Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012397

Orthogroup ID

OG0006040

Physical Location & Seq

Genomic Coordinates Reverse (-)

125176 .. 126603

Gene Structure 1428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGACTATGAAACCAAAGATACTGATATTTTGGCAGCATTTCGAGTAACTCCTCAACCTGGAGTTCCACCTGAGGAAGCAGGGGCCGCGGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTATGGACTGACGGTCTTACCAGTCTTGATCGTTACAAAGGTCGATGCTACCACATCGAGCCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTACCCCTTAGACCTTTTTGAAGAAGGTTCTGTTACTAACATGTTTACTTCCATTGTAGGTAATGTGTTTGGGTTCAAGGCCCTGCGCGCTCTACGTCTGGAGGATTTGCGAATCCCTACTGCTTATGTTAAAACTTTCCAGGGCCCGCCTCATGGTATCCAAGTTGAGAGAGATAAATTGAACAAGTATGGCCGCCCTCTATTGGGATGTACTATAAAACCAAAATTGGGGTTATCCGCTAAGAATTACGGTAGAGCAGTTTATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAGAATGTTAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCTTATTTTGTGCCGAAGCAATTTATAAAGCACAGGCTGAAACAGGTGAAATTAAAGGGCATTACTTAAACGCTACTGCAGGTACAGTAGAAGATATGATGAAAAGAGCTGTATTTGCCAGAGAATTGGGGGTTCCAATCGTAATGCATGATTACTTAACAGGGGGATTCACTGCAAATACTACCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATCCACCGTGCAATGCATGCAGTTATCGATAGACAGAAGAATCATGGTATGCACTTTCGTGTACTAGCTAAAGCGTTACGTATGTCTGGTGGAGATCATATACACGCTGGTACCGTAGTAGGTAAACTTGAGGGGGAAAGAGAGATTACTTTAGGCTTTGTTGATTTACTACGTGATGATTTTATTGAAAAAGATCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTCTCTCTGCCAGGTGTTTTGCCTGTGGCTTCAGGGGGTATTCACGTTTGGCATATGCCTGCTCTGACCGAGATCTTTGGAGATGATTCTGTACTACAATTTGGTGGCGGAACTTTAGGACACCCTTGGGGAAATGCACCTGGTGCCGTAGCTAATCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATTCGTGAGGCTAGTAAATGGAGTCCGGAACTAGCTGCTGCTTGTGAAGTATGGAAGGAGATCAAATTCGAATTCGAAGCAATGGATACTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00061 ko00620 ko00630 ko00640 ko00710 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01212 map00061 map00620 map00630 map00640 map00710 map00720 map01100 map01110 map01120 map01130 map01200 map01212

Pfam Domains

Protein Families

RuBisCO_large RuBisCO_large_N

Protein Analysis

476

Amino Acids

52.67

Weight (kDa)

