DNA damage-inducible protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G13235 AT3G13235 AT3G13235 |
| fragaria_vesca | FvH4_3g42010 FvH4_3g42010 FvH4_3g42010 FvH4_3g42010 FvH4_3g42010 |
| malus_domestica | MD03G1039600.v1.1 MD11G1040100.v1.1 |
| prunus_persica | Prupe.6G031700_v2.0.a1 |
| pyrus_communis | pycom03g03050 pycom06g15030 pycom11g03480 pycom12g07130 |
| rosa_chinensis | RchiOBHm_Chr5g0075221 |
| rosa_laevigata | RLG00000036538 |
| rosa_roxburghii | Rroxscaffold_1G00006330 |
| rosa_rugosa | Rorug05G0437400 Rorug05G0437400 |
| rosa_samantha | Rh5AG494300 Rh5BG515700 Rh5CG539500 Rh5DG528500 |
| rosa_wichuraiana | Rw5G045870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 156 |
| AccI | GTMKAC | 2 cut(s) | 202, 478 |
| AclI | AACGTT | 1 cut(s) | 151 |
| AfaI | GTAC | 2 cut(s) | 5, 387 |
| AflIII | ACRYGT | 1 cut(s) | 205 |
| AgsI | TTSAA | 1 cut(s) | 346 |
| AluBI | AGCT | 4 cut(s) | 212, 227, 459, 467 |
| AluI | AGCT | 4 cut(s) | 212, 227, 459, 467 |
| Alw21I | GWGCWC | 1 cut(s) | 469 |
| Alw26I | GTCTC | 1 cut(s) | 17 |
| Ama87I | CYCGRG | 1 cut(s) | 482 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| AvaI | CYCGRG | 1 cut(s) | 482 |
| AxyI | CCTNAGG | 1 cut(s) | 500 |
| BanII | GRGCYC | 1 cut(s) | 469 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 369, 401 |
| BauI | CACGAG | 1 cut(s) | 14 |
| Bbv12I | GWGCWC | 1 cut(s) | 469 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BccI | CCATC | 1 cut(s) | 421 |
| BcoDI | GTCTC | 1 cut(s) | 17 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| BmeT110I | CYCGRG | 1 cut(s) | 482 |
| BmsI | GCATC | 3 cut(s) | 265, 331, 461 |
| BpmI | CTGGAG | 1 cut(s) | 109 |
| Bpu10I | CCTNAGC | 1 cut(s) | 460 |
| BsaJI | CCNNGG | 1 cut(s) | 444 |
| BsaWI | WCCGGW | 1 cut(s) | 531 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 456, 486 |
| Bse21I | CCTNAGG | 1 cut(s) | 500 |
| Bse3DI | GCAATG | 1 cut(s) | 162 |
| BseDI | CCNNGG | 1 cut(s) | 444 |
| BseGI | GGATG | 2 cut(s) | 408, 452 |
| BseMI | GCAATG | 1 cut(s) | 162 |
| BseMII | CTCAG | 2 cut(s) | 474, 491 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| BsiHKAI | GWGCWC | 1 cut(s) | 469 |
| BsiHKCI | CYCGRG | 1 cut(s) | 482 |
| BsiSI | CCGG | 1 cut(s) | 532 |
| BsmAI | GTCTC | 1 cut(s) | 17 |
| BsoBI | CYCGRG | 1 cut(s) | 482 |
| Bsp1286I | GDGCHC | 1 cut(s) | 469 |
| Bsp143I | GATC | 1 cut(s) | 145 |
| BspCNI | CTCAG | 2 cut(s) | 473, 492 |
| BsrDI | GCAATG | 1 cut(s) | 162 |
| BssECI | CCNNGG | 1 cut(s) | 444 |
