ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23121 |
| prunus_persica | Prupe.1G096300_v2.0.a1 Prupe.2G149100_v2.0.a1 |
| pyrus_communis | pycom11g21820 pycom12401g00240 |
| rosa_chinensis | RchiOBHm_Chr3g0490381 |
| rosa_laevigata | RLG00000030695 |
| rosa_multiflora | Rmu_sc0001767.1_g000001 Rmu_sc0003177.1_g000032 Rmu_sc0007121.1_g000017 |
| rosa_roxburghii | Rroxscaffold_5G00369940 |
| rosa_rugosa | Rorug07G0099500 |
| rosa_samantha | Rh2CG198100 Rh2CG348800 Rh4CG274000 Rh5AG302200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 71, 103 |
| AflII | CTTAAG | 1 cut(s) | 181 |
| AgsI | TTSAA | 1 cut(s) | 120 |
| AluBI | AGCT | 1 cut(s) | 197 |
| AluI | AGCT | 1 cut(s) | 197 |
| AoxI | GGCC | 2 cut(s) | 3, 191 |
| ApeKI | GCWGC | 2 cut(s) | 197, 215 |
| ApoI | RAATTY | 2 cut(s) | 71, 103 |
| AsuHPI | GGTGA | 2 cut(s) | 57, 67 |
| BbvI | GCAGC | 2 cut(s) | 184, 202 |
| BclI | TGATCA | 1 cut(s) | 9 |
| BfaI | CTAG | 1 cut(s) | 126 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BfrI | CTTAAG | 1 cut(s) | 181 |
| BisI | GCNGC | 2 cut(s) | 198, 216 |
| BlsI | GCNGC | 2 cut(s) | 199, 217 |
| BmiI | GGNNCC | 1 cut(s) | 149 |
| BseXI | GCAGC | 2 cut(s) | 184, 202 |
| BshFI | GGCC | 2 cut(s) | 5, 193 |
| BsmI | GAATGC | 1 cut(s) | 36 |
| BsnI | GGCC | 2 cut(s) | 5, 193 |
| Bsp143I | GATC | 1 cut(s) | 9 |
| BspANI | GGCC | 2 cut(s) | 5, 193 |
| BspLI | GGNNCC | 1 cut(s) | 149 |
| BspTI | CTTAAG | 1 cut(s) | 181 |
| BssMI | GATC | 1 cut(s) | 9 |
| BstAFI | CTTAAG | 1 cut(s) | 181 |
| BstC8I | GCNNGC | 1 cut(s) | 195 |
| BstKTI | GATC | 1 cut(s) | 12 |
| BstMBI | GATC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 23 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstV1I | GCAGC | 2 cut(s) | 184, 202 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 85 |
| BsuRI | GGCC | 2 cut(s) | 5, 193 |
| BtsIMutI | CAGTG | 1 cut(s) | 246 |
| Cac8I | GCNNGC | 1 cut(s) | 195 |
| CviAII | CATG | 1 cut(s) | 41 |
| CviJI | RGCY | 6 cut(s) | 5, 170, 180, 193, 197, 233 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 170, 180, 193, 197, 233 |
| DpnI | GATC | 1 cut(s) | 11 |
| DpnII | GATC | 1 cut(s) | 9 |
| DraI | TTTAAA | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 44 |
| FaiI | YATR | 6 cut(s) | 23, 42, 47, 86, 112, 221 |
| FatI | CATG | 1 cut(s) | 40 |
| FbaI | TGATCA | 1 cut(s) | 9 |
| Fnu4HI | GCNGC | 2 cut(s) | 198, 216 |
| Fsp4HI | GCNGC | 2 cut(s) | 198, 216 |
| FspBI | CTAG | 1 cut(s) | 126 |
| GluI | GCNGC | 2 cut(s) | 198, 216 |
| HaeIII | GGCC | 2 cut(s) | 5, 193 |
| Hin1II | CATG | 1 cut(s) | 44 |
| HphI | GGTGA | 2 cut(s) | 57, 67 |
| Hpy166II | GTNNAC | 1 cut(s) | 65 |
| Hpy188III | TCNNGA | 1 cut(s) | 126 |
| Hpy8I | GTNNAC | 1 cut(s) | 65 |
| HpyCH4V | TGCA | 1 cut(s) | 159 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 23 |
| Hsp92II | CATG | 1 cut(s) | 44 |
| Ksp22I | TGATCA | 1 cut(s) | 9 |
| Kzo9I | GATC | 1 cut(s) | 9 |
| LpnPI | CCDG | 3 cut(s) | 12, 150, 207 |
| Lsp1109I | GCAGC | 2 cut(s) | 184, 202 |
| MaeI | CTAG | 1 cut(s) | 126 |
| MalI | GATC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 9 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MluCI | AATT | 4 cut(s) | 71, 103, 186, 227 |
| MseI | TTAA | 3 cut(s) | 57, 182, 207 |
| MspA1I | CMGCKG | 1 cut(s) | 197 |
| MspCI | CTTAAG | 1 cut(s) | 181 |
| Mva1269I | GAATGC | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 23 |
| NdeII | GATC | 1 cut(s) | 9 |
| NlaIII | CATG | 1 cut(s) | 44 |
| NlaIV | GGNNCC | 1 cut(s) | 149 |
| PctI | GAATGC | 1 cut(s) | 36 |
| PkrI | GCNGC | 2 cut(s) | 199, 217 |
| PspN4I | GGNNCC | 1 cut(s) | 149 |
| PvuII | CAGCTG | 1 cut(s) | 197 |
| SaqAI | TTAA | 3 cut(s) | 57, 182, 207 |
| SatI | GCNGC | 2 cut(s) | 198, 216 |
| Sau3AI | GATC | 1 cut(s) | 9 |
| SetI | ASST | 2 cut(s) | 139, 199 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| SmlI | CTYRAG | 1 cut(s) | 181 |
| SmoI | CTYRAG | 1 cut(s) | 181 |
| Sse9I | AATT | 4 cut(s) | 71, 103, 186, 227 |
| SspMI | CTAG | 1 cut(s) | 126 |
| TasI | AATT | 4 cut(s) | 71, 103, 186, 227 |
| Tru1I | TTAA | 3 cut(s) | 57, 182, 207 |
| Tru9I | TTAA | 3 cut(s) | 57, 182, 207 |
| TscAI | CASTG | 1 cut(s) | 253 |
| TseI | GCWGC | 2 cut(s) | 197, 215 |
| TspRI | CASTG | 1 cut(s) | 253 |
| Vha464I | CTTAAG | 1 cut(s) | 181 |
| XapI | RAATTY | 2 cut(s) | 71, 103 |
| XbaI | TCTAGA | 1 cut(s) | 125 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 126 |