6.04

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuBisCO_large_N	PF02788	24 - 144	3.7e-43	Ribulose bisphosphate carboxylase large chain, N-terminal domain
RuBisCO_large	PF00016	154 - 462	2.3e-138	Ribulose bisphosphate carboxylase large chain, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00490
malus_domestica	MD02G1049600.v1.1 MD11G1294900.v1.1 MD11G1295000.v1.1
prunus_persica	Prupe.7G029600_v2.0.a1
pyrus_communis	pycom08g13270 pycom12397g00250
rosa_chinensis	RchiOBHm_Chr5g0043011 RchiOBHm_CPg0502111
rosa_laevigata	RLG00000000069 RLG00000000106 RLG00000000163 RLG00000000221 RLG00000000257 RLG00000000267 RLG00000000290 RLG00000000329 RLG00000000350 RLG00000037105
rosa_roxburghii	Rroxscaffold_2G00087120 Rroxscaffold_3G00220720
rosa_rugosa	RorugMtG0002400.1
rosa_samantha	Rh2AG282300 Rh2BG293600 Rh2DG288500 Rh5BG295000 Rh5DG304800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	60, 678
Acc36I	ACCTGC	1 cut(s)	722
Acc65I	GGTACC	1 cut(s)	986
AccB1I	GGYRCC	2 cut(s)	986, 1247
AccI	GTMKAC	2 cut(s)	577, 865
AccII	CGCG	4 cut(s)	167, 393, 582, 1080
AccIII	TCCGGA	1 cut(s)	1357
AciI	CCGC	9 cut(s)	165, 167, 452, 499, 543, 582, 1078, 1080, 1212
AcoI	YGGCCR	1 cut(s)	496
AcsI	RAATTY	2 cut(s)	1397, 1403
AcuI	CTGAAG	1 cut(s)	1119
AdeI	CACNNNGTG	1 cut(s)	1247
AfaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
AfiI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 508, 509, 533
AflIII	ACRYGT	1 cut(s)	345
AgsI	TTSAA	5 cut(s)	40, 326, 382, 487, 1064
AhdI	GACNNNNNGTC	1 cut(s)	216
AjiI	CACGTC	1 cut(s)	1304
AjnI	CCWGG	4 cut(s)	136, 444, 1114, 1243
AleI	CACNNNNGTG	1 cut(s)	933
AluBI	AGCT	9 cut(s)	44, 173, 305, 761, 944, 1256, 1268, 1289, 1367
AluI	AGCT	9 cut(s)	44, 173, 305, 761, 944, 1256, 1268, 1289, 1367
Alw26I	GTCTC	3 cut(s)	11, 639, 1111
Aor13HI	TCCGGA	1 cut(s)	1357
AoxI	GGCC	4 cut(s)	162, 384, 448, 496
ApaI	GGGCCC	1 cut(s)	452
ApeKI	GCWGC	4 cut(s)	113, 173, 1367, 1370
ApoI	RAATTY	2 cut(s)	1397, 1403
Asp700I	GAANNNNTTC	1 cut(s)	1332
Asp718I	GGTACC	1 cut(s)	986
AspLEI	GCGC	2 cut(s)	393, 395
AspS9I	GGNCC	4 cut(s)	162, 385, 448, 449
AsuHPI	GGTGA	1 cut(s)	710
AsuII	TTCGAA	2 cut(s)	1401, 1407
AxyI	CCTNAGG	1 cut(s)	150
BaeGI	GKGCMC	1 cut(s)	452
BaeI	ACNNNNGTAYC	4 cut(s)	970, 978, 1003, 1011
BanI	GGYRCC	2 cut(s)	986, 1247
BanII	GRGCYC	1 cut(s)	452
BarI	GAAGNNNNNNTAC	2 cut(s)	1266, 1298
BauI	CACGAG	1 cut(s)	1314
BbvI	GCAGC	4 cut(s)	125, 160, 1354, 1357
BceAI	ACGGC	1 cut(s)	1235
BcgI	CGANNNNNNTGC	2 cut(s)	251, 285
BciT130I	CCWGG	4 cut(s)	138, 446, 1116, 1245
BciVI	GTATCC	2 cut(s)	473, 1411
BcoDI	GTCTC	3 cut(s)	11, 639, 1111
BfaI	CTAG	4 cut(s)	941, 1271, 1344, 1364
BfmI	CTRYAG	1 cut(s)	729
BfuAI	ACCTGC	1 cut(s)	722
