	1 cut(s)	1449
EcoO65I	GGTNACC	1 cut(s)	818
EcoRI	GAATTC	1 cut(s)	168
EcoRII	CCWGG	3 cut(s)	544, 1023, 1678
EcoRV	GATATC	1 cut(s)	117
EcoT14I	CCWWGG	6 cut(s)	480, 567, 596, 928, 1452, 1605
EcoT22I	ATGCAT	2 cut(s)	832, 1239
EcoT38I	GRGCYC	2 cut(s)	431, 2181
ErhI	CCWWGG	6 cut(s)	480, 567, 596, 928, 1452, 1605
Esp3I	CGTCTC	1 cut(s)	658
FaeI	CATG	9 cut(s)	605, 623, 947, 1021, 1660, 1691, 1723, 2126, 2132
FalI	AAGNNNNNCTT	6 cut(s)	760, 792, 1540, 1572, 2029, 2061
FaqI	GGGAC	1 cut(s)	2082
FatI	CATG	9 cut(s)	601, 619, 943, 1017, 1656, 1687, 1719, 2122, 2128
FauI	CCCGC	1 cut(s)	438
FauNDI	CATATG	2 cut(s)	232, 271
FblI	GTMKAC	2 cut(s)	136, 2162
Fnu4HI	GCNGC	6 cut(s)	43, 941, 1055, 1776, 1986, 1989
FokI	GGATG	4 cut(s)	349, 1040, 1373, 1745
FriOI	GRGCYC	2 cut(s)	431, 2181
Fsp4HI	GCNGC	6 cut(s)	43, 941, 1055, 1776, 1986, 1989
FspAI	RTGCGCAY	1 cut(s)	2127
FspBI	CTAG	7 cut(s)	18, 123, 245, 513, 1175, 1611, 1626
FspI	TGCGCA	1 cut(s)	2127
GlaI	GCGC	3 cut(s)	303, 434, 2127
GluI	GCNGC	6 cut(s)	43, 941, 1055, 1776, 1986, 1989
GsaI	CCCAGC	1 cut(s)	1216
GsuI	CTGGAG	1 cut(s)	690
HaeIII	GGCC	3 cut(s)	1451, 1789, 1892
HapII	CCGG	1 cut(s)	2069
HgaI	GACGC	1 cut(s)	1256
HhaI	GCGC	3 cut(s)	304, 435, 2128
Hin1II	CATG	9 cut(s)	605, 623, 947, 1021, 1660, 1691, 1723, 2126, 2132
Hin6I	GCGC	3 cut(s)	302, 433, 2126
HinP1I	GCGC	3 cut(s)	302, 433, 2126
HincII	GTYRAC	6 cut(s)	61, 137, 1485, 1651, 1726, 2163
HindII	GTYRAC	6 cut(s)	61, 137, 1485, 1651, 1726, 2163
HindIII	AAGCTT	1 cut(s)	851
HinfI	GANTC	6 cut(s)	282, 530, 572, 578, 1972, 2159
HpaI	GTTAAC	1 cut(s)	1726
HpaII	CCGG	1 cut(s)	2069
HphI	GGTGA	5 cut(s)	686, 713, 1217, 1852, 1985
Hpy166II	GTNNAC	7 cut(s)	61, 137, 1485, 1651, 1726, 1843, 2163
Hpy8I	GTNNAC	7 cut(s)	61, 137, 1485, 1651, 1726, 1843, 2163
Hpy99I	CGWCG	1 cut(s)	138
HpyAV	CCTTC	4 cut(s)	343, 1459, 1568, 2201
HpyCH4III	ACNGT	2 cut(s)	335, 689
HpyCH4IV	ACGT	9 cut(s)	133, 175, 1066, 1536, 1587, 1669, 1759, 1914, 2228
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1514, 1662
HpyF3I	CTNAG	7 cut(s)	51, 221, 305, 462, 1114, 1877, 2234
HpySE526I	ACGT	9 cut(s)	133, 175, 1066, 1536, 1587, 1669, 1759, 1914, 2228
Hsp92II	CATG	9 cut(s)	605, 623, 947, 1021, 1660, 1691, 1723, 2126, 2132