| BssMI | GATC | 1 cut(s) | 145 |
| BssNAI | GTATAC | 1 cut(s) | 203 |
| BssSI | CACGAG | 1 cut(s) | 14 |
| BssT1I | CCWWGG | 1 cut(s) | 444 |
| Bst1107I | GTATAC | 1 cut(s) | 203 |
| Bst2BI | CACGAG | 1 cut(s) | 14 |
| Bst4CI | ACNGT | 1 cut(s) | 69 |
| BstDEI | CTNAG | 3 cut(s) | 96, 460, 500 |
| BstF5I | GGATG | 2 cut(s) | 408, 452 |
| BstKTI | GATC | 1 cut(s) | 148 |
| BstMAI | GTCTC | 1 cut(s) | 17 |
| BstMBI | GATC | 1 cut(s) | 145 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 319 |
| BstNSI | RCATGY | 1 cut(s) | 209 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstZ17I | GTATAC | 1 cut(s) | 203 |
| Bsu36I | CCTNAGG | 1 cut(s) | 500 |
| BtsCI | GGATG | 2 cut(s) | 408, 452 |
| BtsIMutI | CAGTG | 1 cut(s) | 65 |
| Csp6I | GTAC | 2 cut(s) | 4, 386 |
| CviAII | CATG | 3 cut(s) | 170, 206, 265 |
| CviJI | RGCY | 7 cut(s) | 56, 94, 139, 212, 227, 459, 467 |
| CviKI_1 | RGCY | 7 cut(s) | 56, 94, 139, 212, 227, 459, 467 |
| CviQI | GTAC | 2 cut(s) | 4, 386 |
| DdeI | CTNAG | 3 cut(s) | 96, 460, 500 |
| DpnI | GATC | 1 cut(s) | 147 |
| DpnII | GATC | 1 cut(s) | 145 |
| Ecl136II | GAGCTC | 1 cut(s) | 467 |
| Eco130I | CCWWGG | 1 cut(s) | 444 |
| Eco24I | GRGCYC | 1 cut(s) | 469 |
| Eco53kI | GAGCTC | 1 cut(s) | 467 |
| Eco81I | CCTNAGG | 1 cut(s) | 500 |
| Eco88I | CYCGRG | 1 cut(s) | 482 |
| EcoICRI | GAGCTC | 1 cut(s) | 467 |
| EcoT14I | CCWWGG | 1 cut(s) | 444 |
| EcoT22I | ATGCAT | 1 cut(s) | 547 |
| EcoT38I | GRGCYC | 1 cut(s) | 469 |
| ErhI | CCWWGG | 1 cut(s) | 444 |
| FaeI | CATG | 3 cut(s) | 173, 209, 268 |
| FatI | CATG | 3 cut(s) | 169, 205, 264 |
| FblI | GTMKAC | 2 cut(s) | 202, 478 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| FokI | GGATG | 2 cut(s) | 395, 439 |
| FriOI | GRGCYC | 1 cut(s) | 469 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| GluI | GCNGC | 1 cut(s) | 228 |
| GsuI | CTGGAG | 1 cut(s) | 109 |
| HapII | CCGG | 1 cut(s) | 532 |
| Hin1II | CATG | 3 cut(s) | 173, 209, 268 |
| HinfI | GANTC | 1 cut(s) | 511 |
| HpaII | CCGG | 1 cut(s) | 532 |
| Hpy166II | GTNNAC | 3 cut(s) | 65, 203, 479 |
| Hpy188I | TCNGA | 2 cut(s) | 187, 282 |
| Hpy188III | TCNNGA | 6 cut(s) | 126, 272, 326, 425, 462, 499 |
| Hpy8I | GTNNAC | 3 cut(s) | 65, 203, 479 |
| HpyCH4III | ACNGT | 1 cut(s) | 69 |
| HpyCH4IV | ACGT | 2 cut(s) | 151, 222 |
| HpyCH4V | TGCA | 4 cut(s) | 333, 397, 525, 545 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 319 |
| HpyF3I | CTNAG | 3 cut(s) | 96, 460, 500 |