BfuI	GTATCC	2 cut(s)	473, 1411
BglII	AGATCT	1 cut(s)	1176
BisI	GCNGC	7 cut(s)	114, 165, 174, 499, 1078, 1368, 1371
BlsI	GCNGC	7 cut(s)	115, 166, 175, 500, 1079, 1369, 1372
Bme1390I	CCNGG	4 cut(s)	138, 446, 1116, 1245
BmeRI	GACNNNNNGTC	1 cut(s)	216
BmgBI	CACGTC	1 cut(s)	1304
BmgT120I	GGNCC	4 cut(s)	162, 385, 448, 449
BmiI	GGNNCC	5 cut(s)	163, 450, 786, 988, 1249
BmrFI	CCNGG	4 cut(s)	138, 446, 1116, 1245
BmsI	GCATC	1 cut(s)	239
BpmI	CTGGAG	3 cut(s)	159, 294, 425
Bpu14I	TTCGAA	2 cut(s)	1401, 1407
BpuEI	CTTGAG	2 cut(s)	1025, 1080
Bsa29I	ATCGAT	1 cut(s)	903
BsaAI	YACGTR	2 cut(s)	956, 1049
BsaI	GGTCTC	2 cut(s)	639, 1111
BsaJI	CCNNGG	5 cut(s)	165, 445, 837, 1078, 1229
BsaWI	WCCGGW	1 cut(s)	1357
BsaXI	ACNNNNNCTCC	2 cut(s)	634, 664
Bsc4I	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 508, 509, 533
Bse1I	ACTGG	2 cut(s)	193, 225
Bse21I	CCTNAGG	1 cut(s)	150
Bse3DI	GCAATG	2 cut(s)	894, 1419
BseAI	TCCGGA	1 cut(s)	1357
BseBI	CCWGG	4 cut(s)	138, 446, 1116, 1245
BseCI	ATCGAT	1 cut(s)	903
BseDI	CCNNGG	5 cut(s)	165, 445, 837, 1078, 1229
BseGI	GGATG	2 cut(s)	518, 876
BseLI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 508, 509, 533
BseMI	GCAATG	2 cut(s)	894, 1419
BseMII	CTCAG	1 cut(s)	141
BseNI	ACTGG	2 cut(s)	193, 225
BsePI	GCGCGC	1 cut(s)	391
BseRI	GAGGAG	1 cut(s)	120
BseSI	GKGCMC	1 cut(s)	452
BseXI	GCAGC	4 cut(s)	125, 160, 1354, 1357
Bsh1236I	CGCG	4 cut(s)	167, 393, 582, 1080
BshFI	GGCC	4 cut(s)	164, 386, 450, 498
BshNI	GGYRCC	2 cut(s)	986, 1247
BshVI	ATCGAT	1 cut(s)	903
BsiSI	CCGG	1 cut(s)	1358
BslFI	GGGAC	1 cut(s)	1314
BslI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 508, 509, 533
BsmAI	GTCTC	3 cut(s)	11, 639, 1111
BsmFI	GGGAC	1 cut(s)	1314
BsnI	GGCC	4 cut(s)	164, 386, 450, 498
Bso31I	GGTCTC	2 cut(s)	639, 1111
Bsp119I	TTCGAA	2 cut(s)	1401, 1407
Bsp120I	GGGCCC	1 cut(s)	448
Bsp1286I	GDGCHC	1 cut(s)	452
Bsp13I	TCCGGA	1 cut(s)	1357
Bsp1407I	TGTACA	1 cut(s)	1282
Bsp143I	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
BspACI	CCGC	9 cut(s)	165, 167, 452, 499, 543, 582, 1078, 1080, 1212
BspANI	GGCC	4 cut(s)	164, 386, 450, 498
BspCNI	CTCAG	1 cut(s)	142
BspDI	ATCGAT	1 cut(s)	903
BspEI	TCCGGA	1 cut(s)	1357
BspFNI	CGCG	4 cut(s)	167, 393, 582, 1080
BspLI	GGNNCC	5 cut(s)	163, 450, 786, 988, 1249
BspMAI	CTGCAG	1 cut(s)	733
BspMI	ACCTGC	1 cut(s)	722
BspT104I	TTCGAA	2 cut(s)	1401, 1407
BspT107I	GGYRCC	2 cut(s)	986, 1247
BspTNI	GGTCTC	2 cut(s)	639, 1111
BsrDI	GCAATG	2 cut(s)	894, 1419
BsrGI	TGTACA	1 cut(s)	1282
BsrI	ACTGG	2 cut(s)	193, 225
BssECI	CCNNGG	5 cut(s)	165, 445, 837, 1078, 1229
BssHII	GCGCGC	1 cut(s)	391
BssMI	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
BssSI	CACGAG	1 cut(s)	1314
BssT1I	CCWWGG	2 cut(s)	837, 1229