HspAI	GCGC	3 cut(s)	302, 433, 2126
KspAI	GTTAAC	1 cut(s)	1726
Kzo9I	GATC	5 cut(s)	100, 224, 882, 1171, 2213
LmnI	GCTCC	2 cut(s)	951, 2184
Lsp1109I	GCAGC	6 cut(s)	29, 927, 1066, 1762, 1972, 2000
LweI	GCATC	2 cut(s)	371, 1843
MaeI	CTAG	7 cut(s)	18, 123, 245, 513, 1175, 1611, 1626
MaeII	ACGT	9 cut(s)	133, 175, 1066, 1536, 1587, 1669, 1759, 1914, 2228
MaeIII	GTNAC	7 cut(s)	818, 1012, 1102, 1223, 1366, 1429, 1961
MalI	GATC	5 cut(s)	102, 226, 884, 1173, 2215
MboI	GATC	5 cut(s)	100, 224, 882, 1171, 2213
MboII	GAAGA	8 cut(s)	6, 80, 527, 764, 856, 1910, 2116, 2236
MflI	RGATCY	1 cut(s)	1171
MhlI	GDGCHC	2 cut(s)	431, 2181
MlsI	TGGCCA	1 cut(s)	1892
MluCI	AATT	8 cut(s)	94, 168, 295, 376, 522, 1379, 1617, 2010
MluNI	TGGCCA	1 cut(s)	1892
MlyI	GAGTC	2 cut(s)	276, 2168
MmeI	TCCRAC	2 cut(s)	259, 882
Mox20I	TGGCCA	1 cut(s)	1892
Mph1103I	ATGCAT	2 cut(s)	832, 1239
MroXI	GAANNNNTTC	1 cut(s)	207
MscI	TGGCCA	1 cut(s)	1892
MslI	CAYNNNNRTG	3 cut(s)	507, 606, 2127
Msp20I	TGGCCA	1 cut(s)	1892
MspCI	CTTAAG	2 cut(s)	1292, 1355
MspI	CCGG	1 cut(s)	2069
MspR9I	CCNGG	3 cut(s)	546, 1025, 1680
Mva1269I	GAATGC	1 cut(s)	1320
MvaI	CCWGG	3 cut(s)	546, 1025, 1680
MvnI	CGCG	3 cut(s)	425, 433, 497
MwoI	GCNNNNNNNGC	2 cut(s)	1514, 1662
NdeI	CATATG	2 cut(s)	232, 271
NdeII	GATC	5 cut(s)	100, 224, 882, 1171, 2213
NlaIII	CATG	9 cut(s)	605, 623, 947, 1021, 1660, 1691, 1723, 2126, 2132
NlaIV	GGNNCC	3 cut(s)	558, 1450, 1908
NmuCI	GTSAC	3 cut(s)	1012, 1223, 1961
NruI	TCGCGA	1 cut(s)	497
NsbI	TGCGCA	1 cut(s)	2127
NsiI	ATGCAT	2 cut(s)	832, 1239
NspI	RCATGY	2 cut(s)	1660, 2126
NspV	TTCGAA	1 cut(s)	201
PaqCI	CACCTGC	1 cut(s)	2125
PceI	AGGCCT	1 cut(s)	1789
PcsI	WCGNNNNNNNCGW	1 cut(s)	133
PctI	GAATGC	1 cut(s)	1320
PdmI	GAANNNNTTC	1 cut(s)	207
PfeI	GAWTC	4 cut(s)	530, 572, 578, 1972
PflFI	GACNNNGTC	1 cut(s)	132
PkrI	GCNGC	6 cut(s)	44, 942, 1056, 1777, 1987, 1990
PleI	GAGTC	2 cut(s)	276, 2167
PpsI	GAGTC	2 cut(s)	276, 2167
PshAI	GACNNNNGTC	1 cut(s)	2094
Psp124BI	GAGCTC	1 cut(s)	2181
Psp6I	CCWGG	3 cut(s)	544, 1023, 1678
PspEI	GGTNACC	1 cut(s)	818
PspFI	CCCAGC	1 cut(s)	1212
PspGI	CCWGG	3 cut(s)	544, 1023, 1678
PspN4I	GGNNCC	3 cut(s)	558, 1450, 1908
PspPI	GGNCC	3 cut(s)	266, 449, 1449
