Reverse transcriptase (RNA-dependent DNA polymerase)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23121 |
| prunus_persica | Prupe.1G096300_v2.0.a1 Prupe.2G149100_v2.0.a1 |
| pyrus_communis | pycom11g21820 pycom12401g00240 |
| rosa_chinensis | RchiOBHm_Chr3g0490381 |
| rosa_laevigata | RLG00000030695 |
| rosa_multiflora | Rmu_sc0001767.1_g000001 Rmu_sc0003177.1_g000032 Rmu_sc0007121.1_g000017 |
| rosa_roxburghii | Rroxscaffold_5G00369940 |
| rosa_rugosa | Rorug07G0099500 |
| rosa_samantha | Rh2CG198100 Rh2CG348800 Rh4CG274000 Rh5AG302200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 42 |
| AjnI | CCWGG | 1 cut(s) | 217 |
| AluBI | AGCT | 4 cut(s) | 20, 31, 117, 210 |
| AluI | AGCT | 4 cut(s) | 20, 31, 117, 210 |
| Alw26I | GTCTC | 1 cut(s) | 40 |
| Aor13HI | TCCGGA | 1 cut(s) | 42 |
| AoxI | GGCC | 1 cut(s) | 170 |
| AsuNHI | GCTAGC | 1 cut(s) | 206 |
| BccI | CCATC | 1 cut(s) | 192 |
| BciT130I | CCWGG | 1 cut(s) | 219 |
| BcoDI | GTCTC | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 207 |
| Bme1390I | CCNGG | 1 cut(s) | 219 |
| BmiI | GGNNCC | 1 cut(s) | 77 |
| BmrFI | CCNGG | 1 cut(s) | 219 |
| BmrI | ACTGGG | 1 cut(s) | 83 |
| BmtI | GCTAGC | 1 cut(s) | 210 |
| BmuI | ACTGGG | 1 cut(s) | 83 |
| BsaJI | CCNNGG | 2 cut(s) | 71, 218 |
| BsaWI | WCCGGW | 1 cut(s) | 42 |
| Bse1I | ACTGG | 1 cut(s) | 89 |
| BseAI | TCCGGA | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 219 |
| BseDI | CCNNGG | 2 cut(s) | 71, 218 |
| BseNI | ACTGG | 1 cut(s) | 89 |
| BshFI | GGCC | 1 cut(s) | 172 |
| BsiSI | CCGG | 1 cut(s) | 43 |
| BslFI | GGGAC | 1 cut(s) | 180 |
| BsmAI | GTCTC | 1 cut(s) | 40 |
| BsmFI | GGGAC | 1 cut(s) | 180 |
| BsnI | GGCC | 1 cut(s) | 172 |
| Bsp13I | TCCGGA | 1 cut(s) | 42 |
| BspANI | GGCC | 1 cut(s) | 172 |
| BspEI | TCCGGA | 1 cut(s) | 42 |
| BspLI | GGNNCC | 1 cut(s) | 77 |
| BspOI | GCTAGC | 1 cut(s) | 210 |
| BsrI | ACTGG | 1 cut(s) | 89 |
| BssECI | CCNNGG | 2 cut(s) | 71, 218 |
| BssT1I | CCWWGG | 1 cut(s) | 71 |
| Bst2UI | CCWGG | 1 cut(s) | 219 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstC8I | GCNNGC | 1 cut(s) | 208 |
| BstMAI | GTCTC | 1 cut(s) | 40 |
| BstNI | CCWGG | 1 cut(s) | 219 |
| BstSCI | CCNGG | 1 cut(s) | 217 |
| BsuRI | GGCC | 1 cut(s) | 172 |
| Cac8I | GCNNGC | 1 cut(s) | 208 |
| CviAII | CATG | 1 cut(s) | 102 |
| CviJI | RGCY | 7 cut(s) | 20, 31, 117, 172, 183, 206, 210 |
| CviKI_1 | RGCY | 7 cut(s) | 20, 31, 117, 172, 183, 206, 210 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Eco130I | CCWWGG | 1 cut(s) | 71 |
| Eco147I | AGGCCT | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 217 |
| EcoT14I | CCWWGG | 1 cut(s) | 71 |
| ErhI | CCWWGG | 1 cut(s) | 71 |
| FaeI | CATG | 1 cut(s) | 105 |
| FaiI | YATR | 1 cut(s) | 103 |
| FaqI | GGGAC | 1 cut(s) | 180 |
| FatI | CATG | 1 cut(s) | 101 |
| FspBI | CTAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 1 cut(s) | 172 |
| HapII | CCGG | 1 cut(s) | 43 |
| Hin1II | CATG | 1 cut(s) | 105 |
| HinfI | GANTC | 2 cut(s) | 48, 193 |
| HpaII | CCGG | 1 cut(s) | 43 |
| Hpy166II | GTNNAC | 1 cut(s) | 133 |
| Hpy188III | TCNNGA | 1 cut(s) | 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 1 cut(s) | 105 |
| Hsp92II | CATG | 1 cut(s) | 105 |
| Kpn2I | TCCGGA | 1 cut(s) | 42 |
| LpnPI | CCDG | 6 cut(s) | 6, 56, 102, 188, 204, 231 |
| MaeI | CTAG | 1 cut(s) | 207 |
| MboII | GAAGA | 1 cut(s) | 31 |
| MluCI | AATT | 2 cut(s) | 62, 153 |
| MlyI | GAGTC | 2 cut(s) | 42, 202 |
| MroI | TCCGGA | 1 cut(s) | 42 |
| MseI | TTAA | 1 cut(s) | 167 |
| MspI | CCGG | 1 cut(s) | 43 |
| MspR9I | CCNGG | 1 cut(s) | 219 |
| MvaI | CCWGG | 1 cut(s) | 219 |
| NheI | GCTAGC | 1 cut(s) | 206 |
| NlaIII | CATG | 1 cut(s) | 105 |
| NlaIV | GGNNCC | 1 cut(s) | 77 |
| PceI | AGGCCT | 1 cut(s) | 172 |
| PleI | GAGTC | 2 cut(s) | 42, 201 |
| PpsI | GAGTC | 2 cut(s) | 42, 201 |
| Psp6I | CCWGG | 1 cut(s) | 217 |
| PspGI | CCWGG | 1 cut(s) | 217 |
| PspN4I | GGNNCC | 1 cut(s) | 77 |
| SaqAI | TTAA | 1 cut(s) | 167 |
| SchI | GAGTC | 2 cut(s) | 42, 202 |
| ScrFI | CCNGG | 1 cut(s) | 219 |
| SetI | ASST | 5 cut(s) | 22, 33, 112, 119, 212 |
| Sse9I | AATT | 2 cut(s) | 62, 153 |
| SseBI | AGGCCT | 1 cut(s) | 172 |
| SspMI | CTAG | 1 cut(s) | 207 |
| StuI | AGGCCT | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 217 |
| StyI | CCWWGG | 1 cut(s) | 71 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TasI | AATT | 2 cut(s) | 62, 153 |
| Tru1I | TTAA | 1 cut(s) | 167 |
| Tru9I | TTAA | 1 cut(s) | 167 |
| XspI | CTAG | 1 cut(s) | 207 |