Bst2BI	CACGAG	1 cut(s)	1314
Bst2UI	CCWGG	4 cut(s)	138, 446, 1116, 1245
Bst4CI	ACNGT	7 cut(s)	205, 218, 557, 650, 739, 884, 991
BstAPI	GCANNNNNTGC	2 cut(s)	893, 1247
BstAUI	TGTACA	1 cut(s)	1282
BstBAI	YACGTR	2 cut(s)	956, 1049
BstBI	TTCGAA	2 cut(s)	1401, 1407
BstC8I	GCNNGC	4 cut(s)	393, 452, 894, 1164
BstDEI	CTNAG	3 cut(s)	150, 313, 546
BstDSI	CCRYGG	2 cut(s)	165, 1078
BstF5I	GGATG	2 cut(s)	518, 876
BstFNI	CGCG	4 cut(s)	167, 393, 582, 1080
BstHHI	GCGC	2 cut(s)	393, 395
BstKTI	GATC	6 cut(s)	235, 973, 1072, 1179, 1309, 1395
BstMAI	GTCTC	3 cut(s)	11, 639, 1111
BstMBI	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
BstNI	CCWGG	4 cut(s)	138, 446, 1116, 1245
BstNSI	RCATGY	3 cut(s)	349, 896, 1281
BstSCI	CCNGG	4 cut(s)	136, 444, 1114, 1243
BstSFI	CTRYAG	1 cut(s)	729
BstSLI	GKGCMC	1 cut(s)	452
BstSNI	TACGTA	1 cut(s)	956
BstUI	CGCG	4 cut(s)	167, 393, 582, 1080
BstV1I	GCAGC	4 cut(s)	125, 160, 1354, 1357
BstX2I	RGATCY	1 cut(s)	1176
BstXI	CCANNNNNNTGG	1 cut(s)	778
BstYI	RGATCY	1 cut(s)	1176
Bsu15I	ATCGAT	1 cut(s)	903
Bsu36I	CCTNAGG	1 cut(s)	150
BsuI	GTATCC	2 cut(s)	473, 1411
BsuRI	GGCC	4 cut(s)	164, 386, 450, 498
BsuTUI	ATCGAT	1 cut(s)	903
BtgI	CCRYGG	2 cut(s)	165, 1078
BtrI	CACGTC	1 cut(s)	1304
BtsCI	GGATG	2 cut(s)	518, 876
BtsI	GCAGTG	1 cut(s)	822
BtsIMutI	CAGTG	1 cut(s)	822
BveI	ACCTGC	1 cut(s)	722
Cac8I	GCNNGC	4 cut(s)	393, 452, 894, 1164
CfoI	GCGC	2 cut(s)	393, 395
Cfr13I	GGNCC	4 cut(s)	162, 385, 448, 449
Cfr42I	CCGCGG	2 cut(s)	168, 1081
ClaI	ATCGAT	1 cut(s)	903
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
CviAII	CATG	7 cut(s)	195, 346, 458, 800, 893, 920, 1278
CviQI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
DdeI	CTNAG	3 cut(s)	150, 313, 546
DpnI	GATC	6 cut(s)	234, 972, 1071, 1178, 1308, 1394
DpnII	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
DraIII	CACNNNGTG	1 cut(s)	1247
DriI	GACNNNNNGTC	1 cut(s)	216
EaeI	YGGCCR	1 cut(s)	496
Eam1105I	GACNNNNNGTC	1 cut(s)	216
EciI	GGCGGA	1 cut(s)	1227
Eco105I	TACGTA	1 cut(s)	956
Eco130I	CCWWGG	2 cut(s)	837, 1229
Eco24I	GRGCYC	1 cut(s)	452
Eco31I	GGTCTC	2 cut(s)	639, 1111
Eco57I	CTGAAG	1 cut(s)	1119
Eco81I	CCTNAGG	1 cut(s)	150
EcoO109I	RGGNCCY	2 cut(s)	385, 448
EcoRI	GAATTC	1 cut(s)	1403
EcoRII	CCWGG	4 cut(s)	136, 444, 1114, 1243
EcoT14I	CCWWGG	2 cut(s)	837, 1229
EcoT22I	ATGCAT	2 cut(s)	801, 894
EcoT38I	GRGCYC	1 cut(s)	452
ErhI	CCWWGG	2 cut(s)	837, 1229
FaeI	CATG	7 cut(s)	198, 349, 461, 803, 896, 923, 1281
FaqI	GGGAC	1 cut(s)	1314
FatI	CATG	7 cut(s)	194, 345, 457, 799, 892, 919, 1277
FauI	CCCGC	1 cut(s)	459
FauNDI	CATATG	1 cut(s)	1158
FblI	GTMKAC	2 cut(s)	577, 865
Fnu4HI	GCNGC	7 cut(s)	114, 165, 174, 499, 1078, 1368, 1371
FokI	GGATG	2 cut(s)	525, 863
FriOI	GRGCYC	1 cut(s)	452