| HpySE526I | ACGT | 2 cut(s) | 151, 222 |
| Hsp92II | CATG | 3 cut(s) | 173, 209, 268 |
| Kzo9I | GATC | 1 cut(s) | 145 |
| LmnI | GCTCC | 6 cut(s) | 85, 217, 283, 318, 464, 472 |
| LpnPI | CCDG | 8 cut(s) | 33, 37, 139, 447, 469, 483, 512, 545 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| LweI | GCATC | 3 cut(s) | 265, 331, 461 |
| MaeII | ACGT | 2 cut(s) | 151, 222 |
| MalI | GATC | 1 cut(s) | 147 |
| MboI | GATC | 1 cut(s) | 145 |
| MboII | GAAGA | 1 cut(s) | 443 |
| MhlI | GDGCHC | 1 cut(s) | 469 |
| MmeI | TCCRAC | 2 cut(s) | 285, 346 |
| MnlI | CCTC | 3 cut(s) | 129, 362, 495 |
| Mph1103I | ATGCAT | 1 cut(s) | 547 |
| MseI | TTAA | 2 cut(s) | 117, 539 |
| MspI | CCGG | 1 cut(s) | 532 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 319 |
| NdeII | GATC | 1 cut(s) | 145 |
| NlaIII | CATG | 3 cut(s) | 173, 209, 268 |
| NsiI | ATGCAT | 1 cut(s) | 547 |
| NspI | RCATGY | 1 cut(s) | 209 |
| PaeR7I | CTCGAG | 1 cut(s) | 482 |
| PciI | ACATGT | 1 cut(s) | 205 |
| PfeI | GAWTC | 1 cut(s) | 511 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PscI | ACATGT | 1 cut(s) | 205 |
| PsiI | TTATAA | 1 cut(s) | 156 |
| Psp124BI | GAGCTC | 1 cut(s) | 469 |
| Psp1406I | AACGTT | 1 cut(s) | 151 |
| PspXI | VCTCGAGB | 1 cut(s) | 482 |
| RsaI | GTAC | 2 cut(s) | 5, 387 |
| RsaNI | GTAC | 2 cut(s) | 4, 386 |
| SacI | GAGCTC | 1 cut(s) | 469 |
| SaqAI | TTAA | 2 cut(s) | 117, 539 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 1 cut(s) | 145 |
| SduI | GDGCHC | 1 cut(s) | 469 |
| SetI | ASST | 9 cut(s) | 154, 214, 225, 229, 373, 440, 461, 469, 506 |
| SfaNI | GCATC | 3 cut(s) | 265, 331, 461 |
| Sfr274I | CTCGAG | 1 cut(s) | 482 |
| SlaI | CTCGAG | 1 cut(s) | 482 |
| SmlI | CTYRAG | 2 cut(s) | 7, 482 |
| SmoI | CTYRAG | 2 cut(s) | 7, 482 |
| SstI | GAGCTC | 1 cut(s) | 469 |
| StyI | CCWWGG | 1 cut(s) | 444 |
| TaaI | ACNGT | 1 cut(s) | 69 |
| TaiI | ACGT | 2 cut(s) | 154, 225 |
| TaqI | TCGA | 3 cut(s) | 273, 426, 483 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TfiI | GAWTC | 1 cut(s) | 511 |
| Tru1I | TTAA | 2 cut(s) | 117, 539 |
| Tru9I | TTAA | 2 cut(s) | 117, 539 |
| TscAI | CASTG | 1 cut(s) | 72 |
| TseI | GCWGC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 3 cut(s) | 249, 253, 444 |
| TspGWI | ACGGA | 2 cut(s) | 50, 305 |
| TspRI | CASTG | 1 cut(s) | 72 |
| XceI | RCATGY | 1 cut(s) | 209 |
| XhoI | CTCGAG | 1 cut(s) | 482 |
| XmiI | GTMKAC | 2 cut(s) | 202, 478 |
| Zsp2I | ATGCAT | 1 cut(s) | 547 |