PstI	CTGCAG	2 cut(s)	1990, 2084
PstNI	CAGNNNCTG	1 cut(s)	461
PsuI	RGATCY	1 cut(s)	1171
PsyI	GACNNNGTC	1 cut(s)	132
RruI	TCGCGA	1 cut(s)	497
RsaI	GTAC	7 cut(s)	648, 1586, 1744, 1770, 2067, 2078, 2086
RsaNI	GTAC	7 cut(s)	647, 1585, 1743, 1769, 2066, 2077, 2085
RseI	CAYNNNNRTG	3 cut(s)	507, 606, 2127
SacI	GAGCTC	1 cut(s)	2181
SalI	GTCGAC	2 cut(s)	135, 2161
SatI	GCNGC	6 cut(s)	43, 941, 1055, 1776, 1986, 1989
Sau3AI	GATC	5 cut(s)	100, 224, 882, 1171, 2213
Sau96I	GGNCC	3 cut(s)	266, 449, 1449
SchI	GAGTC	2 cut(s)	276, 2168
ScrFI	CCNGG	3 cut(s)	546, 1025, 1680
SduI	GDGCHC	2 cut(s)	431, 2181
SfaNI	GCATC	2 cut(s)	371, 1843
SfcI	CTRYAG	2 cut(s)	1986, 2080
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	2 cut(s)	266, 449
SmiMI	CAYNNNNRTG	3 cut(s)	507, 606, 2127
SmlI	CTYRAG	4 cut(s)	641, 710, 1292, 1355
SmoI	CTYRAG	4 cut(s)	641, 710, 1292, 1355
Sse9I	AATT	8 cut(s)	94, 168, 295, 376, 522, 1379, 1617, 2010
SseBI	AGGCCT	1 cut(s)	1789
SsiI	CCGC	7 cut(s)	9, 423, 431, 563, 1595, 2051, 2211
SspI	AATATT	2 cut(s)	404, 1099
SspMI	CTAG	7 cut(s)	18, 123, 245, 513, 1175, 1611, 1626
SstI	GAGCTC	1 cut(s)	2181
StuI	AGGCCT	1 cut(s)	1789
StyD4I	CCNGG	3 cut(s)	544, 1023, 1678
StyI	CCWWGG	6 cut(s)	480, 567, 596, 928, 1452, 1605
TaaI	ACNGT	2 cut(s)	335, 689
TaiI	ACGT	9 cut(s)	136, 178, 1069, 1539, 1590, 1672, 1762, 1917, 2231
TaqI	TCGA	3 cut(s)	136, 201, 2162
TasI	AATT	8 cut(s)	94, 168, 295, 376, 522, 1379, 1617, 2010
TatI	WGTACW	1 cut(s)	2076
TfiI	GAWTC	4 cut(s)	530, 572, 578, 1972
TscAI	CASTG	1 cut(s)	340
TseFI	GTSAC	3 cut(s)	1012, 1223, 1961
TseI	GCWGC	6 cut(s)	42, 940, 1054, 1775, 1985, 1988
Tsp45I	GTSAC	3 cut(s)	1012, 1223, 1961
TspDTI	ATGAA	7 cut(s)	314, 399, 618, 989, 1392, 1708, 1721
TspRI	CASTG	1 cut(s)	340
Tth111I	GACNNNGTC	1 cut(s)	132
Vha464I	CTTAAG	2 cut(s)	1292, 1355
VpaK11BI	GGWCC	2 cut(s)	266, 449
XagI	CCTNNNNNAGG	1 cut(s)	1802
XapI	RAATTY	5 cut(s)	168, 295, 376, 1379, 2010
XceI	RCATGY	2 cut(s)	1660, 2126
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1900
XmiI	GTMKAC	2 cut(s)	136, 2162
XmnI	GAANNNNTTC	1 cut(s)	207
XspI	CTAG	7 cut(s)	18, 123, 245, 513, 1175, 1611, 1626
Zsp2I	ATGCAT	2 cut(s)	832, 1239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.