Fsp4HI	GCNGC	7 cut(s)	114, 165, 174, 499, 1078, 1368, 1371
FspBI	CTAG	4 cut(s)	941, 1271, 1344, 1364
GlaI	GCGC	2 cut(s)	392, 394
GluI	GCNGC	7 cut(s)	114, 165, 174, 499, 1078, 1368, 1371
GsuI	CTGGAG	3 cut(s)	159, 294, 425
HaeIII	GGCC	4 cut(s)	164, 386, 450, 498
HapII	CCGG	1 cut(s)	1358
HhaI	GCGC	2 cut(s)	393, 395
Hin1II	CATG	7 cut(s)	198, 349, 461, 803, 896, 923, 1281
Hin6I	GCGC	2 cut(s)	391, 393
HinP1I	GCGC	2 cut(s)	391, 393
HinfI	GANTC	7 cut(s)	36, 179, 417, 819, 916, 1190, 1354
HpaII	CCGG	1 cut(s)	1358
HphI	GGTGA	1 cut(s)	710
Hpy166II	GTNNAC	7 cut(s)	351, 578, 587, 866, 938, 1001, 1283
Hpy188I	TCNGA	1 cut(s)	1170
Hpy188III	TCNNGA	8 cut(s)	80, 230, 404, 1097, 1271, 1316, 1337, 1358
Hpy8I	GTNNAC	7 cut(s)	351, 578, 587, 866, 938, 1001, 1283
HpyAV	CCTTC	2 cut(s)	323, 1381
HpyCH4III	ACNGT	7 cut(s)	205, 218, 557, 650, 739, 884, 991
HpyCH4IV	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
HpyCH4V	TGCA	8 cut(s)	731, 799, 827, 887, 892, 896, 928, 1241
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
HpyF3I	CTNAG	3 cut(s)	150, 313, 546
HpySE526I	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
Hsp92II	CATG	7 cut(s)	198, 349, 461, 803, 896, 923, 1281
HspAI	GCGC	2 cut(s)	391, 393
Kpn2I	TCCGGA	1 cut(s)	1357
KpnI	GGTACC	1 cut(s)	990
KspI	CCGCGG	2 cut(s)	168, 1081
Kzo9I	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
Lsp1109I	GCAGC	4 cut(s)	125, 160, 1354, 1357
LweI	GCATC	1 cut(s)	239
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	4 cut(s)	941, 1271, 1344, 1364
MaeII	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
MaeIII	GTNAC	5 cut(s)	3, 124, 236, 337, 951
MalI	GATC	6 cut(s)	234, 972, 1071, 1178, 1308, 1394
MboI	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
MboII	GAAGA	6 cut(s)	174, 290, 338, 755, 863, 925
MflI	RGATCY	1 cut(s)	1176
MhlI	GDGCHC	1 cut(s)	452
MlyI	GAGTC	1 cut(s)	1363
MmeI	TCCRAC	2 cut(s)	13, 620
MnlI	CCTC	9 cut(s)	141, 145, 400, 465, 513, 1000, 1291, 1312, 1333
Mph1103I	ATGCAT	2 cut(s)	801, 894
MroI	TCCGGA	1 cut(s)	1357
MroXI	GAANNNNTTC	1 cut(s)	1332
MseI	TTAA	6 cut(s)	51, 435, 618, 705, 719, 809
MslI	CAYNNNNRTG	1 cut(s)	933
MspA1I	CMGCKG	2 cut(s)	167, 1080
MspI	CCGG	1 cut(s)	1358
MspR9I	CCNGG	4 cut(s)	138, 446, 1116, 1245
MvaI	CCWGG	4 cut(s)	138, 446, 1116, 1245
MvnI	CGCG	4 cut(s)	167, 393, 582, 1080
MwoI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
NdeI	CATATG	1 cut(s)	1158
NdeII	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
NlaIII	CATG	7 cut(s)	198, 349, 461, 803, 896, 923, 1281
NlaIV	GGNNCC	5 cut(s)	163, 450, 786, 988, 1249
NmeAIII	GCCGAG	1 cut(s)	878
NmuCI	GTSAC	1 cut(s)	3
NsiI	ATGCAT	2 cut(s)	801, 894
NspI	RCATGY	3 cut(s)	349, 896, 1281
NspV	TTCGAA	2 cut(s)	1401, 1407
OliI	CACNNNNGTG	1 cut(s)	933
PaeI	GCATGC	1 cut(s)	896
PauI	GCGCGC	1 cut(s)	391
PciI	ACATGT	1 cut(s)	345
PcsI	WCGNNNNNNNCGW	1 cut(s)	987
PdmI	GAANNNNTTC	1 cut(s)	1332
PfeI	GAWTC	6 cut(s)	36, 179, 417, 819, 916, 1190
PkrI	GCNGC	7 cut(s)	115, 166, 175, 500, 1079, 1369, 1372
PleI	GAGTC	1 cut(s)	1362
PpsI	GAGTC	1 cut(s)	1362
Ppu21I	YACGTR	2 cut(s)	956, 1049
PscI	ACATGT	1 cut(s)	345
PsiI	TTATAA	2 cut(s)	60, 678
Psp6I	CCWGG	4 cut(s)	136, 444, 1114, 1243
PspGI	CCWGG	4 cut(s)	136, 444, 1114, 1243
PspN4I	GGNNCC	5 cut(s)	163, 450, 786, 988, 1249
PspOMI	GGGCCC	1 cut(s)	448
PspPI	GGNCC	4 cut(s)	162, 385, 448, 449
PstI	CTGCAG	1 cut(s)	733
PsuI	RGATCY	1 cut(s)	1176
PteI	GCGCGC	1 cut(s)	391
RsaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
RsaNI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
RseI	CAYNNNNRTG	1 cut(s)	933
SacII	CCGCGG	2 cut(s)	168, 1081
SaqAI	TTAA	6 cut(s)	51, 435, 618, 705, 719, 809
SatI	GCNGC	7 cut(s)	114, 165, 174, 499, 1078, 1368, 1371
Sau3AI	GATC	6 cut(s)	232, 970, 1069, 1176, 1306, 1392
Sau96I	GGNCC	4 cut(s)	162, 385, 448, 449
SchI	GAGTC	1 cut(s)	1363
ScrFI	CCNGG	4 cut(s)	138, 446, 1116, 1245
SduI	GDGCHC	1 cut(s)	452
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	1 cut(s)	239
SfcI	CTRYAG	1 cut(s)	729
Sfr303I	CCGCGG	2 cut(s)	168, 1081
SfuI	TTCGAA	2 cut(s)	1401, 1407
SgrBI	CCGCGG	2 cut(s)	168, 1081
SmiMI	CAYNNNNRTG	1 cut(s)	933
SmlI	CTYRAG	2 cut(s)	1004, 1095
SmoI	CTYRAG	2 cut(s)	1004, 1095
SnaBI	TACGTA	1 cut(s)	956
SphI	GCATGC	1 cut(s)	896
SsiI	CCGC	9 cut(s)	165, 167, 452, 499, 543, 582, 1078, 1080, 1212
SspMI	CTAG	4 cut(s)	941, 1271, 1344, 1364
StyD4I	CCNGG	4 cut(s)	136, 444, 1114, 1243
StyI	CCWWGG	2 cut(s)	837, 1229
TaaI	ACNGT	7 cut(s)	205, 218, 557, 650, 739, 884, 991
TaiI	ACGT	5 cut(s)	403, 958, 1051, 1152, 1306
TaqI	TCGA	8 cut(s)	121, 247, 261, 903, 1072, 1261, 1401, 1407
TaqII	GACCGA	1 cut(s)	1187
TatI	WGTACW	4 cut(s)	515, 937, 1195, 1282
TauI	GCSGC	3 cut(s)	167, 501, 1080
TfiI	GAWTC	6 cut(s)	36, 179, 417, 819, 916, 1190
Tru1I	TTAA	6 cut(s)	51, 435, 618, 705, 719, 809
Tru9I	TTAA	6 cut(s)	51, 435, 618, 705, 719, 809
TscAI	CASTG	1 cut(s)	829
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	4 cut(s)	113, 173, 1367, 1370
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	4 cut(s)	102, 585, 767, 1341
TspRI	CASTG	1 cut(s)	829
XapI	RAATTY	2 cut(s)	1397, 1403
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	3 cut(s)	349, 896, 1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	636
XmiI	GTMKAC	2 cut(s)	577, 865
XmnI	GAANNNNTTC	1 cut(s)	1332
XspI	CTAG	4 cut(s)	941, 1271, 1344, 1364
Zsp2I	ATGCAT	2 cut(s)	801, 894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.